RLG00000018124
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
25544889 .. 25554771
9883 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018124

Sequence Viewer

Length: 2268 bp
ATGTTCACCTCGTGCCAGGTCTACCTGAAGAACAAGTCTTCGTACGGTCCGCACAAGCTCAAGTTTCTGCTCCTGCTCCGCAACCTCAAGCTACTAATGCCACCACTGACCCATCTCAAGGTTTCAATCCTTGTAATTGGTGTTGCAGCAAGAGTTTTGAATTCAGTGTTTGAGAAATGGAATATTCGGGCCAATCCGAAGCAATGGAACACAACCGGAGACCCATGCAGTGGAGCTGCCATAGACTCCACCAGCGAGATACCAAAAGAACTTGGACAACTTACTGAACTGAGATCATTGGCTTTTGGGAGAAACAACTTTTCGGGTTCTCTGCCATCTGAGCTAGGGAATTTAATCAAATTACAACAGCTTTACGTTGATAGTTGTGGAGTTAGCAGTGAGATTCCACCAACATTTGCTGATCTACAAAACTTGGAGATTTTTTCGGCTAGAAACGTTGAACTCTCTGGCAGGATACCATACTTCATAGGGAATTGGTCAAAGCTTACTACCTTGAGGTTTCAAGGAAACTCTTTCGAAGGTCCTATACCATTTGAATTTTCCAATCTGACTTCTATGAAAGAACTACGCATTAGTGATTTGTCAAATGCCAATGGGAGCTCTTCTCTTGCATTTATTGAGAATATGAAGGCTCTAAATATCTTAGAGCTGAGGAATAACAATATTTCTGATTCAATTCCTTCCGATTTTGGAGTATACCAAAGACCTGAGATTACGTCTTCCTCCGATGGGATTGTGTATGAGAAGGAAAATGAGCCCCTTGGACCAGCTTCATATTTTGTGACTGGCACAACCAGATGGGGAGTTAGCAATGTCGGATATTTCGCTGGCAGTACCAATCCTCAGTATACAAGTTTCTCCTTATCTCAATTCACAAATACTTTTGATTCTGTGCTATTCCAGACTGCAAGGCTCTCTGCTTCATCAATTAGATACTTTGGCTTGGGGCTTGAGAATGGTAACTACACCGTGAACCTCAAGTTTGCAGAACATGTCATTCTGGCTGCTACTACCGGGAAATTTCTTGGGAGACGTCTTTTCGATATTTATATCCAGGGCATTCTGGTATCAAAGAATTTTGATATACTAAAGGAGGCAGGTATGTCATCTTTCGGAGCTGTTCAGAAACCATACACGGCTCATGTTTCGGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGGACTTGCTGTATACCTGAGCGGGGTACTTATGGACCTGCTATTGCAGCCATCAGTGCTACACCGGTTGCTGAACTCGCGTTTTCACTACAGACACTGGACAATGGAACACTTAGTGATGGAAGAGTAATTGCTGTGAAGCAATTGTCTGCAGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCTGTGCAACACAATAACCTGGTAAAGTTGTACGGATTCTGCACTGAGGGAGTTAAAAGGCTCCTTGTCTATGAGTATCTGGAGAACAACAGTCTTGATCAAGCATTATTTGGGGAGAGATGTTTAAAACTTGATTGGTCAACACGTTTTAATATATGCTTGGGCATAGCTAGAGGTTTAACTTATCTTCACGAAGAATCGAGGGTTCGAATTGTACACAGAGATGTGAAGGCCAGTAATATTCTGCTCGACGCTAATCTCATCCCCAAGATATCGGATTTTGGTTTGGCTAAGCTTTTTGATGAGAAAAAGACCCACATAAGTACCCGTGTTGCGGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTCTGGCTCTTGAAATTGTCAGTGGTAGGCCAAATTCTGATCCGAGTTTGGGTGAAGAAATGACTTATCTTCTCGAATGGGCTTGGCAATTGCTTGAAAACAGACGGGAAGTTGAACTAGTGGACTCCAGATTATCTGAATTCAATGAGGAAGAAGCACAACGAATAATCAAAATAGGACTTTTGTGCACTCAAACATCACCAATGCTACGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACTGACTGGAAATTTGATGATTTAACTACAGTCACCAGCCTAACAAAACTGGACGGTGTAAGTATTGTCACCAACGTGACTGATATGACGACTAGAGGAACTGATTTTAGCTTCAACAACTCATCAGCAAGTACAAGCATAATGGGGTAA

