Rh2DG258000
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
27548831 .. 27558196
9366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG258000.1

Sequence Viewer

Length: 3153 bp
ATGTCAGGGGGTGCCTCCTTATCAGTTTTGGTCTTATTTTTGTGCATCTCTGGTATAGCACAAGCTCAAGTTTCTGCTCCTGCTCCTCAACCTCAAGCTACTAATGCCACCACTGACCCATCTCAAGCGAGAGCTTTGAATTCAGTATTTGAGAAATGGAAGATTCGGGCCAATCCGGAGCAATGGAACACAACCGGAGACCCATGCACTGGAGCTGCCATAAACGCCACCAAATTTGATGACACCGATTACAACCCCTTAATCATATGTGACTGCTCTTATCAATCCAGCACCATTTGCCACATTACCCAACTGAAGGTTTATGACTTGAAAGTTGTTGGTGTAATTCCAGACGAGTTATGGAGTTTGACTTCTCTCACCAATCTGAATTTGGCACTGAATTACTTGACAGGACCTCTCTCTGCAGCCATTGCAAATCTAACTGGCTTGCAATACTTGACTGTTGGCATCAACGATTTATCAGGCGAGCTACCTAAAGAACTTGGACAACTTACTGAACTGAGATCATTGGCTTTTGGAGGAAACAACTTTTCGGGTTCTCTGCCATCTGAGCTAGGGAATTTATTCAATTTACAACAGCTTTACATTGATAGTTCGGGAGTTAGCGGTGAGATTCCACCAACATTTGCTAATCTACAAAACTTGGAATTTTTTTGGGCTAGAAATGTTGAACTCTCTGGCAGGATACCAGACTTCATTGGGAATTGGTCAAAGCTTACTTCCTTGAGGTTTCAAGGAAACTCTTTTGAAGGTCCTATACCATTTGCATTTTCCAATCTGACTTCTATGCAAGAGCTACGCATTAGTGATTTGTCGAATGCCAATGGGAGCTCTTCTCTTGCGTTTATTGAGAATATGAAGGCTCTAAATATCTTAGAGCTGAGGAATAACAATATTTCTGATTCAATTCCTTCCGATTTTGGAGTATACCAAAGTTTGTCTCAGCTGGATTTGAGCTTCAACAATTTAACTGGACAGATACCAGACTCACTTTTTAATTTGAGTTCTCTCTCCATCTTGTTTCTTGGAAACAATAAGTTGAATGGCACCCTTCCCGAGTATAAGACAGCATCTCTTCTCAATATAGATTTGTCGTACAATTATCTAGATGGGAGCATTCCTTCTTGGGTCAAAGAAGAAAAATTACAGCTTAATTTAGTTGCCAACAACTTCAGCATAGAAAGTTTACAGAGCAGTGGTCTTCCTTCAGGGTTGGCTTGCCTTCAAAGAAACTTTCCTTGCAATCGTGGCCCTGGAATCTATTATAATTTTGGGATTAATTGTGGAGGACCTGAGATTACGTCTTCCTCCGATGGAATTGTGTATGAGAAGGAAAATGAGCCCCTTGGACCAGCTTCATATTTTGTGACTGGCACAAGCAGATGGGGAGTTAGCAATGTCGGATCTTTCACTGGCAGTACCAATCCTCAGTATACAAGTTTCTCCTCATCTCAATTCACAAATACTTTTGATTCTGTGCTATTCCAGACTGCAAGGCTCTCTGCTTCATCAATTAGATACTTTGGCTTGGGGCTTGAGAATGGTAACTACACCGTGAACCTCAAGTTTGCAGAACATGTCATTCTGGCTGCTACTACCGGGAAATTTCTTGGGAAACGTCTTTTTGATATTTATATCCAGGGCATTCTGGTATCAAAGGATTTTGATATACTAAAGGAGGCAGGTATGTCATCTTTCCGAGCTGTTCAGAAGCCATACACGGCTCATGTTTCGGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGGACTTGCTGCGTACCTGCGCGGGGTACTTATGGACCTGCTATTGCAGCCATCAGTGCTACACCGGATTTCATACCTACTGTCAGTAACAACCCTCCAACTAGTAAGAAGAATCGAACTGGGCTGATTGTTGGGATTGTTGTGGGTGGTGGAGTACTTTTGGTTCTGTTGTTTGTGGCTTTTTATCTTGTTCAAAGAAGAAAAAGGTCTGACCCTGATGACGACGAAGAGCTGTACGGGATAGATGTTGGACCACTTACCTTCAGTTATCCTGAACTAAAGACAGCTACAAACGATTTTGATGAAGCTCATAAGCTTGGAGAGGGCGGATTTGGACCTGTCTATAGAGGAACACTTAGTGATGGAAGAGTAATTGCTGTGAAGCAATTGTCTGCAGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCTGTGCAACACAATAACCTGGTAAAGTTGTACGGATTCTGCACTGAGGGAGTTAAAAGGCTCCTTGTCTATGAGTATCTGGAGAACAACAGTCTTGATCAAGCATTATTTGGAGAGAGACGTTTAAATCTTGATTGGTCAACACGTTTTAATATATGCTTGGGCATAGCTAGAGGTTTAACTTATCTTCACGAAGAATCAAGGGTTCGAATTGTACACAGAGATGTGAAGGCCAGTAATATTCTGCTTGACACTAATCTCATCCCCAAGATATCGGATTTTGGTTTGGCTAAGCTTTTTGATGAGAAAAAGACCCACATAAGTACCCGTGTTGCGGGAACATTTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTGTGGCTCTTGAAATTGTCAGTGGTAGGCCAAATTCTGATCCGAGTTTGGGTGAAGAAATGACTTATCTTCTCGAATGGGCTTGGCAATTGCATGAAAACAGACGGGCAGTTGAACTAGTGGACTCTAGATTATCTGAATTCAATGAGGAAGAAGCACAACGAATAATCAAAATAGGACTTTTGTGCACTCAAACATCACCAATGCTACGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACAGACTGGAAATTTGATGATTTAACGACAGTCACCAGCCTAACAAAACTGGATGGTGCAAGTACTGTCACCAACCTAGCGACTGATATGACAACTAAAGGAACTGATTTTAGCTTCAACAACTCATCGGCAAGTACAAGCATAATGGGCCAATCACCTCCTAAAGCCATTCATTCTATGTCTCAAAATAATGTTGATGGTCGGTGA

Protein Analysis

1050

Amino Acids

114.73

Weight (kDa)

5.25

Isoelectric Point (pI)

34.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 101 - 249 1e-09 Leucine-rich repeat region
LRR_14 PF23598 166 - 274 9.7e-09 Leucine-rich repeat region
LRR_14 PF23598 265 - 353 1e-06 Leucine-rich repeat region
Malectin PF11721 431 - 616 1.3e-39 Malectin domain
Pkinase PF00069 699 - 962 1.1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 702 - 964 8.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1287
Acc36I ACCTGC 3 cut(s) 1694, 1819, 1840
AccB1I GGYRCC 2 cut(s) 11, 1067
AccB7I CCANNNNNTGG 1 cut(s) 209
AccI GTMKAC 2 cut(s) 948, 1454
AccII CGCG 1 cut(s) 1816
AccIII TCCGGA 1 cut(s) 175
AciI CCGC 4 cut(s) 627, 1816, 2121, 2576
AclWI GGATC 2 cut(s) 1432, 2690
AcsI RAATTY 9 cut(s) 139, 233, 388, 580, 668, 1625, 2689, 2795, 2957
AcuI CTGAAG 4 cut(s) 335, 1177, 1212, 2041
AdeI CACNNNGTG 1 cut(s) 2153
