Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000088

Physical Location & Seq

Genomic Coordinates Reverse (-)

21001269 .. 21007855

Gene Structure 6587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G56140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3102 bp

ATGCTCAGGCTATGGCGGTATCTGTGTCTACTCCTCACTGTCTGGTTCTTGTGTAATTTCGGTCCGGTTTACGTGGTTCGAGCTCAAAATCGAACAGGAGCCACCACACATCCCGACGAAGCGCTAGCTTTGAACTCAATTTTCGCGGCTTGGAGGATTCGGGCGCCGAGGGAATGGAACATCAGCGGCGAACTTTGCTCCGGCGCCGCTATCGACGCCAGTGTTCTCGACTCAAACCCTGCCTACAATCCTCTCATCAAATGCGACTGCAGTTTCGAAAACTCCACAATCTGCCGCATTACCAACATCAAGGTTTATGCGATGGAAGTTGTAGGATCTATACCTCAACAACTCTGGACCTTGGAATACCTGACAAATCTGAACTTGGGTCAAAATGTTCTCACTGGCTCACTTCCTCCTGCACTTGGAAATTTGACTCGAATGCGATGGATGACTTTTGGGATCAATGCGTTGTCTGGCCCTATTCCTAAAGAAATCGGTTTGCTTACAGATTTAAGATTACTTAGTATTAGTTCAAATAACTTTTCGGGTTCTATACCAGATGAGATTGGGAGATGTACAAAACTACAACAGATATACATAGATAGTTCGGGACTCAGCGGGGGATTACCTGTATCATTTGCTAATCTTGTGGAGCTGGAACAAGCTTGGATTGCGGATATGGAACTTACAGGTCAGATACCAGACTTTATAGGAGATTGGACCAAACTTACTACCTTGAGAATTCTTGGAACTGGTTTGAGTGGTCCGATACCGGCGTCGTTTTCAAACTTAACTTCTTTGACAGAGCTGAGGCTTGGTGATATATCCAATGGAAATTCTTCTCTTGAATTCATCAAAGACATGAAATCTCTAAGTATATTAGTATTGAGGAACAATAATCTCACTGGGACAATACCGTCTAATATTGGAGAATATTCAAGTTTGCGACAACTTGATTTGAGCTTCAACAAACTACATGGAACAATTCCGGCTTCACTTTTCAACTTAAGACAGCTTACTCACTTGTTTCTGGGGAACAACACGTTGAATGGCTCATTGCCCACTCAAAAGGGGCAGTCTCTGAGCAATGTAGATGTGTCATACAATGATTTGTCTGGAAGTCTTCCGTCATGGGTCAGTTTACCAAACTTGAATCTCAACTTAGTTGCTAACAACTTCACATTGGAAGGTCTTGACAACAGGGTTTTATCAGGACTGAACTGCCTGCAGAAGAACTTCCCATGCAATCGAGGGAAAGGAATATATTCTGACTTCTCAATCAACTGCGGAGGCCCAGAGATAAGATCTGTAACTGAAGCAGTATTTGAGAGGGAGGACGAGGATCTTGGACCAGCTTCATTTGTCGTGAGTGCTGGTCAGAGATGGGCAGCCAGTAGTGTAGGACTTTTTGCCGGAAGTAGCAACAATATATACATATCTACTTCACAATCACAATTTGTCAACACTTTGGACTCAGAGCTATTTCAGTCAGCAAGACTTTCTGCATCTTCCCTAAGGTATTATGGGTTGGGTCTAGAAAATGGAGGCTATACCGTCACACTTCAGTTTGCTGAAATACAAATTCTAGGTTCTACTTCCAACACTTGGAGAGGTTTAGGAAGACGACGTTTTGACATTTATGTCCAGGGAAGACTTGTTGAAAAGGACTTCGATGTACGCAGAACAGCTGGTGACTCCACTGTTCGAGCAGTTCAGAGAGAATATAAAGCAAATGTATCACAAAATCATCTCGAAATTCATCTTTTCTGGGCTGGAAAAGGAACATGCTGTATTCCTATCCAAGGGGCTTATGGGCCATTAATATCGGCCGTCGGTGCAACACCAGATTTCACACCAACTGTGGGTAATAGGCCACCATCAAAGGGAAAGAGCATGACTGGTACTATTGTGGGTGTCATTGTTGGCGTTGGACTTTTGAGCATCATTTCTGGTGTGGTTATCTTTATCATCCGAAAAAGAAGAAAGCGGTACACAGATGATGAAGAGATACTTAGTATGGACGTTAAGCCTTACACCTTCACTTACTCGGAACTTAAAAGTGCAACTCAAGATTTTGATCCCTCAAACAAGCTTGGAGAGGGAGGATTTGGCCCTGTTTATAAGGGAAAACTCAATGATGGAAGAGAGGTAGCAGTGAAGCTATTGTCGGTGGGATCCCGACAAGGGAAGGGACAATTTGTTGCAGAAATTGTAGCAATTTCTGCAGTCCAACATCGCAACTTAGTAAAACTTTATGGGTGCTGCTATGAAGGAGAGCATCGTTTGCTTGTATATGAATACCTTCCTAACGGAAGTCTTGATCAGGCTCTATTTGGGGAAAAGACTTTGCATCTTGATTGGTCAACCCGTTATGAGATATGCCTGGGAGTAGCCAGAGGTCTAGTCTATCTCCATGAGGAGGCAAGGCTTCGCATAGTACACAGGGATGTGAAGGCCAGCAACATTTTGCTTGACTCTAAATTAGTACCAAAAGTTTCTGATTTTGGGCTTGCAAAACTGTACGATGACAAGAAAACCCACATAAGTACCCGGGTTGCAGGGACAATTGGGTATCTTGCGCCAGAGTATGCCATGCGTGGACATCTAACAGAGAAAACGGATGTATATGCCTTTGGTGTTGTGGCTCTTGAGCTAGTGAGTGGAAGGCCAAACTCTGATGAGAACTTGGAGGATGAAAAAAGATATCTTCTTGAATGGGCATGGAATCTACACGAGAAAGGCCGTGAAGTTGAACTTATTGATCATCAGCTGACTGAATTCAACATGGAAGAAGGGAAACGCATGATTGGCATAGCCCTGCTGTGTACACAAACATCTCATGCCTTGAGACCACCAATGTCACGAGTGGTGGCCATGCTTTCAGGAGATGTTGAGGTCAGTGATGTCACTTCAAAGCCAGGCTACCTAACCGACTGGAGATTTGATGACACCACAGCCTCCTCAATCAGCGGCTTTCCATTAAGAAACACACAGGCTTCTGAATCCTTCACGAGCTTTGTGGCGCCTAGATCCGAGATATCACCGAGAAACAACGACGCTAGGCCAATGCTTGGAGCCCAGATGAATGAGGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

1033

Amino Acids

113.75

Weight (kDa)

6.37

Isoelectric Point (pI)

31.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	122 - 252	1.2e-08	Leucine-rich repeat region
LRR_14	PF23598	233 - 389	1.3e-09	Leucine-rich repeat region
LRR_8	PF13855	291 - 350	3.2e-07	Leucine rich repeat
Malectin	PF11721	426 - 612	4.4e-42	Malectin domain
Pkinase	PF00069	696 - 900	3.7e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	697 - 908	7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0000088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca	FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica	MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica	Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis	pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis	RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata	RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora	Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa	Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha	Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana	Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2124
AasI	GACNNNNNNGTC	2 cut(s)	919, 1643
AccB1I	GGYRCC	3 cut(s)	163, 203, 3025
AccB7I	CCANNNNNTGG	2 cut(s)	1608, 3074
AccI	GTMKAC	1 cut(s)	28
AccII	CGCG	1 cut(s)	146
AclWI	GGATC	7 cut(s)	343, 470, 1353, 2075, 2172, 2185, 3027
AcoI	YGGCCR	2 cut(s)	1830, 2874
AcsI	RAATTY	7 cut(s)	430, 744, 838, 851, 1584, 1758, 2780
