Rmu_sc0014538.1_g000007
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014538.1
Physical Location & Seq
Reverse (-)
45944 .. 47722
1779 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014538.1_g000007.1.cds

Sequence Viewer

Length: 1056 bp
atgtacacgaacggttcctgtttggcagattcgggtgctctaaatgatggaagagtaattgccgtaaaacaattgtctgcttcatcccaccaaggaaagaaccagtttgtgactgagattgccactatatcttctgtgcgacacaataacctagtaaagttgtatggattctgcaccgagggagccaaacggctccttgtctatgagtatctggagaacaagagtcttgatcaagcattatttgggaaaagaaccttgcatcttgattggccgacacgttttgatatatgcttgggcgtagctagaggtttaacttatcttcatgaagaatcaaggcttcgaattgtacacagagatgtgaaggcaagtaacattctgctcgactctaatctcattgccaaaatatcagattttggtttggcgaagcattatgatgataaaaagacccacatgagtactcgggttgcaggaacaattgggtatcttgcaccggaatatgctatgcgtggacacctgacagagaagacagatgtgtttgcttatggtgttgtcattctagaaattgtcagcggtaggccaaattctgatccaagtttggaaggcgatatggtttatcttcttgaattggcttggaacttgcatgaaaacagacgtgaagttgatctagtagactctagattatccgaattcaatgaggaagaagcaagacgaattatcaacataggacttttgtgcactcaatcatcaccaatgctacgaccacctatgtctcgcgtgatcggaatgcttgcaggagatattgaagtgacttctgctatttcaaagcctggttacttgacagactggagatttgatgatgtaactactatcaccagccaaacgaaatttggtgatgggagtactggcaacagtctaggaactgatatgtcaactagaggaactgacttcagcttttacaagtcatcggcaagtacaagcgtgatggagaatgcagggcaattacctttaaatgctactctttccatactcaataatacaaatggtgatggtagatga

Protein Analysis

351

Amino Acids

38.8

Weight (kDa)

