Prupe.4G105100_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000088
Physical Location & Seq
Forward (+)
5426476 .. 5435877
9402 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G105100.5

Sequence Viewer

Length: 3096 bp
ATGGCATGGCATCTTTCTGTGTCCTTTGCCTTCTTTTCCAGCCTATGCTTCTGGTTTCAGGTGTCCATGGCGCAAAATGCTACTACCGATCCATCTGAAGTGAGGGCATTGAACTCAATATTTGAGCAATGGAACACGCAAGCGGGGGGACTGTGGAATATTAGTGGAGAGCCATGCAGTGGATCTGCCATTAATGGAACCGAGTTTGAGGATCCAGCTAATAATCCAGCCATAATTTGTGATTGTACTTATGAAAAAAGTACTACCTGCCACATCACCCAACTGAGAGTTTATGCTCTGAACAAACGAGGGGTGTTTCCAGAAGAATTTGTGGCTTTAAGATATCTGACCTATTTGAAAATTGATCAGAATTATTTCACCGGTCCCCTACCAGCATTCATCGGCAATATGTCTGCGTTGACATTATTGTCAATTGCCCACAATTCATTCTCTGGCCCCATCCCCAAGGAGCTTGGAAACCTTAAGGAGCTAAAATTGCTGTCCATTGGATCAAATAATTTCTCCGGAACACTCCCTCCAGAACTTGGTAACTTAGTCAAGCTCGAGGAATTGTACATAAACAGTGGTGGATTCAGTGGTGAAATTCCTTCAACATTTGCTAAGCTCATCAACATGCAAATCCTTGGGGCATCAGACAGTCCTTTATCAGGAAAGATACCTGCTTTCATTGGGAATTGGACAAAACTAACTTCTTTGAGATTTCAAGGGAACTCTTTTGAAGGCCCAATACCAACCAGTTTTTCTCAATTGACCTCATTGAATTCTCTGCGAATCAGTGATATATATAATGTGAGCTCCTCTCTTGATTTTATAAGTACTTTGAAGAACTTGACTGATTTAGCTCTACGGAATGCATTAATCAATGGCAGCATCCCTACTGATATTGGAGAATATCAAGGTTTACAGATACTGGATCTGGGTTTCAACAATTTAACAGGCCAACTCCCAAGTTCTTTGTTCAACATGAGTTCTCTTACATATTTATTTCTTGGAAACAATAGTCTGTCTGGACCTCTTCCAAGCCAGAAGAGCAATCTACTACATACTATAGATTTGTCTTACAACTATTTCTCAGGAAGCTTTCCCCCATGGGTAACCACAATATCGCAACTGAACTTAGTGGTCAACAACTTCACATTTGGCAGTTCAAACATAACTCTTCCAGGATTGAATTGCCTCCAGAGGAATTTTCCATGCAATCGAAATACTCCTCGATATGCAAACTTCTCAATCAATTGTGGAGGATCACAAATGAGAGGAAGTGATGGCATATTGTATGAAGCTGACGACTCAGATCTTGGCCCAGCAACATTTAATGTAACCAGTACACAGAAATGGGCTGTTAGCAATGTGGGTTTGTTTGCTGAAAAAAAGAATCCATCATTTGTGCAAAACACCCTTACGCAAGTCACCGGTACAGATGTGACCCCAGAGCTTTTCCAGAATTCAAGGTTGTCCCCAGGTTCACTGCGATACTATGGCCTGGGTCTTGAGAATGGACCTTATACTGTAACATTGCAATTTGCAGAAACGGTTTTTGACAGCCGCGCTAAACAAACTTGGGAAAGTCTAGGAAGGCGTGTATTTGATATCTATATTCAAGGGAACCTCATAAGGAAGGACTTCGACATATCGAAGGAGGCAGGTGGGGTTAACAGAGCAGTTAAGAGACCCTTCAAGGTTAATGTGACAGAGAATTACCTAGATATTCATCTGTTCTGGGCTGGTAAGGGAACATGTTGCATACCTCAACAGGGTGATTACGGCCCGCTAATATCGACTGTCCATGCTGCTTCAGATTTTACACCAACTGTTTCTGGGCTTCCACCAACTACTCCAGGAAAGAAGAGCAGGAATGGGTTGATAGTTGGTATTGCAGTCCCTGTTGGGAGCTTGCTATTATTATTTGCAGTTCTATATATGAGGAGAAAAAAATCAGAAAAAGATGACGATGAAGTTCTTCTAGGATTAGGCCCCCGACCAAATACTTTCAGTTATGCTGAGTTGAGAGCTGCAACAGAAGATTTTAATCCTTCAAATAAGCTAGGAGAGGGAGGATATGGACCTGTTTATAAGGGTACACTATCTGATGGGAGGGTAGTGGCTGTGAAGCAACTTTCAGTAGCATCTCACCAAGGGAAGAGTCAATTTGTAACCGAGATTGCTACAATATCTGCAGTCCAACATCGCAATCTAGTGAAATTGTATGGATGCTGCATCGAAGGAACCCAGCGCATTTTGGTTTATGAGTATCTTGAAAACAAGAGCCTTGATCAGGCACTTTTTGGAAGAACTGAATTGCACCTTGACTGGCCTACCCGCTTGAATATATTGTTGGGAACAGCAAGAGGACTTGCTTACCTTCATGAGGAGTCAAGGCCCAGGATTGTGCATCGAGATGTCAAAGCCAGTAATATTTTGCTCGATGCAGAACTCTCCCCAAAAATATCAGATTTTGGATTGGCAAAGCTTTATGATGACGAAAAAACCCACATTAGCACCCGGGTTGCAGGGACAATAGGTTATTTGGCGCCGGAGTATGCAATGCGCGGACATCTGACAGAAAAGGCTGATGTATTTGGTTTCGGGGTTGTTGCTTTGGAGATCCTCAGCGGGAGGCCAAACTCAGACAACAACTTGGATCGTGAAAAGATTTATCTTCTTGAATGGGCATGGACTCTACATGAAAACGACCAGAGTTTGGGGCTGGTGGATCCGAGATTGACAGAGTTTGATGAAAATGAAGCAACTAGATTGATAAAAACAGCTCTCGTCTGCACTCAGGCATCACCAATGATGAGGCCATCGATGTCACGCGTAGTGGCAATGCTCTCTGGAGATATTGAAGCAAGCACTGTTATTTCAAAGCCAAGTTATTTGACAGATTGGGATTTCAGAGATGTAACAAGTAGCTTTTTGATGGATAATGATACCCCATCAACTGACAGCAATGTTCTTCTCAACCGTCAGACTGAAGGGAGCACAACTGGTGCTAGCCCAGAGATTGACCTTTTGCCGTCTCCGGTAAATGTCACTGAACCAATGCTCACTGGCATTATAGGAGAAGGCAGGTGA

Protein Analysis

1032

Amino Acids

113.16

Weight (kDa)

5.47

Isoelectric Point (pI)

34.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 833, 2094
AarI CACCTGC 2 cut(s) 1655, 3081
AasI GACNNNNNNGTC 1 cut(s) 427
Acc36I ACCTGC 4 cut(s) 275, 688, 1655, 3081
AccB1I GGYRCC 1 cut(s) 2551
AccB7I CCANNNNNTGG 3 cut(s) 179, 545, 2722
AccII CGCG 3 cut(s) 1569, 2571, 2838
AccIII TCCGGA 1 cut(s) 524
AciI CCGC 6 cut(s) 143, 1567, 1790, 2341, 2571, 2634
AcsI RAATTY 5 cut(s) 326, 603, 781, 1207, 1465
AcuI CTGAAG 3 cut(s) 117, 1800, 3015
AcyI GRCGYC 1 cut(s) 2552
AfaI GTAC 7 cut(s) 247, 262, 575, 838, 1348, 1438, 2101
AfiI CCNNNNNNNGG 7 cut(s) 179, 545, 668, 1775, 2296, 2389, 2722
AflII CTTAAG 1 cut(s) 482
AflIII ACRYGT 2 cut(s) 1757, 2836
AgeI ACCGGT 2 cut(s) 380, 1433
AjnI CCWGG 5 cut(s) 1183, 1480, 1503, 1858, 2402
AjuI GAANNNNNNNTTGG 4 cut(s) 745, 777, 2339, 2371
AloI GAACNNNNNNTCC 2 cut(s) 520, 552
Alw21I GWGCWC 2 cut(s) 818, 3005
Alw26I GTCTC 2 cut(s) 1684, 3045
AlwNI CAGNNNCTG 2 cut(s) 931, 1904
Ama87I CYCGRG 2 cut(s) 563, 2523
Aor13HI TCCGGA 1 cut(s) 524
ApeKI GCWGC 4 cut(s) 888, 1811, 2033, 2235