AcuI	CTGAAG	2 cut(s)	1338, 1550
AcyI	GRCGYC	5 cut(s)	164, 204, 216, 779, 3026
AfaI	GTAC	9 cut(s)	580, 1680, 1906, 1994, 2442, 2490, 2525, 2551, 2830
AfeI	AGCGCT	1 cut(s)	123
AfiI	CCNNNNNNNGG	8 cut(s)	425, 1608, 1805, 1865, 1886, 2187, 2422, 3074
AflII	CTTAAG	1 cut(s)	1009
AflIII	ACRYGT	1 cut(s)	1044
AjnI	CCWGG	3 cut(s)	1647, 2385, 2920
Alw21I	GWGCWC	1 cut(s)	85
Alw26I	GTCTC	2 cut(s)	1086, 2845
AlwI	GGATC	7 cut(s)	343, 470, 1353, 2075, 2172, 2185, 3027
AlwNI	CAGNNNCTG	1 cut(s)	1084
Ama87I	CYCGRG	1 cut(s)	2553
Aor51HI	AGCGCT	1 cut(s)	123
ApeKI	GCWGC	2 cut(s)	1391, 2265
ApoI	RAATTY	7 cut(s)	430, 744, 838, 851, 1584, 1758, 2780
ArsI	GACNNNNNNTTYG	4 cut(s)	257, 289, 2927, 2959
AseI	ATTAAT	1 cut(s)	1823
Asp700I	GAANNNNTTC	4 cut(s)	841, 1238, 1267, 2304
AspLEI	GCGC	5 cut(s)	124, 166, 206, 2584, 3028
AspS9I	GGNCC	9 cut(s)	62, 357, 479, 723, 767, 1295, 1352, 1817, 2114
AsuC2I	CCSGG	2 cut(s)	2554, 2555
AsuHPI	GGTGA	3 cut(s)	833, 1706, 3036
AsuII	TTCGAA	1 cut(s)	276
AsuNHI	GCTAGC	1 cut(s)	124
AvaI	CYCGRG	1 cut(s)	2553
AvaII	GGWCC	5 cut(s)	62, 357, 723, 767, 1352
AxyI	CCTNAGG	1 cut(s)	1517
BaeI	ACNNNNGTAYC	6 cut(s)	764, 797, 1896, 1929, 2533, 2566
BalI	TGGCCA	1 cut(s)	2876
BamHI	GGATCC	1 cut(s)	2177
BanI	GGYRCC	3 cut(s)	163, 203, 3025
BanII	GRGCYC	2 cut(s)	85, 3082
BauI	CACGAG	3 cut(s)	2735, 2865, 3013
BbsI	GAAGAC	3 cut(s)	1118, 1630, 1660
Bbv12I	GWGCWC	1 cut(s)	85
BbvCI	CCTCAGC	1 cut(s)	812
BbvI	GCAGC	2 cut(s)	1403, 2252
BccI	CCATC	5 cut(s)	316, 441, 1380, 1888, 2135
BceAI	ACGGC	2 cut(s)	1817, 2730
BciT130I	CCWGG	3 cut(s)	1649, 2387, 2922
BclI	TGATCA	2 cut(s)	2323, 2764
BcnI	CCSGG	2 cut(s)	2554, 2555
BcoDI	GTCTC	2 cut(s)	1086, 2845
BfaI	CTAG	7 cut(s)	125, 1538, 1589, 2405, 2657, 3030, 3063
BfmI	CTRYAG	3 cut(s)	268, 1229, 2226
BfoI	RGCGCY	4 cut(s)	125, 167, 207, 3029
BfrI	CTTAAG	1 cut(s)	1009
BglII	AGATCT	1 cut(s)	1307
BisI	GCNGC	7 cut(s)	147, 187, 207, 295, 1392, 2266, 2974
BlsI	GCNGC	7 cut(s)	148, 188, 208, 296, 1393, 2267, 2975
Bme1390I	CCNGG	5 cut(s)	1649, 2387, 2554, 2555, 2922
Bme18I	GGWCC	5 cut(s)	62, 357, 723, 767, 1352
BmeT110I	CYCGRG	1 cut(s)	2553
BmgT120I	GGNCC	9 cut(s)	62, 357, 479, 723, 767, 1295, 1352, 1817, 2114
BmiI	GGNNCC	6 cut(s)	100, 165, 205, 2179, 3027, 3079
BmrFI	CCNGG	5 cut(s)	1649, 2387, 2554, 2555, 2922
BmrI	ACTGGG	1 cut(s)	918
BmsI	GCATC	4 cut(s)	1517, 1953, 2290, 2362
BmtI	GCTAGC	1 cut(s)	128
BmuI	ACTGGG	1 cut(s)	918
BpiI	GAAGAC	3 cut(s)	1118, 1630, 1660
BpmI	CTGGAG	1 cut(s)	2959
