Rw2G019440
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
25714276 .. 25715011
736 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G019440.1

Sequence Viewer

Length: 531 bp
ATGTGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTGTGGCTCTTGAAATTGTCAGTGGTAGGCCAAATTCTGATCCGAGTTTGGGTGAAGAAATGACATATCTTCTCGAATGGGCTTGGCAATTGCATGAAAACAAACGGGCAGTTGAACTAGTGGACTCTAGATTATCTGAATTCAATGACGAAGAAGCACAACTAATAATCAAAATAGGGCTTTTGTGCACTCAAACATCACCAATGCTACGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACAGAACTGGACGGTGTAAGTATTGTCACCAACGTGACTGATATGACGACTAGAGGAACTGATTTTAGCTTCAACAACTCATCAGCAAGTACAAGCATAATGGGGCAATCACCTCCTAATGCCATTCATTCTATGTCTAAAAATAAGGAATCGAGTGGTACGTCCCTAAAGATCGATTGTTATCATTTTGTTTGA

Protein Analysis

176

Amino Acids

19.27

Weight (kDa)

4.82

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 80
AcsI RAATTY 2 cut(s) 79, 185
AfaI GTAC 2 cut(s) 427, 496
AfiI CCNNNNNNNGG 2 cut(s) 95, 277
AgsI TTSAA 5 cut(s) 59, 161, 190, 321, 409
AhlI ACTAGT 1 cut(s) 163
AleI CACNNNNGTG 1 cut(s) 368
AluBI AGCT 1 cut(s) 405
AluI AGCT 1 cut(s) 405
Alw21I GWGCWC 1 cut(s) 236
Alw44I GTGCAC 1 cut(s) 232
AlwI GGATC 1 cut(s) 80
AoxI GGCC 1 cut(s) 74
ApaLI GTGCAC 1 cut(s) 232
ApoI RAATTY 2 cut(s) 79, 185
Asp700I GAANNNNTTC 1 cut(s) 286
AsuC2I CCSGG 1 cut(s) 327
AsuHPI GGTGA 4 cut(s) 110, 237, 355, 438
BaeGI GKGCMC 1 cut(s) 236
BbsI GAAGAC 1 cut(s) 29
Bbv12I GWGCWC 1 cut(s) 236
BccI CCATC 1 cut(s) 268
BcnI CCSGG 1 cut(s) 327
BcuI ACTAGT 1 cut(s) 163
BfaI CTAG 3 cut(s) 164, 174, 387
Bme1390I CCNGG 1 cut(s) 327
BmrFI CCNGG 1 cut(s) 327
BoxI GACNNNNGTC 1 cut(s) 29
BpiI GAAGAC 1 cut(s) 29
BpuMI CCSGG 1 cut(s) 327
Bsa29I ATCGAT 1 cut(s) 510
BsaBI GATNNNNATC 1 cut(s) 516
Bsc4I CCNNNNNNNGG 2 cut(s) 95, 277
Bse1I ACTGG 1 cut(s) 348
Bse8I GATNNNNATC 1 cut(s) 516
BseCI ATCGAT 1 cut(s) 510
BseGI GGATG 1 cut(s) 260
BseJI GATNNNNATC 1 cut(s) 516
BseLI CCNNNNNNNGG 2 cut(s) 95, 277
BseNI ACTGG 1 cut(s) 348
BseSI GKGCMC 1 cut(s) 236
BshFI GGCC 1 cut(s) 76
BshVI ATCGAT 1 cut(s) 510
BsiHKAI GWGCWC 1 cut(s) 236
BsiSI CCGG 1 cut(s) 327
BslFI GGGAC 2 cut(s) 253, 484
BslI CCNNNNNNNGG 2 cut(s) 95, 277
BsmFI GGGAC 2 cut(s) 253, 484
BsmI GAATGC 1 cut(s) 288
BsnI GGCC 1 cut(s) 76
Bsp1286I GDGCHC 1 cut(s) 236
Bsp143I GATC 2 cut(s) 85, 507
BspANI GGCC 1 cut(s) 76
BspDI ATCGAT 1 cut(s) 510
BspPI GGATC 1 cut(s) 80
BsrI ACTGG 1 cut(s) 348
BssMI GATC 2 cut(s) 85, 507
Bst4CI ACNGT 2 cut(s) 313, 350
BstF5I GGATG 1 cut(s) 260
BstKTI GATC 2 cut(s) 88, 510
BstMBI GATC 2 cut(s) 85, 507
BstPAI GACNNNNGTC 1 cut(s) 29
BstSCI CCNGG 1 cut(s) 325
BstSLI GKGCMC 1 cut(s) 236
BstV2I GAAGAC 1 cut(s) 29
Bsu15I ATCGAT 1 cut(s) 510
BsuRI GGCC 1 cut(s) 76
BsuTUI ATCGAT 1 cut(s) 510
BtsCI GGATG 1 cut(s) 260
BtsIMutI CAGTG 1 cut(s) 73
ClaI ATCGAT 1 cut(s) 510
