Prupe.4G104700_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000088
Physical Location & Seq
Forward (+)
5404724 .. 5411719
6996 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G104700.1

Sequence Viewer

Length: 3105 bp
ATGATCAATTTGAGGAGGATGTTGAAGCAACCATGGCCTCTTTCAGCGTCCTTTTGCAGTCTATGCTTTCTCAGCTGCTTCTGGTTTCAAGTATCCATGGCTCAAAATGCTACTACCGATCCATCTGAAGTGACGGCGCTGCTCTCAATATTCCGGCATTGGGAAATGCAAGCCCTGCCTATCCGTGGAGGAGAGCCATGCATTGGATTTGCCATCAATGGAAGCGAGTTTGAAAAGCCAGAGAATAATCCAGCCGTCAGTTGTGACTGTACTTATGACAAAAATACTACCTGCCACATTACCAAACTTCGAGTTCATGCTCTGAACAAACGAGGGATGTTTCCAAAAGAATTTGAAGCTTTAAGATATCTGGCCGTTTTGAAACTTGATCATAACTATTTCACCGGTCCCCTACCAGCATTCATCGGCAATATGTCTGCGTTGACGGTATTGTCAGTTTCCCACAATTCGTTCTCTGGGCCCATCCCCAAGGAGCTTGGAAACCTTAAGGAGCTATTTATGCTGTCCTTTGGATCAAATAATTTCTCCGGAACACTCCCTCCAGAACTTGGTAACTTAGTCAATCTCAGGCTATTTTACATGGACAGCTGTGGACTCGGTGGAGAAATTCCTTCAACATTTGCTAAGCTCATCAACATGAAAGAACTCTATGCATCAGACAATCCTGTCTCAGGAAAGATACCTTCTTTCATTGGGAATTGGAGAAATCTAACTTCTTTGAGATTTCAAGGGAACTCTTTTGAAGGTCCAATACCAACCAGTTTTTCTCAACTGACTTCATTGGAATCCATGCGAATCAGTGATATATATTATGTGAGCTCGTCTCTTGATTTCATAAGAAATTTGAAGAACTTAACTGATTTAGTTCTACGGAATACATTAATCAATGGTAGCATCCCTACTGATTTTGGAGAATATCAACGTTTAAAGATACTGGATCTGGGTTTCAACAATTTAACAGGCCAACTCCCAAGTTCTTTGTTCAACATGAGTTCTCTTACATATTTATTTCTTGGAAACAATAGTCTGTCTGGACCTCTTCCAAGCCAAAAGAGCAATCAACTTCAGACTATAGATTTGTCTTACAACTATTTCTCAGGAAGCTTTCCCCCATGGGTAACCACAATATCGCAACTGAATTTAGTGGTCAACAACTTCACATTTGACAGTTCAAACATAACTCTTCCTGGATTGAATTGCCTCCAGAGGAATTTTCCATGCAATCGAAATACCCCACGATATACAAACTTCTCAATCAAGTGTGGAGGACCACAAATGAGAGGAAATGACGGCATATTGTATGAGGCTGAAGACTCAGCTCTTGGCCCAGCAACATTTAATGTAAACAGTGCACAGAACTGGGCTGTTAGCAATGCGGGTTTTTCTGATAATTTGACTCAATCATTTGTGGAAACCACCCTTAAGCAAGTCTCCGGTGCAGATTTGACACCAGAGCTTTTCGAGACTTCAAGAGTGTCCCTAGGTTCACTTAGATACTATGGCCTGGGTCTTCATAATGGACCTTATACTGTAACATTGCAATTTGCAGAAACGGTTTTTGATAGCCGTGATACACAAACTTCGCAAAGTCTAGGAAGGCGTGTATTTGATATCTATATTCAAGGGAACCTCATAAGGAAGGACTTCGACATATCGAATGAGGCAGGTGGGGTTAACAGAGCAGTTGCGAGACCCTTCAACGTTACTGTGACAGAGAATTACCTAGATATTCATCTGTTCTGGGCTGGTAAGGGAACATGCTGCATACCTGAACAAGGTAATTATGGCCCGCTAATATCAGCTGTCCATGCTGCTTCAGATCTTGCACCAACTACTCCAGGAAAGAAGAGCAGGACTGGGTTGATAGTTGGTATTGCAGTCCCTGTCGGGGTAGTGATCTTGCTATTATTATTTGTAGTTTTATATATGCGGAGAAAAACATCAGAAAAAGATGACGATGAAGATCTTCTAGGATTAGGTCCCCGACCAAATACTTTCAGTTATGCTGAGTTGAGAGCTGCAACAGAAGATTTTAATCCTTCAAATAAGCTAGGAGAGGGAGGATATGGACCTGTTTATAAGGGTACACTTTCTGATGGGAGGGTAGTGGCTGTGAAGCAACTTTCAGTAGCATCTCACCAAGGGAAGAGTCAATTTGTAACCGAGATTGCTACGATATCTACAGTCCAACATCGCAATCTAGTGAAATTGTACGGATGCTGCATTGAAGGAAGCCACCGTATTTTGGTTTATGAGTATCTTGAAAACAAGAGCCTTGATCAGGCACTTTTTGGAAGAAATGACTTGCACCTTGACTGGCCTACCCGCTTTAATATATTATTAGGAACAGCAAGAGGACTTGCTTACCTTCATGAGGAGTCAAAGCCCAGGATTGTACATCGAGACGTCAAAGCCAGTAATATTTTGCTAGATGCAGAACTCTCCCCAAAAATATCAGATTTTGGATGGGCAAAGCTTTATGATGACAAGAAAACACACATGAGCACCCGGGTTGCAGGCACAATAGGCTATTTGGCGCCGGAGTATGCAATGCGCGGACGTCTGACAGAGAAGGCTGATGTTTTTGGTTTCGGGGTTGTTGCTTTGGAGATCCTCAGCGGGAGACCAAATTCTGACGACAACTTGGATCCTGAGAAGATTTATCTTCTTGAATGGGCATGGACTCTACATGAAAACGACCAGAGTCTGGGGCTGGTGGATCCAAGATTGATAGAGTTTGATGAAAATGACGCAACTAGATTGATAAAAGCAGCTCTCCTCTGCACTCAGGCTTCACCAATGATGAGGCCATCGATGTCACGTGTGGTGACAATACTTTCTGGAGATATTGAAGCAAGCACTGTTATGTCAAAGCCAAGTTATTTGGCAGATTGGGATTTCAAAGATGTAACCACAAGTAGCTTTTTGGTGGATGATGATACCTCATCAACTGAGAGCAACGTTCTCCTCAACCATCAGACTGAAGGGAGCACAACTGGTGCTAGCTCCAGAATTGACCCTGCCCCGTCTCCGGTAAATGTGACTGGATCATTGCTCACTGGCATTATAGGAGAAGGAATGTGA

Protein Analysis

1035

Amino Acids

114.06

Weight (kDa)

5.69

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2100
AarI CACCTGC 1 cut(s) 1676
AasI GACNNNNNNGTC 2 cut(s) 451, 686
AatII GACGTC 2 cut(s) 2430, 2584
Acc36I ACCTGC 2 cut(s) 299, 1676
AccB1I GGYRCC 1 cut(s) 2557
AccB7I CCANNNNNTGG 3 cut(s) 203, 569, 2728
AccII CGCG 1 cut(s) 2577
AccIII TCCGGA 1 cut(s) 548
AciI CCGC 6 cut(s) 1397, 1811, 1951, 2347, 2577, 2640
AclI AACGTT 3 cut(s) 943, 1722, 2982
AclWI GGATC 9 cut(s) 113, 541, 966, 2626, 2663, 2676, 2735, 2748, 3076
AcoI YGGCCR 1 cut(s) 372
AcsI RAATTY 6 cut(s) 350, 627, 862, 1159, 1231, 2650
AcuI CTGAAG 5 cut(s) 147, 1070, 1350, 1821, 3024
AcvI CACGTG 1 cut(s) 2843
AcyI GRCGYC 3 cut(s) 2427, 2558, 2581
AfaI GTAC 4 cut(s) 271, 2107, 2234, 2418
AflII CTTAAG 2 cut(s) 506, 1442
AflIII ACRYGT 1 cut(s) 2842
AgeI ACCGGT 1 cut(s) 404
AjnI CCWGG 4 cut(s) 1207, 1524, 1858, 2408
AjuI GAANNNNNNNTTGG 2 cut(s) 769, 801
AloI GAACNNNNNNTCC 2 cut(s) 544, 576
Alw21I GWGCWC 4 cut(s) 842, 1375, 2528, 3014
Alw26I GTCTC 8 cut(s) 694, 849, 1456, 1478, 1705, 2418, 2638, 3054
Alw44I GTGCAC 1 cut(s) 1371
AlwI GGATC 9 cut(s) 113, 541, 966, 2626, 2663, 2676, 2735, 2748, 3076
AlwNI CAGNNNCTG 2 cut(s) 1904, 2728
Ama87I CYCGRG 1 cut(s) 2529
Aor13HI TCCGGA 1 cut(s) 548
AoxI GGCC 9 cut(s) 35, 372, 479, 982, 1345, 1522, 1807, 2339, 2828
ApaI GGGCCC 1 cut(s) 483
ApaLI GTGCAC 1 cut(s) 1371
