Rmu_sc0032205.1_g000001
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032205.1
Physical Location & Seq
Forward (+)
1 .. 2912
2912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032205.1_g000001.1.cds

Sequence Viewer

Length: 935 bp
tgagagcgctggatgcaatctttcagaaatggaatgtaacagccaatacgaagcaatggaacacaactggtgacccatgcagtgggcttgcggtagatgaagctgatgacaccggttatttctttaacggagataatgattacaatcccttcgtcaaatgcaactgttcttctgttacaaactcaacttgccatattacccaactgaaagcatctactttggacattgttgctccaattccagaagagctctatgctttgactttccttcaatatctgaatgtggaaaaaaattacttgacaggacccatctctgcatcgattggaaatctaaccagcatcacatacttgaactttggacacaacgacttatcaggcgaactaccaaaggaaattgcaaaactcaccaatttgacattcttggctgttgggacactcaacctttctggttctctgccacctgagattgggtatttaacaacaataaaaaagattttcattgataattctggacttagcggtgagattcctccaacatttgctaatctaacaaacttggaaacattttgggcaacagatacaaacctcactggcaggataccggacttcgtaggagattggacaaagcttactaccttgaggtttcagggaaactcctttgaaggttccataccatcttcactgtccagattgactcttttgacagagctgcgaattactgatttaacgattgccaatgaaaactcttctcttggatttatcaagaatatgacgtctctagaagtcttaatgctgaggaataacaatatttctgattcaattccttccaacattggagattaccaaaaattggttcacctggatttgagcttcaacaatttgaatggacaaataccagtctcactatttgatatgaatgtgctcgccatcctgtaa

Protein Analysis

310

Amino Acids

34.02

Weight (kDa)

4.55

Isoelectric Point (pI)

