Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000088

Physical Location & Seq

Genomic Coordinates Forward (+)

9642484 .. 9653539

Gene Structure 11056 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g15440.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

ATGTCGAGACGTTCATCGTCATCGTCGTCTGTTCTGGTTATTTTCCGGTGTGCTGCTGCCATCTGCTGCTGCTTCATCTTTGGCCTTACTGGTGTAACAGTAGCTCAGGCTCCCTCTCAAGCTCCTACATCTCAACCTCAAGCCACCACTGATCCATCTGAAGCGAAAGCTTTGAATTCAATATTTGCACAATGGGGGATTGAGGCCAATACGGAGCAATGGAACACAACTGGAGACCCATGTAGTGGAGCTGCCATTGACTCCACCGCATTCGGCGATGACGATCACAACCCTTTCATCAAATGCGAATGCTCGGATAATGTCACTTGCCACATTACCCAACTGAAAGTTTATGCTTTGGATGTTGATGGTGTACTTCCAGATGAGCTATGGACATTGAGCTACCTATCTAATCTGAAATTGGGTCAGAATTACTTCACAGGACCTCTCTCTGCATCCATTGGAAATCTAACTAGCATGCAATACTTGGACTTCGGGATTAATGCTTTATCGGGAGAGCTACCAAAGGAACTCGGAGAACTCACTGAATTGATTGTATTTGCTATTGGGACAAACAACTTTACTGGTCCTCTGCCAGCTGAACTAGGGAGTTTATCAAAATTACAAGAACTTTATCTTGATAGTTCTGGACTTAGCGGTGAGATTCCATCTACATTTGCCAATCTACAAAGCTTGCAGAAACTTTGGGCATCAGATGTTGAACTCTCTGGCAGTATACCTGACTTCATAGGAAATTTGTCAAAGCTTACTGACTTGAGGTTTCAAGGAAACTCCTTTGAAGGTCCCATACCATCTGCACTTTCCAATCTGACTTCTCTCACTAATCTGATAATTACAGACATATCTACTACCAATGGAACCTCTTCTCTTGGATTTATTATGGATATGAAGTCTCTATCTGTCTTAGTGCTAAGAAATAACAACATTTCTGATTCAATTCCTTCCAACATTGGAGAATACAAAAGTTTATATCAGCTGGACTTGAGCTTCAACAATCTAACTGGACAAATACCAGACTCGCTGTTTAATTTGAGTTCTCTTTCCATCCTGTTTCTTGGAAACAATAAGTTGAATGGCACTATCCCTGAATCTAAAAGCTCAAGTCTTCTCAATATAGATTTGTCATACAATAATCTGGTTGGGAGCATTCCTTCTTGGGTCAAAGGAACAAACTTGCAGCTGAATTTTGTTGCCAACAACTTCACCCTGGACAGTTCAAACAGCAGTGCTCTTCCTTCAGGGTTGAATTGCCTTCAAAGAGACTTTCCTTGCAATAGTGGTTCTGGAATCTTTTCTAACTTTGGGATAAAATGTGGGGGTCCTGAGATAACATCTTCCAGTAAGATTGTGTATCAGACAGAAAATGAGACCCTTGGTCCAGCTACATATTTTGTGAATGATGAAAGCAGATGGGCAGTTAGCAACGTTGGGTATTTCACTGGCAGCAACAACCCTCAGTACACAATTTTCTCCTCATCTCAATTCACAAACACTCTAGATTCTGAGCTATTCCAGACTGCAAGGCTCTCTGCCTCATCACTTAGATATTATGGCTTGGGGCTTGAGAATGGTAACTACACGGTGAACCTACAGTTTGCAGAACAAGCTATCCTAGATTCTACTACATGGAAAAGTCTTGGGAGACGTGTGTTCAATATTTATATCCAGGGGAATCTCGTTCTAAAGGATTTTGACATACGAAAGGAGGCAAGGGGATCTTTCCTAGCTGTTCAGAAGGAATACACGGTTCCGGTTTCAGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGAACTTGTTGTGTACCTGTACAGGGTACTTATGGACCTATTGTTTCAGCCATCAGTGCTACACCAGATTTCGAACCTACTGTCAGTAACAAAACTCCAACTAGTAAGAAGAATAGGACGGGTCTGATTGTGGGAATTGTTGTTGGTGGTGGAGTTTTAATTCTGGTGATGGTAGTTCTCTACATTGTTCGAAGAAGAAAAAGGCCCAACTTCAATGATGTCGAAGAGCTGTTAGGGATTGATATTGGACCGCTCACTTTCAGTTATTCCGAACTAAAGTCGGCTACAAATGACTTTAGTCCGGAAAACAAGCTTGGAGAGGGAGGATTTGGACCTGTCTATAAAGGTACCCTTAATGATGGAAGAGTAATTGCCGTGAAGCAATTGTCTGCAGCATCCCACCAAGGAAAGAGCCAATTTGTAACTGAGATTGCCACTATATCTGCCGTGCAACACAATAACCTTGTGACTTTGTATGGGTTCTGTGCTGAGGGAGTAAAAAGGCTCCTTGTCTATGAGTATCTGGAAAACAATAGTCTTGATCAAGCATTGTTTGGAAAGAACAATCTGAACCTTGATTGGTCAACACGATTTGACATATGCTTGGGAGTGGCTAGAGGTTTAACTTATCTTCATGAGGAATCAAGGCTTCGTATAGTTCATAGGGACGTGAAGGCCAGTAATATCCTGCTGGATTCTAATCTCATCCCCAAGATATCGGATTTTGGTTTGGCCAAGCTTTATGACAATAAAATGACCCACATAAGTACCGGGGTTGCTGGAACAATAGGGTATCTTGCACCGGAATATGCCATGCGTGGACATCTTACAGAAAAGACCGATGTGTTTGCATTCGGTGTTGTAGCTCTAGAAATTGTCAGTGGCAGGCCAAATTCTGACCCGAGTTTGGAAGAAGATAAGGTGTATCTTCTGGAATGGGCTTGGAACTTGCATGAGAACAACCATGAACTTGAACTGGTGGACTATAGATTATCCGAATTCAGCGAGGAAGAAGCAAAACGAATAATGAAGATAGGACTTTTGTGCACTCAAACATCTCCAATGCTGCGACCGACAATGTCTGGTGTTGTGGGAATGCTTACAGGAGCTATTGAAGTGAAAACAGCTGCTTCAAAACCCGGTTACTTGACTGACTTGAAATTCATTGATGTTACTGCCAGCAACATATCGCTTGGTATGTCAACCCAAGGAACTGATTCAAGCTTTTATAACTCATGTTCTAGTACAAGTATAGTAGGGGATGCGAGGCAAACACCTTCAAATGCCTCTCATCCCATTCTTCACGATACTGTTAATGATGGTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

1049

Amino Acids

113.83

Weight (kDa)

4.99

Isoelectric Point (pI)

35.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	441 - 624	1.8e-42	Malectin domain
Pkinase	PF00069	707 - 967	7.5e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	708 - 970	3.5e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca	FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica	MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica	Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis	pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis	RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata	RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora	Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa	Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha	Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana	Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3048
