RchiOBHm_Chr5g0018861

Di-glucose binding within endoplasmic reticulum

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000088
Physical Location & Seq
Forward (+)
13356836 .. 13360507
3672 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29902

Sequence Viewer

Length: 1176 bp
ATGAAGCAATCTTCTCTTTCATTACTATGCTTCTGCCTAGGCTATCTGGGTTGTTTCTGGTTTCACATTTCCATGGCTCAAAATGCAACTAATGCTACTACGGACCCATCTGAAGTGTCCGCTTTGAACTCGATCTTCCAACAGTGGGGAGCACAGTCAGTGGCGCTGTGGAATATCAGTGGAGAGCCATGCAGTGGATCAGCCATCAATAGAACTAATACTTACCCTGACATTAAATGTGATTGTACCTTTGACAATGGTACCACCTGCCATATTACCCAACTGAGAGTTTATGCTCTAAACCTAACAGGACGGTTTCCAGAAGAGCTTCTGGCTTTGAAATATCTGAACGTTTTGAAAATAGATAAGAACTTTTTCACAGGTCCCTTACCCGCATGGATTGGCAATATGTCTGCATTGACGTTGTTGTCAATTGCCATCAATGCATTCTCTGGGCCGATCCCCAAGGAACTCGGAAATCTGAAGAACCTAAATATTCTGTCCTTTGGATCAAATAATTTCTCTGGAACACTCCCTCCAGAACTTGGTAATCTAATCAATCTCCAGCGACTTTACGTAGACAGCTGTGGACTTACTGGTGAAATTCCTTCAACATTTGCTAAACTTCGTAACATGGAAGTCCTTTGGGCATCTGACACTCCTTTCTCCGGAAAGATACCTGATTTCATTGGGAATTGGACGAAGCTAAACGAACTGAGACTTCAAGGGAACTCTTTTGAAGGCCCAATACCAACCAATTTTTCCCAGTTGACCTCATTGAATTCTCTGCGAATCAGTGATATATACAATGGGAGCTCCTCTCTTGGTTTCATAAAAAATTTGAAGAACTTGACTGATTTAGTTCTACGAAATGCATTGATTACTGGTAGCCTACCTTCTGATATTGCAGAATATCCAAGTTTATGGATACTGGATTTGGGTTTCAACAATTTGACAGGCCAACTCCCATATGGCTTGTTCACCATGAGTGCTTCTCTTACACACTTAGACTTGTCTTACAACTATTTATCAGGGAGTCTTCCTCCATGGGTAACCTCAACAGCGCAACTGAACCTAGTGGTGAACAACTTCATCTTTGACAGTTCAAACACAACGTACGTTGAGGTTACTCTTACTCTTCTATTGACAACTACTACTAGTATCAATGAGAAGTAA

Protein Analysis

391

Amino Acids

42.88

Weight (kDa)

5.12

Isoelectric Point (pI)