Protein Analysis

756

Amino Acids

83.5

Weight (kDa)

6.2

Isoelectric Point (pI)

32.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 115 - 231 5.8e-08 Leucine-rich repeat region
Malectin PF11721 244 - 421 5e-35 Malectin domain
Pkinase PF00069 442 - 686 9.4e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 444 - 688 2.5e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1057
Acc36I ACCTGC 2 cut(s) 1109, 1255
AccB7I CCANNNNNTGG 1 cut(s) 230
AccBSI CCGCTC 1 cut(s) 1231
AccI GTMKAC 4 cut(s) 21, 717, 869, 1222
AccII CGCG 1 cut(s) 1289
AciI CCGC 4 cut(s) 50, 79, 1231, 1748
AclI AACGTT 1 cut(s) 456
AclWI GGATC 1 cut(s) 1862
AcsI RAATTY 8 cut(s) 160, 349, 557, 1040, 1096, 1861, 1967, 2129
AcuI CTGAAG 1 cut(s) 47
AcyI GRCGYC 1 cut(s) 1054
AdeI CACNNNGTG 2 cut(s) 12, 1325
AfaI GTAC 7 cut(s) 44, 856, 1237, 1445, 1629, 1738, 2251
AfiI CCNNNNNNNGG 7 cut(s) 118, 230, 750, 1232, 1747, 1877, 2059
AflIII ACRYGT 2 cut(s) 1012, 1556
AgeI ACCGGT 1 cut(s) 1273
AhlI ACTAGT 1 cut(s) 1945
AjnI CCWGG 3 cut(s) 15, 1074, 1431
AleI CACNNNNGTG 1 cut(s) 2192
Alw21I GWGCWC 2 cut(s) 623, 2018
Alw26I GTCTC 2 cut(s) 213, 1045
Alw44I GTGCAC 1 cut(s) 2014
AlwI GGATC 1 cut(s) 1862
AlwNI CAGNNNCTG 1 cut(s) 1306
AoxI GGCC 3 cut(s) 189, 1644, 1856
ApaLI GTGCAC 1 cut(s) 2014
ApeKI GCWGC 5 cut(s) 146, 236, 1025, 1256, 1361
ApoI RAATTY 8 cut(s) 160, 349, 557, 1040, 1096, 1861, 1967, 2129
ArsI GACNNNNNNTTYG 2 cut(s) 2114, 2146
AsiGI ACCGGT 1 cut(s) 1273
Asp700I GAANNNNTTC 1 cut(s) 2068
AspS9I GGNCC 5 cut(s) 47, 189, 542, 785, 1244
AsuC2I CCSGG 2 cut(s) 1036, 2109
AsuHPI GGTGA 4 cut(s) 1892, 2019, 2143, 2179
AsuII TTCGAA 2 cut(s) 537, 1621
AvaII GGWCC 4 cut(s) 47, 542, 785, 1244
BaeGI GKGCMC 1 cut(s) 2018
BaeI ACNNNNGTAYC 2 cut(s) 1720, 1753
BanII GRGCYC 2 cut(s) 623, 780
BarI GAAGNNNNNNTAC 2 cut(s) 531, 563
BauI CACGAG 1 cut(s) 10
BbsI GAAGAC 3 cut(s) 30, 732, 1811
Bbv12I GWGCWC 2 cut(s) 623, 2018
BbvCI CCTCAGC 1 cut(s) 671
BbvI GCAGC 5 cut(s) 158, 223, 1012, 1268, 1373
BccI CCATC 8 cut(s) 120, 343, 743, 813, 1197, 1268, 1322, 2050
