Rroxscaffold_1G00053320
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
74154211 .. 74162976
8766 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00053320.1

Sequence Viewer

Length: 3003 bp
ATGGGTCATCTGCAAGTGAAAGCTTTGAATTCAATCTTTGCGCAATGGGGGATTGAGGCCAATGTGAAGCAGTGGAACACAACTGGAGACCCATGTAGTGGAGCTGCCATTGACTCCACCGCATTCGACGATGGCGATTACAACCCCTTCATCAAATGTGACTGTTCTGATAATGTCACTTGCCACATTACCCAACTGAAAGTTTATGCCTTGGATGTTGTTGGTGTACTTCCAGATGAGCTATGGACATTGAGCTACCTATTCAATCTTAATTTGGGTCAGAATTACTTGACAGGACCTCTCTCTGCTTCCATTGGAAATCTAACTGGCATGCAATACTTGAGCCTTGGCATTAATGCTTTATCGGGCGAGTTACCAAAGGAACTCGGAAATCTCACTGAATTGCTATCATTTGCTATTGGGACAAACAACTTTTCTGGTCCTCTGCCATCTGAACTAGGGAGTTTATCAAAATTACAACAACTTTACCTTGATAGTTCTGGAGTTAGCGGTGAGATTCCATCAACATTTGCTAATCTACAAAGCTTGCAGACACTTTGGGCATCAGATGTTGAACTCTCTGGTAGTATACCTGACTTCATAGGAAATTGGTCAAAGCTTACTTCCTTGAGGTTTCAAGGAAACTCCTTTGAAGGTCCTATACCATCTGCACTTTCCAATCTGACTTCTCTGACAGAGCTGTATATAACTGACATATCTACTACCAATGGGAGCTCTTCTCTTGGGTTTATTAAGGATATGAAGTCTCTATCTGTCTTAGTGCTAAGAAATAACAACATTTCTGATTCAATTCCTTCCAACATTGGAGAATACCAAAGTTTATCTCAGCTGGACTTGAGCTTCAACAATCTAACTGGACAAATACCAGACTCGCTGTTTAATTTGAGTTCTCTTTCCATCTTGTTTCTTGGAAACAATAAGTTGAATGGTACTCTACCTGAATCTAAAAGCTCATCTCTTCTCAATGTAGATTTATCATACAATAATCTAGTTGGGAGCATTCCTTCTTGGGTCAACGGAACGAATTTACAGCTTAATTTAGTTGCCAACAACTTCACCCTGGACAGTTCAAACAGCAGTGCTCTTCCTTCGGGGTTGAATTGCCTTCAAAGAGACTTTCCTTGCAACAGTGGGTCTGGAATTTATTATAACTTTGGGATCAAATGTGGGGGTCCTCAGATTACGTCTTCTAATAACATTGTGTATCAGACGGAAAATGAGACCCTTGGTCCAGCTACATATTTTGTGAATGACGAAAGCAGATGGGGAGTTAGCAATGTTGGGTATTTCACTGGAAGCAGCAATCCTCAGTACACAATTTTCTCCTCATCTCAATTCAAAAACACTCTAGATTCTGAGCTATTCCAGACTGCAAGGCTCTCTGCTTCATCACTTAGATATTATGGCTTGGGGCTTGAGAATGGTAACTACACAGTGAACCTACAGTTTGCTGAACAAGCTATCCTAGATTCTACTACATGGAAAAGTCTTGGGAGGCGCGTGTTTAATATTTATATCCAGGGAAATCTGGTTCTAAAGGATTTTGACATACGAAAGGAGGCAGGGGGATCTTTCCTAGCTGTTCAGAAGGAATACACGGCTCAGGTTTCTGAGAACTACCTTGAAATCCATCTCTTTTGGGCCGGAAAGGGGACTTGTTGTGTACCTGCGCAGGGTACTTATGGACCTATTATTTCAGCCATTAGTGCTACACCAGATTTCGAACCTTCTGTCAGTAACAATACTCCAACTAGTAAGAAGAATAGGACTGGGCTGATTGTGGGGATTGTTCTTGGTGGTGGAGTTTTAATTCTGGTGATGGTAGTTTTCTTCATTGTTCGAAGAAGAAAAAGGCCTGACTTCAATGATGTCGAAGAGCTGTTAGGGATTGATATTGGACCGCTCACTTTCAGTTATTCCGCACTGAAGTCGGCTACGAATGACTATAGTCCGGAAAACAAGCTTGGAGAGGGAGGATTTGGACCTGTCTACAAAGGTACCCTTAACGATGGAAGAGTAATTGCCGTGAAGCAATTGTCTGCAGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCCGTGCAACACAATAACCTAGTGACTTTGTATGGGTTCTGCACTGAGGGAGTTAAAAGGCTCCTTGTCTATGAGTATCTGGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAAGAAAAGTTTGAATCTTGATTGGTCAACACGATTTGACATATGCTTGGGAGTAGCTAGAGGTTTAACTTATCTTCATGAGGAATCAAGGCTTCGAATTGTACATAGAGATGTGAAGGCTAGTAATATTCTGCTCGACTCTAATCTTATCCCCAAGATATCAGATTTTGGTTTGGCCAAGCTTTATGACAATAAAATGACCCACATAAGTACTGGGGTTGCGGGAACAATAGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAAAAGACCGATGTGTTTGCATTTGGTGTTGTAGCTCTAGAGATTGTCAGTGGTAGGCCAAATTCTGACCCGAGTTTGGAAGAAGATAAGATGTATCTTCTGGAATGGGCTTGGAACTTGCATGAGAACAACCGTGAAGTCGAACTAGTGGACTACAGATTATCCGAATTCAATGAGGAAGAAGCAAAAAGAGTAATGAAGATAGGGCTTTTGTGCACTCAAACATCACCAATGCTGCGACCGACAATGTCTGGTGTTGTGGGAATGCTTACAGGAGCTATTGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACCGACTGGAAATTCAATGATGCAAGTAGTGCCAGCAACATAACACTTGGTATCTCGACTCAAGGAACTAATTCTAGCTTGTACAACTCATCGGCTAGTACAGGCATAGTAGGGGATGCAAGGCAAACACCTACAAATGACACTCATGCCATTCTTCACAATACTGTTAATGATGGTCGGTGA

Protein Analysis

1000

Amino Acids

108.82

Weight (kDa)

5.03

Isoelectric Point (pI)

33.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 102 - 212 4.1e-13 Leucine-rich repeat region
LRR_14 PF23598 152 - 258 6e-10 Leucine-rich repeat region
Malectin PF11721 392 - 575 5.9e-44 Malectin domain
Pkinase PF00069 656 - 918 1.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 659 - 921 3e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1170
Acc16I TGCGCA 2 cut(s) 42, 1692
Acc36I ACCTGC 1 cut(s) 1696
Acc65I GGTACC 1 cut(s) 2018
AccB1I GGYRCC 1 cut(s) 2018
AccB7I CCANNNNNTGG 1 cut(s) 98
AccBSI CCGCTC 1 cut(s) 1924
AccI GTMKAC 2 cut(s) 589, 2010
AccII CGCG 1 cut(s) 1521
AccIII TCCGGA 1 cut(s) 1972
AciI CCGC 5 cut(s) 120, 510, 1922, 1941, 2450
AclWI GGATC 2 cut(s) 1187, 1597
AcoI YGGCCR 1 cut(s) 2403
AcsI RAATTY 6 cut(s) 28, 1045, 1161, 2563, 2669, 2831
AcuI CTGAAG 1 cut(s) 1967
AfiI CCNNNNNNNGG 4 cut(s) 98, 1671, 1694, 2578
AhdI GACNNNNNGTC 1 cut(s) 1248
AhlI ACTAGT 2 cut(s) 1772, 2647
AjnI CCWGG 2 cut(s) 1080, 1539
