Rmu_co8379171.1_g000001

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8379171.1
Physical Location & Seq
Reverse (-)
2 .. 1159
1158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8379171.1_g000001.1.cds

Sequence Viewer

Length: 790 bp
gtaactggaataatggatgtatttcaggaaacaacttgcatcttgattggcataccagattcaatatcttgttgggaacagcaagaggacttgcctatcttcatgaggagtcgaggccaaggattgtacatagagatgtcaaagccagtaatattttgcttgatgcagacctctgcccaaaaatatcagattttggactggcaaagctttatgatgatgagaaaacccacatcagcacccgggttgcagggacaataggctatttggcaccggagtatgcaatgcggggacatctgactgaaaaggctgatgtattcggttttggagttgtcattttggagactcttagtggcagaccaaacactgacaatgacttggatgccggagagatttatctccttgattgggcatggactctacatgaaaaaaatgagcgtttggggcttgtggatccgagactgaccgactttgatgaagaagaagcaaatagattgataagattagctttcctgtgtactcaggcatccccattgatgcggccatctatgtctcgtgtggtggccatgcttgctggagatattgaagtaggtaatgttatggcaaagccaagttatttgacagactgggatttcaaagatgtaacaggaagcttcttgattgatggtggtaccccctcaactgggatgactcaccccaacaatcagtctactggcatcacaaccggtgctaacaccggaattgacctgatgcagtctcctgtgaattctaatcattcattgctcactgggat

Protein Analysis

262

Amino Acids

28.87

Weight (kDa)

5.11

Isoelectric Point (pI)