AfiI CCNNNNNNNGG 6 cut(s) 209, 316, 1817, 2575, 2705, 2887
AflIII ACRYGT 2 cut(s) 1597, 2384
AhlI ACTAGT 2 cut(s) 1895, 2773
AjnI CCWGG 3 cut(s) 1273, 1659, 2259
Alw21I GWGCWC 2 cut(s) 854, 2846
Alw26I GTCTC 4 cut(s) 192, 966, 2353, 3132
Alw44I GTGCAC 1 cut(s) 2842
AlwI GGATC 2 cut(s) 1432, 2690
Ama87I CYCGRG 1 cut(s) 1076
Aor13HI TCCGGA 1 cut(s) 175
AoxI GGCC 5 cut(s) 168, 1270, 2472, 2684, 3094
ApaLI GTGCAC 1 cut(s) 2842
ApeKI GCWGC 6 cut(s) 215, 425, 1610, 1803, 1841, 2189
ApoI RAATTY 9 cut(s) 139, 233, 388, 580, 668, 1625, 2689, 2795, 2957
ArsI GACNNNNNNTTYG 2 cut(s) 2942, 2974
AseI ATTAAT 1 cut(s) 1299
Asp700I GAANNNNTTC 2 cut(s) 584, 2896
AspLEI GCGC 1 cut(s) 1816
AsuC2I CCSGG 2 cut(s) 1621, 2937
AsuHPI GGTGA 7 cut(s) 370, 641, 2720, 2847, 2971, 3007, 3093
AsuII TTCGAA 1 cut(s) 2449
AvaI CYCGRG 1 cut(s) 1076
AvaII GGWCC 7 cut(s) 413, 773, 1310, 1370, 1829, 2045, 2129
BaeGI GKGCMC 1 cut(s) 2846
BaeI ACNNNNGTAYC 2 cut(s) 2548, 2581
BanI GGYRCC 2 cut(s) 11, 1067
BanII GRGCYC 2 cut(s) 854, 1365
BarI GAAGNNNNNNTAC 4 cut(s) 762, 794, 1149, 1181
BbsI GAAGAC 3 cut(s) 1214, 1317, 2639
Bbv12I GWGCWC 2 cut(s) 854, 2846
BbvCI CCTCAGC 1 cut(s) 902
BbvI GCAGC 6 cut(s) 202, 437, 1597, 1790, 1853, 2201
BceAI ACGGC 1 cut(s) 1758
BciT130I CCWGG 3 cut(s) 1275, 1661, 2261
BciVI GTATCC 1 cut(s) 699
BclI TGATCA 1 cut(s) 2338
BcnI CCSGG 2 cut(s) 1621, 2937
BcoDI GTCTC 4 cut(s) 192, 966, 2353, 3132
BcuI ACTAGT 2 cut(s) 1895, 2773
BfaI CTAG 8 cut(s) 575, 681, 1127, 1896, 2412, 2774, 2784, 3023
BfmI CTRYAG 3 cut(s) 423, 2137, 2187
BfuAI ACCTGC 3 cut(s) 1694, 1819, 1840
BfuI GTATCC 1 cut(s) 699
BisI GCNGC 6 cut(s) 216, 426, 1611, 1804, 1842, 2190
BlpI GCTNAGC 1 cut(s) 2532
BlsI GCNGC 6 cut(s) 217, 427, 1612, 1805, 1843, 2191
BmcAI AGTACT 2 cut(s) 1950, 3010
Bme1390I CCNGG 5 cut(s) 1275, 1621, 1661, 2261, 2937
Bme18I GGWCC 7 cut(s) 413, 773, 1310, 1370, 1829, 2045, 2129
BmeT110I CYCGRG 1 cut(s) 1076
BmiI GGNNCC 3 cut(s) 13, 1069, 2303
BmrFI CCNGG 5 cut(s) 1275, 1621, 1661, 2261, 2937
BmrI ACTGGG 1 cut(s) 1923
BmsI GCATC 4 cut(s) 54, 477, 1100, 2201
BmuI ACTGGG 1 cut(s) 1923
BoxI GACNNNNGTC 1 cut(s) 2639