Bpu10I	CCTNAGC	2 cut(s)	5, 812
Bpu14I	TTCGAA	1 cut(s)	276
BpuEI	CTTGAG	4 cut(s)	760, 2055, 2672, 2869
BpuMI	CCSGG	2 cut(s)	2554, 2555
BsaAI	YACGTR	1 cut(s)	73
BsaBI	GATNNNNATC	1 cut(s)	2079
BsaHI	GRCGYC	5 cut(s)	164, 204, 216, 779, 3026
BsaI	GGTCTC	1 cut(s)	2845
BsaJI	CCNNGG	6 cut(s)	167, 360, 1648, 1804, 2386, 2553
BsaWI	WCCGGW	1 cut(s)	64
Bsc4I	CCNNNNNNNGG	8 cut(s)	425, 1608, 1805, 1865, 1886, 2187, 2422, 3074
Bse118I	RCCGGY	1 cut(s)	775
Bse1I	ACTGG	7 cut(s)	219, 409, 760, 913, 1395, 1906, 2942
Bse21I	CCTNAGG	1 cut(s)	1517
Bse3DI	GCAATG	2 cut(s)	1058, 1096
Bse8I	GATNNNNATC	1 cut(s)	2079
BseBI	CCWGG	3 cut(s)	1649, 2387, 2922
BseDI	CCNNGG	6 cut(s)	167, 360, 1648, 1804, 2386, 2553
BseGI	GGATG	6 cut(s)	109, 456, 1971, 2455, 2629, 2701
BseJI	GATNNNNATC	1 cut(s)	2079
BseLI	CCNNNNNNNGG	8 cut(s)	425, 1608, 1805, 1865, 1886, 2187, 2422, 3074
BseMI	GCAATG	2 cut(s)	1058, 1096
BseMII	CTCAG	5 cut(s)	19, 631, 803, 1076, 1491
BseNI	ACTGG	7 cut(s)	219, 409, 760, 913, 1395, 1906, 2942
BseRI	GAGGAG	3 cut(s)	23, 2435, 2953
BseX3I	CGGCCG	1 cut(s)	1830
BseXI	GCAGC	2 cut(s)	1403, 2252
BsgI	GTGCAG	1 cut(s)	405
Bsh1236I	CGCG	1 cut(s)	146
Bsh1285I	CGRYCG	1 cut(s)	1833
BshNI	GGYRCC	3 cut(s)	163, 203, 3025
BsiEI	CGRYCG	1 cut(s)	1833
BsiHKAI	GWGCWC	1 cut(s)	85
BsiHKCI	CYCGRG	1 cut(s)	2553
BsiSI	CCGG	6 cut(s)	65, 201, 776, 992, 1416, 2554
BslFI	GGGAC	4 cut(s)	627, 925, 2208, 2578
BslI	CCNNNNNNNGG	8 cut(s)	425, 1608, 1805, 1865, 1886, 2187, 2422, 3074
BsmAI	GTCTC	2 cut(s)	1086, 2845
BsmFI	GGGAC	4 cut(s)	627, 925, 2208, 2578
BsmI	GAATGC	1 cut(s)	447
Bso31I	GGTCTC	1 cut(s)	2845
BsoBI	CYCGRG	1 cut(s)	2553
Bsp119I	TTCGAA	1 cut(s)	276
Bsp1286I	GDGCHC	2 cut(s)	85, 3082
Bsp1407I	TGTACA	2 cut(s)	578, 2828
Bsp143I	GATC	9 cut(s)	335, 462, 1307, 1345, 2080, 2177, 2323, 2764, 3032
BspCNI	CTCAG	5 cut(s)	18, 630, 804, 1077, 1490
BspFNI	CGCG	1 cut(s)	146
BspLI	GGNNCC	6 cut(s)	100, 165, 205, 2179, 3027, 3079
BspMAI	CTGCAG	3 cut(s)	272, 1233, 2230
BspOI	GCTAGC	1 cut(s)	128
BspPI	GGATC	7 cut(s)	343, 470, 1353, 2075, 2172, 2185, 3027
BspT104I	TTCGAA	1 cut(s)	276
BspT107I	GGYRCC	3 cut(s)	163, 203, 3025
BspTI	CTTAAG	1 cut(s)	1009
BspTNI	GGTCTC	1 cut(s)	2845
BsrDI	GCAATG	2 cut(s)	1058, 1096
BsrFI	RCCGGY	1 cut(s)	775
BsrGI	TGTACA	2 cut(s)	578, 2828
BsrI	ACTGG	7 cut(s)	219, 409, 760, 913, 1395, 1906, 2942
BssAI	RCCGGY	1 cut(s)	775
BssECI	CCNNGG	6 cut(s)	167, 360, 1648, 1804, 2386, 2553
BssMI	GATC	9 cut(s)	335, 462, 1307, 1345, 2080, 2177, 2323, 2764, 3032