32.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 667
AccB1I GGYRCC 2 cut(s) 267, 667
AccI GTMKAC 1 cut(s) 706
AciI CCGC 2 cut(s) 285, 537
AclWI GGATC 2 cut(s) 445, 458
AcoI YGGCCR 2 cut(s) 538, 560
AcsI RAATTY 1 cut(s) 762
AfaI GTAC 3 cut(s) 128, 516, 669
AfiI CCNNNNNNNGG 3 cut(s) 405, 679, 680
AgeI ACCGGT 1 cut(s) 721
AgsI TTSAA 3 cut(s) 63, 583, 633
AluBI AGCT 3 cut(s) 207, 505, 650
AluI AGCT 3 cut(s) 207, 505, 650
Alw26I GTCTC 4 cut(s) 334, 450, 554, 758
AlwI GGATC 2 cut(s) 445, 458
Ama87I CYCGRG 1 cut(s) 239
AoxI GGCC 3 cut(s) 115, 538, 560
ApoI RAATTY 1 cut(s) 762
AsiGI ACCGGT 1 cut(s) 721
Asp718I GGTACC 1 cut(s) 667
AsuC2I CCSGG 2 cut(s) 240, 241
AsuHPI GGTGA 1 cut(s) 682
AvaI CYCGRG 1 cut(s) 239
BalI TGGCCA 1 cut(s) 562
BamHI GGATCC 1 cut(s) 450
BanI GGYRCC 2 cut(s) 267, 667
BauI CACGAG 1 cut(s) 551
BccI CCATC 2 cut(s) 549, 655
BcnI CCSGG 2 cut(s) 240, 241
BcoDI GTCTC 4 cut(s) 334, 450, 554, 758
BisI GCNGC 1 cut(s) 538
BlsI GCNGC 1 cut(s) 539
Bme1390I CCNGG 2 cut(s) 240, 241
BmeT110I CYCGRG 1 cut(s) 239
BmiI GGNNCC 3 cut(s) 269, 452, 669
BmrFI CCNGG 2 cut(s) 240, 241
BmrI ACTGGG 2 cut(s) 633, 689
BmsI GCATC 7 cut(s) 48, 153, 369, 524, 532, 722, 737
BmuI ACTGGG 2 cut(s) 633, 689
BpmI CTGGAG 1 cut(s) 593
BpuMI CCSGG 2 cut(s) 240, 241
BsaJI CCNNGG 2 cut(s) 118, 239
BsaWI WCCGGW 3 cut(s) 270, 721, 733
Bsc4I CCNNNNNNNGG 3 cut(s) 405, 679, 680
Bse118I RCCGGY 1 cut(s) 721
Bse1I ACTGG 7 cut(s) 10, 146, 203, 628, 684, 714, 789
Bse3DI GCAATG 2 cut(s) 287, 775
BseDI CCNNGG 2 cut(s) 118, 239
BseGI GGATG 4 cut(s) 22, 384, 523, 689
BseLI CCNNNNNNNGG 3 cut(s) 405, 679, 680
BseMI GCAATG 2 cut(s) 287, 775
BseMII CTCAG 1 cut(s) 532
BseNI ACTGG 7 cut(s) 10, 146, 203, 628, 684, 714, 789
BseRI GAGGAG 1 cut(s) 121
BshFI GGCC 3 cut(s) 117, 540, 562
BshNI GGYRCC 2 cut(s) 267, 667
BshTI ACCGGT 1 cut(s) 721
BsiHKCI CYCGRG 1 cut(s) 239
BsiSI CCGG 5 cut(s) 240, 271, 383, 722, 734
BslFI GGGAC 2 cut(s) 264, 302
BslI CCNNNNNNNGG 3 cut(s) 405, 679, 680
BsmAI GTCTC 4 cut(s) 334, 450, 554, 758
BsmFI GGGAC 2 cut(s) 264, 302
BsnI GGCC 3 cut(s) 117, 540, 562
BsoBI CYCGRG 1 cut(s) 239
Bsp1407I TGTACA 1 cut(s) 126
Bsp143I GATC 1 cut(s) 450
BspACI CCGC 2 cut(s) 285, 537
BspANI GGCC 3 cut(s) 117, 540, 562
BspCNI CTCAG 1 cut(s) 531
BspHI TCATGA 1 cut(s) 102
BspLI GGNNCC 3 cut(s) 269, 452, 669
BspPI GGATC 2 cut(s) 445, 458
BspT107I GGYRCC 2 cut(s) 267, 667
BsrDI GCAATG 2 cut(s) 287, 775
BsrFI RCCGGY 1 cut(s) 721
BsrGI TGTACA 1 cut(s) 126
BsrI ACTGG 7 cut(s) 10, 146, 203, 628, 684, 714, 789
BssAI RCCGGY 1 cut(s) 721
BssECI CCNNGG 2 cut(s) 118, 239
BssMI GATC 1 cut(s) 450
BssSI CACGAG 1 cut(s) 551
BssT1I CCWWGG 1 cut(s) 118
Bst2BI CACGAG 1 cut(s) 551
BstAUI TGTACA 1 cut(s) 126
BstC8I GCNNGC 1 cut(s) 569
BstDEI CTNAG 2 cut(s) 346, 518
BstF5I GGATG 4 cut(s) 22, 384, 523, 689
BstKTI GATC 1 cut(s) 453
BstMAI GTCTC 4 cut(s) 334, 450, 554, 758
BstMBI GATC 1 cut(s) 450
BstMWI GCNNNNNNNGC 2 cut(s) 441, 568
BstSCI CCNGG 2 cut(s) 238, 239
BstX2I RGATCY 1 cut(s) 450
BstYI RGATCY 1 cut(s) 450
BsuRI GGCC 3 cut(s) 117, 540, 562
BtsCI GGATG 4 cut(s) 22, 384, 523, 689
BtsIMutI CAGTG 2 cut(s) 362, 782
Cac8I GCNNGC 1 cut(s) 569
CciI TCATGA 1 cut(s) 102
Cfr10I RCCGGY 1 cut(s) 721