6.01

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 669
AccII CGCG 1 cut(s) 774
AciI CCGC 1 cut(s) 570
AclWI GGATC 1 cut(s) 581
AcoI YGGCCR 1 cut(s) 269
AcsI RAATTY 3 cut(s) 580, 686, 884
AcuI CTGAAG 1 cut(s) 931
AfaI GTAC 5 cut(s) 5, 348, 457, 901, 973
AflIII ACRYGT 1 cut(s) 275
AgsI TTSAA 4 cut(s) 623, 691, 803, 822
AjiI CACGTC 1 cut(s) 653
AjnI CCWGG 1 cut(s) 826
AluBI AGCT 2 cut(s) 302, 951
AluI AGCT 2 cut(s) 302, 951
Alw21I GWGCWC 2 cut(s) 40, 737
Alw26I GTCTC 1 cut(s) 774
Alw44I GTGCAC 1 cut(s) 733
AlwI GGATC 1 cut(s) 581
Ama87I CYCGRG 1 cut(s) 459
AoxI GGCC 2 cut(s) 269, 575
ApaLI GTGCAC 1 cut(s) 733
ApoI RAATTY 3 cut(s) 580, 686, 884
ArsI GACNNNNNNTTYG 2 cut(s) 833, 865
AsuHPI GGTGA 4 cut(s) 738, 862, 902, 1055
AsuII TTCGAA 1 cut(s) 340
AvaI CYCGRG 1 cut(s) 459
BaeGI GKGCMC 1 cut(s) 737
BbsI GAAGAC 1 cut(s) 530
Bbv12I GWGCWC 2 cut(s) 40, 737
BccI CCATC 4 cut(s) 41, 887, 976, 1040
BceAI ACGGC 2 cut(s) 47, 206
BciT130I CCWGG 1 cut(s) 828
BclI TGATCA 1 cut(s) 229
BcoDI GTCTC 1 cut(s) 774
BfaI CTAG 7 cut(s) 152, 303, 557, 665, 675, 914, 933
BmcAI AGTACT 2 cut(s) 457, 901
Bme1390I CCNGG 1 cut(s) 828
BmeT110I CYCGRG 1 cut(s) 459
BmgBI CACGTC 1 cut(s) 653
BmiI GGNNCC 3 cut(s) 16, 184, 194
BmrFI CCNGG 1 cut(s) 828
BmsI GCATC 1 cut(s) 268
BpiI GAAGAC 1 cut(s) 530
BpmI CTGGAG 2 cut(s) 233, 865
Bpu14I TTCGAA 1 cut(s) 340
BsaJI CCNNGG 2 cut(s) 91, 177
BsaWI WCCGGW 1 cut(s) 490
Bse1I ACTGG 3 cut(s) 103, 848, 907
Bse3DI GCAATG 1 cut(s) 393
BseBI CCWGG 1 cut(s) 828
BseDI CCNNGG 2 cut(s) 91, 177
BseGI GGATG 1 cut(s) 83
BseMI GCAATG 1 cut(s) 393
BseMII CTCAG 1 cut(s) 105
BseNI ACTGG 3 cut(s) 103, 848, 907
BseSI GKGCMC 1 cut(s) 737
BsgI GTGCAG 1 cut(s) 157
Bsh1236I CGCG 1 cut(s) 774
BshFI GGCC 2 cut(s) 271, 577
BsiHKAI GWGCWC 2 cut(s) 40, 737
BsiHKCI CYCGRG 1 cut(s) 459
BsiSI CCGG 1 cut(s) 491
BsmAI GTCTC 1 cut(s) 774
BsmI GAATGC 2 cut(s) 789, 994
BsnI GGCC 2 cut(s) 271, 577
BsoBI CYCGRG 1 cut(s) 459
Bsp119I TTCGAA 1 cut(s) 340
Bsp1286I GDGCHC 2 cut(s) 40, 737
Bsp1407I TGTACA 2 cut(s) 3, 346
Bsp143I GATC 4 cut(s) 229, 586, 661, 777
BspACI CCGC 1 cut(s) 570
BspANI GGCC 2 cut(s) 271, 577
BspCNI CTCAG 1 cut(s) 106
BspFNI CGCG 1 cut(s) 774
BspHI TCATGA 1 cut(s) 322
BspLI GGNNCC 3 cut(s) 16, 184, 194
BspPI GGATC 1 cut(s) 581
BspT104I TTCGAA 1 cut(s) 340
BsrDI GCAATG 1 cut(s) 393
BsrGI TGTACA 2 cut(s) 3, 346
BsrI ACTGG 3 cut(s) 103, 848, 907
BssECI CCNNGG 2 cut(s) 91, 177
BssMI GATC 4 cut(s) 229, 586, 661, 777
BssT1I CCWWGG 1 cut(s) 91
Bst2UI CCWGG 1 cut(s) 828
Bst4CI ACNGT 2 cut(s) 14, 911
Bst6I CTCTTC 1 cut(s) 46
BstAUI TGTACA 2 cut(s) 3, 346
BstBI TTCGAA 1 cut(s) 340
BstC8I GCNNGC 1 cut(s) 789
BstDEI CTNAG 1 cut(s) 114
BstF5I GGATG 1 cut(s) 83
BstFNI CGCG 1 cut(s) 774
BstKTI GATC 4 cut(s) 232, 589, 664, 780
BstMAI GTCTC 1 cut(s) 774
BstMBI GATC 4 cut(s) 229, 586, 661, 777
BstNI CCWGG 1 cut(s) 828
BstSCI CCNGG 1 cut(s) 826
BstSLI GKGCMC 1 cut(s) 737
BstUI CGCG 1 cut(s) 774
BstV2I GAAGAC 1 cut(s) 530
BsuRI GGCC 2 cut(s) 271, 577
BtrI CACGTC 1 cut(s) 653
BtsCI GGATG 1 cut(s) 83
Cac8I GCNNGC 1 cut(s) 789
CciI TCATGA 1 cut(s) 322
Csp6I GTAC 5 cut(s) 4, 347, 456, 900, 972
CviAII CATG 3 cut(s) 323, 451, 641
CviQI GTAC 5 cut(s) 4, 347, 456, 900, 972
DdeI CTNAG 1 cut(s) 114
DpnI GATC 4 cut(s) 231, 588, 663, 779
DpnII GATC 4 cut(s) 229, 586, 661, 777
DraI TTTAAA 1 cut(s) 1008
EaeI YGGCCR 1 cut(s) 269
Eam1104I CTCTTC 1 cut(s) 46
EarI CTCTTC 1 cut(s) 46
