pycom05g24110

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
25689901 .. 25690505
605 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g24110.2

Sequence Viewer

Length: 459 bp
ATGACCCCCCCCCGCATCGGTGCACAAGACCCTTGCACAAGTCACCGGAACAAATGTGACCCCGGCGCTTTACCAGACTTCAAGAATGTCCACAGGATCACTAAGATCATAGACTATGGCCTGGGCCTTGTGAATGGGCCCTACACTGTAACATTGCACTTTGCAGAGACGGTTTATGAAAGTCGGATTTCGCATACTTCGCAAAGTCTTGGACGGCGTGTATTTGATATCTATATTCAGGGTACCCGCATGACGAAGGACTTTGACATATCGAAGGAGGCAGGTGGTGTTAACCAAGCAGTTGTGAGAAAATTTAATGTTAACGTGTCAGAGAGTTATCTTGAAATTCATCTGTTCTGGGCTGGTAAAGGGACTTGTTGCATACCCAATTATGGTGATTACGGCCCACTAATAGCAGCTATCCATGCTACTTCAGGTATAGTATGTGTTAACTTATAG

Protein Analysis

153

Amino Acids

16.76

Weight (kDa)

8.29

Isoelectric Point (pI)

20.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 272
Acc36I ACCTGC 1 cut(s) 272
Acc65I GGTACC 1 cut(s) 242
AccB1I GGYRCC 1 cut(s) 242
AciI CCGC 2 cut(s) 13, 247
AclWI GGATC 1 cut(s) 104
AcsI RAATTY 2 cut(s) 311, 345
AcuI CTGAAG 1 cut(s) 417
AfaI GTAC 1 cut(s) 244
AfiI CCNNNNNNNGG 2 cut(s) 17, 392
AflIII ACRYGT 1 cut(s) 324
AgsI TTSAA 2 cut(s) 82, 344
AjnI CCWGG 1 cut(s) 120
AluBI AGCT 1 cut(s) 419
AluI AGCT 1 cut(s) 419
Alw21I GWGCWC 1 cut(s) 25
Alw26I GTCTC 1 cut(s) 161
Alw44I GTGCAC 1 cut(s) 21
AlwI GGATC 1 cut(s) 104
AoxI GGCC 4 cut(s) 118, 124, 137, 403
ApaI GGGCCC 1 cut(s) 141
ApaLI GTGCAC 1 cut(s) 21
ApeKI GCWGC 1 cut(s) 416
ApoI RAATTY 2 cut(s) 311, 345
Asp718I GGTACC 1 cut(s) 242
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 4 cut(s) 124, 137, 138, 404
AsuC2I CCSGG 1 cut(s) 63
AsuHPI GGTGA 2 cut(s) 35, 407
BaeGI GKGCMC 2 cut(s) 25, 141
BanI GGYRCC 1 cut(s) 242
BanII GRGCYC 1 cut(s) 141
Bbv12I GWGCWC 1 cut(s) 25
BbvI GCAGC 1 cut(s) 428
BceAI ACGGC 2 cut(s) 230, 418
BciT130I CCWGG 1 cut(s) 122
BcnI CCSGG 1 cut(s) 63
BcoDI GTCTC 1 cut(s) 161
BfoI RGCGCY 1 cut(s) 69
BfuAI ACCTGC 1 cut(s) 272
BisI GCNGC 1 cut(s) 417
BlsI GCNGC 1 cut(s) 418
Bme1390I CCNGG 2 cut(s) 63, 122
BmgT120I GGNCC 4 cut(s) 124, 137, 138, 404
BmiI GGNNCC 2 cut(s) 139, 244
BmrFI CCNGG 2 cut(s) 63, 122
BmsI GCATC 1 cut(s) 24
BpuMI CCSGG 1 cut(s) 63
BsaJI CCNNGG 2 cut(s) 61, 121
BsaWI WCCGGW 1 cut(s) 45
Bsc4I CCNNNNNNNGG 2 cut(s) 17, 392
Bse3DI GCAATG 1 cut(s) 152
BseBI CCWGG 1 cut(s) 122
BseDI CCNNGG 2 cut(s) 61, 121