ApoI RAATTY 5 cut(s) 326, 603, 781, 1207, 1465
AseI ATTAAT 2 cut(s) 192, 878
AsiGI ACCGGT 2 cut(s) 380, 1433
Asp700I GAANNNNTTC 3 cut(s) 374, 1643, 1980
AspLEI GCGC 5 cut(s) 73, 1571, 2256, 2554, 2571
AsuC2I CCSGG 2 cut(s) 2524, 2525
AsuHPI GGTGA 7 cut(s) 268, 370, 611, 1423, 1790, 2144, 2802
AsuNHI GCTAGC 1 cut(s) 3014
AvaI CYCGRG 2 cut(s) 563, 2523
AvaII GGWCC 4 cut(s) 383, 1031, 1520, 2084
BaeI ACNNNNGTAYC 2 cut(s) 1428, 1461
BamHI GGATCC 2 cut(s) 211, 2734
BanI GGYRCC 1 cut(s) 2551
BanII GRGCYC 1 cut(s) 818
BarI GAAGNNNNNNTAC 2 cut(s) 732, 764
Bbv12I GWGCWC 2 cut(s) 818, 3005
BbvCI CCTCAGC 1 cut(s) 2630
BbvI GCAGC 4 cut(s) 900, 1798, 2020, 2222
BccI CCATC 8 cut(s) 100, 467, 1280, 1408, 2105, 2833, 2935, 2965
BceAI ACGGC 2 cut(s) 1801, 3022
BciT130I CCWGG 5 cut(s) 1185, 1482, 1505, 1860, 2404
BclI TGATCA 2 cut(s) 364, 2293
BcnI CCSGG 2 cut(s) 2524, 2525
BcoDI GTCTC 2 cut(s) 1684, 3045
BfaI CTAG 7 cut(s) 1592, 1724, 1985, 2066, 2216, 2772, 3015
BfmI CTRYAG 2 cut(s) 1068, 2196
BfoI RGCGCY 1 cut(s) 2555
BfrI CTTAAG 1 cut(s) 482
BfuAI ACCTGC 4 cut(s) 275, 688, 1655, 3081
BglII AGATCT 1 cut(s) 1315
BisI GCNGC 5 cut(s) 889, 1567, 1812, 2034, 2236
BlpI GCTNAGC 1 cut(s) 621
BlsI GCNGC 5 cut(s) 890, 1568, 1813, 2035, 2237
BmcAI AGTACT 2 cut(s) 262, 838
Bme1390I CCNGG 7 cut(s) 1185, 1482, 1505, 1860, 2404, 2524, 2525
Bme18I GGWCC 4 cut(s) 383, 1031, 1520, 2084
BmeT110I CYCGRG 2 cut(s) 563, 2523
BmiI GGNNCC 9 cut(s) 199, 213, 385, 457, 1628, 1996, 2248, 2553, 2736
BmrFI CCNGG 7 cut(s) 1185, 1482, 1505, 1860, 2404, 2524, 2525
BmsI GCATC 9 cut(s) 19, 659, 900, 2156, 2222, 2247, 2422, 2437, 2816
BmtI GCTAGC 1 cut(s) 3018
BplI GAGNNNNNCTC 2 cut(s) 805, 837
BpmI CTGGAG 4 cut(s) 522, 1184, 1842, 2877
Bpu10I CCTNAGC 1 cut(s) 2630
Bpu1102I GCTNAGC 1 cut(s) 621
BpuEI CTTGAG 1 cut(s) 1532
BpuMI CCSGG 2 cut(s) 2524, 2525
Bsa29I ATCGAT 1 cut(s) 2828
BsaBI GATNNNNATC 2 cut(s) 1731, 2049
BsaHI GRCGYC 1 cut(s) 2552
BsaI GGTCTC 1 cut(s) 1684
BsaJI CCNNGG 9 cut(s) 66, 465, 643, 1109, 1480, 1504, 2155, 2402, 2523
BsaWI WCCGGW 4 cut(s) 380, 524, 1433, 3043
BsaXI ACNNNNNCTCC 2 cut(s) 520, 550
Bsc4I CCNNNNNNNGG 7 cut(s) 179, 545, 668, 1775, 2296, 2389, 2722
Bse118I RCCGGY 2 cut(s) 380, 1433