ApeKI GCWGC 7 cut(s) 75, 139, 1782, 1832, 2039, 2241, 2792
ApoI RAATTY 6 cut(s) 350, 627, 862, 1159, 1231, 2650
ArsI GACNNNNNNTTYG 2 cut(s) 1081, 1113
AseI ATTAAT 1 cut(s) 902
AsiGI ACCGGT 1 cut(s) 404
Asp700I GAANNNNTTC 2 cut(s) 1664, 1986
AspA2I CCTAGG 1 cut(s) 1501
AspLEI GCGC 3 cut(s) 139, 2560, 2577
AsuC2I CCSGG 2 cut(s) 2530, 2531
AsuHPI GGTGA 4 cut(s) 394, 2150, 2808, 2860
AsuNHI GCTAGC 1 cut(s) 3023
AvaI CYCGRG 1 cut(s) 2529
AvaII GGWCC 7 cut(s) 407, 767, 1055, 1289, 1541, 2000, 2090
AvrII CCTAGG 1 cut(s) 1501
BaeGI GKGCMC 2 cut(s) 483, 1375
BamHI GGATCC 2 cut(s) 2668, 2740
BanI GGYRCC 1 cut(s) 2557
BanII GRGCYC 2 cut(s) 483, 842
BarI GAAGNNNNNNTAC 2 cut(s) 756, 788
BbrPI CACGTG 1 cut(s) 2843
BbsI GAAGAC 2 cut(s) 1338, 1523
Bbv12I GWGCWC 4 cut(s) 842, 1375, 2528, 3014
BbvCI CCTCAGC 1 cut(s) 2636
BbvI GCAGC 7 cut(s) 62, 126, 1769, 1819, 2026, 2228, 2804
BccI CCATC 7 cut(s) 130, 221, 491, 2111, 2481, 2839, 3003
BceAI ACGGC 5 cut(s) 150, 239, 359, 1327, 1572
BciT130I CCWGG 4 cut(s) 1209, 1526, 1860, 2410
BciVI GTATCC 1 cut(s) 103
BclI TGATCA 3 cut(s) 3, 388, 2299
BcnI CCSGG 2 cut(s) 2530, 2531
BcoDI GTCTC 8 cut(s) 694, 849, 1456, 1478, 1705, 2418, 2638, 3054
BfaI CTAG 9 cut(s) 1502, 1613, 1745, 1991, 2072, 2222, 2450, 2778, 3024
BfmI CTRYAG 2 cut(s) 1092, 2202
BfoI RGCGCY 2 cut(s) 140, 2561
BfrI CTTAAG 2 cut(s) 506, 1442
BfuAI ACCTGC 2 cut(s) 299, 1676
BfuI GTATCC 1 cut(s) 103
BglII AGATCT 2 cut(s) 1840, 1984
BisI GCNGC 7 cut(s) 76, 140, 1783, 1833, 2040, 2242, 2793
BlnI CCTAGG 1 cut(s) 1501
BlpI GCTNAGC 1 cut(s) 645
BlsI GCNGC 7 cut(s) 77, 141, 1784, 1834, 2041, 2243, 2794
Bme1390I CCNGG 6 cut(s) 1209, 1526, 1860, 2410, 2530, 2531
Bme18I GGWCC 7 cut(s) 407, 767, 1055, 1289, 1541, 2000, 2090
BmeT110I CYCGRG 1 cut(s) 2529
BmiI GGNNCC 7 cut(s) 409, 481, 1649, 2002, 2559, 2670, 2742
BmrFI CCNGG 6 cut(s) 1209, 1526, 1860, 2410, 2530, 2531
BmrI ACTGGG 2 cut(s) 1390, 1887
BmsI GCATC 5 cut(s) 683, 924, 2162, 2228, 2443
BmtI GCTAGC 1 cut(s) 3027
BmuI ACTGGG 2 cut(s) 1390, 1887
BoxI GACNNNNGTC 1 cut(s) 2724
BpiI GAAGAC 2 cut(s) 1338, 1523
BplI GAGNNNNNCTC 2 cut(s) 829, 861
BpmI CTGGAG 5 cut(s) 546, 1208, 1842, 2883, 3013
Bpu10I CCTNAGC 1 cut(s) 2636
Bpu1102I GCTNAGC 1 cut(s) 645
BpuMI CCSGG 2 cut(s) 2530, 2531
Bsa29I ATCGAT 1 cut(s) 2834
BsaAI YACGTR 1 cut(s) 2843
BsaBI GATNNNNATC 3 cut(s) 1752, 1983, 2055
BsaHI GRCGYC 3 cut(s) 2427, 2558, 2581