BseLI CCNNNNNNNGG 2 cut(s) 17, 392
BseMI GCAATG 1 cut(s) 152
BseSI GKGCMC 2 cut(s) 25, 141
BseXI GCAGC 1 cut(s) 428
BshFI GGCC 4 cut(s) 120, 126, 139, 405
BshNI GGYRCC 1 cut(s) 242
BsiHKAI GWGCWC 1 cut(s) 25
BsiSI CCGG 2 cut(s) 46, 63
BslFI GGGAC 1 cut(s) 385
BslI CCNNNNNNNGG 2 cut(s) 17, 392
BsmAI GTCTC 1 cut(s) 161
BsmBI CGTCTC 1 cut(s) 161
BsmFI GGGAC 1 cut(s) 385
BsnI GGCC 4 cut(s) 120, 126, 139, 405
Bsp120I GGGCCC 1 cut(s) 137
Bsp1286I GDGCHC 2 cut(s) 25, 141
Bsp143I GATC 2 cut(s) 96, 105
BspACI CCGC 2 cut(s) 13, 247
BspANI GGCC 4 cut(s) 120, 126, 139, 405
BspLI GGNNCC 2 cut(s) 139, 244
BspMI ACCTGC 1 cut(s) 272
BspPI GGATC 1 cut(s) 104
BspT107I GGYRCC 1 cut(s) 242
BsrDI GCAATG 1 cut(s) 152
BssECI CCNNGG 2 cut(s) 61, 121
BssMI GATC 2 cut(s) 96, 105
Bst2UI CCWGG 1 cut(s) 122
Bst4CI ACNGT 2 cut(s) 148, 172
BstDEI CTNAG 1 cut(s) 102
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstKTI GATC 2 cut(s) 99, 108
BstMAI GTCTC 1 cut(s) 161
BstMBI GATC 2 cut(s) 96, 105
BstMWI GCNNNNNNNGC 2 cut(s) 199, 425
BstNI CCWGG 1 cut(s) 122
BstSCI CCNGG 2 cut(s) 61, 120
BstSLI GKGCMC 2 cut(s) 25, 141
BstV1I GCAGC 1 cut(s) 428
BsuRI GGCC 4 cut(s) 120, 126, 139, 405
BtsIMutI CAGTG 1 cut(s) 144
BveI ACCTGC 1 cut(s) 272
CfoI GCGC 1 cut(s) 68
Cfr13I GGNCC 4 cut(s) 124, 137, 138, 404
Csp6I GTAC 1 cut(s) 243
CviAII CATG 2 cut(s) 250, 425
CviJI RGCY 6 cut(s) 120, 126, 139, 362, 405, 419
CviKI_1 RGCY 6 cut(s) 120, 126, 139, 362, 405, 419
CviQI GTAC 1 cut(s) 243
DdeI CTNAG 1 cut(s) 102
DpnI GATC 2 cut(s) 98, 107
DpnII GATC 2 cut(s) 96, 105
Eco24I GRGCYC 1 cut(s) 141
Eco32I GATATC 1 cut(s) 229
Eco57I CTGAAG 1 cut(s) 417
EcoO109I RGGNCCY 1 cut(s) 138
EcoRII CCWGG 1 cut(s) 120
EcoRV GATATC 1 cut(s) 229
EcoT38I GRGCYC 1 cut(s) 141
Esp3I CGTCTC 1 cut(s) 161
FaeI CATG 2 cut(s) 253, 428
FaqI GGGAC 1 cut(s) 385
FatI CATG 2 cut(s) 249, 424
FauI CCCGC 2 cut(s) 20, 254
Fnu4HI GCNGC 1 cut(s) 417
FriOI GRGCYC 1 cut(s) 141
Fsp4HI GCNGC 1 cut(s) 417
GlaI GCGC 1 cut(s) 67
GluI GCNGC 1 cut(s) 417
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 4 cut(s) 120, 126, 139, 405
HapII CCGG 2 cut(s) 46, 63
HhaI GCGC 1 cut(s) 68
Hin1II CATG 2 cut(s) 253, 428
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HincII GTYRAC 3 cut(s) 292, 322, 451