33.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 177 - 265 3.5e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 275
AasI GACNNNNNNGTC 1 cut(s) 427
Acc36I ACCTGC 1 cut(s) 275
Acc65I GGTACC 1 cut(s) 260
AccB1I GGYRCC 1 cut(s) 260
AccB7I CCANNNNNTGG 2 cut(s) 194, 545
AccI GTMKAC 1 cut(s) 579
AccIII TCCGGA 1 cut(s) 668
AciI CCGC 2 cut(s) 120, 393
AclI AACGTT 1 cut(s) 351
AclWI GGATC 3 cut(s) 205, 454, 517
AcsI RAATTY 3 cut(s) 603, 781, 838
AcuI CTGAAG 2 cut(s) 132, 503
AfaI GTAC 3 cut(s) 247, 262, 1118
AfiI CCNNNNNNNGG 4 cut(s) 145, 194, 545, 668
AhlI ACTAGT 1 cut(s) 1157
AjuI GAANNNNNNNTTGG 2 cut(s) 745, 777
AloI GAACNNNNNNTCC 2 cut(s) 520, 552
AluBI AGCT 4 cut(s) 328, 585, 706, 816
AluI AGCT 4 cut(s) 328, 585, 706, 816
Alw21I GWGCWC 2 cut(s) 154, 818
Alw26I GTCTC 1 cut(s) 712
AlwI GGATC 3 cut(s) 205, 454, 517
Aor13HI TCCGGA 1 cut(s) 668
AoxI GGCC 3 cut(s) 455, 742, 958
ApoI RAATTY 3 cut(s) 603, 781, 838
Asp700I GAANNNNTTC 3 cut(s) 327, 374, 1088
Asp718I GGTACC 1 cut(s) 260
AspA2I CCTAGG 1 cut(s) 37
AspLEI GCGC 2 cut(s) 166, 1066
AspS9I GGNCC 4 cut(s) 103, 383, 455, 743
AsuHPI GGTGA 3 cut(s) 611, 973, 1093
AvaII GGWCC 2 cut(s) 103, 383
AvrII CCTAGG 1 cut(s) 37
BaeI ACNNNNGTAYC 2 cut(s) 244, 277
BanI GGYRCC 1 cut(s) 260
BanII GRGCYC 1 cut(s) 818
BarI GAAGNNNNNNTAC 4 cut(s) 732, 764, 880, 912
BbsI GAAGAC 1 cut(s) 1031
Bbv12I GWGCWC 2 cut(s) 154, 818
BccI CCATC 3 cut(s) 115, 212, 446
BciVI GTATCC 1 cut(s) 921
BcoDI GTCTC 1 cut(s) 712
BcuI ACTAGT 1 cut(s) 1157
BfaI CTAG 3 cut(s) 38, 1076, 1158
BfoI RGCGCY 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 275
BfuI GTATCC 1 cut(s) 921
BlnI CCTAGG 1 cut(s) 37
Bme18I GGWCC 2 cut(s) 103, 383
BmgT120I GGNCC 4 cut(s) 103, 383, 455, 743
BmiI GGNNCC 3 cut(s) 105, 262, 385
BmrI ACTGGG 1 cut(s) 760
BmsI GCATC 1 cut(s) 659
BmuI ACTGGG 1 cut(s) 760
BpiI GAAGAC 1 cut(s) 1031
BplI GAGNNNNNCTC 6 cut(s) 805, 837, 979, 1011, 1027, 1059
BpmI CTGGAG 2 cut(s) 522, 548
BsaAI YACGTR 1 cut(s) 577
BsaJI CCNNGG 4 cut(s) 37, 72, 465, 1046
BsaWI WCCGGW 1 cut(s) 668
BsaXI ACNNNNNCTCC 2 cut(s) 520, 550
Bsc4I CCNNNNNNNGG 4 cut(s) 145, 194, 545, 668
Bse1I ACTGG 4 cut(s) 601, 766, 889, 936
BseAI TCCGGA 1 cut(s) 668
BseDI CCNNGG 4 cut(s) 37, 72, 465, 1046
BseLI CCNNNNNNNGG 4 cut(s) 145, 194, 545, 668
BseMII CTCAG 2 cut(s) 275, 707
BseNI ACTGG 4 cut(s) 601, 766, 889, 936