BceAI ACGGC 1 cut(s) 1173
BciT130I CCWGG 3 cut(s) 17, 1076, 1433
BciVI GTATCC 1 cut(s) 468
BclI TGATCA 1 cut(s) 1510
BcnI CCSGG 2 cut(s) 1036, 2109
BcoDI GTCTC 2 cut(s) 213, 1045
BcuI ACTAGT 1 cut(s) 1945
BfaI CTAG 5 cut(s) 344, 450, 1584, 1946, 2211
BfmI CTRYAG 3 cut(s) 1298, 1359, 2145
BfuAI ACCTGC 2 cut(s) 1109, 1255
BfuI GTATCC 1 cut(s) 468
BisI GCNGC 5 cut(s) 147, 237, 1026, 1257, 1362
BlpI GCTNAGC 1 cut(s) 1704
BlsI GCNGC 5 cut(s) 148, 238, 1027, 1258, 1363
Bme1390I CCNGG 5 cut(s) 17, 1036, 1076, 1433, 2109
Bme18I GGWCC 4 cut(s) 47, 542, 785, 1244
BmgT120I GGNCC 5 cut(s) 47, 189, 542, 785, 1244
BmiI GGNNCC 1 cut(s) 1475
BmrFI CCNGG 5 cut(s) 17, 1036, 1076, 1433, 2109
BmsI GCATC 1 cut(s) 1373
BoxI GACNNNNGTC 1 cut(s) 1811
BpiI GAAGAC 3 cut(s) 30, 732, 1811
BplI GAGNNNNNCTC 2 cut(s) 610, 642
BpmI CTGGAG 2 cut(s) 1514, 1939
Bpu10I CCTNAGC 2 cut(s) 671, 1227
Bpu1102I GCTNAGC 1 cut(s) 1704
Bpu14I TTCGAA 2 cut(s) 537, 1621
BpuEI CTTGAG 6 cut(s) 44, 71, 101, 535, 983, 992
BpuMI CCSGG 2 cut(s) 1036, 2109
BsaHI GRCGYC 1 cut(s) 1054
BsaI GGTCTC 1 cut(s) 213
BsaJI CCNNGG 3 cut(s) 781, 1075, 1372
BsaWI WCCGGW 3 cut(s) 215, 1273, 1771
Bsc4I CCNNNNNNNGG 7 cut(s) 118, 230, 750, 1232, 1747, 1877, 2059
Bse118I RCCGGY 1 cut(s) 1273
Bse1I ACTGG 6 cut(s) 811, 1311, 1384, 1647, 2129, 2172
Bse3DI GCAATG 2 cut(s) 209, 838
BseBI CCWGG 3 cut(s) 17, 1076, 1433
BseDI CCNNGG 3 cut(s) 781, 1075, 1372
BseGI GGATG 3 cut(s) 1364, 1674, 2042
BseLI CCNNNNNNNGG 7 cut(s) 118, 230, 750, 1232, 1747, 1877, 2059
BseMI GCAATG 2 cut(s) 209, 838
BseMII CTCAG 8 cut(s) 281, 330, 662, 720, 878, 1218, 1386, 1449
BseNI ACTGG 6 cut(s) 811, 1311, 1384, 1647, 2129, 2172
BseSI GKGCMC 1 cut(s) 2018
BseXI GCAGC 5 cut(s) 158, 223, 1012, 1268, 1373
BsgI GTGCAG 1 cut(s) 1438
Bsh1236I CGCG 1 cut(s) 1289
BshFI GGCC 3 cut(s) 191, 1646, 1858
BshTI ACCGGT 1 cut(s) 1273
BsiHKAI GWGCWC 2 cut(s) 623, 2018
BsiSI CCGG 5 cut(s) 216, 1035, 1274, 1772, 2109
BsiWI CGTACG 1 cut(s) 42
BslFI GGGAC 2 cut(s) 1225, 2035
BslI CCNNNNNNNGG 7 cut(s) 118, 230, 750, 1232, 1747, 1877, 2059
BsmAI GTCTC 2 cut(s) 213, 1045
BsmBI CGTCTC 1 cut(s) 1045
BsmFI GGGAC 2 cut(s) 1225, 2035
BsmI GAATGC 2 cut(s) 1080, 2070
BsnI GGCC 3 cut(s) 191, 1646, 1858
Bso31I GGTCTC 1 cut(s) 213
