RchiOBHm_Chr2g0142621
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
60211020 .. 60214997
3978 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51276

Sequence Viewer

Length: 927 bp
ATGGGGCTGATTCTGGGGATTGTTGTTGGTGGTGGAGTACTTTTGATTCTATTGTTGTTGGTTTTCTGTATAGTTCAAAGAAGAAAAAAGATTAACACCAGTAAAAATGAAGATCTGTTGGGAATAGATATTGGACCACTCACTTTCAGTTTTTCAGAGCTAAAGACAGCTACAGATGACTTTAGTCCAGCGAATAAGATTGGAGAGGGAGGATTTGGACCTGTCTATAAAGGTACTCTTAATGATGGAAGAGTAATTGTCGTGAAGCAATTGTCTGCAGCATCGCAGCAAGGAAAAAATGAGTTTGTAGTGAATTTGCATGGATTCTGCACTGAGGGAGTTAAACGGCTCCTTGTCTATGAGTATCTGGAAAACAAGAGTCTTGATCATGCATTATTTGGAAAAAGAAGTTTGAATCTTGATTGGTCATCGAGATTTGATATATGCTTGGGCGTGGCTAAAGGTTTGACTTATCTCCATGAGGAATCAAGGGTACGAATTGTACACAGAGATGTGAAGGCCAGTAATATTCTGCTCGACTCTAATCTCGTCCCCAAAAAATATCAGATTTCGGTTTGGCCAAGCTTTATGATAATAAAAAGACCCACATCAGTACTCTTATTGCGGGAACAATGTATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTAACAGAGAAGACTGTTGTGTTTGCCTTTGGTGTTCTTGCTCTAGAAATTGTCAGTGGTAGACCAAATTCTGACCGGAGCTTGGAAGGCGAGATGATTTATCTTCTCGAATGGGCTTGGCACTTGCATGAAAACAAACGCGAAGTTGAACTAGTACTTCAGGTGGATGCAGATATTTATGGATCCGCTAAAAAGACGCTTACCCACAGGAGATTGGATGTCTATCATGGAAACTGCTATGCGTATGTATAA

Protein Analysis

308

Amino Acids

34.6

Weight (kDa)

8.67

Isoelectric Point (pI)