Bse1I ACTGG 7 cut(s) 756, 936, 1344, 2336, 2430, 3013, 3076
Bse3DI GCAATG 6 cut(s) 134, 1375, 1535, 2571, 2853, 2977
Bse8I GATNNNNATC 2 cut(s) 1731, 2049
BseAI TCCGGA 1 cut(s) 524
BseBI CCWGG 5 cut(s) 1185, 1482, 1505, 1860, 2404
BseCI ATCGAT 1 cut(s) 2828
BseDI CCNNGG 9 cut(s) 66, 465, 643, 1109, 1480, 1504, 2155, 2402, 2523
BseGI GGATG 3 cut(s) 459, 891, 2237
BseJI GATNNNNATC 2 cut(s) 1731, 2049
BseLI CCNNNNNNNGG 7 cut(s) 179, 545, 668, 1775, 2296, 2389, 2722
BseMI GCAATG 6 cut(s) 134, 1375, 1535, 2571, 2853, 2977
BseMII CTCAG 7 cut(s) 275, 1107, 1326, 2013, 2644, 2661, 2816
BseNI ACTGG 7 cut(s) 756, 936, 1344, 2336, 2430, 3013, 3076
BseRI GAGGAG 4 cut(s) 808, 1221, 1960, 2405
BseXI GCAGC 4 cut(s) 900, 1798, 2020, 2222
BseYI CCCAGC 2 cut(s) 1324, 2250
BsgI GTGCAG 1 cut(s) 2782
Bsh1236I CGCG 3 cut(s) 1569, 2571, 2838
BshNI GGYRCC 1 cut(s) 2551
BshTI ACCGGT 2 cut(s) 380, 1433
BshVI ATCGAT 1 cut(s) 2828
BsiHKAI GWGCWC 2 cut(s) 818, 3005
BsiHKCI CYCGRG 2 cut(s) 563, 2523
BsiSI CCGG 6 cut(s) 381, 525, 1434, 2524, 2555, 3044
BslFI GGGAC 5 cut(s) 162, 369, 1462, 1886, 2548
BslI CCNNNNNNNGG 7 cut(s) 179, 545, 668, 1775, 2296, 2389, 2722
BsmAI GTCTC 2 cut(s) 1684, 3045
BsmBI CGTCTC 1 cut(s) 3045
BsmFI GGGAC 5 cut(s) 162, 369, 1462, 1886, 2548
BsmI GAATGC 2 cut(s) 395, 877
Bso31I GGTCTC 1 cut(s) 1684
BsoBI CYCGRG 2 cut(s) 563, 2523
Bsp1286I GDGCHC 2 cut(s) 818, 3005
Bsp13I TCCGGA 1 cut(s) 524
Bsp1407I TGTACA 1 cut(s) 573
Bsp1720I GCTNAGC 1 cut(s) 621
Bsp19I CCATGG 2 cut(s) 66, 1109
BspACI CCGC 6 cut(s) 143, 1567, 1790, 2341, 2571, 2634
BspCNI CTCAG 7 cut(s) 276, 1106, 1325, 2014, 2643, 2660, 2815
BspDI ATCGAT 1 cut(s) 2828
BspEI TCCGGA 1 cut(s) 524
BspFNI CGCG 3 cut(s) 1569, 2571, 2838
BspHI TCATGA 1 cut(s) 2386
BspLI GGNNCC 9 cut(s) 199, 213, 385, 457, 1628, 1996, 2248, 2553, 2736
BspMAI CTGCAG 1 cut(s) 2200
BspMI ACCTGC 4 cut(s) 275, 688, 1655, 3081
BspOI GCTAGC 1 cut(s) 3018
BspQI GCTCTTC 2 cut(s) 1043, 1862
BspT107I GGYRCC 1 cut(s) 2551
BspTI CTTAAG 1 cut(s) 482
BspTNI GGTCTC 1 cut(s) 1684
BsrDI GCAATG 6 cut(s) 134, 1375, 1535, 2571, 2853, 2977
BsrFI RCCGGY 2 cut(s) 380, 1433
BsrGI TGTACA 1 cut(s) 573
BsrI ACTGG 7 cut(s) 756, 936, 1344, 2336, 2430, 3013, 3076