Acc65I	GGTACC	1 cut(s)	2165
AccB1I	GGYRCC	1 cut(s)	2165
AccB7I	CCANNNNNTGG	1 cut(s)	245
AccBSI	CCGCTC	1 cut(s)	2071
AccI	GTMKAC	1 cut(s)	736
AccIII	TCCGGA	1 cut(s)	2119
AciI	CCGC	3 cut(s)	267, 657, 2069
AclI	AACGTT	1 cut(s)	1446
AclWI	GGATC	2 cut(s)	146, 1744
AcoI	YGGCCR	1 cut(s)	2550
AcsI	RAATTY	6 cut(s)	175, 754, 1204, 2710, 2816, 2978
AcuI	CTGAAG	2 cut(s)	180, 1242
AfaI	GTAC	8 cut(s)	375, 1481, 1833, 1839, 1846, 2167, 2587, 3064
AfiI	CCNNNNNNNGG	3 cut(s)	245, 1841, 2725
AflIII	ACRYGT	1 cut(s)	1666
AhdI	GACNNNNNGTC	1 cut(s)	1395
AhlI	ACTAGT	1 cut(s)	1919
AjiI	CACGTC	2 cut(s)	1667, 2488
AjnI	CCWGG	2 cut(s)	1227, 1686
AjuI	GAANNNNNNNTTGG	2 cut(s)	2115, 2147
AloI	GAACNNNNNNTCC	2 cut(s)	1614, 1646
Alw21I	GWGCWC	2 cut(s)	1252, 2867
Alw26I	GTCTC	5 cut(s)	228, 918, 1275, 1382, 1657
Alw44I	GTGCAC	1 cut(s)	2863
AlwI	GGATC	2 cut(s)	146, 1744
Ama87I	CYCGRG	1 cut(s)	2719
Aor13HI	TCCGGA	1 cut(s)	2119
AoxI	GGCC	6 cut(s)	82, 204, 2021, 2493, 2550, 2705
ApaLI	GTGCAC	1 cut(s)	2863
ApoI	RAATTY	6 cut(s)	175, 754, 1204, 2710, 2816, 2978
ArsI	GACNNNNNNTTYG	2 cut(s)	1884, 1916
AseI	ATTAAT	1 cut(s)	501
Asp700I	GAANNNNTTC	4 cut(s)	434, 883, 1312, 3034
Asp718I	GGTACC	1 cut(s)	2165
AspS9I	GGNCC	9 cut(s)	443, 587, 803, 1340, 1397, 1853, 2022, 2066, 2150
AsuC2I	CCSGG	2 cut(s)	2590, 2958
AsuHPI	GGTGA	4 cut(s)	671, 1216, 1615, 1996
AsuII	TTCGAA	2 cut(s)	1890, 2008
AvaI	CYCGRG	1 cut(s)	2719
AvaII	GGWCC	8 cut(s)	443, 587, 803, 1340, 1397, 1853, 2066, 2150
BaeGI	GKGCMC	1 cut(s)	2867
BaeI	ACNNNNGTAYC	2 cut(s)	2569, 2602
BalI	TGGCCA	1 cut(s)	2552
BanI	GGYRCC	1 cut(s)	2165
BarI	GAAGNNNNNNTAC	2 cut(s)	792, 824
BbsI	GAAGAC	1 cut(s)	1118
Bbv12I	GWGCWC	2 cut(s)	1252, 2867
BbvCI	CCTCAGC	1 cut(s)	2307
BceAI	ACGGC	2 cut(s)	2177, 2249
BcgI	CGANNNNNNTGC	2 cut(s)	2648, 2682
BciT130I	CCWGG	2 cut(s)	1229, 1688
BclI	TGATCA	1 cut(s)	2359
BcnI	CCSGG	2 cut(s)	2590, 2958
BcoDI	GTCTC	5 cut(s)	228, 918, 1275, 1382, 1657
BcuI	ACTAGT	1 cut(s)	1919
BfaI	CTAG	9 cut(s)	474, 605, 1517, 1634, 1745, 1920, 2433, 2687, 3060
BfmI	CTRYAG	3 cut(s)	1610, 2208, 2803
Bme1390I	CCNGG	4 cut(s)	1229, 1688, 2590, 2958