BsaI GGTCTC 2 cut(s) 1705, 2638
BsaWI WCCGGW 4 cut(s) 404, 548, 1454, 3052
BsaXI ACNNNNNCTCC 2 cut(s) 544, 574
Bse118I RCCGGY 1 cut(s) 404
Bse1I ACTGG 9 cut(s) 780, 960, 1385, 1882, 2342, 2436, 3022, 3070, 3085
Bse3DI GCAATG 4 cut(s) 1399, 1556, 2577, 3071
Bse8I GATNNNNATC 3 cut(s) 1752, 1983, 2055
BseAI TCCGGA 1 cut(s) 548
BseBI CCWGG 4 cut(s) 1209, 1526, 1860, 2410
BseCI ATCGAT 1 cut(s) 2834
BseGI GGATG 7 cut(s) 24, 342, 483, 915, 2243, 2492, 2959
BseJI GATNNNNATC 3 cut(s) 1752, 1983, 2055
BseMI GCAATG 4 cut(s) 1399, 1556, 2577, 3071
BseNI ACTGG 9 cut(s) 780, 960, 1385, 1882, 2342, 2436, 3022, 3070, 3085
BseRI GAGGAG 5 cut(s) 28, 204, 2411, 2789, 2978
BseSI GKGCMC 2 cut(s) 483, 1375
BseXI GCAGC 7 cut(s) 62, 126, 1769, 1819, 2026, 2228, 2804
BseYI CCCAGC 1 cut(s) 1348
BsgI GTGCAG 2 cut(s) 1479, 2788
Bsh1236I CGCG 1 cut(s) 2577
BshFI GGCC 9 cut(s) 37, 374, 481, 984, 1347, 1524, 1809, 2341, 2830
BshNI GGYRCC 1 cut(s) 2557
BshTI ACCGGT 1 cut(s) 404
BshVI ATCGAT 1 cut(s) 2834
BsiHKAI GWGCWC 4 cut(s) 842, 1375, 2528, 3014
BsiHKCI CYCGRG 1 cut(s) 2529
BsiSI CCGG 7 cut(s) 154, 405, 549, 1455, 2530, 2561, 3053
BslFI GGGAC 4 cut(s) 393, 1483, 1886, 1986
BsmAI GTCTC 8 cut(s) 694, 849, 1456, 1478, 1705, 2418, 2638, 3054
BsmBI CGTCTC 3 cut(s) 849, 2418, 3054
BsmFI GGGAC 4 cut(s) 393, 1483, 1886, 1986
BsmI GAATGC 1 cut(s) 419
BsnI GGCC 9 cut(s) 37, 374, 481, 984, 1347, 1524, 1809, 2341, 2830
Bso31I GGTCTC 2 cut(s) 1705, 2638
BsoBI CYCGRG 1 cut(s) 2529
Bsp120I GGGCCC 1 cut(s) 479
Bsp1286I GDGCHC 5 cut(s) 483, 842, 1375, 2528, 3014
Bsp13I TCCGGA 1 cut(s) 548
Bsp1407I TGTACA 1 cut(s) 2416
Bsp1720I GCTNAGC 1 cut(s) 645
Bsp19I CCATGG 3 cut(s) 32, 96, 1133
BspACI CCGC 6 cut(s) 1397, 1811, 1951, 2347, 2577, 2640
BspANI GGCC 9 cut(s) 37, 374, 481, 984, 1347, 1524, 1809, 2341, 2830
BspDI ATCGAT 1 cut(s) 2834
BspEI TCCGGA 1 cut(s) 548
BspFNI CGCG 1 cut(s) 2577
BspHI TCATGA 1 cut(s) 2392
BspLI GGNNCC 7 cut(s) 409, 481, 1649, 2002, 2559, 2670, 2742
BspMI ACCTGC 2 cut(s) 299, 1676
BspOI GCTAGC 1 cut(s) 3027
BspPI GGATC 9 cut(s) 113, 541, 966, 2626, 2663, 2676, 2735, 2748, 3076
BspQI GCTCTTC 1 cut(s) 1862
BspT107I GGYRCC 1 cut(s) 2557
BspTI CTTAAG 2 cut(s) 506, 1442
BspTNI GGTCTC 2 cut(s) 1705, 2638
BsrDI GCAATG 4 cut(s) 1399, 1556, 2577, 3071
BsrFI RCCGGY 1 cut(s) 404
BsrGI TGTACA 1 cut(s) 2416
BsrI ACTGG 9 cut(s) 780, 960, 1385, 1882, 2342, 2436, 3022, 3070, 3085