BssAI RCCGGY 2 cut(s) 380, 1433
BssECI CCNNGG 9 cut(s) 66, 465, 643, 1109, 1480, 1504, 2155, 2402, 2523
BssNI GRCGYC 1 cut(s) 2552
BssT1I CCWWGG 5 cut(s) 66, 465, 643, 1109, 2155
Bst2UI CCWGG 5 cut(s) 1185, 1482, 1505, 1860, 2404
Bst4CI ACNGT 9 cut(s) 153, 584, 659, 1531, 1555, 1804, 1834, 2878, 2987
Bst6I CTCTTC 5 cut(s) 1041, 1043, 1185, 1862, 2156
BstACI GRCGYC 1 cut(s) 2552
BstAFI CTTAAG 1 cut(s) 482
BstAUI TGTACA 1 cut(s) 573
BstC8I GCNNGC 5 cut(s) 141, 1790, 1916, 2872, 3016
BstDSI CCRYGG 2 cut(s) 66, 1109
BstEII GGTNACC 1 cut(s) 1114
BstENI CCTNNNNNAGG 3 cut(s) 666, 2294, 2387
BstF5I GGATG 3 cut(s) 459, 891, 2237
BstFNI CGCG 3 cut(s) 1569, 2571, 2838
BstH2I RGCGCY 1 cut(s) 2555
BstHHI GCGC 5 cut(s) 73, 1571, 2256, 2554, 2571
BstMAI GTCTC 2 cut(s) 1684, 3045
BstMWI GCNNNNNNNGC 3 cut(s) 77, 496, 1050
BstNI CCWGG 5 cut(s) 1185, 1482, 1505, 1860, 2404
BstNSI RCATGY 2 cut(s) 637, 1761
BstPI GGTNACC 1 cut(s) 1114
BstSCI CCNGG 7 cut(s) 1183, 1480, 1503, 1858, 2402, 2522, 2523
BstSFI CTRYAG 2 cut(s) 1068, 2196
BstUI CGCG 3 cut(s) 1569, 2571, 2838
BstV1I GCAGC 4 cut(s) 900, 1798, 2020, 2222
BstX2I RGATCY 6 cut(s) 182, 211, 934, 1315, 2625, 2734
BstYI RGATCY 6 cut(s) 182, 211, 934, 1315, 2625, 2734
Bsu15I ATCGAT 1 cut(s) 2828
BsuTUI ATCGAT 1 cut(s) 2828
BtgI CCRYGG 2 cut(s) 66, 1109
BtgZI GCGATG 1 cut(s) 2192
BtsCI GGATG 3 cut(s) 459, 891, 2237
BtsI GCAGTG 2 cut(s) 184, 1487
BtsIMutI CAGTG 8 cut(s) 184, 589, 601, 802, 1487, 2874, 3054, 3069
BveI ACCTGC 4 cut(s) 275, 688, 1655, 3081
Cac8I GCNNGC 5 cut(s) 141, 1790, 1916, 2872, 3016
CaiI CAGNNNCTG 2 cut(s) 931, 1904
CciI TCATGA 1 cut(s) 2386
CfoI GCGC 5 cut(s) 73, 1571, 2256, 2554, 2571
Cfr10I RCCGGY 2 cut(s) 380, 1433
Cfr9I CCCGGG 1 cut(s) 2523
ClaI ATCGAT 1 cut(s) 2828
Csp6I GTAC 7 cut(s) 246, 261, 574, 837, 1347, 1437, 2100
CspAI ACCGGT 2 cut(s) 380, 1433
CviQI GTAC 7 cut(s) 246, 261, 574, 837, 1347, 1437, 2100
DinI GGCGCC 1 cut(s) 2553
DrdI GACNNNNNNGTC 1 cut(s) 427
DseDI GACNNNNNNGTC 1 cut(s) 427
Eam1104I CTCTTC 5 cut(s) 1041, 1043, 1185, 1862, 2156
EarI CTCTTC 5 cut(s) 1041, 1043, 1185, 1862, 2156
Ecl136II GAGCTC 1 cut(s) 816
Eco130I CCWWGG 5 cut(s) 66, 465, 643, 1109, 2155
Eco24I GRGCYC 1 cut(s) 818
Eco31I GGTCTC 1 cut(s) 1684