22.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 775
AccB7I CCANNNNNTGG 2 cut(s) 82, 849
AciI CCGC 2 cut(s) 91, 518
AcyI GRCGYC 1 cut(s) 772
AfeI AGCGCT 1 cut(s) 8
AfiI CCNNNNNNNGG 3 cut(s) 82, 466, 849
AgeI ACCGGT 1 cut(s) 112
AgsI TTSAA 6 cut(s) 271, 351, 661, 818, 873, 882
AjnI CCWGG 1 cut(s) 857
AjuI GAANNNNNNNTTGG 4 cut(s) 400, 432, 836, 868
AluBI AGCT 5 cut(s) 103, 249, 627, 708, 869
AluI AGCT 5 cut(s) 103, 249, 627, 708, 869
Alw21I GWGCWC 2 cut(s) 251, 923
Alw26I GTCTC 2 cut(s) 779, 903
Aor51HI AGCGCT 1 cut(s) 8
ApeKI GCWGC 1 cut(s) 708
AsiGI ACCGGT 1 cut(s) 112
AspLEI GCGC 1 cut(s) 9
AspS9I GGNCC 1 cut(s) 304
AsuHPI GGTGA 4 cut(s) 82, 396, 532, 847
AvaII GGWCC 1 cut(s) 304
BanII GRGCYC 1 cut(s) 251
BarI GAAGNNNNNNTAC 2 cut(s) 653, 685
Bbv12I GWGCWC 2 cut(s) 251, 923
BbvCI CCTCAGC 1 cut(s) 793
BbvI GCAGC 1 cut(s) 695
BccI CCATC 3 cut(s) 316, 681, 934
BciT130I CCWGG 1 cut(s) 859
BciVI GTATCC 1 cut(s) 590
BcoDI GTCTC 2 cut(s) 779, 903
BfaI CTAG 1 cut(s) 778
BfoI RGCGCY 1 cut(s) 10
BfuI GTATCC 1 cut(s) 590
BisI GCNGC 1 cut(s) 709
BlsI GCNGC 1 cut(s) 710
Bme1390I CCNGG 1 cut(s) 859
Bme18I GGWCC 1 cut(s) 304
BmgT120I GGNCC 1 cut(s) 304
BmiI GGNNCC 2 cut(s) 306, 666
BmrFI CCNGG 1 cut(s) 859
BmsI GCATC 4 cut(s) 3, 220, 325, 347
Bpu10I CCTNAGC 1 cut(s) 793
BpuEI CTTGAG 1 cut(s) 657
Bsa29I ATCGAT 1 cut(s) 319
BsaBI GATNNNNATC 1 cut(s) 143
BsaHI GRCGYC 1 cut(s) 772
BsaWI WCCGGW 2 cut(s) 112, 600
Bsc4I CCNNNNNNNGG 3 cut(s) 82, 466, 849
Bse118I RCCGGY 1 cut(s) 112
Bse1I ACTGG 3 cut(s) 72, 594, 895
Bse3DI GCAATG 1 cut(s) 61
Bse8I GATNNNNATC 1 cut(s) 143
BseBI CCWGG 1 cut(s) 859
BseCI ATCGAT 1 cut(s) 319
BseGI GGATG 2 cut(s) 18, 926
BseJI GATNNNNATC 1 cut(s) 143
BseLI CCNNNNNNNGG 3 cut(s) 82, 466, 849
BseMI GCAATG 1 cut(s) 61
BseMII CTCAG 2 cut(s) 452, 784
BseNI ACTGG 3 cut(s) 72, 594, 895
BseXI GCAGC 1 cut(s) 695
BshTI ACCGGT 1 cut(s) 112
BshVI ATCGAT 1 cut(s) 319
BsiHKAI GWGCWC 2 cut(s) 251, 923
BsiSI CCGG 2 cut(s) 113, 601
BslFI GGGAC 1 cut(s) 444
BslI CCNNNNNNNGG 3 cut(s) 82, 466, 849
BsmAI GTCTC 2 cut(s) 779, 903
BsmBI CGTCTC 1 cut(s) 779
BsmFI GGGAC 1 cut(s) 444
Bsp1286I GDGCHC 2 cut(s) 251, 923
BspACI CCGC 2 cut(s) 91, 518
BspCNI CTCAG 2 cut(s) 453, 785
BspDI ATCGAT 1 cut(s) 319
BspLI GGNNCC 2 cut(s) 306, 666
BspQI GCTCTTC 1 cut(s) 239
BsrDI GCAATG 1 cut(s) 61
BsrFI RCCGGY 1 cut(s) 112
BsrI ACTGG 3 cut(s) 72, 594, 895