Bme18I	GGWCC	8 cut(s)	443, 587, 803, 1340, 1397, 1853, 2066, 2150
BmeRI	GACNNNNNGTC	1 cut(s)	1395
BmeT110I	CYCGRG	1 cut(s)	2719
BmgBI	CACGTC	2 cut(s)	1667, 2488
BmgT120I	GGNCC	9 cut(s)	443, 587, 803, 1340, 1397, 1853, 2022, 2066, 2150
BmiI	GGNNCC	7 cut(s)	111, 805, 880, 1341, 1770, 2167, 2324
BmrFI	CCNGG	4 cut(s)	1229, 1688, 2590, 2958
BmsI	GCATC	4 cut(s)	464, 719, 2222, 3070
BoxI	GACNNNNGTC	1 cut(s)	2115
BpiI	GAAGAC	1 cut(s)	1118
BpmI	CTGGAG	1 cut(s)	252
Bpu10I	CCTNAGC	2 cut(s)	105, 2307
Bpu14I	TTCGAA	2 cut(s)	1890, 2008
BpuEI	CTTGAG	6 cut(s)	102, 123, 796, 1024, 1105, 1604
BpuMI	CCSGG	2 cut(s)	2590, 2958
BsaBI	GATNNNNATC	2 cut(s)	282, 2517
BsaI	GGTCTC	2 cut(s)	228, 1382
BsaJI	CCNNGG	6 cut(s)	1227, 1393, 1687, 2221, 2589, 3025
BsaWI	WCCGGW	4 cut(s)	45, 1771, 2119, 2620
Bsc4I	CCNNNNNNNGG	3 cut(s)	245, 1841, 2725
Bse1I	ACTGG	8 cut(s)	94, 235, 589, 1027, 1359, 1465, 2496, 2799
Bse3DI	GCAATG	1 cut(s)	224
Bse8I	GATNNNNATC	2 cut(s)	282, 2517
BseAI	TCCGGA	1 cut(s)	2119
BseBI	CCWGG	2 cut(s)	1229, 1688
BseDI	CCNNGG	6 cut(s)	1227, 1393, 1687, 2221, 2589, 3025
BseGI	GGATG	7 cut(s)	367, 455, 1065, 2213, 2523, 3085, 3109
BseJI	GATNNNNATC	2 cut(s)	282, 2517
BseLI	CCNNNNNNNGG	3 cut(s)	245, 1841, 2725
BseMI	GCAATG	1 cut(s)	224
BseMII	CTCAG	6 cut(s)	119, 1335, 1490, 1515, 2235, 2298
BseNI	ACTGG	8 cut(s)	94, 235, 589, 1027, 1359, 1465, 2496, 2799
BseRI	GAGGAG	1 cut(s)	1483
BseSI	GKGCMC	1 cut(s)	2867
BsgI	GTGCAG	1 cut(s)	801
Bsh1285I	CGRYCG	1 cut(s)	2891
BshFI	GGCC	6 cut(s)	84, 206, 2023, 2495, 2552, 2707
BshNI	GGYRCC	1 cut(s)	2165
BsiEI	CGRYCG	1 cut(s)	2891
BsiHKAI	GWGCWC	2 cut(s)	1252, 2867
BsiHKCI	CYCGRG	1 cut(s)	2719
BsiSI	CCGG	6 cut(s)	46, 1772, 2120, 2589, 2621, 2958
BslFI	GGGAC	3 cut(s)	583, 789, 2498
BslI	CCNNNNNNNGG	3 cut(s)	245, 1841, 2725
BsmAI	GTCTC	5 cut(s)	228, 918, 1275, 1382, 1657
BsmBI	CGTCTC	1 cut(s)	1657
BsmFI	GGGAC	3 cut(s)	583, 789, 2498
BsmI	GAATGC	5 cut(s)	269, 314, 1167, 2669, 2919
BsnI	GGCC	6 cut(s)	84, 206, 2023, 2495, 2552, 2707
Bso31I	GGTCTC	2 cut(s)	228, 1382
BsoBI	CYCGRG	1 cut(s)	2719
Bsp119I	TTCGAA	2 cut(s)	1890, 2008
Bsp1286I	GDGCHC	2 cut(s)	1252, 2867
Bsp13I	TCCGGA	1 cut(s)	2119
Bsp1407I	TGTACA	1 cut(s)	1837