Eco32I GATATC 2 cut(s) 344, 1612
Eco47I GGWCC 4 cut(s) 383, 1031, 1520, 2084
Eco53kI GAGCTC 1 cut(s) 816
Eco57I CTGAAG 3 cut(s) 117, 1800, 3015
Eco88I CYCGRG 2 cut(s) 563, 2523
Eco91I GGTNACC 1 cut(s) 1114
EcoICRI GAGCTC 1 cut(s) 816
EcoNI CCTNNNNNAGG 3 cut(s) 666, 2294, 2387
EcoO109I RGGNCCY 1 cut(s) 1994
EcoO65I GGTNACC 1 cut(s) 1114
EcoRI GAATTC 2 cut(s) 781, 1465
EcoRII CCWGG 5 cut(s) 1183, 1480, 1503, 1858, 2402
EcoRV GATATC 2 cut(s) 344, 1612
EcoT14I CCWWGG 5 cut(s) 66, 465, 643, 1109, 2155
EcoT22I ATGCAT 1 cut(s) 877
EcoT38I GRGCYC 1 cut(s) 818
EgeI GGCGCC 1 cut(s) 2553
EheI GGCGCC 1 cut(s) 2553
ErhI CCWWGG 5 cut(s) 66, 465, 643, 1109, 2155
Esp3I CGTCTC 1 cut(s) 3045
FalI AAGNNNNNCTT 2 cut(s) 1679, 1711
FaqI GGGAC 5 cut(s) 162, 369, 1462, 1886, 2548
FauI CCCGC 4 cut(s) 136, 1797, 2348, 2627
FbaI TGATCA 2 cut(s) 364, 2293
Fnu4HI GCNGC 5 cut(s) 889, 1567, 1812, 2034, 2236
FokI GGATG 3 cut(s) 446, 878, 2244
FriOI GRGCYC 1 cut(s) 818
Fsp4HI GCNGC 5 cut(s) 889, 1567, 1812, 2034, 2236
FspBI CTAG 7 cut(s) 1592, 1724, 1985, 2066, 2216, 2772, 3015
GlaI GCGC 5 cut(s) 72, 1570, 2255, 2553, 2570
GluI GCNGC 5 cut(s) 889, 1567, 1812, 2034, 2236
GsaI CCCAGC 2 cut(s) 1328, 2254
GsuI CTGGAG 4 cut(s) 522, 1184, 1842, 2877
HaeII RGCGCY 1 cut(s) 2555
HapII CCGG 6 cut(s) 381, 525, 1434, 2524, 2555, 3044
HhaI GCGC 5 cut(s) 73, 1571, 2256, 2554, 2571
Hin1I GRCGYC 1 cut(s) 2552
Hin6I GCGC 5 cut(s) 71, 1569, 2254, 2552, 2569
HinP1I GCGC 5 cut(s) 71, 1569, 2254, 2552, 2569
HincII GTYRAC 3 cut(s) 420, 1147, 1675
HindII GTYRAC 3 cut(s) 420, 1147, 1675
HindIII AAGCTT 2 cut(s) 1099, 2489
HinfI GANTC 7 cut(s) 591, 792, 1310, 1396, 2164, 2393, 2698
HpaI GTTAAC 1 cut(s) 1675
HpaII CCGG 6 cut(s) 381, 525, 1434, 2524, 2555, 3044
HphI GGTGA 7 cut(s) 268, 370, 611, 1423, 1790, 2144, 2802
Hpy166II GTNNAC 7 cut(s) 420, 923, 1147, 1349, 1487, 1675, 2102
Hpy8I GTNNAC 7 cut(s) 420, 923, 1147, 1349, 1487, 1675, 2102
HpyCH4III ACNGT 9 cut(s) 153, 584, 659, 1531, 1555, 1804, 1834, 2878, 2987
HpyF10VI GCNNNNNNNGC 3 cut(s) 77, 496, 1050
Hsp92I GRCGYC 1 cut(s) 2552
HspAI GCGC 5 cut(s) 71, 1569, 2254, 2552, 2569
KasI GGCGCC 1 cut(s) 2551
Kpn2I TCCGGA 1 cut(s) 524
Ksp22I TGATCA 2 cut(s) 364, 2293
KspAI GTTAAC 1 cut(s) 1675