BseRI GAGGAG 1 cut(s) 808
BshFI GGCC 3 cut(s) 457, 744, 960
BshNI GGYRCC 1 cut(s) 260
BsiHKAI GWGCWC 2 cut(s) 154, 818
BsiSI CCGG 1 cut(s) 669
BsiWI CGTACG 1 cut(s) 1116
BslFI GGGAC 1 cut(s) 369
BslI CCNNNNNNNGG 4 cut(s) 145, 194, 545, 668
BsmAI GTCTC 1 cut(s) 712
BsmFI GGGAC 1 cut(s) 369
BsmI GAATGC 1 cut(s) 446
BsnI GGCC 3 cut(s) 457, 744, 960
Bsp1286I GDGCHC 2 cut(s) 154, 818
Bsp13I TCCGGA 1 cut(s) 668
Bsp143I GATC 4 cut(s) 132, 197, 459, 509
Bsp19I CCATGG 2 cut(s) 72, 1046
BspACI CCGC 2 cut(s) 120, 393
BspANI GGCC 3 cut(s) 457, 744, 960
BspCNI CTCAG 2 cut(s) 276, 708
BspEI TCCGGA 1 cut(s) 668
BspLI GGNNCC 3 cut(s) 105, 262, 385
BspMI ACCTGC 1 cut(s) 275
BspPI GGATC 3 cut(s) 205, 454, 517
BspQI GCTCTTC 1 cut(s) 318
BspT107I GGYRCC 1 cut(s) 260
BsrI ACTGG 4 cut(s) 601, 766, 889, 936
BssECI CCNNGG 4 cut(s) 37, 72, 465, 1046
BssMI GATC 4 cut(s) 132, 197, 459, 509
BssT1I CCWWGG 4 cut(s) 37, 72, 465, 1046
Bst4CI ACNGT 4 cut(s) 144, 156, 315, 1103
Bst6I CTCTTC 2 cut(s) 318, 1143
BstAPI GCANNNNNTGC 1 cut(s) 92
BstBAI YACGTR 1 cut(s) 577
BstDEI CTNAG 3 cut(s) 284, 716, 1006
BstDSI CCRYGG 2 cut(s) 72, 1046
BstEII GGTNACC 1 cut(s) 1051
BstH2I RGCGCY 1 cut(s) 167
BstHHI GCGC 2 cut(s) 166, 1066
BstKTI GATC 4 cut(s) 135, 200, 462, 512
BstMAI GTCTC 1 cut(s) 712
BstMBI GATC 4 cut(s) 132, 197, 459, 509
BstMWI GCNNNNNNNGC 3 cut(s) 83, 92, 443
BstPI GGTNACC 1 cut(s) 1051
BstSNI TACGTA 1 cut(s) 577
BstV2I GAAGAC 1 cut(s) 1031
BstXI CCANNNNNNTGG 1 cut(s) 924
BsuI GTATCC 1 cut(s) 921
BsuRI GGCC 3 cut(s) 457, 744, 960
BtgI CCRYGG 2 cut(s) 72, 1046
BtsI GCAGTG 1 cut(s) 199
BtsIMutI CAGTG 5 cut(s) 149, 165, 184, 199, 802
BveI ACCTGC 1 cut(s) 275
CfoI GCGC 2 cut(s) 166, 1066
Cfr13I GGNCC 4 cut(s) 103, 383, 455, 743
Csp6I GTAC 3 cut(s) 246, 261, 1117
CviAII CATG 6 cut(s) 73, 189, 396, 634, 985, 1047
CviQI GTAC 3 cut(s) 246, 261, 1117
DdeI CTNAG 3 cut(s) 284, 716, 1006
DpnI GATC 4 cut(s) 134, 199, 461, 511
DpnII GATC 4 cut(s) 132, 197, 459, 509
DrdI GACNNNNNNGTC 1 cut(s) 427
DseDI GACNNNNNNGTC 1 cut(s) 427
Eam1104I CTCTTC 2 cut(s) 318, 1143
EarI CTCTTC 2 cut(s) 318, 1143
Ecl136II GAGCTC 1 cut(s) 816
Eco105I TACGTA 1 cut(s) 577
Eco130I CCWWGG 4 cut(s) 37, 72, 465, 1046
Eco24I GRGCYC 1 cut(s) 818
Eco47I GGWCC 2 cut(s) 103, 383
Eco53kI GAGCTC 1 cut(s) 816
Eco57I CTGAAG 2 cut(s) 132, 503
Eco91I GGTNACC 1 cut(s) 1051