39.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 64 - 250 1.1e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 65 - 247 9.2e-23 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 736
AccII CGCG 1 cut(s) 816
AciI CCGC 2 cut(s) 625, 861
AclWI GGATC 2 cut(s) 852, 865
AcoI YGGCCR 1 cut(s) 578
AcsI RAATTY 2 cut(s) 313, 742
AcuI CTGAAG 1 cut(s) 818
AfaI GTAC 6 cut(s) 39, 235, 495, 504, 615, 831
AfiI CCNNNNNNNGG 1 cut(s) 757
AgsI TTSAA 3 cut(s) 77, 415, 824
AhlI ACTAGT 1 cut(s) 826
AjuI GAANNNNNNNTTGG 2 cut(s) 621, 653
AluBI AGCT 4 cut(s) 160, 170, 585, 756
AluI AGCT 4 cut(s) 160, 170, 585, 756
AlwI GGATC 2 cut(s) 852, 865
AoxI GGCC 2 cut(s) 519, 578
ApeKI GCWGC 2 cut(s) 278, 286
ApoI RAATTY 2 cut(s) 313, 742
AspS9I GGNCC 2 cut(s) 134, 218
AvaII GGWCC 2 cut(s) 134, 218
BalI TGGCCA 1 cut(s) 580
BamHI GGATCC 1 cut(s) 857
BbsI GAAGAC 1 cut(s) 692
BbvI GCAGC 2 cut(s) 290, 298
BccI CCATC 1 cut(s) 239
BceAI ACGGC 1 cut(s) 362
BclI TGATCA 1 cut(s) 385
BcuI ACTAGT 1 cut(s) 826
BfaI CTAG 2 cut(s) 719, 827
BfmI CTRYAG 2 cut(s) 171, 276
BglII AGATCT 1 cut(s) 112
BisI GCNGC 2 cut(s) 279, 287
BlsI GCNGC 2 cut(s) 280, 288
BmcAI AGTACT 3 cut(s) 39, 615, 831
Bme18I GGWCC 2 cut(s) 134, 218
BmgT120I GGNCC 2 cut(s) 134, 218
BmiI GGNNCC 2 cut(s) 350, 859
BmsI GCATC 2 cut(s) 290, 832
BoxI GACNNNNGTC 1 cut(s) 183
BpiI GAAGAC 1 cut(s) 692
BsaBI GATNNNNATC 1 cut(s) 897
BsaWI WCCGGW 2 cut(s) 652, 750
Bsc4I CCNNNNNNNGG 1 cut(s) 757
Bse1I ACTGG 2 cut(s) 99, 522
Bse8I GATNNNNATC 1 cut(s) 897
BseGI GGATG 2 cut(s) 847, 898
BseJI GATNNNNATC 1 cut(s) 897
BseLI CCNNNNNNNGG 1 cut(s) 757
BseMII CTCAG 1 cut(s) 324
BseNI ACTGG 2 cut(s) 99, 522
BseXI GCAGC 2 cut(s) 290, 298
BsgI GTGCAG 1 cut(s) 313
Bsh1236I CGCG 1 cut(s) 816
BshFI GGCC 2 cut(s) 521, 580
BsiSI CCGG 2 cut(s) 653, 751
BslFI GGGAC 1 cut(s) 536
BslI CCNNNNNNNGG 1 cut(s) 757
BsmFI GGGAC 1 cut(s) 536
BsnI GGCC 2 cut(s) 521, 580
Bsp1407I TGTACA 1 cut(s) 502
Bsp143I GATC 3 cut(s) 112, 385, 857
BspACI CCGC 2 cut(s) 625, 861
BspANI GGCC 2 cut(s) 521, 580
BspCNI CTCAG 1 cut(s) 325
BspFNI CGCG 1 cut(s) 816
BspLI GGNNCC 2 cut(s) 350, 859
BspMAI CTGCAG 1 cut(s) 280
BspPI GGATC 2 cut(s) 852, 865
BsrGI TGTACA 1 cut(s) 502
BsrI ACTGG 2 cut(s) 99, 522
BssMI GATC 3 cut(s) 112, 385, 857
Bst4CI ACNGT 1 cut(s) 691
Bst6I CTCTTC 1 cut(s) 244
BstAUI TGTACA 1 cut(s) 502
BstDEI CTNAG 1 cut(s) 333
BstF5I GGATG 2 cut(s) 847, 898
BstFNI CGCG 1 cut(s) 816
BstKTI GATC 3 cut(s) 115, 388, 860
BstMBI GATC 3 cut(s) 112, 385, 857
BstMWI GCNNNNNNNGC 1 cut(s) 762
BstPAI GACNNNNGTC 1 cut(s) 183
BstSFI CTRYAG 2 cut(s) 171, 276
BstUI CGCG 1 cut(s) 816
BstV1I GCAGC 2 cut(s) 290, 298
BstV2I GAAGAC 1 cut(s) 692
BstX2I RGATCY 2 cut(s) 112, 857
BstYI RGATCY 2 cut(s) 112, 857
BsuRI GGCC 2 cut(s) 521, 580
BtgZI GCGATG 1 cut(s) 267
BtsCI GGATG 2 cut(s) 847, 898
BtsIMutI CAGTG 2 cut(s) 330, 736
Cfr13I GGNCC 2 cut(s) 134, 218
CseI GACGC 1 cut(s) 880
Csp6I GTAC 6 cut(s) 38, 234, 494, 503, 614, 830
CviAII CATG 6 cut(s) 320, 389, 479, 664, 803, 902
CviQI GTAC 6 cut(s) 38, 234, 494, 503, 614, 830
DdeI CTNAG 1 cut(s) 333
DpnI GATC 3 cut(s) 114, 387, 859
DpnII GATC 3 cut(s) 112, 385, 857
EaeI YGGCCR 1 cut(s) 578
Eam1104I CTCTTC 1 cut(s) 244
EarI CTCTTC 1 cut(s) 244
Eco47I GGWCC 2 cut(s) 134, 218
Eco57I CTGAAG 1 cut(s) 818
EcoT22I ATGCAT 1 cut(s) 394
FaeI CATG 6 cut(s) 323, 392, 482, 667, 806, 905
FalI AAGNNNNNCTT 2 cut(s) 222, 254
FaqI GGGAC 1 cut(s) 536
FatI CATG 6 cut(s) 319, 388, 478, 663, 802, 901