Csp6I GTAC 2 cut(s) 426, 495
CviAII CATG 2 cut(s) 140, 265
CviJI RGCY 6 cut(s) 53, 76, 128, 226, 325, 405
CviKI_1 RGCY 6 cut(s) 53, 76, 128, 226, 325, 405
CviQI GTAC 2 cut(s) 426, 495
DpnI GATC 2 cut(s) 87, 509
DpnII GATC 2 cut(s) 85, 507
EcoRI GAATTC 1 cut(s) 185
FaeI CATG 2 cut(s) 143, 268
FaiI YATR 7 cut(s) 112, 141, 266, 299, 380, 434, 470
FaqI GGGAC 2 cut(s) 253, 484
FatI CATG 2 cut(s) 139, 264
FokI GGATG 1 cut(s) 247
FspBI CTAG 3 cut(s) 164, 174, 387
HaeIII GGCC 1 cut(s) 76
HapII CCGG 1 cut(s) 327
Hin1II CATG 2 cut(s) 143, 268
HinfI GANTC 2 cut(s) 170, 485
HpaII CCGG 1 cut(s) 327
HphI GGTGA 4 cut(s) 110, 237, 355, 438
Hpy166II GTNNAC 3 cut(s) 8, 169, 234
Hpy188I TCNGA 3 cut(s) 85, 90, 184
Hpy188III TCNNGA 4 cut(s) 56, 119, 174, 291
Hpy8I GTNNAC 3 cut(s) 8, 169, 234
HpyCH4III ACNGT 2 cut(s) 313, 350
HpyCH4IV ACGT 2 cut(s) 369, 497
HpyCH4V TGCA 2 cut(s) 139, 234
HpySE526I ACGT 2 cut(s) 369, 497
Hsp92II CATG 2 cut(s) 143, 268
Kzo9I GATC 2 cut(s) 85, 507
LpnPI CCDG 3 cut(s) 276, 329, 340
MaeI CTAG 3 cut(s) 164, 174, 387
MaeII ACGT 2 cut(s) 369, 497
MaeIII GTNAC 5 cut(s) 304, 313, 329, 361, 370
MalI GATC 2 cut(s) 87, 509
MboI GATC 2 cut(s) 85, 507
MboII GAAGA 4 cut(s) 34, 107, 113, 209
MfeI CAATTG 1 cut(s) 134
MhlI GDGCHC 1 cut(s) 236
MluCI AATT 4 cut(s) 60, 79, 134, 185
MlyI GAGTC 1 cut(s) 164
MnlI CCTC 2 cut(s) 383, 459
MroXI GAANNNNTTC 1 cut(s) 286
MslI CAYNNNNRTG 1 cut(s) 368
MspI CCGG 1 cut(s) 327
MspR9I CCNGG 1 cut(s) 327
MunI CAATTG 1 cut(s) 134
Mva1269I GAATGC 1 cut(s) 288
NciI CCSGG 1 cut(s) 327
NdeII GATC 2 cut(s) 85, 507
NlaIII CATG 2 cut(s) 143, 268
NmuCI GTSAC 3 cut(s) 304, 361, 370
OliI CACNNNNGTG 1 cut(s) 368
PcsI WCGNNNNNNNCGW 1 cut(s) 494
PctI GAATGC 1 cut(s) 288
PdmI GAANNNNTTC 1 cut(s) 286
PfeI GAWTC 1 cut(s) 485
PleI GAGTC 1 cut(s) 164
PpsI GAGTC 1 cut(s) 164
PshAI GACNNNNGTC 1 cut(s) 29
RsaI GTAC 2 cut(s) 427, 496
RsaNI GTAC 2 cut(s) 426, 495
RseI CAYNNNNRTG 1 cut(s) 368
Sau3AI GATC 2 cut(s) 85, 507
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 1 cut(s) 327
SduI GDGCHC 1 cut(s) 236
SetI ASST 5 cut(s) 15, 372, 407, 451, 500
SmiMI CAYNNNNRTG 1 cut(s) 368
SpeI ACTAGT 1 cut(s) 163
Sse9I AATT 4 cut(s) 60, 79, 134, 185
SspMI CTAG 3 cut(s) 164, 174, 387
StyD4I CCNGG 1 cut(s) 325
TaaI ACNGT 2 cut(s) 313, 350
TaiI ACGT 2 cut(s) 372, 500
TaqI TCGA 3 cut(s) 120, 488, 510
TasI AATT 4 cut(s) 60, 79, 134, 185
TatI WGTACW 1 cut(s) 425
TfiI GAWTC 1 cut(s) 485
TscAI CASTG 1 cut(s) 73
TseFI GTSAC 3 cut(s) 304, 361, 370
Tsp45I GTSAC 3 cut(s) 304, 361, 370
TspDTI ATGAA 2 cut(s) 156, 452
TspRI CASTG 1 cut(s) 73
VneI GTGCAC 1 cut(s) 232
XapI RAATTY 2 cut(s) 79, 185
XbaI TCTAGA 1 cut(s) 173
XmnI GAANNNNTTC 1 cut(s) 286
XspI CTAG 3 cut(s) 164, 174, 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.