Bsp119I TTCGAA 2 cut(s) 537, 1621
Bsp1286I GDGCHC 3 cut(s) 623, 780, 2018
Bsp1407I TGTACA 1 cut(s) 1627
Bsp143I GATC 4 cut(s) 293, 421, 1510, 1867
Bsp1720I GCTNAGC 1 cut(s) 1704
BspACI CCGC 4 cut(s) 50, 79, 1231, 1748
BspANI GGCC 3 cut(s) 191, 1646, 1858
BspCNI CTCAG 8 cut(s) 282, 331, 663, 721, 877, 1219, 1387, 1450
BspFNI CGCG 1 cut(s) 1289
BspLI GGNNCC 1 cut(s) 1475
BspMAI CTGCAG 1 cut(s) 1363
BspMI ACCTGC 2 cut(s) 1109, 1255
BspPI GGATC 1 cut(s) 1862
BspQI GCTCTTC 1 cut(s) 628
BspT104I TTCGAA 2 cut(s) 537, 1621
BspTNI GGTCTC 1 cut(s) 213
BsrBI CCGCTC 1 cut(s) 1231
BsrDI GCAATG 2 cut(s) 209, 838
BsrFI RCCGGY 1 cut(s) 1273
BsrGI TGTACA 1 cut(s) 1627
BsrI ACTGG 6 cut(s) 811, 1311, 1384, 1647, 2129, 2172
BssAI RCCGGY 1 cut(s) 1273
BssECI CCNNGG 3 cut(s) 781, 1075, 1372
BssMI GATC 4 cut(s) 293, 421, 1510, 1867
BssNAI GTATAC 3 cut(s) 718, 870, 1223
BssNI GRCGYC 1 cut(s) 1054
BssSI CACGAG 1 cut(s) 10
BssT1I CCWWGG 2 cut(s) 781, 1372
Bst1107I GTATAC 3 cut(s) 718, 870, 1223
Bst2BI CACGAG 1 cut(s) 10
Bst2UI CCWGG 3 cut(s) 17, 1076, 1433
Bst4CI ACNGT 6 cut(s) 47, 991, 1505, 2095, 2149, 2174
Bst6I CTCTTC 2 cut(s) 628, 1327
BstACI GRCGYC 1 cut(s) 1054
BstAUI TGTACA 1 cut(s) 1627
BstBI TTCGAA 2 cut(s) 537, 1621
BstC8I GCNNGC 1 cut(s) 850
BstF5I GGATG 3 cut(s) 1364, 1674, 2042
BstFNI CGCG 1 cut(s) 1289
BstKTI GATC 4 cut(s) 296, 424, 1513, 1870
BstMAI GTCTC 2 cut(s) 213, 1045
BstMBI GATC 4 cut(s) 293, 421, 1510, 1867
BstMWI GCNNNNNNNGC 5 cut(s) 97, 340, 1256, 1265, 1286
BstNI CCWGG 3 cut(s) 17, 1076, 1433
BstNSI RCATGY 1 cut(s) 1016
BstPAI GACNNNNGTC 1 cut(s) 1811
BstSCI CCNGG 5 cut(s) 15, 1034, 1074, 1431, 2107
BstSFI CTRYAG 3 cut(s) 1298, 1359, 2145
BstSLI GKGCMC 1 cut(s) 2018
BstUI CGCG 1 cut(s) 1289
BstV1I GCAGC 5 cut(s) 158, 223, 1012, 1268, 1373
BstV2I GAAGAC 3 cut(s) 30, 732, 1811
BstZ17I GTATAC 3 cut(s) 718, 870, 1223
BsuI GTATCC 1 cut(s) 468
BsuRI GGCC 3 cut(s) 191, 1646, 1858
BtsCI GGATG 3 cut(s) 1364, 1674, 2042
BtsI GCAGTG 2 cut(s) 235, 403
BtsIMutI CAGTG 8 cut(s) 104, 171, 235, 403, 1270, 1304, 1455, 1855
BveI ACCTGC 2 cut(s) 1109, 1255
Cac8I GCNNGC 1 cut(s) 850
CaiI CAGNNNCTG 1 cut(s) 1306
Cfr10I RCCGGY 1 cut(s) 1273
Cfr13I GGNCC 5 cut(s) 47, 189, 542, 785, 1244
CpoI CGGWCCG 1 cut(s) 47