AjuI GAANNNNNNNTTGG 2 cut(s) 1968, 2000
AloI GAACNNNNNNTCC 4 cut(s) 1467, 1499, 1536, 1568
Alw21I GWGCWC 3 cut(s) 737, 1105, 2720
Alw26I GTCTC 4 cut(s) 81, 771, 1128, 1235
Alw44I GTGCAC 1 cut(s) 2716
AlwI GGATC 2 cut(s) 1187, 1597
Ama87I CYCGRG 1 cut(s) 2572
Aor13HI TCCGGA 1 cut(s) 1972
AoxI GGCC 5 cut(s) 57, 1662, 1874, 2403, 2558
ApaLI GTGCAC 1 cut(s) 2716
ApeKI GCWGC 4 cut(s) 104, 1320, 2063, 2737
ApoI RAATTY 6 cut(s) 28, 1045, 1161, 2563, 2669, 2831
ArsI GACNNNNNNTTYG 2 cut(s) 1737, 1769
AseI ATTAAT 1 cut(s) 354
Asp700I GAANNNNTTC 1 cut(s) 2890
Asp718I GGTACC 1 cut(s) 2018
AspLEI GCGC 3 cut(s) 43, 1521, 1693
AspS9I GGNCC 9 cut(s) 296, 440, 656, 1193, 1250, 1662, 1706, 1919, 2003
AsuC2I CCSGG 1 cut(s) 2811
AsuHPI GGTGA 4 cut(s) 524, 1069, 1849, 2721
AsuII TTCGAA 3 cut(s) 1743, 1861, 2323
AvaI CYCGRG 1 cut(s) 2572
AvaII GGWCC 8 cut(s) 296, 440, 656, 1193, 1250, 1706, 1919, 2003
BaeGI GKGCMC 1 cut(s) 2720
BaeI ACNNNNGTAYC 2 cut(s) 2002, 2035
BalI TGGCCA 1 cut(s) 2405
BanI GGYRCC 1 cut(s) 2018
BanII GRGCYC 1 cut(s) 737
BarI GAAGNNNNNNTAC 2 cut(s) 645, 677
BbsI GAAGAC 1 cut(s) 1200
Bbv12I GWGCWC 3 cut(s) 737, 1105, 2720
BbvI GCAGC 4 cut(s) 91, 1332, 2075, 2724
BceAI ACGGC 3 cut(s) 1635, 2030, 2102
BcgI CGANNNNNNTGC 4 cut(s) 1932, 1966, 2501, 2535
BciT130I CCWGG 2 cut(s) 1082, 1541
BclI TGATCA 1 cut(s) 2212
BcnI CCSGG 1 cut(s) 2811
BcoDI GTCTC 4 cut(s) 81, 771, 1128, 1235
BcuI ACTAGT 2 cut(s) 1772, 2647
BfmI CTRYAG 4 cut(s) 1463, 1966, 2061, 2656
BfuAI ACCTGC 1 cut(s) 1696
BisI GCNGC 4 cut(s) 105, 1321, 2064, 2738
BlsI GCNGC 4 cut(s) 106, 1322, 2065, 2739
BmcAI AGTACT 1 cut(s) 2440
Bme1390I CCNGG 3 cut(s) 1082, 1541, 2811
Bme18I GGWCC 8 cut(s) 296, 440, 656, 1193, 1250, 1706, 1919, 2003
BmeRI GACNNNNNGTC 1 cut(s) 1248
BmeT110I CYCGRG 1 cut(s) 2572
BmgT120I GGNCC 9 cut(s) 296, 440, 656, 1193, 1250, 1662, 1706, 1919, 2003
BmiI GGNNCC 3 cut(s) 1194, 2020, 2177
BmrFI CCNGG 3 cut(s) 1082, 1541, 2811
BmrI ACTGGG 2 cut(s) 1800, 2451
BmsI GCATC 4 cut(s) 572, 2075, 2830, 2926
BmuI ACTGGG 2 cut(s) 1800, 2451
BoxI GACNNNNGTC 1 cut(s) 1968
BpiI GAAGAC 1 cut(s) 1200
BplI GAGNNNNNCTC 2 cut(s) 724, 756
BpmI CTGGAG 2 cut(s) 105, 522