BssNI	GRCGYC	5 cut(s)	164, 204, 216, 779, 3026
BssSI	CACGAG	3 cut(s)	2735, 2865, 3013
BssT1I	CCWWGG	2 cut(s)	360, 1804
Bst2BI	CACGAG	3 cut(s)	2735, 2865, 3013
Bst2UI	CCWGG	3 cut(s)	1649, 2387, 2922
Bst4CI	ACNGT	6 cut(s)	40, 921, 1558, 1705, 1864, 2523
Bst6I	CTCTTC	2 cut(s)	2001, 2140
BstACI	GRCGYC	5 cut(s)	164, 204, 216, 779, 3026
BstAFI	CTTAAG	1 cut(s)	1009
BstAPI	GCANNNNNTGC	2 cut(s)	2225, 2287
BstAUI	TGTACA	2 cut(s)	578, 2828
BstBAI	YACGTR	1 cut(s)	73
BstBI	TTCGAA	1 cut(s)	276
BstC8I	GCNNGC	4 cut(s)	126, 1229, 2461, 2514
BstENI	CCTNNNNNAGG	1 cut(s)	1803
BstF5I	GGATG	6 cut(s)	109, 456, 1971, 2455, 2629, 2701
BstFNI	CGCG	1 cut(s)	146
BstH2I	RGCGCY	4 cut(s)	125, 167, 207, 3029
BstHHI	GCGC	5 cut(s)	124, 166, 206, 2584, 3028
BstKTI	GATC	9 cut(s)	338, 465, 1310, 1348, 2083, 2180, 2326, 2767, 3035
BstMAI	GTCTC	2 cut(s)	1086, 2845
BstMBI	GATC	9 cut(s)	335, 462, 1307, 1345, 2080, 2177, 2323, 2764, 3032
BstMCI	CGRYCG	1 cut(s)	1833
BstMWI	GCNNNNNNNGC	7 cut(s)	195, 215, 674, 1838, 2225, 2287, 2811
BstNI	CCWGG	3 cut(s)	1649, 2387, 2922
BstNSI	RCATGY	1 cut(s)	1791
BstSCI	CCNGG	5 cut(s)	1647, 2385, 2552, 2553, 2920
BstSFI	CTRYAG	3 cut(s)	268, 1229, 2226
BstUI	CGCG	1 cut(s)	146
BstV1I	GCAGC	2 cut(s)	1403, 2252
BstV2I	GAAGAC	3 cut(s)	1118, 1630, 1660
BstX2I	RGATCY	5 cut(s)	335, 1307, 1345, 2177, 3032
BstYI	RGATCY	5 cut(s)	335, 1307, 1345, 2177, 3032
BstZI	CGGCCG	1 cut(s)	1830
Bsu36I	CCTNAGG	1 cut(s)	1517
BtgZI	GCGATG	3 cut(s)	335, 460, 2222
BtsCI	GGATG	6 cut(s)	109, 456, 1971, 2455, 2629, 2701
BtsI	GCAGTG	1 cut(s)	2163
BtsIMutI	CAGTG	7 cut(s)	36, 226, 402, 906, 1701, 2163, 2908
Cac8I	GCNNGC	4 cut(s)	126, 1229, 2461, 2514
CaiI	CAGNNNCTG	1 cut(s)	1084
CfoI	GCGC	5 cut(s)	124, 166, 206, 2584, 3028
Cfr10I	RCCGGY	1 cut(s)	775
Cfr13I	GGNCC	9 cut(s)	62, 357, 479, 723, 767, 1295, 1352, 1817, 2114
Cfr9I	CCCGGG	1 cut(s)	2553
CpoI	CGGWCCG	1 cut(s)	62
CseI	GACGC	3 cut(s)	224, 768, 3068
Csp6I	GTAC	9 cut(s)	579, 1679, 1905, 1993, 2441, 2489, 2524, 2550, 2829
CspI	CGGWCCG	1 cut(s)	62
CviQI	GTAC	9 cut(s)	579, 1679, 1905, 1993, 2441, 2489, 2524, 2550, 2829
DinI	GGCGCC	3 cut(s)	165, 205, 3027
DpnI	GATC	9 cut(s)	337, 464, 1309, 1347, 2082, 2179, 2325, 2766, 3034
DpnII	GATC	9 cut(s)	335, 462, 1307, 1345, 2080, 2177, 2323, 2764, 3032
DrdI	GACNNNNNNGTC	2 cut(s)	919, 1643
DseDI	GACNNNNNNGTC	2 cut(s)	919, 1643
EaeI	YGGCCR	2 cut(s)	1830, 2874
EagI	CGGCCG	1 cut(s)	1830
Eam1104I	CTCTTC	2 cut(s)	2001, 2140
EarI	CTCTTC	2 cut(s)	2001, 2140