Bsp143I	GATC	4 cut(s)	151, 283, 1736, 2359
BspACI	CCGC	3 cut(s)	267, 657, 2069
BspANI	GGCC	6 cut(s)	84, 206, 2023, 2495, 2552, 2707
BspCNI	CTCAG	6 cut(s)	118, 1336, 1489, 1516, 2236, 2299
BspEI	TCCGGA	1 cut(s)	2119
BspHI	TCATGA	1 cut(s)	2452
BspLI	GGNNCC	7 cut(s)	111, 805, 880, 1341, 1770, 2167, 2324
BspMAI	CTGCAG	1 cut(s)	2212
BspPI	GGATC	2 cut(s)	146, 1744
BspQI	GCTCTTC	2 cut(s)	1257, 2037
BspT104I	TTCGAA	2 cut(s)	1890, 2008
BspT107I	GGYRCC	1 cut(s)	2165
BspTNI	GGTCTC	2 cut(s)	228, 1382
BsrBI	CCGCTC	1 cut(s)	2071
BsrDI	GCAATG	1 cut(s)	224
BsrGI	TGTACA	1 cut(s)	1837
BsrI	ACTGG	8 cut(s)	94, 235, 589, 1027, 1359, 1465, 2496, 2799
BssECI	CCNNGG	6 cut(s)	1227, 1393, 1687, 2221, 2589, 3025
BssMI	GATC	4 cut(s)	151, 283, 1736, 2359
BssNAI	GTATAC	1 cut(s)	737
BssT1I	CCWWGG	3 cut(s)	1393, 2221, 3025
Bst1107I	GTATAC	1 cut(s)	737
Bst2UI	CCWGG	2 cut(s)	1229, 1688
Bst4CI	ACNGT	7 cut(s)	100, 1235, 1603, 1614, 1768, 1900, 3130
Bst6I	CTCTTC	4 cut(s)	889, 1257, 2037, 2176
BstAUI	TGTACA	1 cut(s)	1837
BstBI	TTCGAA	2 cut(s)	1890, 2008
BstC8I	GCNNGC	5 cut(s)	479, 597, 695, 2705, 2998
BstF5I	GGATG	7 cut(s)	367, 455, 1065, 2213, 2523, 3085, 3109
BstKTI	GATC	4 cut(s)	154, 286, 1739, 2362
BstMAI	GTCTC	5 cut(s)	228, 918, 1275, 1382, 1657
BstMBI	GATC	4 cut(s)	151, 283, 1736, 2359
BstMCI	CGRYCG	1 cut(s)	2891
BstMWI	GCNNNNNNNGC	2 cut(s)	1625, 1874
BstNI	CCWGG	2 cut(s)	1229, 1688
BstNSI	RCATGY	1 cut(s)	481
BstPAI	GACNNNNGTC	1 cut(s)	2115
BstSCI	CCNGG	4 cut(s)	1227, 1686, 2588, 2956
BstSFI	CTRYAG	3 cut(s)	1610, 2208, 2803
BstSLI	GKGCMC	1 cut(s)	2867
BstV2I	GAAGAC	1 cut(s)	1118
BstX2I	RGATCY	1 cut(s)	1736
BstYI	RGATCY	1 cut(s)	1736
BstZ17I	GTATAC	1 cut(s)	737
BsuRI	GGCC	6 cut(s)	84, 206, 2023, 2495, 2552, 2707
BtgZI	GCGATG	1 cut(s)	291
BtrI	CACGTC	2 cut(s)	1667, 2488
BtsCI	GGATG	7 cut(s)	367, 455, 1065, 2213, 2523, 3085, 3109
BtsI	GCAGTG	1 cut(s)	1252
BtsIMutI	CAGTG	6 cut(s)	147, 543, 1252, 1458, 1879, 2704
Cac8I	GCNNGC	5 cut(s)	479, 597, 695, 2705, 2998
CciI	TCATGA	1 cut(s)	2452
Cfr13I	GGNCC	9 cut(s)	443, 587, 803, 1340, 1397, 1853, 2022, 2066, 2150
Csp6I	GTAC	8 cut(s)	374, 1480, 1832, 1838, 1845, 2166, 2586, 3063
CviAII	CATG	8 cut(s)	240, 478, 1647, 2453, 2632, 2771, 2783, 3054