BssAI RCCGGY 1 cut(s) 404
BssNI GRCGYC 3 cut(s) 2427, 2558, 2581
BssT1I CCWWGG 6 cut(s) 32, 96, 489, 1133, 1501, 2161
Bst2UI CCWGG 4 cut(s) 1209, 1526, 1860, 2410
Bst6I CTCTTC 4 cut(s) 1065, 1209, 1862, 2162
BstACI GRCGYC 3 cut(s) 2427, 2558, 2581
BstAFI CTTAAG 2 cut(s) 506, 1442
BstAPI GCANNNNNTGC 2 cut(s) 63, 175
BstAUI TGTACA 1 cut(s) 2416
BstBAI YACGTR 1 cut(s) 2843
BstC8I GCNNGC 5 cut(s) 171, 1811, 2539, 2878, 3025
BstDSI CCRYGG 4 cut(s) 32, 96, 184, 1133
BstEII GGTNACC 1 cut(s) 1138
BstENI CCTNNNNNAGG 4 cut(s) 690, 1794, 2300, 2393
BstF5I GGATG 7 cut(s) 24, 342, 483, 915, 2243, 2492, 2959
BstFNI CGCG 1 cut(s) 2577
BstH2I RGCGCY 2 cut(s) 140, 2561
BstHHI GCGC 3 cut(s) 139, 2560, 2577
BstMAI GTCTC 8 cut(s) 694, 849, 1456, 1478, 1705, 2418, 2638, 3054
BstMWI GCNNNNNNNGC 9 cut(s) 34, 63, 72, 107, 175, 520, 1074, 1829, 2547
BstNI CCWGG 4 cut(s) 1209, 1526, 1860, 2410
BstNSI RCATGY 1 cut(s) 1782
BstPAI GACNNNNGTC 1 cut(s) 2724
BstPI GGTNACC 1 cut(s) 1138
BstSCI CCNGG 6 cut(s) 1207, 1524, 1858, 2408, 2528, 2529
BstSFI CTRYAG 2 cut(s) 1092, 2202
BstSLI GKGCMC 2 cut(s) 483, 1375
BstUI CGCG 1 cut(s) 2577
BstV1I GCAGC 7 cut(s) 62, 126, 1769, 1819, 2026, 2228, 2804
BstV2I GAAGAC 2 cut(s) 1338, 1523
BstX2I RGATCY 6 cut(s) 958, 1840, 1984, 2631, 2668, 2740
BstYI RGATCY 6 cut(s) 958, 1840, 1984, 2631, 2668, 2740
Bsu15I ATCGAT 1 cut(s) 2834
BsuI GTATCC 1 cut(s) 103
BsuRI GGCC 9 cut(s) 37, 374, 481, 984, 1347, 1524, 1809, 2341, 2830
BsuTUI ATCGAT 1 cut(s) 2834
BtgI CCRYGG 4 cut(s) 32, 96, 184, 1133
BtgZI GCGATG 1 cut(s) 2198
BtsCI GGATG 7 cut(s) 24, 342, 483, 915, 2243, 2492, 2959
BtsIMutI CAGTG 4 cut(s) 826, 1375, 2880, 3078
BveI ACCTGC 2 cut(s) 299, 1676
Cac8I GCNNGC 5 cut(s) 171, 1811, 2539, 2878, 3025
CaiI CAGNNNCTG 2 cut(s) 1904, 2728
CciI TCATGA 1 cut(s) 2392
CfoI GCGC 3 cut(s) 139, 2560, 2577
Cfr10I RCCGGY 1 cut(s) 404
Cfr9I CCCGGG 1 cut(s) 2529
ClaI ATCGAT 1 cut(s) 2834
CseI GACGC 2 cut(s) 36, 2780
Csp6I GTAC 4 cut(s) 270, 2106, 2233, 2417
CspAI ACCGGT 1 cut(s) 404
CviQI GTAC 4 cut(s) 270, 2106, 2233, 2417
DinI GGCGCC 1 cut(s) 2559
DraI TTTAAA 1 cut(s) 948
DrdI GACNNNNNNGTC 2 cut(s) 451, 686
DseDI GACNNNNNNGTC 2 cut(s) 451, 686
EaeI YGGCCR 1 cut(s) 372
Eam1104I CTCTTC 4 cut(s) 1065, 1209, 1862, 2162
EarI CTCTTC 4 cut(s) 1065, 1209, 1862, 2162
Ecl136II GAGCTC 1 cut(s) 840
Eco130I CCWWGG 6 cut(s) 32, 96, 489, 1133, 1501, 2161