Ecl136II	GAGCTC	1 cut(s)	83
EclXI	CGGCCG	1 cut(s)	1830
Eco130I	CCWWGG	2 cut(s)	360, 1804
Eco24I	GRGCYC	2 cut(s)	85, 3082
Eco31I	GGTCTC	1 cut(s)	2845
Eco32I	GATATC	2 cut(s)	2708, 3042
Eco47I	GGWCC	5 cut(s)	62, 357, 723, 767, 1352
Eco47III	AGCGCT	1 cut(s)	123
Eco52I	CGGCCG	1 cut(s)	1830
Eco53kI	GAGCTC	1 cut(s)	83
Eco57I	CTGAAG	2 cut(s)	1338, 1550
Eco81I	CCTNAGG	1 cut(s)	1517
Eco88I	CYCGRG	1 cut(s)	2553
EcoICRI	GAGCTC	1 cut(s)	83
EcoNI	CCTNNNNNAGG	1 cut(s)	1803
EcoRI	GAATTC	3 cut(s)	744, 851, 2780
EcoRII	CCWGG	3 cut(s)	1647, 2385, 2920
EcoRV	GATATC	2 cut(s)	2708, 3042
EcoT14I	CCWWGG	2 cut(s)	360, 1804
EcoT38I	GRGCYC	2 cut(s)	85, 3082
EgeI	GGCGCC	3 cut(s)	165, 205, 3027
EheI	GGCGCC	3 cut(s)	165, 205, 3027
ErhI	CCWWGG	2 cut(s)	360, 1804
FalI	AAGNNNNNCTT	4 cut(s)	1998, 2030, 2742, 2774
FaqI	GGGAC	4 cut(s)	627, 925, 2208, 2578
FauI	CCCGC	1 cut(s)	614
FbaI	TGATCA	2 cut(s)	2323, 2764
FblI	GTMKAC	1 cut(s)	28
Fnu4HI	GCNGC	7 cut(s)	147, 187, 207, 295, 1392, 2266, 2974
FokI	GGATG	6 cut(s)	96, 463, 1958, 2462, 2636, 2708
FriOI	GRGCYC	2 cut(s)	85, 3082
Fsp4HI	GCNGC	7 cut(s)	147, 187, 207, 295, 1392, 2266, 2974
FspBI	CTAG	7 cut(s)	125, 1538, 1589, 2405, 2657, 3030, 3063
GlaI	GCGC	5 cut(s)	123, 165, 205, 2583, 3027
GluI	GCNGC	7 cut(s)	147, 187, 207, 295, 1392, 2266, 2974
GsuI	CTGGAG	1 cut(s)	2959
HaeII	RGCGCY	4 cut(s)	125, 167, 207, 3029
HapII	CCGG	6 cut(s)	65, 201, 776, 992, 1416, 2554
HgaI	GACGC	3 cut(s)	224, 768, 3068
HhaI	GCGC	5 cut(s)	124, 166, 206, 2584, 3028
Hin1I	GRCGYC	5 cut(s)	164, 204, 216, 779, 3026
Hin6I	GCGC	5 cut(s)	122, 164, 204, 2582, 3026
HinP1I	GCGC	5 cut(s)	122, 164, 204, 2582, 3026
HincII	GTYRAC	2 cut(s)	1465, 2367
HindII	GTYRAC	2 cut(s)	1465, 2367
HindIII	AAGCTT	2 cut(s)	666, 2093
HpaII	CCGG	6 cut(s)	65, 201, 776, 992, 1416, 2554
HphI	GGTGA	3 cut(s)	833, 1706, 3036
Hpy99I	CGWCG	6 cut(s)	119, 218, 784, 1632, 1838, 3062
HpyAV	CCTTC	9 cut(s)	1184, 2050, 2185, 2267, 2315, 2449, 2661, 2789, 3019
HpyCH4III	ACNGT	6 cut(s)	40, 921, 1558, 1705, 1864, 2523
HpyCH4IV	ACGT	4 cut(s)	72, 1046, 1630, 2025
HpyF10VI	GCNNNNNNNGC	7 cut(s)	195, 215, 674, 1838, 2225, 2287, 2811
HpySE526I	ACGT	4 cut(s)	72, 1046, 1630, 2025
Hsp92I	GRCGYC	5 cut(s)	164, 204, 216, 779, 3026
HspAI	GCGC	5 cut(s)	122, 164, 204, 2582, 3026
KasI	GGCGCC	3 cut(s)	163, 203, 3025
Ksp22I	TGATCA	2 cut(s)	2323, 2764
Kzo9I	GATC	9 cut(s)	335, 462, 1307, 1345, 2080, 2177, 2323, 2764, 3032
LmnI	GCTCC	4 cut(s)	98, 203, 655, 3077