Eco130I CCWWGG 1 cut(s) 91
Eco57I CTGAAG 1 cut(s) 931
Eco88I CYCGRG 1 cut(s) 459
EcoRI GAATTC 1 cut(s) 686
EcoRII CCWGG 1 cut(s) 826
EcoT14I CCWWGG 1 cut(s) 91
ErhI CCWWGG 1 cut(s) 91
FaeI CATG 3 cut(s) 326, 454, 644
FatI CATG 3 cut(s) 322, 450, 640
FbaI TGATCA 1 cut(s) 229
FblI GTMKAC 1 cut(s) 669
FokI GGATG 1 cut(s) 70
FspBI CTAG 7 cut(s) 152, 303, 557, 665, 675, 914, 933
GsuI CTGGAG 2 cut(s) 233, 865
HaeIII GGCC 2 cut(s) 271, 577
HapII CCGG 1 cut(s) 491
Hin1II CATG 3 cut(s) 326, 454, 644
HincII GTYRAC 1 cut(s) 930
HindII GTYRAC 1 cut(s) 930
HinfI GANTC 6 cut(s) 29, 168, 223, 329, 383, 671
HpaII CCGG 1 cut(s) 491
HphI GGTGA 4 cut(s) 738, 862, 902, 1055
Hpy166II GTNNAC 6 cut(s) 6, 349, 509, 670, 735, 930
Hpy188I TCNGA 4 cut(s) 409, 586, 685, 782
Hpy188III TCNNGA 7 cut(s) 212, 227, 263, 323, 557, 620, 675
Hpy8I GTNNAC 6 cut(s) 6, 349, 509, 670, 735, 930
HpyAV CCTTC 2 cut(s) 355, 593
HpyCH4III ACNGT 2 cut(s) 14, 911
HpyCH4IV ACGT 2 cut(s) 277, 652
HpyCH4V TGCA 8 cut(s) 174, 259, 467, 488, 640, 735, 791, 992
HpyF3I CTNAG 1 cut(s) 114
HpySE526I ACGT 2 cut(s) 277, 652
Hsp92II CATG 3 cut(s) 326, 454, 644
Ksp22I TGATCA 1 cut(s) 229
Kzo9I GATC 4 cut(s) 229, 586, 661, 777
LmnI GCTCC 2 cut(s) 182, 198
LweI GCATC 1 cut(s) 268
MaeI CTAG 7 cut(s) 152, 303, 557, 665, 675, 914, 933
MaeII ACGT 2 cut(s) 277, 652
MaeIII GTNAC 5 cut(s) 109, 368, 805, 830, 859
MalI GATC 4 cut(s) 231, 588, 663, 779
MboI GATC 4 cut(s) 229, 586, 661, 777
MboII GAAGA 7 cut(s) 63, 123, 311, 338, 535, 608, 710
MfeI CAATTG 2 cut(s) 71, 474
MhlI GDGCHC 2 cut(s) 40, 737
MlyI GAGTC 3 cut(s) 232, 377, 665
MnlI CCTC 4 cut(s) 172, 299, 688, 929
MseI TTAA 2 cut(s) 311, 1007
MslI CAYNNNNRTG 2 cut(s) 354, 432
MspA1I CMGCKG 1 cut(s) 570
MspI CCGG 1 cut(s) 491
MspR9I CCNGG 1 cut(s) 828
MunI CAATTG 2 cut(s) 71, 474
Mva1269I GAATGC 2 cut(s) 789, 994
MvaI CCWGG 1 cut(s) 828
MvnI CGCG 1 cut(s) 774
NdeII GATC 4 cut(s) 229, 586, 661, 777
NlaIII CATG 3 cut(s) 326, 454, 644
NlaIV GGNNCC 3 cut(s) 16, 184, 194
NmuCI GTSAC 2 cut(s) 109, 805
NspV TTCGAA 1 cut(s) 340
PagI TCATGA 1 cut(s) 322
PctI GAATGC 2 cut(s) 789, 994
PfeI GAWTC 3 cut(s) 29, 168, 329
PleI GAGTC 3 cut(s) 231, 377, 665
PpsI GAGTC 3 cut(s) 231, 377, 665
Psp6I CCWGG 1 cut(s) 826
PspGI CCWGG 1 cut(s) 826
PspN4I GGNNCC 3 cut(s) 16, 184, 194
RsaI GTAC 5 cut(s) 5, 348, 457, 901, 973
RsaNI GTAC 5 cut(s) 4, 347, 456, 900, 972
RseI CAYNNNNRTG 2 cut(s) 354, 432
SaqAI TTAA 2 cut(s) 311, 1007
Sau3AI GATC 4 cut(s) 229, 586, 661, 777
ScaI AGTACT 2 cut(s) 457, 901
SchI GAGTC 3 cut(s) 232, 377, 665
ScrFI CCNGG 1 cut(s) 828
SduI GDGCHC 2 cut(s) 40, 737
SfaNI GCATC 1 cut(s) 268
SfuI TTCGAA 1 cut(s) 340
SmiMI CAYNNNNRTG 2 cut(s) 354, 432
SsiI CCGC 1 cut(s) 570
SspMI CTAG 7 cut(s) 152, 303, 557, 665, 675, 914, 933
StyD4I CCNGG 1 cut(s) 826
StyI CCWWGG 1 cut(s) 91
TaaI ACNGT 2 cut(s) 14, 911
TaiI ACGT 2 cut(s) 280, 655
TaqI TCGA 2 cut(s) 340, 381
TatI WGTACW 5 cut(s) 3, 346, 455, 899, 971
TfiI GAWTC 3 cut(s) 29, 168, 329
Tru1I TTAA 2 cut(s) 311, 1007
Tru9I TTAA 2 cut(s) 311, 1007
TseFI GTSAC 2 cut(s) 109, 805
Tsp45I GTSAC 2 cut(s) 109, 805
TspDTI ATGAA 4 cut(s) 72, 311, 339, 657
VneI GTGCAC 1 cut(s) 733
XapI RAATTY 3 cut(s) 580, 686, 884
XbaI TCTAGA 2 cut(s) 556, 674
XcmI CCANNNNNNNNNTGG 1 cut(s) 884
XmiI GTMKAC 1 cut(s) 669
XspI CTAG 7 cut(s) 152, 303, 557, 665, 675, 914, 933
ZrmI AGTACT 2 cut(s) 457, 901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.