CseI GACGC 1 cut(s) 1673
CsiI ACCWGGT 1 cut(s) 1431
Csp6I GTAC 7 cut(s) 43, 855, 1236, 1444, 1628, 1737, 2250
CspAI ACCGGT 1 cut(s) 1273
CspI CGGWCCG 1 cut(s) 47
CviAII CATG 5 cut(s) 225, 1013, 1163, 1783, 2047
CviQI GTAC 7 cut(s) 43, 855, 1236, 1444, 1628, 1737, 2250
DpnI GATC 4 cut(s) 295, 423, 1512, 1869
DpnII GATC 4 cut(s) 293, 421, 1510, 1867
DraI TTTAAA 1 cut(s) 1539
DraIII CACNNNGTG 2 cut(s) 12, 1325
Eam1104I CTCTTC 2 cut(s) 628, 1327
EarI CTCTTC 2 cut(s) 628, 1327
Ecl136II GAGCTC 1 cut(s) 621
Eco130I CCWWGG 2 cut(s) 781, 1372
Eco24I GRGCYC 2 cut(s) 623, 780
Eco31I GGTCTC 1 cut(s) 213
Eco32I GATATC 1 cut(s) 1686
Eco47I GGWCC 4 cut(s) 47, 542, 785, 1244
Eco53kI GAGCTC 1 cut(s) 621
Eco57I CTGAAG 1 cut(s) 47
EcoICRI GAGCTC 1 cut(s) 621
EcoO109I RGGNCCY 1 cut(s) 542
EcoRI GAATTC 2 cut(s) 160, 1967
EcoRII CCWGG 3 cut(s) 15, 1074, 1431
EcoRV GATATC 1 cut(s) 1686
EcoT14I CCWWGG 2 cut(s) 781, 1372
EcoT38I GRGCYC 2 cut(s) 623, 780
ErhI CCWWGG 2 cut(s) 781, 1372
Esp3I CGTCTC 1 cut(s) 1045
FaeI CATG 5 cut(s) 228, 1016, 1166, 1786, 2050
FaqI GGGAC 2 cut(s) 1225, 2035
FatI CATG 5 cut(s) 224, 1012, 1162, 1782, 2046
FauI CCCGC 2 cut(s) 1224, 1741
FbaI TGATCA 1 cut(s) 1510
FblI GTMKAC 4 cut(s) 21, 717, 869, 1222
Fnu4HI GCNGC 5 cut(s) 147, 237, 1026, 1257, 1362
FokI GGATG 3 cut(s) 1351, 1661, 2029
FriOI GRGCYC 2 cut(s) 623, 780
Fsp4HI GCNGC 5 cut(s) 147, 237, 1026, 1257, 1362
FspBI CTAG 5 cut(s) 344, 450, 1584, 1946, 2211
GluI GCNGC 5 cut(s) 147, 237, 1026, 1257, 1362
GsuI CTGGAG 2 cut(s) 1514, 1939
HaeIII GGCC 3 cut(s) 191, 1646, 1858
HapII CCGG 5 cut(s) 216, 1035, 1274, 1772, 2109
HgaI GACGC 1 cut(s) 1673
Hin1I GRCGYC 1 cut(s) 1054
Hin1II CATG 5 cut(s) 228, 1016, 1166, 1786, 2050
HincII GTYRAC 1 cut(s) 1554
HindII GTYRAC 1 cut(s) 1554
HindIII AAGCTT 2 cut(s) 503, 1706
HinfI GANTC 7 cut(s) 245, 403, 692, 908, 1449, 1610, 1952
HpaII CCGG 5 cut(s) 216, 1035, 1274, 1772, 2109
HphI GGTGA 4 cut(s) 1892, 2019, 2143, 2179
Hpy188III TCNNGA 8 cut(s) 922, 1493, 1508, 1604, 1838, 1901, 1956, 2073
Hpy99I CGWCG 1 cut(s) 1667
HpyAV CCTTC 5 cut(s) 533, 643, 711, 760, 1636
HpyCH4III ACNGT 6 cut(s) 47, 991, 1505, 2095, 2149, 2174
HpyCH4IV ACGT 6 cut(s) 375, 456, 737, 1054, 1558, 2193
HpyF10VI GCNNNNNNNGC 5 cut(s) 97, 340, 1256, 1265, 1286