LguI GCTCTTC 2 cut(s) 1043, 1862
LmnI GCTCC 5 cut(s) 469, 487, 821, 1911, 3000
Lsp1109I GCAGC 4 cut(s) 900, 1798, 2020, 2222
LweI GCATC 9 cut(s) 19, 659, 900, 2156, 2222, 2247, 2422, 2437, 2816
MaeI CTAG 7 cut(s) 1592, 1724, 1985, 2066, 2216, 2772, 3015
MfeI CAATTG 3 cut(s) 432, 767, 1255
MflI RGATCY 6 cut(s) 182, 211, 934, 1315, 2625, 2734
MhlI GDGCHC 2 cut(s) 818, 3005
MluI ACGCGT 1 cut(s) 2836
Mly113I GGCGCC 1 cut(s) 2552
MlyI GAGTC 4 cut(s) 1304, 2173, 2402, 2692
MmeI TCCRAC 1 cut(s) 2227
Mph1103I ATGCAT 1 cut(s) 877
MroI TCCGGA 1 cut(s) 524
MroXI GAANNNNTTC 3 cut(s) 374, 1643, 1980
MslI CAYNNNNRTG 3 cut(s) 632, 1354, 2418
MspA1I CMGCKG 1 cut(s) 2634
MspCI CTTAAG 1 cut(s) 482
MspI CCGG 6 cut(s) 381, 525, 1434, 2524, 2555, 3044
MspR9I CCNGG 7 cut(s) 1185, 1482, 1505, 1860, 2404, 2524, 2525
MunI CAATTG 3 cut(s) 432, 767, 1255
Mva1269I GAATGC 2 cut(s) 395, 877
MvaI CCWGG 5 cut(s) 1185, 1482, 1505, 1860, 2404
MvnI CGCG 3 cut(s) 1569, 2571, 2838
MwoI GCNNNNNNNGC 3 cut(s) 77, 496, 1050
NarI GGCGCC 1 cut(s) 2552
NciI CCSGG 2 cut(s) 2524, 2525
NcoI CCATGG 2 cut(s) 66, 1109
NheI GCTAGC 1 cut(s) 3014
NlaIV GGNNCC 9 cut(s) 199, 213, 385, 457, 1628, 1996, 2248, 2553, 2736
NmuCI GTSAC 5 cut(s) 1429, 1444, 1708, 2832, 3052
NsiI ATGCAT 1 cut(s) 877
NspI RCATGY 2 cut(s) 637, 1761
PaeR7I CTCGAG 1 cut(s) 563
PagI TCATGA 1 cut(s) 2386
PaqCI CACCTGC 2 cut(s) 1655, 3081
PciI ACATGT 1 cut(s) 1757
PciSI GCTCTTC 2 cut(s) 1043, 1862
PctI GAATGC 2 cut(s) 395, 877
PdmI GAANNNNTTC 3 cut(s) 374, 1643, 1980
PfeI GAWTC 3 cut(s) 591, 792, 1396
PflMI CCANNNNNTGG 3 cut(s) 179, 545, 2722
PfoI TCCNGGA 2 cut(s) 1183, 1858
PinAI ACCGGT 2 cut(s) 380, 1433
PkrI GCNGC 5 cut(s) 890, 1568, 1813, 2035, 2237
PleI GAGTC 4 cut(s) 1304, 2172, 2401, 2692
PluTI GGCGCC 1 cut(s) 2555
PpsI GAGTC 4 cut(s) 1304, 2172, 2401, 2692
PscI ACATGT 1 cut(s) 1757
PshBI ATTAAT 2 cut(s) 192, 878
PsiI TTATAA 2 cut(s) 833, 2094
Psp124BI GAGCTC 1 cut(s) 818
Psp6I CCWGG 5 cut(s) 1183, 1480, 1503, 1858, 2402
PspEI GGTNACC 1 cut(s) 1114
PspFI CCCAGC 2 cut(s) 1324, 2250
PspGI CCWGG 5 cut(s) 1183, 1480, 1503, 1858, 2402
PspN4I GGNNCC 9 cut(s) 199, 213, 385, 457, 1628, 1996, 2248, 2553, 2736
PspXI VCTCGAGB 1 cut(s) 563
PstI CTGCAG 1 cut(s) 2200