CviQI	GTAC	8 cut(s)	374, 1480, 1832, 1838, 1845, 2166, 2586, 3063
DpnI	GATC	4 cut(s)	153, 285, 1738, 2361
DpnII	GATC	4 cut(s)	151, 283, 1736, 2359
DriI	GACNNNNNGTC	1 cut(s)	1395
EaeI	YGGCCR	1 cut(s)	2550
Eam1104I	CTCTTC	4 cut(s)	889, 1257, 2037, 2176
Eam1105I	GACNNNNNGTC	1 cut(s)	1395
EarI	CTCTTC	4 cut(s)	889, 1257, 2037, 2176
Eco130I	CCWWGG	3 cut(s)	1393, 2221, 3025
Eco31I	GGTCTC	2 cut(s)	228, 1382
Eco32I	GATATC	1 cut(s)	2535
Eco47I	GGWCC	8 cut(s)	443, 587, 803, 1340, 1397, 1853, 2066, 2150
Eco57I	CTGAAG	2 cut(s)	180, 1242
Eco88I	CYCGRG	1 cut(s)	2719
EcoO109I	RGGNCCY	3 cut(s)	443, 803, 1340
EcoRI	GAATTC	2 cut(s)	175, 2816
EcoRII	CCWGG	2 cut(s)	1227, 1686
EcoRV	GATATC	1 cut(s)	2535
EcoT14I	CCWWGG	3 cut(s)	1393, 2221, 3025
ErhI	CCWWGG	3 cut(s)	1393, 2221, 3025
Esp3I	CGTCTC	1 cut(s)	1657
FaeI	CATG	8 cut(s)	243, 481, 1650, 2456, 2635, 2774, 2786, 3057
FalI	AAGNNNNNCTT	4 cut(s)	1723, 1755, 2154, 2186
FaqI	GGGAC	3 cut(s)	583, 789, 2498
FatI	CATG	8 cut(s)	239, 477, 1646, 2452, 2631, 2770, 2782, 3053
FauNDI	CATATG	1 cut(s)	2417
FbaI	TGATCA	1 cut(s)	2359
FblI	GTMKAC	1 cut(s)	736
FokI	GGATG	7 cut(s)	374, 442, 1052, 2200, 2510, 3092, 3096
FspBI	CTAG	9 cut(s)	474, 605, 1517, 1634, 1745, 1920, 2433, 2687, 3060
GsuI	CTGGAG	1 cut(s)	252
HaeIII	GGCC	6 cut(s)	84, 206, 2023, 2495, 2552, 2707
HapII	CCGG	6 cut(s)	46, 1772, 2120, 2589, 2621, 2958
Hin1II	CATG	8 cut(s)	243, 481, 1650, 2456, 2635, 2774, 2786, 3057
HincII	GTYRAC	2 cut(s)	2403, 3021
HindII	GTYRAC	2 cut(s)	2403, 3021
HindIII	AAGCTT	6 cut(s)	168, 691, 764, 2129, 2555, 3040
HpaII	CCGG	6 cut(s)	46, 1772, 2120, 2589, 2621, 2958
HphI	GGTGA	4 cut(s)	671, 1216, 1615, 1996
Hpy99I	CGWCG	1 cut(s)	28
HpyAV	CCTTC	8 cut(s)	794, 972, 1182, 1266, 1283, 1750, 2485, 3105
HpyCH4III	ACNGT	7 cut(s)	100, 1235, 1603, 1614, 1768, 1900, 3130
HpyCH4IV	ACGT	4 cut(s)	10, 1446, 1666, 2487
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1625, 1874
HpySE526I	ACGT	4 cut(s)	10, 1446, 1666, 2487
Hsp92II	CATG	8 cut(s)	243, 481, 1650, 2456, 2635, 2774, 2786, 3057
Kpn2I	TCCGGA	1 cut(s)	2119
KpnI	GGTACC	1 cut(s)	2169
Ksp22I	TGATCA	1 cut(s)	2359
Kzo9I	GATC	4 cut(s)	151, 283, 1736, 2359
LguI	GCTCTTC	2 cut(s)	1257, 2037