FauI CCCGC 1 cut(s) 618
FbaI TGATCA 1 cut(s) 385
FblI GTMKAC 1 cut(s) 736
Fnu4HI GCNGC 2 cut(s) 279, 287
FokI GGATG 2 cut(s) 854, 905
Fsp4HI GCNGC 2 cut(s) 279, 287
FspBI CTAG 2 cut(s) 719, 827
GluI GCNGC 2 cut(s) 279, 287
HaeIII GGCC 2 cut(s) 521, 580
HapII CCGG 2 cut(s) 653, 751
HgaI GACGC 1 cut(s) 880
Hin1II CATG 6 cut(s) 323, 392, 482, 667, 806, 905
HindIII AAGCTT 1 cut(s) 583
HinfI GANTC 7 cut(s) 10, 46, 324, 379, 415, 485, 539
HpaII CCGG 2 cut(s) 653, 751
Hpy166II GTNNAC 3 cut(s) 505, 671, 737
Hpy188I TCNGA 3 cut(s) 157, 567, 748
Hpy188III TCNNGA 7 cut(s) 262, 368, 383, 419, 432, 719, 782
Hpy8I GTNNAC 3 cut(s) 505, 671, 737
HpyAV CCTTC 2 cut(s) 511, 755
HpyCH4III ACNGT 1 cut(s) 691
HpyCH4V TGCA 7 cut(s) 278, 319, 330, 392, 650, 802, 845
HpyF10VI GCNNNNNNNGC 1 cut(s) 762
HpyF3I CTNAG 1 cut(s) 333
Hsp92II CATG 6 cut(s) 323, 392, 482, 667, 806, 905
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 3 cut(s) 112, 385, 857
LmnI GCTCC 2 cut(s) 354, 753
LpnPI CCDG 9 cut(s) 112, 201, 234, 353, 535, 666, 764, 821, 868
Lsp1109I GCAGC 2 cut(s) 290, 298
LweI GCATC 2 cut(s) 290, 832
MaeI CTAG 2 cut(s) 719, 827
MalI GATC 3 cut(s) 114, 387, 859
MboI GATC 3 cut(s) 112, 385, 857
MboII GAAGA 5 cut(s) 93, 122, 261, 697, 770
MfeI CAATTG 1 cut(s) 269
MflI RGATCY 2 cut(s) 112, 857
MlsI TGGCCA 1 cut(s) 580
MluCI AATT 6 cut(s) 255, 269, 313, 498, 723, 742
MluNI TGGCCA 1 cut(s) 580
MlyI GAGTC 2 cut(s) 388, 533
MnlI CCTC 4 cut(s) 199, 203, 328, 475
Mox20I TGGCCA 1 cut(s) 580
Mph1103I ATGCAT 1 cut(s) 394
MscI TGGCCA 1 cut(s) 580
MseI TTAA 3 cut(s) 93, 240, 342
MslI CAYNNNNRTG 2 cut(s) 510, 801
Msp20I TGGCCA 1 cut(s) 580
MspI CCGG 2 cut(s) 653, 751
MunI CAATTG 1 cut(s) 269
MvnI CGCG 1 cut(s) 816
MwoI GCNNNNNNNGC 1 cut(s) 762
NdeII GATC 3 cut(s) 112, 385, 857
NlaIII CATG 6 cut(s) 323, 392, 482, 667, 806, 905
NlaIV GGNNCC 2 cut(s) 350, 859
NsiI ATGCAT 1 cut(s) 394
PfeI GAWTC 5 cut(s) 10, 46, 324, 415, 485
PkrI GCNGC 2 cut(s) 280, 288
PleI GAGTC 2 cut(s) 387, 533
PpsI GAGTC 2 cut(s) 387, 533
PshAI GACNNNNGTC 1 cut(s) 183
PspN4I GGNNCC 2 cut(s) 350, 859
PspPI GGNCC 2 cut(s) 134, 218
PstI CTGCAG 1 cut(s) 280
PsuI RGATCY 2 cut(s) 112, 857
RsaI GTAC 6 cut(s) 39, 235, 495, 504, 615, 831
RsaNI GTAC 6 cut(s) 38, 234, 494, 503, 614, 830
RseI CAYNNNNRTG 2 cut(s) 510, 801
SaqAI TTAA 3 cut(s) 93, 240, 342
SatI GCNGC 2 cut(s) 279, 287
Sau3AI GATC 3 cut(s) 112, 385, 857
Sau96I GGNCC 2 cut(s) 134, 218
ScaI AGTACT 3 cut(s) 39, 615, 831
SchI GAGTC 2 cut(s) 388, 533
SetI ASST 9 cut(s) 162, 172, 223, 235, 466, 587, 678, 758, 840
SfaNI GCATC 2 cut(s) 290, 832
SfcI CTRYAG 2 cut(s) 171, 276
SinI GGWCC 2 cut(s) 134, 218
SmiMI CAYNNNNRTG 2 cut(s) 510, 801
SpeI ACTAGT 1 cut(s) 826
Sse9I AATT 6 cut(s) 255, 269, 313, 498, 723, 742
SsiI CCGC 2 cut(s) 625, 861
SspI AATATT 1 cut(s) 529
SspMI CTAG 2 cut(s) 719, 827
TaaI ACNGT 1 cut(s) 691
TaqI TCGA 3 cut(s) 431, 537, 783
TasI AATT 6 cut(s) 255, 269, 313, 498, 723, 742
TatI WGTACW 4 cut(s) 37, 502, 613, 829
TfiI GAWTC 5 cut(s) 10, 46, 324, 415, 485
Tru1I TTAA 3 cut(s) 93, 240, 342
Tru9I TTAA 3 cut(s) 93, 240, 342
TscAI CASTG 2 cut(s) 337, 736
TseI GCWGC 2 cut(s) 278, 286
TspDTI ATGAA 2 cut(s) 123, 819
TspRI CASTG 2 cut(s) 337, 736
VpaK11BI GGWCC 2 cut(s) 134, 218
XapI RAATTY 2 cut(s) 313, 742
XbaI TCTAGA 1 cut(s) 718
XmiI GTMKAC 1 cut(s) 736
XspI CTAG 2 cut(s) 719, 827
ZrmI AGTACT 3 cut(s) 39, 615, 831
Zsp2I ATGCAT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.