Eco24I GRGCYC 2 cut(s) 483, 842
Eco31I GGTCTC 2 cut(s) 1705, 2638
Eco32I GATATC 3 cut(s) 368, 1633, 2199
Eco47I GGWCC 7 cut(s) 407, 767, 1055, 1289, 1541, 2000, 2090
Eco53kI GAGCTC 1 cut(s) 840
Eco57I CTGAAG 5 cut(s) 147, 1070, 1350, 1821, 3024
Eco72I CACGTG 1 cut(s) 2843
Eco88I CYCGRG 1 cut(s) 2529
Eco91I GGTNACC 1 cut(s) 1138
EcoICRI GAGCTC 1 cut(s) 840
EcoNI CCTNNNNNAGG 4 cut(s) 690, 1794, 2300, 2393
EcoO109I RGGNCCY 1 cut(s) 2000
EcoO65I GGTNACC 1 cut(s) 1138
EcoRII CCWGG 4 cut(s) 1207, 1524, 1858, 2408
EcoRV GATATC 3 cut(s) 368, 1633, 2199
EcoT14I CCWWGG 6 cut(s) 32, 96, 489, 1133, 1501, 2161
EcoT22I ATGCAT 2 cut(s) 203, 676
EcoT38I GRGCYC 2 cut(s) 483, 842
EgeI GGCGCC 1 cut(s) 2559
EheI GGCGCC 1 cut(s) 2559
ErhI CCWWGG 6 cut(s) 32, 96, 489, 1133, 1501, 2161
Esp3I CGTCTC 3 cut(s) 849, 2418, 3054
FaqI GGGAC 4 cut(s) 393, 1483, 1886, 1986
FauI CCCGC 4 cut(s) 1390, 1818, 2354, 2633
FbaI TGATCA 3 cut(s) 3, 388, 2299
Fnu4HI GCNGC 7 cut(s) 76, 140, 1783, 1833, 2040, 2242, 2793
FokI GGATG 7 cut(s) 31, 349, 470, 902, 2250, 2499, 2966
FriOI GRGCYC 2 cut(s) 483, 842
Fsp4HI GCNGC 7 cut(s) 76, 140, 1783, 1833, 2040, 2242, 2793
FspBI CTAG 9 cut(s) 1502, 1613, 1745, 1991, 2072, 2222, 2450, 2778, 3024
GlaI GCGC 3 cut(s) 138, 2559, 2576
GluI GCNGC 7 cut(s) 76, 140, 1783, 1833, 2040, 2242, 2793
GsaI CCCAGC 1 cut(s) 1352
GsuI CTGGAG 5 cut(s) 546, 1208, 1842, 2883, 3013
HaeII RGCGCY 2 cut(s) 140, 2561
HaeIII GGCC 9 cut(s) 37, 374, 481, 984, 1347, 1524, 1809, 2341, 2830
HapII CCGG 7 cut(s) 154, 405, 549, 1455, 2530, 2561, 3053
HgaI GACGC 2 cut(s) 36, 2780
HhaI GCGC 3 cut(s) 139, 2560, 2577
Hin1I GRCGYC 3 cut(s) 2427, 2558, 2581
Hin6I GCGC 3 cut(s) 137, 2558, 2575
HinP1I GCGC 3 cut(s) 137, 2558, 2575
HincII GTYRAC 3 cut(s) 444, 1171, 1696
HindII GTYRAC 3 cut(s) 444, 1171, 1696
HindIII AAGCTT 3 cut(s) 357, 1123, 2495
HinfI GANTC 9 cut(s) 615, 806, 816, 1334, 1417, 2170, 2399, 2704, 2725
HpaI GTTAAC 1 cut(s) 1696
HpaII CCGG 7 cut(s) 154, 405, 549, 1455, 2530, 2561, 3053
HphI GGTGA 4 cut(s) 394, 2150, 2808, 2860
Hpy166II GTNNAC 8 cut(s) 444, 614, 1171, 1366, 1373, 1508, 1696, 2108
Hpy8I GTNNAC 8 cut(s) 444, 614, 1171, 1366, 1373, 1508, 1696, 2108
HpyCH4IV ACGT 6 cut(s) 943, 1722, 2427, 2581, 2842, 2982
HpyF10VI GCNNNNNNNGC 9 cut(s) 34, 63, 72, 107, 175, 520, 1074, 1829, 2547
HpySE526I ACGT 6 cut(s) 943, 1722, 2427, 2581, 2842, 2982