LmnI	GCTCC	7 cut(s)	115, 127, 214, 248, 1164, 2328, 2924
LweI	GCATC	4 cut(s)	464, 719, 2222, 3070
MaeI	CTAG	9 cut(s)	474, 605, 1517, 1634, 1745, 1920, 2433, 2687, 3060
MaeII	ACGT	4 cut(s)	10, 1446, 1666, 2487
MaeIII	GTNAC	8 cut(s)	94, 322, 1592, 1904, 2239, 2284, 2960, 2989
MalI	GATC	4 cut(s)	153, 285, 1738, 2361
MbiI	CCGCTC	1 cut(s)	2071
MboI	GATC	4 cut(s)	151, 283, 1736, 2359
MfeI	CAATTG	1 cut(s)	2201
MflI	RGATCY	1 cut(s)	1736
MhlI	GDGCHC	2 cut(s)	1252, 2867
MlsI	TGGCCA	1 cut(s)	2552
MluNI	TGGCCA	1 cut(s)	2552
MlyI	GAGTC	2 cut(s)	254, 1031
MmeI	TCCRAC	2 cut(s)	990, 1940
Mox20I	TGGCCA	1 cut(s)	2552
MroI	TCCGGA	1 cut(s)	2119
MroXI	GAANNNNTTC	4 cut(s)	434, 883, 1312, 3034
MscI	TGGCCA	1 cut(s)	2552
MseI	TTAA	6 cut(s)	501, 1047, 1976, 2172, 2441, 3132
Msp20I	TGGCCA	1 cut(s)	2552
MspA1I	CMGCKG	4 cut(s)	599, 997, 1201, 2945
MspI	CCGG	6 cut(s)	46, 1772, 2120, 2589, 2621, 2958
MspR9I	CCNGG	4 cut(s)	1229, 1688, 2590, 2958
MunI	CAATTG	1 cut(s)	2201
Mva1269I	GAATGC	5 cut(s)	269, 314, 1167, 2669, 2919
MvaI	CCWGG	2 cut(s)	1229, 1688
MwoI	GCNNNNNNNGC	2 cut(s)	1625, 1874
NciI	CCSGG	2 cut(s)	2590, 2958
NdeI	CATATG	1 cut(s)	2417
NdeII	GATC	4 cut(s)	151, 283, 1736, 2359
NlaIII	CATG	8 cut(s)	243, 481, 1650, 2456, 2635, 2774, 2786, 3057
NlaIV	GGNNCC	7 cut(s)	111, 805, 880, 1341, 1770, 2167, 2324
NmuCI	GTSAC	2 cut(s)	322, 2284
NspI	RCATGY	1 cut(s)	481
NspV	TTCGAA	2 cut(s)	1890, 2008
PaeI	GCATGC	1 cut(s)	481
PagI	TCATGA	1 cut(s)	2452
PciSI	GCTCTTC	2 cut(s)	1257, 2037
PcsI	WCGNNNNNNNCGW	2 cut(s)	23, 279
PctI	GAATGC	5 cut(s)	269, 314, 1167, 2669, 2919
PdmI	GAANNNNTTC	4 cut(s)	434, 883, 1312, 3034
PflFI	GACNNNGTC	1 cut(s)	2896
PflMI	CCANNNNNTGG	1 cut(s)	245
PleI	GAGTC	2 cut(s)	254, 1031
PpsI	GAGTC	2 cut(s)	254, 1031
PpuMI	RGGWCCY	3 cut(s)	443, 803, 1340
PshAI	GACNNNNGTC	1 cut(s)	2115
PshBI	ATTAAT	1 cut(s)	501
PsiI	TTATAA	1 cut(s)	3048
Psp1406I	AACGTT	1 cut(s)	1446
Psp5II	RGGWCCY	3 cut(s)	443, 803, 1340
Psp6I	CCWGG	2 cut(s)	1227, 1686
PspGI	CCWGG	2 cut(s)	1227, 1686
PspN4I	GGNNCC	7 cut(s)	111, 805, 880, 1341, 1770, 2167, 2324
PspPI	GGNCC	9 cut(s)	443, 587, 803, 1340, 1397, 1853, 2022, 2066, 2150
PspPPI	RGGWCCY	3 cut(s)	443, 803, 1340