Bpu10I CCTNAGC 1 cut(s) 1623
Bpu14I TTCGAA 3 cut(s) 1743, 1861, 2323
BpuEI CTTGAG 5 cut(s) 361, 649, 877, 1457, 2865
BpuMI CCSGG 1 cut(s) 2811
BsaI GGTCTC 2 cut(s) 81, 1235
BsaJI CCNNGG 6 cut(s) 210, 346, 1080, 1246, 1540, 2074
BsaWI WCCGGW 2 cut(s) 1972, 2473
Bsc4I CCNNNNNNNGG 4 cut(s) 98, 1671, 1694, 2578
Bse1I ACTGG 8 cut(s) 88, 331, 880, 1318, 1795, 2086, 2446, 2831
Bse3DI GCAATG 2 cut(s) 50, 1303
BseAI TCCGGA 1 cut(s) 1972
BseBI CCWGG 2 cut(s) 1082, 1541
BseDI CCNNGG 6 cut(s) 210, 346, 1080, 1246, 1540, 2074
BseGI GGATG 3 cut(s) 220, 2066, 2941
BseLI CCNNNNNNNGG 4 cut(s) 98, 1671, 1694, 2578
BseMI GCAATG 2 cut(s) 50, 1303
BseMII CTCAG 8 cut(s) 860, 1211, 1343, 1368, 1623, 1637, 2088, 2151
BseNI ACTGG 8 cut(s) 88, 331, 880, 1318, 1795, 2086, 2446, 2831
BseRI GAGGAG 1 cut(s) 1336
BseSI GKGCMC 1 cut(s) 2720
BseXI GCAGC 4 cut(s) 91, 1332, 2075, 2724
BsgI GTGCAG 2 cut(s) 654, 2140
Bsh1236I CGCG 1 cut(s) 1521
Bsh1285I CGRYCG 1 cut(s) 2744
BshFI GGCC 5 cut(s) 59, 1664, 1876, 2405, 2560
BshNI GGYRCC 1 cut(s) 2018
BsiEI CGRYCG 1 cut(s) 2744
BsiHKAI GWGCWC 3 cut(s) 737, 1105, 2720
BsiHKCI CYCGRG 1 cut(s) 2572
BsiSI CCGG 4 cut(s) 1665, 1973, 2474, 2811
BslFI GGGAC 2 cut(s) 436, 1687
BslI CCNNNNNNNGG 4 cut(s) 98, 1671, 1694, 2578
BsmAI GTCTC 4 cut(s) 81, 771, 1128, 1235
BsmFI GGGAC 2 cut(s) 436, 1687
BsmI GAATGC 3 cut(s) 122, 1020, 2772
BsnI GGCC 5 cut(s) 59, 1664, 1876, 2405, 2560
Bso31I GGTCTC 2 cut(s) 81, 1235
BsoBI CYCGRG 1 cut(s) 2572
Bsp119I TTCGAA 3 cut(s) 1743, 1861, 2323
Bsp1286I GDGCHC 3 cut(s) 737, 1105, 2720
Bsp13I TCCGGA 1 cut(s) 1972
Bsp1407I TGTACA 2 cut(s) 2329, 2901
Bsp143I GATC 3 cut(s) 1179, 1589, 2212
BspACI CCGC 5 cut(s) 120, 510, 1922, 1941, 2450
BspANI GGCC 5 cut(s) 59, 1664, 1876, 2405, 2560
BspCNI CTCAG 8 cut(s) 859, 1210, 1342, 1369, 1624, 1636, 2089, 2152
BspEI TCCGGA 1 cut(s) 1972
BspFNI CGCG 1 cut(s) 1521
BspHI TCATGA 1 cut(s) 2305
BspLI GGNNCC 3 cut(s) 1194, 2020, 2177
BspMAI CTGCAG 1 cut(s) 2065
BspMI ACCTGC 1 cut(s) 1696
BspPI GGATC 2 cut(s) 1187, 1597
BspQI GCTCTTC 3 cut(s) 742, 1110, 1890
BspT104I TTCGAA 3 cut(s) 1743, 1861, 2323
BspT107I GGYRCC 1 cut(s) 2018
BspTNI GGTCTC 2 cut(s) 81, 1235