BpiI GAAGAC 3 cut(s) 1214, 1317, 2639
BplI GAGNNNNNCTC 2 cut(s) 841, 873
BpmI CTGGAG 2 cut(s) 231, 2342
Bpu10I CCTNAGC 1 cut(s) 902
Bpu1102I GCTNAGC 1 cut(s) 2532
Bpu14I TTCGAA 1 cut(s) 2449
BpuEI CTTGAG 6 cut(s) 51, 78, 108, 766, 1568, 1577
BpuMI CCSGG 2 cut(s) 1621, 2937
BsaI GGTCTC 1 cut(s) 192
BsaJI CCNNGG 4 cut(s) 1273, 1366, 1660, 2200
BsaWI WCCGGW 4 cut(s) 175, 194, 1858, 2599
Bsc4I CCNNNNNNNGG 6 cut(s) 209, 316, 1817, 2575, 2705, 2887
Bse3DI GCAATG 3 cut(s) 188, 429, 1423
BseAI TCCGGA 1 cut(s) 175
BseBI CCWGG 3 cut(s) 1275, 1661, 2261
BseDI CCNNGG 4 cut(s) 1273, 1366, 1660, 2200
BseGI GGATG 4 cut(s) 2192, 2502, 2870, 3004
BseLI CCNNNNNNNGG 6 cut(s) 209, 316, 1817, 2575, 2705, 2887
BseMI GCAATG 3 cut(s) 188, 429, 1423
BseMII CTCAG 8 cut(s) 512, 561, 893, 977, 1305, 1463, 2214, 2277
BseRI GAGGAG 2 cut(s) 75, 1456
BseSI GKGCMC 1 cut(s) 2846
BseXI GCAGC 6 cut(s) 202, 437, 1597, 1790, 1853, 2201
BsgI GTGCAG 1 cut(s) 2266
Bsh1236I CGCG 1 cut(s) 1816
BshFI GGCC 5 cut(s) 170, 1272, 2474, 2686, 3096
BshNI GGYRCC 2 cut(s) 11, 1067
BsiHKAI GWGCWC 2 cut(s) 854, 2846
BsiHKCI CYCGRG 1 cut(s) 1076
BsiSI CCGG 6 cut(s) 176, 195, 1620, 1859, 2600, 2937
BslFI GGGAC 2 cut(s) 1810, 2863
BslI CCNNNNNNNGG 6 cut(s) 209, 316, 1817, 2575, 2705, 2887
BsmAI GTCTC 4 cut(s) 192, 966, 2353, 3132
BsmBI CGTCTC 1 cut(s) 2353
BsmFI GGGAC 2 cut(s) 1810, 2863
BsmI GAATGC 4 cut(s) 844, 1137, 1665, 2898
BsnI GGCC 5 cut(s) 170, 1272, 2474, 2686, 3096
Bso31I GGTCTC 1 cut(s) 192
BsoBI CYCGRG 1 cut(s) 1076
Bsp119I TTCGAA 1 cut(s) 2449
Bsp1286I GDGCHC 3 cut(s) 854, 1365, 2846
Bsp13I TCCGGA 1 cut(s) 175
Bsp1407I TGTACA 1 cut(s) 2455
Bsp143I GATC 4 cut(s) 524, 1424, 2338, 2695
Bsp1720I GCTNAGC 1 cut(s) 2532
BspACI CCGC 4 cut(s) 627, 1816, 2121, 2576
BspANI GGCC 5 cut(s) 170, 1272, 2474, 2686, 3096
BspCNI CTCAG 8 cut(s) 513, 562, 894, 976, 1306, 1462, 2215, 2278
BspEI TCCGGA 1 cut(s) 175
BspFNI CGCG 1 cut(s) 1816
BspLI GGNNCC 3 cut(s) 13, 1069, 2303
BspMAI CTGCAG 2 cut(s) 427, 2191
BspMI ACCTGC 3 cut(s) 1694, 1819, 1840
BspPI GGATC 2 cut(s) 1432, 2690
BspQI GCTCTTC 2 cut(s) 859, 2016
BspT104I TTCGAA 1 cut(s) 2449