HpySE526I ACGT 6 cut(s) 375, 456, 737, 1054, 1558, 2193
Hsp92I GRCGYC 1 cut(s) 1054
Hsp92II CATG 5 cut(s) 228, 1016, 1166, 1786, 2050
Ksp22I TGATCA 1 cut(s) 1510
Kzo9I GATC 4 cut(s) 293, 421, 1510, 1867
LguI GCTCTTC 1 cut(s) 628
LmnI GCTCC 6 cut(s) 75, 81, 233, 618, 1136, 1479
Lsp1109I GCAGC 5 cut(s) 158, 223, 1012, 1268, 1373
LweI GCATC 1 cut(s) 1373
MabI ACCWGGT 1 cut(s) 1431
MaeI CTAG 5 cut(s) 344, 450, 1584, 1946, 2211
MaeII ACGT 6 cut(s) 375, 456, 737, 1054, 1558, 2193
MaeIII GTNAC 9 cut(s) 802, 980, 1390, 2086, 2095, 2111, 2149, 2185, 2194
MalI GATC 4 cut(s) 295, 423, 1512, 1869
MbiI CCGCTC 1 cut(s) 1231
MboI GATC 4 cut(s) 293, 421, 1510, 1867
MfeI CAATTG 3 cut(s) 1352, 1755, 1916
MhlI GDGCHC 3 cut(s) 623, 780, 2018
MlyI GAGTC 2 cut(s) 239, 1946
MmeI TCCRAC 1 cut(s) 817
MroXI GAANNNNTTC 1 cut(s) 2068
MseI TTAA 6 cut(s) 353, 1467, 1538, 1563, 1592, 2141
MslI CAYNNNNRTG 2 cut(s) 1635, 2192
MspI CCGG 5 cut(s) 216, 1035, 1274, 1772, 2109
MspR9I CCNGG 5 cut(s) 17, 1036, 1076, 1433, 2109
MunI CAATTG 3 cut(s) 1352, 1755, 1916
Mva1269I GAATGC 2 cut(s) 1080, 2070
MvaI CCWGG 3 cut(s) 17, 1076, 1433
MvnI CGCG 1 cut(s) 1289
MwoI GCNNNNNNNGC 5 cut(s) 97, 340, 1256, 1265, 1286
NciI CCSGG 2 cut(s) 1036, 2109
NdeII GATC 4 cut(s) 293, 421, 1510, 1867
NlaIII CATG 5 cut(s) 228, 1016, 1166, 1786, 2050
NlaIV GGNNCC 1 cut(s) 1475
NmuCI GTSAC 5 cut(s) 802, 2086, 2149, 2185, 2194
NspI RCATGY 1 cut(s) 1016
NspV TTCGAA 2 cut(s) 537, 1621
OliI CACNNNNGTG 1 cut(s) 2192
PciI ACATGT 1 cut(s) 1012
PciSI GCTCTTC 1 cut(s) 628
PctI GAATGC 2 cut(s) 1080, 2070
PdmI GAANNNNTTC 1 cut(s) 2068
PfeI GAWTC 5 cut(s) 403, 692, 908, 1449, 1610
Pfl23II CGTACG 1 cut(s) 42
PflMI CCANNNNNTGG 1 cut(s) 230
PinAI ACCGGT 1 cut(s) 1273
PkrI GCNGC 5 cut(s) 148, 238, 1027, 1258, 1363
PleI GAGTC 2 cut(s) 239, 1946
PpsI GAGTC 2 cut(s) 239, 1946
PpuMI RGGWCCY 1 cut(s) 542
PscI ACATGT 1 cut(s) 1012
PshAI GACNNNNGTC 1 cut(s) 1811
Psp124BI GAGCTC 1 cut(s) 623
Psp1406I AACGTT 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 542
Psp6I CCWGG 3 cut(s) 15, 1074, 1431
PspGI CCWGG 3 cut(s) 15, 1074, 1431
PspLI CGTACG 1 cut(s) 42
PspN4I GGNNCC 1 cut(s) 1475
PspPI GGNCC 5 cut(s) 47, 189, 542, 785, 1244
PspPPI RGGWCCY 1 cut(s) 542