BsrBI CCGCTC 1 cut(s) 1924
BsrDI GCAATG 2 cut(s) 50, 1303
BsrGI TGTACA 2 cut(s) 2329, 2901
BsrI ACTGG 8 cut(s) 88, 331, 880, 1318, 1795, 2086, 2446, 2831
BssECI CCNNGG 6 cut(s) 210, 346, 1080, 1246, 1540, 2074
BssMI GATC 3 cut(s) 1179, 1589, 2212
BssNAI GTATAC 1 cut(s) 590
BssT1I CCWWGG 4 cut(s) 210, 346, 1246, 2074
Bst1107I GTATAC 1 cut(s) 590
Bst2UI CCWGG 2 cut(s) 1082, 1541
Bst4CI ACNGT 8 cut(s) 164, 1088, 1151, 1456, 1467, 2636, 2797, 2986
Bst6I CTCTTC 5 cut(s) 742, 984, 1110, 1890, 2029
BstAPI GCANNNNNTGC 1 cut(s) 2849
BstAUI TGTACA 2 cut(s) 2329, 2901
BstBI TTCGAA 3 cut(s) 1743, 1861, 2323
BstC8I GCNNGC 3 cut(s) 332, 548, 2854
BstF5I GGATG 3 cut(s) 220, 2066, 2941
BstFNI CGCG 1 cut(s) 1521
BstHHI GCGC 3 cut(s) 43, 1521, 1693
BstKTI GATC 3 cut(s) 1182, 1592, 2215
BstMAI GTCTC 4 cut(s) 81, 771, 1128, 1235
BstMBI GATC 3 cut(s) 1179, 1589, 2212
BstMCI CGRYCG 1 cut(s) 2744
BstMWI GCNNNNNNNGC 3 cut(s) 1478, 1727, 2849
BstNI CCWGG 2 cut(s) 1082, 1541
BstNSI RCATGY 1 cut(s) 334
BstPAI GACNNNNGTC 1 cut(s) 1968
BstSCI CCNGG 3 cut(s) 1080, 1539, 2809
BstSFI CTRYAG 4 cut(s) 1463, 1966, 2061, 2656
BstSLI GKGCMC 1 cut(s) 2720
BstUI CGCG 1 cut(s) 1521
BstV1I GCAGC 4 cut(s) 91, 1332, 2075, 2724
BstV2I GAAGAC 1 cut(s) 1200
BstX2I RGATCY 1 cut(s) 1589
BstYI RGATCY 1 cut(s) 1589
BstZ17I GTATAC 1 cut(s) 590
BsuRI GGCC 5 cut(s) 59, 1664, 1876, 2405, 2560
BtsCI GGATG 3 cut(s) 220, 2066, 2941
BtsI GCAGTG 2 cut(s) 77, 1105
BtsIMutI CAGTG 9 cut(s) 77, 396, 1105, 1156, 1311, 1461, 1943, 2157, 2557
BveI ACCTGC 1 cut(s) 1696
Cac8I GCNNGC 3 cut(s) 332, 548, 2854
CciI TCATGA 1 cut(s) 2305
CfoI GCGC 3 cut(s) 43, 1521, 1693
Cfr13I GGNCC 9 cut(s) 296, 440, 656, 1193, 1250, 1662, 1706, 1919, 2003
CviAII CATG 7 cut(s) 93, 331, 1500, 2306, 2485, 2624, 2966
DpnI GATC 3 cut(s) 1181, 1591, 2214
DpnII GATC 3 cut(s) 1179, 1589, 2212
DriI GACNNNNNGTC 1 cut(s) 1248
EaeI YGGCCR 1 cut(s) 2403
Eam1104I CTCTTC 5 cut(s) 742, 984, 1110, 1890, 2029
Eam1105I GACNNNNNGTC 1 cut(s) 1248
EarI CTCTTC 5 cut(s) 742, 984, 1110, 1890, 2029
Ecl136II GAGCTC 1 cut(s) 735
Eco130I CCWWGG 4 cut(s) 210, 346, 1246, 2074
Eco147I AGGCCT 1 cut(s) 1876