BspT107I GGYRCC 2 cut(s) 11, 1067
BspTNI GGTCTC 1 cut(s) 192
BsrDI GCAATG 3 cut(s) 188, 429, 1423
BsrGI TGTACA 1 cut(s) 2455
BssECI CCNNGG 4 cut(s) 1273, 1366, 1660, 2200
BssMI GATC 4 cut(s) 524, 1424, 2338, 2695
BssNAI GTATAC 2 cut(s) 949, 1455
BssT1I CCWWGG 2 cut(s) 1366, 2200
Bst1107I GTATAC 2 cut(s) 949, 1455
Bst2UI CCWGG 3 cut(s) 1275, 1661, 2261
Bst4CI ACNGT 7 cut(s) 463, 1576, 1876, 2333, 2923, 2977, 3013
Bst6I CTCTTC 4 cut(s) 859, 1101, 2016, 2155
BstAPI GCANNNNNTGC 2 cut(s) 297, 431
BstAUI TGTACA 1 cut(s) 2455
BstBI TTCGAA 1 cut(s) 2449
BstC8I GCNNGC 3 cut(s) 449, 488, 1240
BstF5I GGATG 4 cut(s) 2192, 2502, 2870, 3004
BstFNI CGCG 1 cut(s) 1816
BstHHI GCGC 1 cut(s) 1816
BstKTI GATC 4 cut(s) 527, 1427, 2341, 2698
BstMAI GTCTC 4 cut(s) 192, 966, 2353, 3132
BstMBI GATC 4 cut(s) 524, 1424, 2338, 2695
BstMWI GCNNNNNNNGC 9 cut(s) 104, 224, 297, 431, 571, 1269, 1841, 1850, 3093
BstNI CCWGG 3 cut(s) 1275, 1661, 2261
BstNSI RCATGY 1 cut(s) 1601
BstPAI GACNNNNGTC 1 cut(s) 2639
BstSCI CCNGG 5 cut(s) 1273, 1619, 1659, 2259, 2935
BstSFI CTRYAG 3 cut(s) 423, 2137, 2187
BstSLI GKGCMC 1 cut(s) 2846
BstUI CGCG 1 cut(s) 1816
BstV1I GCAGC 6 cut(s) 202, 437, 1597, 1790, 1853, 2201
BstV2I GAAGAC 3 cut(s) 1214, 1317, 2639
BstX2I RGATCY 1 cut(s) 1424
BstYI RGATCY 1 cut(s) 1424
BstZ17I GTATAC 2 cut(s) 949, 1455
BsuI GTATCC 1 cut(s) 699
BsuRI GGCC 5 cut(s) 170, 1272, 2474, 2686, 3096
BtsCI GGATG 4 cut(s) 2192, 2502, 2870, 3004
BtsI GCAGTG 1 cut(s) 1222
BtsIMutI CAGTG 8 cut(s) 111, 207, 395, 1222, 1431, 1855, 2283, 2683
BveI ACCTGC 3 cut(s) 1694, 1819, 1840
Cac8I GCNNGC 3 cut(s) 449, 488, 1240
CfoI GCGC 1 cut(s) 1816
CsiI ACCWGGT 1 cut(s) 2259
CspCI CAANNNNNGTGG 2 cut(s) 217, 252
CviAII CATG 6 cut(s) 204, 1598, 1748, 2611, 2750, 2875
DpnI GATC 4 cut(s) 526, 1426, 2340, 2697
DpnII GATC 4 cut(s) 524, 1424, 2338, 2695
DraI TTTAAA 1 cut(s) 2367
DraIII CACNNNGTG 1 cut(s) 2153
Eam1104I CTCTTC 4 cut(s) 859, 1101, 2016, 2155
EarI CTCTTC 4 cut(s) 859, 1101, 2016, 2155
EciI GGCGGA 1 cut(s) 2136
Ecl136II GAGCTC 1 cut(s) 852
Eco130I CCWWGG 2 cut(s) 1366, 2200
Eco24I GRGCYC 2 cut(s) 854, 1365
Eco31I GGTCTC 1 cut(s) 192