PstI	CTGCAG	1 cut(s)	2212
PsuI	RGATCY	1 cut(s)	1736
PsyI	GACNNNGTC	1 cut(s)	2896
PvuII	CAGCTG	4 cut(s)	599, 997, 1201, 2945
RsaI	GTAC	8 cut(s)	375, 1481, 1833, 1839, 1846, 2167, 2587, 3064
RsaNI	GTAC	8 cut(s)	374, 1480, 1832, 1838, 1845, 2166, 2586, 3063
SapI	GCTCTTC	2 cut(s)	1257, 2037
SaqAI	TTAA	6 cut(s)	501, 1047, 1976, 2172, 2441, 3132
Sau3AI	GATC	4 cut(s)	151, 283, 1736, 2359
Sau96I	GGNCC	9 cut(s)	443, 587, 803, 1340, 1397, 1853, 2022, 2066, 2150
SchI	GAGTC	2 cut(s)	254, 1031
ScrFI	CCNGG	4 cut(s)	1229, 1688, 2590, 2958
SduI	GDGCHC	2 cut(s)	1252, 2867
SfaNI	GCATC	4 cut(s)	464, 719, 2222, 3070
SfcI	CTRYAG	3 cut(s)	1610, 2208, 2803
SfuI	TTCGAA	2 cut(s)	1890, 2008
SinI	GGWCC	8 cut(s)	443, 587, 803, 1340, 1397, 1853, 2066, 2150
SmlI	CTYRAG	6 cut(s)	117, 138, 775, 1003, 1120, 1583
SmoI	CTYRAG	6 cut(s)	117, 138, 775, 1003, 1120, 1583
SpeI	ACTAGT	1 cut(s)	1919
SphI	GCATGC	1 cut(s)	481
SsiI	CCGC	3 cut(s)	267, 657, 2069
SspI	AATATT	2 cut(s)	183, 1678
SspMI	CTAG	9 cut(s)	474, 605, 1517, 1634, 1745, 1920, 2433, 2687, 3060
StyD4I	CCNGG	4 cut(s)	1227, 1686, 2588, 2956
StyI	CCWWGG	3 cut(s)	1393, 2221, 3025
TaaI	ACNGT	7 cut(s)	100, 1235, 1603, 1614, 1768, 1900, 3130
TaiI	ACGT	4 cut(s)	13, 1449, 1669, 2490
TaqI	TCGA	4 cut(s)	5, 1890, 2008, 2040
TaqII	GACCGA	2 cut(s)	2672, 2905
TatI	WGTACW	4 cut(s)	373, 1479, 1837, 3062
Tru1I	TTAA	6 cut(s)	501, 1047, 1976, 2172, 2441, 3132
Tru9I	TTAA	6 cut(s)	501, 1047, 1976, 2172, 2441, 3132
TscAI	CASTG	6 cut(s)	154, 550, 1252, 1465, 1879, 2704
TseFI	GTSAC	2 cut(s)	322, 2284
Tsp45I	GTSAC	2 cut(s)	322, 2284
TspGWI	ACGGA	1 cut(s)	227
TspRI	CASTG	6 cut(s)	154, 550, 1252, 1465, 1879, 2704
Tth111I	GACNNNGTC	1 cut(s)	2896
Van91I	CCANNNNNTGG	1 cut(s)	245
VneI	GTGCAC	1 cut(s)	2863
VpaK11BI	GGWCC	8 cut(s)	443, 587, 803, 1340, 1397, 1853, 2066, 2150
VspI	ATTAAT	1 cut(s)	501
XapI	RAATTY	6 cut(s)	175, 754, 1204, 2710, 2816, 2978
XbaI	TCTAGA	2 cut(s)	1516, 2686
XceI	RCATGY	1 cut(s)	481
XcmI	CCANNNNNNNNNTGG	1 cut(s)	387
XmiI	GTMKAC	1 cut(s)	736
XmnI	GAANNNNTTC	4 cut(s)	434, 883, 1312, 3034
XspI	CTAG	9 cut(s)	474, 605, 1517, 1634, 1745, 1920, 2433, 2687, 3060

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.