EcoICRI GAGCTC 1 cut(s) 816
EcoO109I RGGNCCY 1 cut(s) 383
EcoO65I GGTNACC 1 cut(s) 1051
EcoRI GAATTC 1 cut(s) 781
EcoT14I CCWWGG 4 cut(s) 37, 72, 465, 1046
EcoT22I ATGCAT 2 cut(s) 448, 877
EcoT38I GRGCYC 1 cut(s) 818
ErhI CCWWGG 4 cut(s) 37, 72, 465, 1046
FaeI CATG 6 cut(s) 76, 192, 399, 637, 988, 1050
FaqI GGGAC 1 cut(s) 369
FatI CATG 6 cut(s) 72, 188, 395, 633, 984, 1046
FauI CCCGC 1 cut(s) 400
FauNDI CATATG 1 cut(s) 970
FblI GTMKAC 1 cut(s) 579
FriOI GRGCYC 1 cut(s) 818
FspBI CTAG 3 cut(s) 38, 1076, 1158
GlaI GCGC 2 cut(s) 165, 1065
GsuI CTGGAG 2 cut(s) 522, 548
HaeII RGCGCY 1 cut(s) 167
HaeIII GGCC 3 cut(s) 457, 744, 960
HapII CCGG 1 cut(s) 669
HhaI GCGC 2 cut(s) 166, 1066
Hin1II CATG 6 cut(s) 76, 192, 399, 637, 988, 1050
Hin6I GCGC 2 cut(s) 164, 1064
HinP1I GCGC 2 cut(s) 164, 1064
HincII GTYRAC 1 cut(s) 771
HindII GTYRAC 1 cut(s) 771
HinfI GANTC 2 cut(s) 792, 1036
HpaII CCGG 1 cut(s) 669
HphI GGTGA 3 cut(s) 611, 973, 1093
Hpy166II GTNNAC 5 cut(s) 580, 590, 771, 981, 1084
Hpy188I TCNGA 6 cut(s) 112, 348, 476, 483, 655, 901
Hpy188III TCNNGA 4 cut(s) 320, 525, 539, 669
Hpy8I GTNNAC 5 cut(s) 580, 590, 771, 981, 1084
HpyAV CCTTC 3 cut(s) 618, 734, 906
HpyCH4III ACNGT 4 cut(s) 144, 156, 315, 1103
HpyCH4IV ACGT 5 cut(s) 351, 422, 576, 1115, 1119
HpyCH4V TGCA 6 cut(s) 86, 192, 416, 446, 875, 908
HpyF10VI GCNNNNNNNGC 3 cut(s) 83, 92, 443
HpyF3I CTNAG 3 cut(s) 284, 716, 1006
HpySE526I ACGT 5 cut(s) 351, 422, 576, 1115, 1119
Hsp92II CATG 6 cut(s) 76, 192, 399, 637, 988, 1050
HspAI GCGC 2 cut(s) 164, 1064
Kpn2I TCCGGA 1 cut(s) 668
KpnI GGTACC 1 cut(s) 264
Kzo9I GATC 4 cut(s) 132, 197, 459, 509
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 3 cut(s) 149, 813, 821
LweI GCATC 1 cut(s) 659
MaeI CTAG 3 cut(s) 38, 1076, 1158
MaeII ACGT 5 cut(s) 351, 422, 576, 1115, 1119
MaeIII GTNAC 3 cut(s) 629, 1051, 1126
MalI GATC 4 cut(s) 134, 199, 461, 511
MboI GATC 4 cut(s) 132, 197, 459, 509
MboII GAAGA 7 cut(s) 3, 127, 335, 496, 856, 1031, 1130
MfeI CAATTG 1 cut(s) 432
MhlI GDGCHC 2 cut(s) 154, 818
MluCI AATT 8 cut(s) 432, 517, 603, 694, 757, 781, 838, 949
MlyI GAGTC 1 cut(s) 1045
MmeI TCCRAC 1 cut(s) 163
MnlI CCTC 6 cut(s) 546, 784, 829, 1053, 1066, 1117
Mph1103I ATGCAT 2 cut(s) 448, 877
MroI TCCGGA 1 cut(s) 668
MroXI GAANNNNTTC 3 cut(s) 327, 374, 1088
MseI TTAA 1 cut(s) 234
MslI CAYNNNNRTG 2 cut(s) 25, 71
MspA1I CMGCKG 1 cut(s) 585