Eco24I GRGCYC 1 cut(s) 737
Eco31I GGTCTC 2 cut(s) 81, 1235
Eco32I GATATC 1 cut(s) 2388
Eco47I GGWCC 8 cut(s) 296, 440, 656, 1193, 1250, 1706, 1919, 2003
Eco53kI GAGCTC 1 cut(s) 735
Eco57I CTGAAG 1 cut(s) 1967
Eco88I CYCGRG 1 cut(s) 2572
EcoICRI GAGCTC 1 cut(s) 735
EcoO109I RGGNCCY 3 cut(s) 296, 656, 1193
EcoRI GAATTC 2 cut(s) 28, 2669
EcoRII CCWGG 2 cut(s) 1080, 1539
EcoRV GATATC 1 cut(s) 2388
EcoT14I CCWWGG 4 cut(s) 210, 346, 1246, 2074
EcoT38I GRGCYC 1 cut(s) 737
ErhI CCWWGG 4 cut(s) 210, 346, 1246, 2074
FaeI CATG 7 cut(s) 96, 334, 1503, 2309, 2488, 2627, 2969
FalI AAGNNNNNCTT 2 cut(s) 2007, 2039
FaqI GGGAC 2 cut(s) 436, 1687
FatI CATG 7 cut(s) 92, 330, 1499, 2305, 2484, 2623, 2965
FauI CCCGC 1 cut(s) 2443
FauNDI CATATG 1 cut(s) 2270
FbaI TGATCA 1 cut(s) 2212
FblI GTMKAC 2 cut(s) 589, 2010
Fnu4HI GCNGC 4 cut(s) 105, 1321, 2064, 2738
FokI GGATG 3 cut(s) 227, 2053, 2948
FriOI GRGCYC 1 cut(s) 737
Fsp4HI GCNGC 4 cut(s) 105, 1321, 2064, 2738
FspI TGCGCA 2 cut(s) 42, 1692
GlaI GCGC 3 cut(s) 42, 1520, 1692
GluI GCNGC 4 cut(s) 105, 1321, 2064, 2738
GsuI CTGGAG 2 cut(s) 105, 522
HaeIII GGCC 5 cut(s) 59, 1664, 1876, 2405, 2560
HapII CCGG 4 cut(s) 1665, 1973, 2474, 2811
HhaI GCGC 3 cut(s) 43, 1521, 1693
Hin1II CATG 7 cut(s) 96, 334, 1503, 2309, 2488, 2627, 2969
Hin6I GCGC 3 cut(s) 41, 1519, 1691
HinP1I GCGC 3 cut(s) 41, 1519, 1691
HincII GTYRAC 2 cut(s) 1036, 2256
HindII GTYRAC 2 cut(s) 1036, 2256
HindIII AAGCTT 5 cut(s) 21, 544, 617, 1982, 2408
HpaII CCGG 4 cut(s) 1665, 1973, 2474, 2811
HphI GGTGA 4 cut(s) 524, 1069, 1849, 2721
Hpy99I CGWCG 1 cut(s) 131
HpyAV CCTTC 9 cut(s) 157, 647, 825, 1035, 1119, 1136, 1603, 1758, 2338
HpyCH4III ACNGT 8 cut(s) 164, 1088, 1151, 1456, 1467, 2636, 2797, 2986
HpyCH4IV ACGT 1 cut(s) 1205
HpyF10VI GCNNNNNNNGC 3 cut(s) 1478, 1727, 2849
HpySE526I ACGT 1 cut(s) 1205
Hsp92II CATG 7 cut(s) 96, 334, 1503, 2309, 2488, 2627, 2969
HspAI GCGC 3 cut(s) 41, 1519, 1691
Kpn2I TCCGGA 1 cut(s) 1972
KpnI GGTACC 1 cut(s) 2022
Ksp22I TGATCA 1 cut(s) 2212
Kzo9I GATC 3 cut(s) 1179, 1589, 2212
LguI GCTCTTC 3 cut(s) 742, 1110, 1890
LmnI GCTCC 5 cut(s) 101, 732, 1017, 2181, 2777
Lsp1109I GCAGC 4 cut(s) 91, 1332, 2075, 2724