BssAI RCCGGY 1 cut(s) 112
BssNI GRCGYC 1 cut(s) 772
Bst2UI CCWGG 1 cut(s) 859
Bst4CI ACNGT 2 cut(s) 166, 683
Bst6I CTCTTC 2 cut(s) 239, 750
BstACI GRCGYC 1 cut(s) 772
BstC8I GCNNGC 2 cut(s) 89, 923
BstDEI CTNAG 3 cut(s) 461, 514, 793
BstEII GGTNACC 1 cut(s) 70
BstF5I GGATG 2 cut(s) 18, 926
BstH2I RGCGCY 1 cut(s) 10
BstHHI GCGC 1 cut(s) 9
BstMAI GTCTC 2 cut(s) 779, 903
BstMWI GCNNNNNNNGC 1 cut(s) 13
BstNI CCWGG 1 cut(s) 859
BstPI GGTNACC 1 cut(s) 70
BstSCI CCNGG 1 cut(s) 857
BstV1I GCAGC 1 cut(s) 695
Bsu15I ATCGAT 1 cut(s) 319
BsuI GTATCC 1 cut(s) 590
BsuTUI ATCGAT 1 cut(s) 319
BtsCI GGATG 2 cut(s) 18, 926
BtsI GCAGTG 1 cut(s) 87
BtsIMutI CAGTG 3 cut(s) 87, 587, 679
Cac8I GCNNGC 2 cut(s) 89, 923
CfoI GCGC 1 cut(s) 9
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 1 cut(s) 304
ClaI ATCGAT 1 cut(s) 319
CspAI ACCGGT 1 cut(s) 112
CviAII CATG 1 cut(s) 77
CviJI RGCY 8 cut(s) 43, 87, 103, 249, 424, 627, 708, 869
CviKI_1 RGCY 8 cut(s) 43, 87, 103, 249, 424, 627, 708, 869
DdeI CTNAG 3 cut(s) 461, 514, 793
Eam1104I CTCTTC 2 cut(s) 239, 750
EarI CTCTTC 2 cut(s) 239, 750
Ecl136II GAGCTC 1 cut(s) 249
Eco24I GRGCYC 1 cut(s) 251
Eco47I GGWCC 1 cut(s) 304
Eco47III AGCGCT 1 cut(s) 8
Eco53kI GAGCTC 1 cut(s) 249
Eco91I GGTNACC 1 cut(s) 70
EcoICRI GAGCTC 1 cut(s) 249
EcoO109I RGGNCCY 1 cut(s) 304
EcoO65I GGTNACC 1 cut(s) 70
EcoRII CCWGG 1 cut(s) 857
EcoT38I GRGCYC 1 cut(s) 251
Esp3I CGTCTC 1 cut(s) 779
FaeI CATG 1 cut(s) 80
FaiI YATR 7 cut(s) 78, 194, 254, 345, 670, 769, 913
FaqI GGGAC 1 cut(s) 444
FatI CATG 1 cut(s) 76
Fnu4HI GCNGC 1 cut(s) 709
FokI GGATG 2 cut(s) 25, 913
FriOI GRGCYC 1 cut(s) 251
Fsp4HI GCNGC 1 cut(s) 709
FspBI CTAG 1 cut(s) 778
GlaI GCGC 1 cut(s) 8
GluI GCNGC 1 cut(s) 709
HaeII RGCGCY 1 cut(s) 10
HapII CCGG 2 cut(s) 113, 601
HhaI GCGC 1 cut(s) 9
Hin1I GRCGYC 1 cut(s) 772
Hin1II CATG 1 cut(s) 80
Hin6I GCGC 1 cut(s) 7
HinP1I GCGC 1 cut(s) 7
HindIII AAGCTT 1 cut(s) 625
HinfI GANTC 3 cut(s) 525, 693, 814
HpaII CCGG 2 cut(s) 113, 601
HphI GGTGA 4 cut(s) 82, 396, 532, 847
Hpy166II GTNNAC 1 cut(s) 855
Hpy188I TCNGA 3 cut(s) 26, 278, 813
Hpy188III TCNNGA 5 cut(s) 241, 509, 686, 762, 778
Hpy8I GTNNAC 1 cut(s) 855
HpyAV CCTTC 4 cut(s) 159, 277, 655, 833
HpyCH4III ACNGT 2 cut(s) 166, 683
HpyCH4IV ACGT 1 cut(s) 772
HpyCH4V TGCA 5 cut(s) 16, 80, 161, 316, 397
HpyF10VI GCNNNNNNNGC 1 cut(s) 13
HpyF3I CTNAG 3 cut(s) 461, 514, 793