MspI CCGG 1 cut(s) 669
MunI CAATTG 1 cut(s) 432
Mva1269I GAATGC 1 cut(s) 446
MwoI GCNNNNNNNGC 3 cut(s) 83, 92, 443
NcoI CCATGG 2 cut(s) 72, 1046
NdeI CATATG 1 cut(s) 970
NdeII GATC 4 cut(s) 132, 197, 459, 509
NlaIII CATG 6 cut(s) 76, 192, 399, 637, 988, 1050
NlaIV GGNNCC 3 cut(s) 105, 262, 385
NsiI ATGCAT 2 cut(s) 448, 877
PaqCI CACCTGC 1 cut(s) 275
PciSI GCTCTTC 1 cut(s) 318
PctI GAATGC 1 cut(s) 446
PdmI GAANNNNTTC 3 cut(s) 327, 374, 1088
PfeI GAWTC 1 cut(s) 792
Pfl23II CGTACG 1 cut(s) 1116
PflMI CCANNNNNTGG 2 cut(s) 194, 545
PleI GAGTC 1 cut(s) 1044
PpsI GAGTC 1 cut(s) 1044
Ppu21I YACGTR 1 cut(s) 577
PpuMI RGGWCCY 1 cut(s) 383
Psp124BI GAGCTC 1 cut(s) 818
Psp1406I AACGTT 1 cut(s) 351
Psp5II RGGWCCY 1 cut(s) 383
PspEI GGTNACC 1 cut(s) 1051
PspLI CGTACG 1 cut(s) 1116
PspN4I GGNNCC 3 cut(s) 105, 262, 385
PspPI GGNCC 4 cut(s) 103, 383, 455, 743
PspPPI RGGWCCY 1 cut(s) 383
PvuII CAGCTG 1 cut(s) 585
RsaI GTAC 3 cut(s) 247, 262, 1118
RsaNI GTAC 3 cut(s) 246, 261, 1117
RseI CAYNNNNRTG 2 cut(s) 25, 71
SacI GAGCTC 1 cut(s) 818
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 1 cut(s) 234
Sau3AI GATC 4 cut(s) 132, 197, 459, 509
Sau96I GGNCC 4 cut(s) 103, 383, 455, 743
SchI GAGTC 1 cut(s) 1045
SduI GDGCHC 2 cut(s) 154, 818
SfaNI GCATC 1 cut(s) 659
SinI GGWCC 2 cut(s) 103, 383
SmiMI CAYNNNNRTG 2 cut(s) 25, 71
SnaBI TACGTA 1 cut(s) 577
SpeI ACTAGT 1 cut(s) 1157
Sse9I AATT 8 cut(s) 432, 517, 603, 694, 757, 781, 838, 949
SsiI CCGC 2 cut(s) 120, 393
SspI AATATT 1 cut(s) 496
SspMI CTAG 3 cut(s) 38, 1076, 1158
SstI GAGCTC 1 cut(s) 818
StyI CCWWGG 4 cut(s) 37, 72, 465, 1046
TaaI ACNGT 4 cut(s) 144, 156, 315, 1103
TaiI ACGT 5 cut(s) 354, 425, 579, 1118, 1122
TaqI TCGA 1 cut(s) 131
TasI AATT 8 cut(s) 432, 517, 603, 694, 757, 781, 838, 949
TfiI GAWTC 1 cut(s) 792
Tru1I TTAA 1 cut(s) 234
Tru9I TTAA 1 cut(s) 234
TscAI CASTG 5 cut(s) 149, 165, 184, 199, 802
TspDTI ATGAA 5 cut(s) 9, 17, 676, 820, 1081
TspGWI ACGGA 1 cut(s) 116
TspRI CASTG 5 cut(s) 149, 165, 184, 199, 802
Van91I CCANNNNNTGG 2 cut(s) 194, 545
VpaK11BI GGWCC 2 cut(s) 103, 383
XapI RAATTY 3 cut(s) 603, 781, 838
XcmI CCANNNNNNNNNTGG 1 cut(s) 968
XmaJI CCTAGG 1 cut(s) 37
XmiI GTMKAC 1 cut(s) 579
XmnI GAANNNNTTC 3 cut(s) 327, 374, 1088
XspI CTAG 3 cut(s) 38, 1076, 1158
Zsp2I ATGCAT 2 cut(s) 448, 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.