LweI GCATC 4 cut(s) 572, 2075, 2830, 2926
MaeII ACGT 1 cut(s) 1205
MalI GATC 3 cut(s) 1181, 1591, 2214
MbiI CCGCTC 1 cut(s) 1924
MboI GATC 3 cut(s) 1179, 1589, 2212
MfeI CAATTG 1 cut(s) 2054
MflI RGATCY 1 cut(s) 1589
MhlI GDGCHC 3 cut(s) 737, 1105, 2720
MlsI TGGCCA 1 cut(s) 2405
MluNI TGGCCA 1 cut(s) 2405
MlyI GAGTC 5 cut(s) 107, 884, 2215, 2360, 2872
MmeI TCCRAC 2 cut(s) 843, 1793
Mox20I TGGCCA 1 cut(s) 2405
MroI TCCGGA 1 cut(s) 1972
MroXI GAANNNNTTC 1 cut(s) 2890
MscI TGGCCA 1 cut(s) 2405
MslI CAYNNNNRTG 1 cut(s) 2337
Msp20I TGGCCA 1 cut(s) 2405
MspA1I CMGCKG 1 cut(s) 850
MspI CCGG 4 cut(s) 1665, 1973, 2474, 2811
MspR9I CCNGG 3 cut(s) 1082, 1541, 2811
MunI CAATTG 1 cut(s) 2054
Mva1269I GAATGC 3 cut(s) 122, 1020, 2772
MvaI CCWGG 2 cut(s) 1082, 1541
MvnI CGCG 1 cut(s) 1521
MwoI GCNNNNNNNGC 3 cut(s) 1478, 1727, 2849
NciI CCSGG 1 cut(s) 2811
NdeI CATATG 1 cut(s) 2270
NdeII GATC 3 cut(s) 1179, 1589, 2212
NlaIII CATG 7 cut(s) 96, 334, 1503, 2309, 2488, 2627, 2969
NlaIV GGNNCC 3 cut(s) 1194, 2020, 2177
NmuCI GTSAC 4 cut(s) 158, 175, 2137, 2788
NsbI TGCGCA 2 cut(s) 42, 1692
NspI RCATGY 1 cut(s) 334
NspV TTCGAA 3 cut(s) 1743, 1861, 2323
PaeI GCATGC 1 cut(s) 334
PagI TCATGA 1 cut(s) 2305
PceI AGGCCT 1 cut(s) 1876
PciSI GCTCTTC 3 cut(s) 742, 1110, 1890
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PctI GAATGC 3 cut(s) 122, 1020, 2772
PdmI GAANNNNTTC 1 cut(s) 2890
PfeI GAWTC 7 cut(s) 517, 806, 962, 1373, 1490, 2242, 2312
PflFI GACNNNGTC 1 cut(s) 2749
PflMI CCANNNNNTGG 1 cut(s) 98
PkrI GCNGC 4 cut(s) 106, 1322, 2065, 2739
PleI GAGTC 5 cut(s) 107, 884, 2214, 2360, 2872
PpsI GAGTC 5 cut(s) 107, 884, 2214, 2360, 2872
PpuMI RGGWCCY 3 cut(s) 296, 656, 1193
PshAI GACNNNNGTC 1 cut(s) 1968
PshBI ATTAAT 1 cut(s) 354
PsiI TTATAA 1 cut(s) 1170
Psp124BI GAGCTC 1 cut(s) 737
Psp5II RGGWCCY 3 cut(s) 296, 656, 1193
Psp6I CCWGG 2 cut(s) 1080, 1539
PspGI CCWGG 2 cut(s) 1080, 1539
PspN4I GGNNCC 3 cut(s) 1194, 2020, 2177
PspPI GGNCC 9 cut(s) 296, 440, 656, 1193, 1250, 1662, 1706, 1919, 2003
PspPPI RGGWCCY 3 cut(s) 296, 656, 1193
PstI CTGCAG 1 cut(s) 2065
PsuI RGATCY 1 cut(s) 1589
PsyI GACNNNGTC 1 cut(s) 2749
PvuII CAGCTG 1 cut(s) 850