Cfr9I CCCGGG 1 cut(s) 239
Csp6I GTAC 3 cut(s) 127, 515, 668
CspAI ACCGGT 1 cut(s) 721
CviAII CATG 4 cut(s) 103, 410, 421, 564
CviQI GTAC 3 cut(s) 127, 515, 668
DdeI CTNAG 2 cut(s) 346, 518
DpnI GATC 1 cut(s) 452
DpnII GATC 1 cut(s) 450
EaeI YGGCCR 2 cut(s) 538, 560
Eco130I CCWWGG 1 cut(s) 118
Eco88I CYCGRG 1 cut(s) 239
EcoRI GAATTC 1 cut(s) 762
EcoT14I CCWWGG 1 cut(s) 118
ErhI CCWWGG 1 cut(s) 118
FaeI CATG 4 cut(s) 106, 413, 424, 567
FalI AAGNNNNNCTT 2 cut(s) 489, 521
FaqI GGGAC 2 cut(s) 264, 302
FatI CATG 4 cut(s) 102, 409, 420, 563
FauI CCCGC 1 cut(s) 278
FblI GTMKAC 1 cut(s) 706
Fnu4HI GCNGC 1 cut(s) 538
FokI GGATG 4 cut(s) 29, 391, 510, 696
Fsp4HI GCNGC 1 cut(s) 538
GluI GCNGC 1 cut(s) 538
GsuI CTGGAG 1 cut(s) 593
HaeIII GGCC 3 cut(s) 117, 540, 562
HapII CCGG 5 cut(s) 240, 271, 383, 722, 734
Hin1II CATG 4 cut(s) 106, 413, 424, 567
HindIII AAGCTT 2 cut(s) 205, 648
HinfI GANTC 5 cut(s) 59, 109, 342, 414, 687
HpaII CCGG 5 cut(s) 240, 271, 383, 722, 734
HphI GGTGA 1 cut(s) 682
Hpy166II GTNNAC 2 cut(s) 515, 707
Hpy188I TCNGA 3 cut(s) 189, 296, 455
Hpy188III TCNNGA 4 cut(s) 26, 43, 103, 654
Hpy8I GTNNAC 2 cut(s) 515, 707
HpyCH4V TGCA 5 cut(s) 39, 166, 247, 280, 750
HpyF10VI GCNNNNNNNGC 2 cut(s) 441, 568
HpyF3I CTNAG 2 cut(s) 346, 518
Hsp92II CATG 4 cut(s) 106, 413, 424, 567
KpnI GGTACC 1 cut(s) 671
Kzo9I GATC 1 cut(s) 450
LweI GCATC 7 cut(s) 48, 153, 369, 524, 532, 722, 737
MaeIII GTNAC 1 cut(s) 639
MalI GATC 1 cut(s) 452
MboI GATC 1 cut(s) 450
MboII GAAGA 3 cut(s) 91, 487, 490
MflI RGATCY 1 cut(s) 450
MlsI TGGCCA 1 cut(s) 562
MluCI AATT 2 cut(s) 737, 762
MluNI TGGCCA 1 cut(s) 562
MlyI GAGTC 4 cut(s) 118, 336, 408, 681
MnlI CCTC 5 cut(s) 79, 99, 107, 181, 684
Mox20I TGGCCA 1 cut(s) 562
MscI TGGCCA 1 cut(s) 562
MslI CAYNNNNRTG 1 cut(s) 134
Msp20I TGGCCA 1 cut(s) 562
MspI CCGG 5 cut(s) 240, 271, 383, 722, 734
MspR9I CCNGG 2 cut(s) 240, 241
MwoI GCNNNNNNNGC 2 cut(s) 441, 568
NciI CCSGG 2 cut(s) 240, 241
NdeII GATC 1 cut(s) 450
NlaIII CATG 4 cut(s) 106, 413, 424, 567
NlaIV GGNNCC 3 cut(s) 269, 452, 669
PagI TCATGA 1 cut(s) 102
PfeI GAWTC 1 cut(s) 59
PinAI ACCGGT 1 cut(s) 721
PkrI GCNGC 1 cut(s) 539
PleI GAGTC 4 cut(s) 117, 336, 408, 681
PpsI GAGTC 4 cut(s) 117, 336, 408, 681
PspN4I GGNNCC 3 cut(s) 269, 452, 669
PsuI RGATCY 1 cut(s) 450
RsaI GTAC 3 cut(s) 128, 516, 669
RsaNI GTAC 3 cut(s) 127, 515, 668
RseI CAYNNNNRTG 1 cut(s) 134
SatI GCNGC 1 cut(s) 538
Sau3AI GATC 1 cut(s) 450
SchI GAGTC 4 cut(s) 118, 336, 408, 681
ScrFI CCNGG 2 cut(s) 240, 241
SetI ASST 6 cut(s) 173, 209, 507, 591, 652, 746
SfaNI GCATC 7 cut(s) 48, 153, 369, 524, 532, 722, 737
SmaI CCCGGG 1 cut(s) 241
SmiMI CAYNNNNRTG 1 cut(s) 134
Sse9I AATT 2 cut(s) 737, 762
SsiI CCGC 2 cut(s) 285, 537
SspI AATATT 1 cut(s) 153
StyD4I CCNGG 2 cut(s) 238, 239
StyI CCWWGG 1 cut(s) 118
TaqI TCGA 1 cut(s) 112
TaqII GACCGA 1 cut(s) 478
TasI AATT 2 cut(s) 737, 762
TatI WGTACW 2 cut(s) 126, 514
TauI GCSGC 1 cut(s) 540
TfiI GAWTC 1 cut(s) 59
TscAI CASTG 2 cut(s) 369, 789
TspDTI ATGAA 4 cut(s) 91, 437, 488, 764
TspMI CCCGGG 1 cut(s) 239
TspRI CASTG 2 cut(s) 369, 789
XapI RAATTY 1 cut(s) 762
XmaI CCCGGG 1 cut(s) 239
XmiI GTMKAC 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.