PstNI CAGNNNCTG 2 cut(s) 931, 1904
PsuI RGATCY 6 cut(s) 182, 211, 934, 1315, 2625, 2734
RsaI GTAC 7 cut(s) 247, 262, 575, 838, 1348, 1438, 2101
RsaNI GTAC 7 cut(s) 246, 261, 574, 837, 1347, 1437, 2100
RseI CAYNNNNRTG 3 cut(s) 632, 1354, 2418
SacI GAGCTC 1 cut(s) 818
SapI GCTCTTC 2 cut(s) 1043, 1862
SatI GCNGC 5 cut(s) 889, 1567, 1812, 2034, 2236
ScaI AGTACT 2 cut(s) 262, 838
SchI GAGTC 4 cut(s) 1304, 2173, 2402, 2692
ScrFI CCNGG 7 cut(s) 1185, 1482, 1505, 1860, 2404, 2524, 2525
SduI GDGCHC 2 cut(s) 818, 3005
SfaNI GCATC 9 cut(s) 19, 659, 900, 2156, 2222, 2247, 2422, 2437, 2816
SfcI CTRYAG 2 cut(s) 1068, 2196
SfoI GGCGCC 1 cut(s) 2553
Sfr274I CTCGAG 1 cut(s) 563
SinI GGWCC 4 cut(s) 383, 1031, 1520, 2084
SlaI CTCGAG 1 cut(s) 563
SmaI CCCGGG 1 cut(s) 2525
SmiMI CAYNNNNRTG 3 cut(s) 632, 1354, 2418
SmlI CTYRAG 3 cut(s) 482, 563, 1511
SmoI CTYRAG 3 cut(s) 482, 563, 1511
SsiI CCGC 6 cut(s) 143, 1567, 1790, 2341, 2571, 2634
SspDI GGCGCC 1 cut(s) 2551
SspI AATATT 3 cut(s) 120, 160, 2437
SspMI CTAG 7 cut(s) 1592, 1724, 1985, 2066, 2216, 2772, 3015
SstI GAGCTC 1 cut(s) 818
StyD4I CCNGG 7 cut(s) 1183, 1480, 1503, 1858, 2402, 2522, 2523
StyI CCWWGG 5 cut(s) 66, 465, 643, 1109, 2155
TaaI ACNGT 9 cut(s) 153, 584, 659, 1531, 1555, 1804, 1834, 2878, 2987
TatI WGTACW 5 cut(s) 245, 260, 573, 836, 1346
TauI GCSGC 1 cut(s) 1569
TfiI GAWTC 3 cut(s) 591, 792, 1396
TscAI CASTG 8 cut(s) 184, 589, 601, 802, 1494, 2881, 3061, 3076
TseFI GTSAC 5 cut(s) 1429, 1444, 1708, 2832, 3052
TseI GCWGC 4 cut(s) 888, 1811, 2033, 2235
Tsp45I GTSAC 5 cut(s) 1429, 1444, 1708, 2832, 3052
TspGWI ACGGA 1 cut(s) 883
TspMI CCCGGG 1 cut(s) 2523
TspRI CASTG 8 cut(s) 184, 589, 601, 802, 1494, 2881, 3061, 3076
Van91I CCANNNNNTGG 3 cut(s) 179, 545, 2722
Vha464I CTTAAG 1 cut(s) 482
VpaK11BI GGWCC 4 cut(s) 383, 1031, 1520, 2084
VspI ATTAAT 2 cut(s) 192, 878
XagI CCTNNNNNAGG 3 cut(s) 666, 2294, 2387
XapI RAATTY 5 cut(s) 326, 603, 781, 1207, 1465
XceI RCATGY 2 cut(s) 637, 1761
XhoI CTCGAG 1 cut(s) 563
XmaI CCCGGG 1 cut(s) 2523
XmnI GAANNNNTTC 3 cut(s) 374, 1643, 1980
XspI CTAG 7 cut(s) 1592, 1724, 1985, 2066, 2216, 2772, 3015
ZrmI AGTACT 2 cut(s) 262, 838
Zsp2I ATGCAT 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.