Hsp92I GRCGYC 3 cut(s) 2427, 2558, 2581
HspAI GCGC 3 cut(s) 137, 2558, 2575
KasI GGCGCC 1 cut(s) 2557
Kpn2I TCCGGA 1 cut(s) 548
Ksp22I TGATCA 3 cut(s) 3, 388, 2299
KspAI GTTAAC 1 cut(s) 1696
LguI GCTCTTC 1 cut(s) 1862
LmnI GCTCC 4 cut(s) 493, 511, 3009, 3032
Lsp1109I GCAGC 7 cut(s) 62, 126, 1769, 1819, 2026, 2228, 2804
LweI GCATC 5 cut(s) 683, 924, 2162, 2228, 2443
MaeI CTAG 9 cut(s) 1502, 1613, 1745, 1991, 2072, 2222, 2450, 2778, 3024
MaeII ACGT 6 cut(s) 943, 1722, 2427, 2581, 2842, 2982
MflI RGATCY 6 cut(s) 958, 1840, 1984, 2631, 2668, 2740
MhlI GDGCHC 5 cut(s) 483, 842, 1375, 2528, 3014
Mly113I GGCGCC 1 cut(s) 2558
MlyI GAGTC 7 cut(s) 609, 1328, 1411, 2179, 2408, 2698, 2734
MmeI TCCRAC 1 cut(s) 2233
Mph1103I ATGCAT 2 cut(s) 203, 676
MroI TCCGGA 1 cut(s) 548
MroXI GAANNNNTTC 2 cut(s) 1664, 1986
MslI CAYNNNNRTG 2 cut(s) 656, 2885
MspA1I CMGCKG 4 cut(s) 75, 609, 1823, 2640
MspCI CTTAAG 2 cut(s) 506, 1442
MspI CCGG 7 cut(s) 154, 405, 549, 1455, 2530, 2561, 3053
MspR9I CCNGG 6 cut(s) 1209, 1526, 1860, 2410, 2530, 2531
Mva1269I GAATGC 1 cut(s) 419
MvaI CCWGG 4 cut(s) 1209, 1526, 1860, 2410
MvnI CGCG 1 cut(s) 2577
MwoI GCNNNNNNNGC 9 cut(s) 34, 63, 72, 107, 175, 520, 1074, 1829, 2547
NarI GGCGCC 1 cut(s) 2558
NciI CCSGG 2 cut(s) 2530, 2531
NcoI CCATGG 3 cut(s) 32, 96, 1133
NheI GCTAGC 1 cut(s) 3023
NlaIV GGNNCC 7 cut(s) 409, 481, 1649, 2002, 2559, 2670, 2742
NmuCI GTSAC 6 cut(s) 130, 263, 1729, 2838, 2848, 3061
NsiI ATGCAT 2 cut(s) 203, 676
NspI RCATGY 1 cut(s) 1782
PagI TCATGA 1 cut(s) 2392
PaqCI CACCTGC 1 cut(s) 1676
PciSI GCTCTTC 1 cut(s) 1862
PctI GAATGC 1 cut(s) 419
PdmI GAANNNNTTC 2 cut(s) 1664, 1986
PfeI GAWTC 2 cut(s) 806, 816
PflMI CCANNNNNTGG 3 cut(s) 203, 569, 2728
PfoI TCCNGGA 2 cut(s) 1207, 1858
PinAI ACCGGT 1 cut(s) 404
PkrI GCNGC 7 cut(s) 77, 141, 1784, 1834, 2041, 2243, 2794
PleI GAGTC 7 cut(s) 609, 1328, 1411, 2178, 2407, 2698, 2733
PluTI GGCGCC 1 cut(s) 2561
PmaCI CACGTG 1 cut(s) 2843
PmlI CACGTG 1 cut(s) 2843
PpsI GAGTC 7 cut(s) 609, 1328, 1411, 2178, 2407, 2698, 2733
Ppu21I YACGTR 1 cut(s) 2843
PpuMI RGGWCCY 1 cut(s) 2000
PshAI GACNNNNGTC 1 cut(s) 2724
PshBI ATTAAT 1 cut(s) 902
PsiI TTATAA 1 cut(s) 2100
Psp124BI GAGCTC 1 cut(s) 842
Psp1406I AACGTT 3 cut(s) 943, 1722, 2982
Psp5II RGGWCCY 1 cut(s) 2000
Psp6I CCWGG 4 cut(s) 1207, 1524, 1858, 2408
PspCI CACGTG 1 cut(s) 2843
PspEI GGTNACC 1 cut(s) 1138
PspFI CCCAGC 1 cut(s) 1348