Eco32I GATATC 1 cut(s) 2514
Eco47I GGWCC 7 cut(s) 413, 773, 1310, 1370, 1829, 2045, 2129
Eco53kI GAGCTC 1 cut(s) 852
Eco57I CTGAAG 4 cut(s) 335, 1177, 1212, 2041
Eco88I CYCGRG 1 cut(s) 1076
EcoICRI GAGCTC 1 cut(s) 852
EcoO109I RGGNCCY 3 cut(s) 413, 773, 1310
EcoRI GAATTC 2 cut(s) 139, 2795
EcoRII CCWGG 3 cut(s) 1273, 1659, 2259
EcoRV GATATC 1 cut(s) 2514
EcoT14I CCWWGG 2 cut(s) 1366, 2200
EcoT38I GRGCYC 2 cut(s) 854, 1365
ErhI CCWWGG 2 cut(s) 1366, 2200
Esp3I CGTCTC 1 cut(s) 2353
FaeI CATG 6 cut(s) 207, 1601, 1751, 2614, 2753, 2878
FaqI GGGAC 2 cut(s) 1810, 2863
FatI CATG 6 cut(s) 203, 1597, 1747, 2610, 2749, 2874
FauI CCCGC 2 cut(s) 1809, 2569
FauNDI CATATG 1 cut(s) 266
FbaI TGATCA 1 cut(s) 2338
FblI GTMKAC 2 cut(s) 948, 1454
Fnu4HI GCNGC 6 cut(s) 216, 426, 1611, 1804, 1842, 2190
FokI GGATG 4 cut(s) 2179, 2489, 2857, 3011
FriOI GRGCYC 2 cut(s) 854, 1365
Fsp4HI GCNGC 6 cut(s) 216, 426, 1611, 1804, 1842, 2190
FspBI CTAG 8 cut(s) 575, 681, 1127, 1896, 2412, 2774, 2784, 3023
GlaI GCGC 1 cut(s) 1815
GluI GCNGC 6 cut(s) 216, 426, 1611, 1804, 1842, 2190
GsuI CTGGAG 2 cut(s) 231, 2342
HaeIII GGCC 5 cut(s) 170, 1272, 2474, 2686, 3096
HapII CCGG 6 cut(s) 176, 195, 1620, 1859, 2600, 2937
HhaI GCGC 1 cut(s) 1816
Hin1II CATG 6 cut(s) 207, 1601, 1751, 2614, 2753, 2878
Hin6I GCGC 1 cut(s) 1814
HinP1I GCGC 1 cut(s) 1814
HincII GTYRAC 1 cut(s) 2382
HindII GTYRAC 1 cut(s) 2382
HindIII AAGCTT 3 cut(s) 734, 2108, 2534
HpaII CCGG 6 cut(s) 176, 195, 1620, 1859, 2600, 2937
HphI GGTGA 7 cut(s) 370, 641, 2720, 2847, 2971, 3007, 3093
Hpy166II GTNNAC 9 cut(s) 949, 1208, 1455, 1579, 2382, 2458, 2618, 2779, 2844
Hpy8I GTNNAC 9 cut(s) 949, 1208, 1455, 1579, 2382, 2458, 2618, 2779, 2844
Hpy99I CGWCG 1 cut(s) 2021
HpyCH4III ACNGT 7 cut(s) 463, 1576, 1876, 2333, 2923, 2977, 3013
HpyCH4IV ACGT 4 cut(s) 1322, 1639, 2362, 2386
HpyF10VI GCNNNNNNNGC 9 cut(s) 104, 224, 297, 431, 571, 1269, 1841, 1850, 3093
HpySE526I ACGT 4 cut(s) 1322, 1639, 2362, 2386
Hsp92II CATG 6 cut(s) 207, 1601, 1751, 2614, 2753, 2878
HspAI GCGC 1 cut(s) 1814
Kpn2I TCCGGA 1 cut(s) 175
Ksp22I TGATCA 1 cut(s) 2338
Kzo9I GATC 4 cut(s) 524, 1424, 2338, 2695