PstI CTGCAG 1 cut(s) 1363
PstNI CAGNNNCTG 1 cut(s) 1306
RsaI GTAC 7 cut(s) 44, 856, 1237, 1445, 1629, 1738, 2251
RsaNI GTAC 7 cut(s) 43, 855, 1236, 1444, 1628, 1737, 2250
RseI CAYNNNNRTG 2 cut(s) 1635, 2192
Rsr2I CGGWCCG 1 cut(s) 47
RsrII CGGWCCG 1 cut(s) 47
SacI GAGCTC 1 cut(s) 623
SapI GCTCTTC 1 cut(s) 628
SaqAI TTAA 6 cut(s) 353, 1467, 1538, 1563, 1592, 2141
SatI GCNGC 5 cut(s) 147, 237, 1026, 1257, 1362
Sau3AI GATC 4 cut(s) 293, 421, 1510, 1867
Sau96I GGNCC 5 cut(s) 47, 189, 542, 785, 1244
SchI GAGTC 2 cut(s) 239, 1946
ScrFI CCNGG 5 cut(s) 17, 1036, 1076, 1433, 2109
SduI GDGCHC 3 cut(s) 623, 780, 2018
SexAI ACCWGGT 1 cut(s) 1431
SfaNI GCATC 1 cut(s) 1373
SfcI CTRYAG 3 cut(s) 1298, 1359, 2145
SfuI TTCGAA 2 cut(s) 537, 1621
SinI GGWCC 4 cut(s) 47, 542, 785, 1244
SmiMI CAYNNNNRTG 2 cut(s) 1635, 2192
SmlI CTYRAG 6 cut(s) 59, 86, 116, 514, 971, 998
SmoI CTYRAG 6 cut(s) 59, 86, 116, 514, 971, 998
SpeI ACTAGT 1 cut(s) 1945
SsiI CCGC 4 cut(s) 50, 79, 1231, 1748
SspI AATATT 3 cut(s) 184, 685, 1654
SspMI CTAG 5 cut(s) 344, 450, 1584, 1946, 2211
SstI GAGCTC 1 cut(s) 623
StyD4I CCNGG 5 cut(s) 15, 1034, 1074, 1431, 2107
StyI CCWWGG 2 cut(s) 781, 1372
TaaI ACNGT 6 cut(s) 47, 991, 1505, 2095, 2149, 2174
TaiI ACGT 6 cut(s) 378, 459, 740, 1057, 1561, 2196
TaqI TCGA 6 cut(s) 537, 1062, 1613, 1621, 1662, 1902
TatI WGTACW 2 cut(s) 1627, 2249
TfiI GAWTC 5 cut(s) 403, 692, 908, 1449, 1610
Tru1I TTAA 6 cut(s) 353, 1467, 1538, 1563, 1592, 2141
Tru9I TTAA 6 cut(s) 353, 1467, 1538, 1563, 1592, 2141
TscAI CASTG 8 cut(s) 111, 171, 235, 403, 1270, 1311, 1462, 1855
TseFI GTSAC 5 cut(s) 802, 2086, 2149, 2185, 2194
TseI GCWGC 5 cut(s) 146, 236, 1025, 1256, 1361
Tsp45I GTSAC 5 cut(s) 802, 2086, 2149, 2185, 2194
TspDTI ATGAA 5 cut(s) 475, 593, 662, 783, 933
TspGWI ACGGA 1 cut(s) 1461
TspRI CASTG 8 cut(s) 111, 171, 235, 403, 1270, 1311, 1462, 1855
Van91I CCANNNNNTGG 1 cut(s) 230
VneI GTGCAC 1 cut(s) 2014
VpaK11BI GGWCC 4 cut(s) 47, 542, 785, 1244
XapI RAATTY 8 cut(s) 160, 349, 557, 1040, 1096, 1861, 1967, 2129
XceI RCATGY 1 cut(s) 1016
XmiI GTMKAC 4 cut(s) 21, 717, 869, 1222
XmnI GAANNNNTTC 1 cut(s) 2068
XspI CTAG 5 cut(s) 344, 450, 1584, 1946, 2211
ZraI GACGTC 1 cut(s) 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.