PspGI CCWGG 4 cut(s) 1207, 1524, 1858, 2408
PspN4I GGNNCC 7 cut(s) 409, 481, 1649, 2002, 2559, 2670, 2742
PspOMI GGGCCC 1 cut(s) 479
PspPPI RGGWCCY 1 cut(s) 2000
PstNI CAGNNNCTG 2 cut(s) 1904, 2728
PsuI RGATCY 6 cut(s) 958, 1840, 1984, 2631, 2668, 2740
PvuII CAGCTG 3 cut(s) 75, 609, 1823
RsaI GTAC 4 cut(s) 271, 2107, 2234, 2418
RsaNI GTAC 4 cut(s) 270, 2106, 2233, 2417
RseI CAYNNNNRTG 2 cut(s) 656, 2885
SacI GAGCTC 1 cut(s) 842
SapI GCTCTTC 1 cut(s) 1862
SatI GCNGC 7 cut(s) 76, 140, 1783, 1833, 2040, 2242, 2793
SchI GAGTC 7 cut(s) 609, 1328, 1411, 2179, 2408, 2698, 2734
ScrFI CCNGG 6 cut(s) 1209, 1526, 1860, 2410, 2530, 2531
SduI GDGCHC 5 cut(s) 483, 842, 1375, 2528, 3014
SfaNI GCATC 5 cut(s) 683, 924, 2162, 2228, 2443
SfcI CTRYAG 2 cut(s) 1092, 2202
SfoI GGCGCC 1 cut(s) 2559
SinI GGWCC 7 cut(s) 407, 767, 1055, 1289, 1541, 2000, 2090
SmaI CCCGGG 1 cut(s) 2531
SmiMI CAYNNNNRTG 2 cut(s) 656, 2885
SmlI CTYRAG 2 cut(s) 506, 1442
SmoI CTYRAG 2 cut(s) 506, 1442
SsiI CCGC 6 cut(s) 1397, 1811, 1951, 2347, 2577, 2640
SspDI GGCGCC 1 cut(s) 2557
SspI AATATT 2 cut(s) 150, 2443
SspMI CTAG 9 cut(s) 1502, 1613, 1745, 1991, 2072, 2222, 2450, 2778, 3024
SstI GAGCTC 1 cut(s) 842
StyD4I CCNGG 6 cut(s) 1207, 1524, 1858, 2408, 2528, 2529
StyI CCWWGG 6 cut(s) 32, 96, 489, 1133, 1501, 2161
TaiI ACGT 6 cut(s) 946, 1725, 2430, 2584, 2845, 2985
TaqI TCGA 7 cut(s) 310, 1246, 1482, 1668, 1676, 2422, 2834
TatI WGTACW 2 cut(s) 269, 2416
TfiI GAWTC 2 cut(s) 806, 816
TscAI CASTG 4 cut(s) 826, 1375, 2887, 3085
TseFI GTSAC 6 cut(s) 130, 263, 1729, 2838, 2848, 3061
TseI GCWGC 7 cut(s) 75, 139, 1782, 1832, 2039, 2241, 2792
Tsp45I GTSAC 6 cut(s) 130, 263, 1729, 2838, 2848, 3061
TspGWI ACGGA 3 cut(s) 173, 907, 2250
TspMI CCCGGG 1 cut(s) 2529
TspRI CASTG 4 cut(s) 826, 1375, 2887, 3085
Van91I CCANNNNNTGG 3 cut(s) 203, 569, 2728
Vha464I CTTAAG 2 cut(s) 506, 1442
VneI GTGCAC 1 cut(s) 1371
VpaK11BI GGWCC 7 cut(s) 407, 767, 1055, 1289, 1541, 2000, 2090
VspI ATTAAT 1 cut(s) 902
XagI CCTNNNNNAGG 4 cut(s) 690, 1794, 2300, 2393
XapI RAATTY 6 cut(s) 350, 627, 862, 1159, 1231, 2650
XceI RCATGY 1 cut(s) 1782
XmaI CCCGGG 1 cut(s) 2529
XmaJI CCTAGG 1 cut(s) 1501
XmnI GAANNNNTTC 2 cut(s) 1664, 1986
XspI CTAG 9 cut(s) 1502, 1613, 1745, 1991, 2072, 2222, 2450, 2778, 3024
ZraI GACGTC 2 cut(s) 2428, 2582
Zsp2I ATGCAT 2 cut(s) 203, 676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.