HindII GTYRAC 3 cut(s) 292, 322, 451
HpaI GTTAAC 3 cut(s) 292, 322, 451
HpaII CCGG 2 cut(s) 46, 63
HphI GGTGA 2 cut(s) 35, 407
Hpy166II GTNNAC 5 cut(s) 23, 91, 292, 322, 451
Hpy188I TCNGA 2 cut(s) 186, 331
Hpy188III TCNNGA 2 cut(s) 82, 341
Hpy8I GTNNAC 5 cut(s) 23, 91, 292, 322, 451
HpyAV CCTTC 2 cut(s) 250, 268
HpyCH4III ACNGT 2 cut(s) 148, 172
HpyCH4IV ACGT 1 cut(s) 324
HpyCH4V TGCA 5 cut(s) 23, 36, 157, 164, 381
HpyF10VI GCNNNNNNNGC 2 cut(s) 199, 425
HpyF3I CTNAG 1 cut(s) 102
HpySE526I ACGT 1 cut(s) 324
Hsp92II CATG 2 cut(s) 253, 428
HspAI GCGC 1 cut(s) 66
KpnI GGTACC 1 cut(s) 246
KspAI GTTAAC 3 cut(s) 292, 322, 451
Kzo9I GATC 2 cut(s) 96, 105
Lsp1109I GCAGC 1 cut(s) 428
LweI GCATC 1 cut(s) 24
MaeII ACGT 1 cut(s) 324
MaeIII GTNAC 3 cut(s) 41, 56, 148
MalI GATC 2 cut(s) 98, 107
MboI GATC 2 cut(s) 96, 105
MhlI GDGCHC 2 cut(s) 25, 141
MluCI AATT 3 cut(s) 311, 345, 388
MmeI TCCRAC 1 cut(s) 164
MnlI CCTC 1 cut(s) 271
MseI TTAA 4 cut(s) 291, 315, 321, 450
MspI CCGG 2 cut(s) 46, 63
MspR9I CCNGG 2 cut(s) 63, 122
MvaI CCWGG 1 cut(s) 122
MwoI GCNNNNNNNGC 2 cut(s) 199, 425
NciI CCSGG 1 cut(s) 63
NdeII GATC 2 cut(s) 96, 105
NlaIII CATG 2 cut(s) 253, 428
NlaIV GGNNCC 2 cut(s) 139, 244
NmuCI GTSAC 2 cut(s) 41, 56
PaqCI CACCTGC 1 cut(s) 272
PkrI GCNGC 1 cut(s) 418
Psp6I CCWGG 1 cut(s) 120
PspGI CCWGG 1 cut(s) 120
PspN4I GGNNCC 2 cut(s) 139, 244
PspOMI GGGCCC 1 cut(s) 137
PspPI GGNCC 4 cut(s) 124, 137, 138, 404
RsaI GTAC 1 cut(s) 244
RsaNI GTAC 1 cut(s) 243
SaqAI TTAA 4 cut(s) 291, 315, 321, 450
SatI GCNGC 1 cut(s) 417
Sau3AI GATC 2 cut(s) 96, 105
Sau96I GGNCC 4 cut(s) 124, 137, 138, 404
ScrFI CCNGG 2 cut(s) 63, 122
SduI GDGCHC 2 cut(s) 25, 141
SetI ASST 4 cut(s) 286, 327, 421, 439
SfaNI GCATC 1 cut(s) 24
Sse9I AATT 3 cut(s) 311, 345, 388
SsiI CCGC 2 cut(s) 13, 247
StyD4I CCNGG 2 cut(s) 61, 120
TaaI ACNGT 2 cut(s) 148, 172
TaiI ACGT 1 cut(s) 327
TaqI TCGA 1 cut(s) 272
TasI AATT 3 cut(s) 311, 345, 388
Tru1I TTAA 4 cut(s) 291, 315, 321, 450
Tru9I TTAA 4 cut(s) 291, 315, 321, 450
TscAI CASTG 1 cut(s) 151
TseFI GTSAC 2 cut(s) 41, 56
TseI GCWGC 1 cut(s) 416
Tsp45I GTSAC 2 cut(s) 41, 56
TspDTI ATGAA 2 cut(s) 192, 338
TspRI CASTG 1 cut(s) 151
VneI GTGCAC 1 cut(s) 21
XapI RAATTY 2 cut(s) 311, 345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.