Lsp1109I	GCAGC	2 cut(s)	1403, 2252
LweI	GCATC	4 cut(s)	1517, 1953, 2290, 2362
MaeI	CTAG	7 cut(s)	125, 1538, 1589, 2405, 2657, 3030, 3063
MaeII	ACGT	4 cut(s)	72, 1046, 1630, 2025
MaeIII	GTNAC	5 cut(s)	1312, 1558, 1694, 2862, 2908
MalI	GATC	9 cut(s)	337, 464, 1309, 1347, 2082, 2179, 2325, 2766, 3034
MboI	GATC	9 cut(s)	335, 462, 1307, 1345, 2080, 2177, 2323, 2764, 3032
MfeI	CAATTG	1 cut(s)	2568
MflI	RGATCY	5 cut(s)	335, 1307, 1345, 2177, 3032
MhlI	GDGCHC	2 cut(s)	85, 3082
MlsI	TGGCCA	1 cut(s)	2876
MluNI	TGGCCA	1 cut(s)	2876
Mly113I	GGCGCC	3 cut(s)	164, 204, 3026
MlyI	GAGTC	6 cut(s)	224, 430, 609, 1469, 1691, 2471
MmeI	TCCRAC	3 cut(s)	1626, 1912, 2257
Mox20I	TGGCCA	1 cut(s)	2876
MroXI	GAANNNNTTC	4 cut(s)	841, 1238, 1267, 2304
MscI	TGGCCA	1 cut(s)	2876
MseI	TTAA	7 cut(s)	515, 794, 1010, 1823, 2028, 2058, 2984
MslI	CAYNNNNRTG	1 cut(s)	2448
Msp20I	TGGCCA	1 cut(s)	2876
MspA1I	CMGCKG	5 cut(s)	186, 621, 1691, 2773, 2973
MspCI	CTTAAG	1 cut(s)	1009
MspI	CCGG	6 cut(s)	65, 201, 776, 992, 1416, 2554
MspR9I	CCNGG	5 cut(s)	1649, 2387, 2554, 2555, 2922
MunI	CAATTG	1 cut(s)	2568
Mva1269I	GAATGC	1 cut(s)	447
MvaI	CCWGG	3 cut(s)	1649, 2387, 2922
MvnI	CGCG	1 cut(s)	146
MwoI	GCNNNNNNNGC	7 cut(s)	195, 215, 674, 1838, 2225, 2287, 2811
NarI	GGCGCC	3 cut(s)	164, 204, 3026
NciI	CCSGG	2 cut(s)	2554, 2555
NdeII	GATC	9 cut(s)	335, 462, 1307, 1345, 2080, 2177, 2323, 2764, 3032
NheI	GCTAGC	1 cut(s)	124
NlaIV	GGNNCC	6 cut(s)	100, 165, 205, 2179, 3027, 3079
NmeAIII	GCCGAG	1 cut(s)	192
NmuCI	GTSAC	4 cut(s)	1558, 1694, 2862, 2908
NspI	RCATGY	1 cut(s)	1791
NspV	TTCGAA	1 cut(s)	276
PctI	GAATGC	1 cut(s)	447
PdmI	GAANNNNTTC	4 cut(s)	841, 1238, 1267, 2304
PfeI	GAWTC	4 cut(s)	157, 1156, 2728, 3005
PflMI	CCANNNNNTGG	2 cut(s)	1608, 3074
PkrI	GCNGC	7 cut(s)	148, 188, 208, 296, 1393, 2267, 2975
PleI	GAGTC	6 cut(s)	224, 430, 609, 1469, 1691, 2471
PluTI	GGCGCC	3 cut(s)	167, 207, 3029
PpsI	GAGTC	6 cut(s)	224, 430, 609, 1469, 1691, 2471
Ppu21I	YACGTR	1 cut(s)	73
PshBI	ATTAAT	1 cut(s)	1823
PsiI	TTATAA	1 cut(s)	2124
Psp124BI	GAGCTC	1 cut(s)	85
Psp6I	CCWGG	3 cut(s)	1647, 2385, 2920
PspGI	CCWGG	3 cut(s)	1647, 2385, 2920
PspN4I	GGNNCC	6 cut(s)	100, 165, 205, 2179, 3027, 3079
PspPI	GGNCC	9 cut(s)	62, 357, 479, 723, 767, 1295, 1352, 1817, 2114
PstI	CTGCAG	3 cut(s)	272, 1233, 2230
PstNI	CAGNNNCTG	1 cut(s)	1084
PsuI	RGATCY	5 cut(s)	335, 1307, 1345, 2177, 3032
PvuII	CAGCTG	2 cut(s)	1691, 2773
RsaI	GTAC	9 cut(s)	580, 1680, 1906, 1994, 2442, 2490, 2525, 2551, 2830