RseI CAYNNNNRTG 1 cut(s) 2337
SacI GAGCTC 1 cut(s) 737
SapI GCTCTTC 3 cut(s) 742, 1110, 1890
SatI GCNGC 4 cut(s) 105, 1321, 2064, 2738
Sau3AI GATC 3 cut(s) 1179, 1589, 2212
Sau96I GGNCC 9 cut(s) 296, 440, 656, 1193, 1250, 1662, 1706, 1919, 2003
ScaI AGTACT 1 cut(s) 2440
SchI GAGTC 5 cut(s) 107, 884, 2215, 2360, 2872
ScrFI CCNGG 3 cut(s) 1082, 1541, 2811
SduI GDGCHC 3 cut(s) 737, 1105, 2720
SfaNI GCATC 4 cut(s) 572, 2075, 2830, 2926
SfcI CTRYAG 4 cut(s) 1463, 1966, 2061, 2656
SfuI TTCGAA 3 cut(s) 1743, 1861, 2323
SinI GGWCC 8 cut(s) 296, 440, 656, 1193, 1250, 1706, 1919, 2003
SmiMI CAYNNNNRTG 1 cut(s) 2337
SmlI CTYRAG 5 cut(s) 340, 628, 856, 1436, 2880
SmoI CTYRAG 5 cut(s) 340, 628, 856, 1436, 2880
SpeI ACTAGT 2 cut(s) 1772, 2647
SphI GCATGC 1 cut(s) 334
SseBI AGGCCT 1 cut(s) 1876
SsiI CCGC 5 cut(s) 120, 510, 1922, 1941, 2450
SspI AATATT 2 cut(s) 1531, 2356
SstI GAGCTC 1 cut(s) 737
StuI AGGCCT 1 cut(s) 1876
StyD4I CCNGG 3 cut(s) 1080, 1539, 2809
StyI CCWWGG 4 cut(s) 210, 346, 1246, 2074
TaaI ACNGT 8 cut(s) 164, 1088, 1151, 1456, 1467, 2636, 2797, 2986
TaiI ACGT 1 cut(s) 1208
TaqI TCGA 8 cut(s) 126, 1743, 1861, 1893, 2323, 2364, 2643, 2876
TaqII GACCGA 3 cut(s) 2525, 2758, 2837
TatI WGTACW 6 cut(s) 226, 1332, 2329, 2438, 2901, 2918
TfiI GAWTC 7 cut(s) 517, 806, 962, 1373, 1490, 2242, 2312
TscAI CASTG 9 cut(s) 77, 403, 1105, 1156, 1318, 1461, 1950, 2164, 2557
TseFI GTSAC 4 cut(s) 158, 175, 2137, 2788
TseI GCWGC 4 cut(s) 104, 1320, 2063, 2737
Tsp45I GTSAC 4 cut(s) 158, 175, 2137, 2788
TspDTI ATGAA 7 cut(s) 139, 589, 776, 1398, 1843, 2294, 2714
TspGWI ACGGA 2 cut(s) 1053, 1247
TspRI CASTG 9 cut(s) 77, 403, 1105, 1156, 1318, 1461, 1950, 2164, 2557
Tth111I GACNNNGTC 1 cut(s) 2749
Van91I CCANNNNNTGG 1 cut(s) 98
VneI GTGCAC 1 cut(s) 2716
VpaK11BI GGWCC 8 cut(s) 296, 440, 656, 1193, 1250, 1706, 1919, 2003
VspI ATTAAT 1 cut(s) 354
XapI RAATTY 6 cut(s) 28, 1045, 1161, 2563, 2669, 2831
XbaI TCTAGA 2 cut(s) 1369, 2539
XceI RCATGY 1 cut(s) 334
XcmI CCANNNNNNNNNTGG 2 cut(s) 240, 2438
XmiI GTMKAC 2 cut(s) 589, 2010
XmnI GAANNNNTTC 1 cut(s) 2890
ZrmI AGTACT 1 cut(s) 2440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.