LguI GCTCTTC 2 cut(s) 859, 2016
LmnI GCTCC 7 cut(s) 82, 88, 178, 212, 849, 1134, 2307
Lsp1109I GCAGC 6 cut(s) 202, 437, 1597, 1790, 1853, 2201
LweI GCATC 4 cut(s) 54, 477, 1100, 2201
MabI ACCWGGT 1 cut(s) 2259
MaeI CTAG 8 cut(s) 575, 681, 1127, 1896, 2412, 2774, 2784, 3023
MaeII ACGT 4 cut(s) 1322, 1639, 2362, 2386
MalI GATC 4 cut(s) 526, 1426, 2340, 2697
MboI GATC 4 cut(s) 524, 1424, 2338, 2695
MfeI CAATTG 2 cut(s) 2180, 2744
MflI RGATCY 1 cut(s) 1424
MhlI GDGCHC 3 cut(s) 854, 1365, 2846
MlyI GAGTC 2 cut(s) 1001, 2774
MmeI TCCRAC 3 cut(s) 1402, 1916, 2023
MroI TCCGGA 1 cut(s) 175
MroXI GAANNNNTTC 2 cut(s) 584, 2896
MslI CAYNNNNRTG 1 cut(s) 2463
MspA1I CMGCKG 1 cut(s) 967
MspI CCGG 6 cut(s) 176, 195, 1620, 1859, 2600, 2937
MspR9I CCNGG 5 cut(s) 1275, 1621, 1661, 2261, 2937
MunI CAATTG 2 cut(s) 2180, 2744
Mva1269I GAATGC 4 cut(s) 844, 1137, 1665, 2898
MvaI CCWGG 3 cut(s) 1275, 1661, 2261
MvnI CGCG 1 cut(s) 1816
MwoI GCNNNNNNNGC 9 cut(s) 104, 224, 297, 431, 571, 1269, 1841, 1850, 3093
NciI CCSGG 2 cut(s) 1621, 2937
NdeI CATATG 1 cut(s) 266
NdeII GATC 4 cut(s) 524, 1424, 2338, 2695
NlaIII CATG 6 cut(s) 207, 1601, 1751, 2614, 2753, 2878
NlaIV GGNNCC 3 cut(s) 13, 1069, 2303
NmuCI GTSAC 5 cut(s) 269, 1387, 2914, 2977, 3013
NspI RCATGY 1 cut(s) 1601
NspV TTCGAA 1 cut(s) 2449
PciI ACATGT 1 cut(s) 1597
PciSI GCTCTTC 2 cut(s) 859, 2016
PctI GAATGC 4 cut(s) 844, 1137, 1665, 2898
PdmI GAANNNNTTC 2 cut(s) 584, 2896
PfeI GAWTC 8 cut(s) 163, 634, 923, 1278, 1493, 1906, 2277, 2438
PflMI CCANNNNNTGG 1 cut(s) 209
PkrI GCNGC 6 cut(s) 217, 427, 1612, 1805, 1843, 2191
PleI GAGTC 2 cut(s) 1001, 2774
PpsI GAGTC 2 cut(s) 1001, 2774
PpuMI RGGWCCY 3 cut(s) 413, 773, 1310
PscI ACATGT 1 cut(s) 1597
PshAI GACNNNNGTC 1 cut(s) 2639
PshBI ATTAAT 1 cut(s) 1299
PsiI TTATAA 1 cut(s) 1287
Psp124BI GAGCTC 1 cut(s) 854
Psp5II RGGWCCY 3 cut(s) 413, 773, 1310
Psp6I CCWGG 3 cut(s) 1273, 1659, 2259
PspGI CCWGG 3 cut(s) 1273, 1659, 2259
PspN4I GGNNCC 3 cut(s) 13, 1069, 2303
PspPPI RGGWCCY 3 cut(s) 413, 773, 1310
PsrI GAACNNNNNNTAC 2 cut(s) 1941, 1973
PstI CTGCAG 2 cut(s) 427, 2191
PsuI RGATCY 1 cut(s) 1424