HpySE526I ACGT 1 cut(s) 772
Hsp92I GRCGYC 1 cut(s) 772
Hsp92II CATG 1 cut(s) 80
HspAI GCGC 1 cut(s) 7
LguI GCTCTTC 1 cut(s) 239
LmnI GCTCC 1 cut(s) 237
Lsp1109I GCAGC 1 cut(s) 695
LweI GCATC 4 cut(s) 3, 220, 325, 347
MaeI CTAG 1 cut(s) 778
MaeII ACGT 1 cut(s) 772
MaeIII GTNAC 3 cut(s) 36, 70, 174
MboII GAAGA 4 cut(s) 161, 256, 668, 737
MhlI GDGCHC 2 cut(s) 251, 923
MluCI AATT 9 cut(s) 236, 291, 392, 408, 504, 713, 818, 847, 876
MlyI GAGTC 1 cut(s) 687
MmeI TCCRAC 2 cut(s) 556, 851
MnlI CCTC 4 cut(s) 539, 595, 632, 788
MseI TTAA 4 cut(s) 125, 475, 724, 787
MspI CCGG 2 cut(s) 113, 601
MspR9I CCNGG 1 cut(s) 859
MvaI CCWGG 1 cut(s) 859
MwoI GCNNNNNNNGC 1 cut(s) 13
NlaIII CATG 1 cut(s) 80
NlaIV GGNNCC 2 cut(s) 306, 666
NmuCI GTSAC 1 cut(s) 70
PciSI GCTCTTC 1 cut(s) 239
PfeI GAWTC 2 cut(s) 525, 814
PflMI CCANNNNNTGG 2 cut(s) 82, 849
PinAI ACCGGT 1 cut(s) 112
PkrI GCNGC 1 cut(s) 710
PleI GAGTC 1 cut(s) 687
PpsI GAGTC 1 cut(s) 687
PpuMI RGGWCCY 1 cut(s) 304
Psp124BI GAGCTC 1 cut(s) 251
Psp5II RGGWCCY 1 cut(s) 304
Psp6I CCWGG 1 cut(s) 857
PspEI GGTNACC 1 cut(s) 70
PspGI CCWGG 1 cut(s) 857
PspN4I GGNNCC 2 cut(s) 306, 666
PspPI GGNCC 1 cut(s) 304
PspPPI RGGWCCY 1 cut(s) 304
SacI GAGCTC 1 cut(s) 251
SapI GCTCTTC 1 cut(s) 239
SaqAI TTAA 4 cut(s) 125, 475, 724, 787
SatI GCNGC 1 cut(s) 709
Sau96I GGNCC 1 cut(s) 304
SchI GAGTC 1 cut(s) 687
ScrFI CCNGG 1 cut(s) 859
SduI GDGCHC 2 cut(s) 251, 923
SfaNI GCATC 4 cut(s) 3, 220, 325, 347
SinI GGWCC 1 cut(s) 304
SmlI CTYRAG 1 cut(s) 636
SmoI CTYRAG 1 cut(s) 636
Sse9I AATT 9 cut(s) 236, 291, 392, 408, 504, 713, 818, 847, 876
SsiI CCGC 2 cut(s) 91, 518
SspI AATATT 1 cut(s) 807
SspMI CTAG 1 cut(s) 778
SstI GAGCTC 1 cut(s) 251
StyD4I CCNGG 1 cut(s) 857
TaaI ACNGT 2 cut(s) 166, 683
TaiI ACGT 1 cut(s) 775
TaqI TCGA 1 cut(s) 319
TasI AATT 9 cut(s) 236, 291, 392, 408, 504, 713, 818, 847, 876
TfiI GAWTC 2 cut(s) 525, 814
Tru1I TTAA 4 cut(s) 125, 475, 724, 787
Tru9I TTAA 4 cut(s) 125, 475, 724, 787
TscAI CASTG 3 cut(s) 87, 594, 686
TseFI GTSAC 1 cut(s) 70
TseI GCWGC 1 cut(s) 708
Tsp45I GTSAC 1 cut(s) 70
TspDTI ATGAA 4 cut(s) 113, 486, 752, 928
TspGWI ACGGA 1 cut(s) 143
TspRI CASTG 3 cut(s) 87, 594, 686
Van91I CCANNNNNTGG 2 cut(s) 82, 849
VpaK11BI GGWCC 1 cut(s) 304
XbaI TCTAGA 1 cut(s) 777
XspI CTAG 1 cut(s) 778
ZraI GACGTC 1 cut(s) 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.