RsaNI	GTAC	9 cut(s)	579, 1679, 1905, 1993, 2441, 2489, 2524, 2550, 2829
RseI	CAYNNNNRTG	1 cut(s)	2448
Rsr2I	CGGWCCG	1 cut(s)	62
RsrII	CGGWCCG	1 cut(s)	62
SacI	GAGCTC	1 cut(s)	85
SaqAI	TTAA	7 cut(s)	515, 794, 1010, 1823, 2028, 2058, 2984
SatI	GCNGC	7 cut(s)	147, 187, 207, 295, 1392, 2266, 2974
Sau3AI	GATC	9 cut(s)	335, 462, 1307, 1345, 2080, 2177, 2323, 2764, 3032
Sau96I	GGNCC	9 cut(s)	62, 357, 479, 723, 767, 1295, 1352, 1817, 2114
SchI	GAGTC	6 cut(s)	224, 430, 609, 1469, 1691, 2471
ScrFI	CCNGG	5 cut(s)	1649, 2387, 2554, 2555, 2922
SduI	GDGCHC	2 cut(s)	85, 3082
SfaNI	GCATC	4 cut(s)	1517, 1953, 2290, 2362
SfcI	CTRYAG	3 cut(s)	268, 1229, 2226
SfoI	GGCGCC	3 cut(s)	165, 205, 3027
SfuI	TTCGAA	1 cut(s)	276
SinI	GGWCC	5 cut(s)	62, 357, 723, 767, 1352
SmaI	CCCGGG	1 cut(s)	2555
SmiMI	CAYNNNNRTG	1 cut(s)	2448
SmlI	CTYRAG	5 cut(s)	739, 1009, 2070, 2651, 2848
SmoI	CTYRAG	5 cut(s)	739, 1009, 2070, 2651, 2848
SspDI	GGCGCC	3 cut(s)	163, 203, 3025
SspI	AATATT	2 cut(s)	928, 938
SspMI	CTAG	7 cut(s)	125, 1538, 1589, 2405, 2657, 3030, 3063
SstI	GAGCTC	1 cut(s)	85
StyD4I	CCNGG	5 cut(s)	1647, 2385, 2552, 2553, 2920
StyI	CCWWGG	2 cut(s)	360, 1804
TaaI	ACNGT	6 cut(s)	40, 921, 1558, 1705, 1864, 2523
TaiI	ACGT	4 cut(s)	75, 1049, 1633, 2028
TaqII	GACCGA	1 cut(s)	50
TatI	WGTACW	3 cut(s)	578, 2440, 2828
TauI	GCSGC	5 cut(s)	149, 189, 209, 297, 2976
TfiI	GAWTC	4 cut(s)	157, 1156, 2728, 3005
Tru1I	TTAA	7 cut(s)	515, 794, 1010, 1823, 2028, 2058, 2984
Tru9I	TTAA	7 cut(s)	515, 794, 1010, 1823, 2028, 2058, 2984
TscAI	CASTG	7 cut(s)	43, 226, 409, 913, 1708, 2163, 2908
TseFI	GTSAC	4 cut(s)	1558, 1694, 2862, 2908
TseI	GCWGC	2 cut(s)	1391, 2265
Tsp45I	GTSAC	4 cut(s)	1558, 1694, 2862, 2908
TspDTI	ATGAA	9 cut(s)	844, 881, 1350, 1751, 2019, 2286, 2313, 2712, 3101
TspGWI	ACGGA	3 cut(s)	1119, 2328, 2636
TspMI	CCCGGG	1 cut(s)	2553
TspRI	CASTG	7 cut(s)	43, 226, 409, 913, 1708, 2163, 2908
Van91I	CCANNNNNTGG	2 cut(s)	1608, 3074
Vha464I	CTTAAG	1 cut(s)	1009
VpaK11BI	GGWCC	5 cut(s)	62, 357, 723, 767, 1352
VspI	ATTAAT	1 cut(s)	1823
XagI	CCTNNNNNAGG	1 cut(s)	1803
XapI	RAATTY	7 cut(s)	430, 744, 838, 851, 1584, 1758, 2780
XbaI	TCTAGA	1 cut(s)	1537
XceI	RCATGY	1 cut(s)	1791
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1811
XmaI	CCCGGG	1 cut(s)	2553
XmiI	GTMKAC	1 cut(s)	28
XmnI	GAANNNNTTC	4 cut(s)	841, 1238, 1267, 2304
XspI	CTAG	7 cut(s)	125, 1538, 1589, 2405, 2657, 3030, 3063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.