PvuII CAGCTG 1 cut(s) 967
RseI CAYNNNNRTG 1 cut(s) 2463
SacI GAGCTC 1 cut(s) 854
SapI GCTCTTC 2 cut(s) 859, 2016
SatI GCNGC 6 cut(s) 216, 426, 1611, 1804, 1842, 2190
Sau3AI GATC 4 cut(s) 524, 1424, 2338, 2695
ScaI AGTACT 2 cut(s) 1950, 3010
SchI GAGTC 2 cut(s) 1001, 2774
ScrFI CCNGG 5 cut(s) 1275, 1621, 1661, 2261, 2937
SduI GDGCHC 3 cut(s) 854, 1365, 2846
SexAI ACCWGGT 1 cut(s) 2259
SfaNI GCATC 4 cut(s) 54, 477, 1100, 2201
SfcI CTRYAG 3 cut(s) 423, 2137, 2187
SfuI TTCGAA 1 cut(s) 2449
SinI GGWCC 7 cut(s) 413, 773, 1310, 1370, 1829, 2045, 2129
SmiMI CAYNNNNRTG 1 cut(s) 2463
SmlI CTYRAG 6 cut(s) 66, 93, 123, 745, 1556, 1583
SmoI CTYRAG 6 cut(s) 66, 93, 123, 745, 1556, 1583
SpeI ACTAGT 2 cut(s) 1895, 2773
SsiI CCGC 4 cut(s) 627, 1816, 2121, 2576
SspI AATATT 2 cut(s) 916, 2482
SspMI CTAG 8 cut(s) 575, 681, 1127, 1896, 2412, 2774, 2784, 3023
SstI GAGCTC 1 cut(s) 854
StyD4I CCNGG 5 cut(s) 1273, 1619, 1659, 2259, 2935
StyI CCWWGG 2 cut(s) 1366, 2200
TaaI ACNGT 7 cut(s) 463, 1576, 1876, 2333, 2923, 2977, 3013
TaiI ACGT 4 cut(s) 1325, 1642, 2365, 2389
TaqI TCGA 4 cut(s) 836, 1909, 2449, 2730
TatI WGTACW 4 cut(s) 1948, 2455, 3008, 3080
TfiI GAWTC 8 cut(s) 163, 634, 923, 1278, 1493, 1906, 2277, 2438
TscAI CASTG 8 cut(s) 118, 214, 402, 1222, 1438, 1855, 2290, 2683
TseFI GTSAC 5 cut(s) 269, 1387, 2914, 2977, 3013
TseI GCWGC 6 cut(s) 215, 425, 1610, 1803, 1841, 2189
Tsp45I GTSAC 5 cut(s) 269, 1387, 2914, 2977, 3013
TspDTI ATGAA 8 cut(s) 706, 893, 1368, 1518, 1855, 2112, 2766, 3107
TspGWI ACGGA 1 cut(s) 2289
TspRI CASTG 8 cut(s) 118, 214, 402, 1222, 1438, 1855, 2290, 2683
Van91I CCANNNNNTGG 1 cut(s) 209
VneI GTGCAC 1 cut(s) 2842
VpaK11BI GGWCC 7 cut(s) 413, 773, 1310, 1370, 1829, 2045, 2129
VspI ATTAAT 1 cut(s) 1299
XapI RAATTY 9 cut(s) 139, 233, 388, 580, 668, 1625, 2689, 2795, 2957
XbaI TCTAGA 2 cut(s) 1126, 2783
XceI RCATGY 1 cut(s) 1601
XcmI CCANNNNNNNNNTGG 2 cut(s) 357, 388
XmiI GTMKAC 2 cut(s) 948, 1454
XmnI GAANNNNTTC 2 cut(s) 584, 2896
XspI CTAG 8 cut(s) 575, 681, 1127, 1896, 2412, 2774, 2784, 3023
ZrmI AGTACT 2 cut(s) 1950, 3010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.