Rroxscaffold_1G00073840

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
94576367 .. 94584700
8334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00073840.1

Sequence Viewer

Length: 2793 bp
ATGAAGCATTCTTCTCTTTCATTACTATGCTTCTGCCTATGCTATCTGATCAGTTCCTTCTGGTTTCACGTTTCCATGGCTCAAAATGCAACAAATGCTACCACGGACCCATCTGAAGTGTCGGCTTTGAACTCGATCTTCCAACAGTGGGGAGCGCAGTCAGTGGCGCTGTGGAATATCAGTGGAGAGCCATGCAGTGGATCAGCCATCAATGGAACTGAATTTGAGAGTGGCCCAAATAACCCGGCCATTATATGTGATTGTACCTTTGACAATGGTACCACCTGCCATATAACCCAACTGAAAATAGATCAGAACTTTTTCACAGGTCCCTTACCCGCATGGATTGGCAATATGTCTGCATTGACGTTGTTGTCAATTGCCCACAATGCGTTCTCTGGGCCAATCCCCAAGGAACTTGGAAATCTGAAGGACCTGAATATGCTTTGGGCATCAGACACTCCTTTCTCCGGAAAGATACCTGATTTCATTGGGAATTGGACGAAGCTAAACTCACTAGTTCTACGAAATGCATTGATTACTGGTAGCCTCCCTTCTGATATTGCAGAATATCCAAGTTTACAGATACTGGATTTGAGTTTCAACAATTTGACAGGCCAACTCCCAGATGCTTTGTTCAACATGAGTTCTCTTACATACTTAGACTTGTCTTACAACTATTTGTCAGGGAGTCTTCCTCCATGGGTAACCTCAACAGCGCAACTTCTTCCTGGGTTGAATTGCCTTCAGAGAAATTTTCCATGCAATAGAAATACCCCACGATATGCAAACTTTTCAATCAAGTGTGGTGGACCAGAACTTAGAGGAAGTGATGGTATGGTGTATGAGGGAGAAAACTCAACTCTTGGCCCAGCAACATTTAGTGTAACCAGTACAGAGAAATGGGCGGTAAGCAATGTGGGTATGTTTGCTGACAGAAAGAATCCAGACTATGTTGTGAATACCCTGGCACAAGTCACTGGGACAGATGTGACCCCAGAGCTTTTCCAGACCTCAAGATTGTCTCCCGGATCGTTGAGGTACTTCGGCTTGGGTCTGGAGAATGGGCCTTATACTGTAACATTGCAATTTGCAGAAACGGGGGATCTAAAATGGAAGGACTTTGACATCTCGAAGGAGGCAGGTGGAGTTTTCAGAGCTGTTGCTAGAAACTTCAATGTTAATGTGTCAGAAAATTATCTTGACATTCATCTGTTCTGGGCTGGTAAGGGGGACCTGCTGCATACCCGAACAAGGTCATTACGGCCCTCTAATATCAGCGAATTTACTCCAACTGTTTCTGGGATTCCACCAACTACTCCGGGAAAGAAGAGCAACACAGGACTGATAGTTGGTATTGCAGTTCCTCTTGGAGTTGTGGGCTTGCTGTTAGTATTTTCAGTTCTATATTTGAGGAGGAAAAAAGCAGAAAAATATGATGATGAAGACCTTCTAGCACTAGAGAACAGACCAAATACATTTAGTTATTCTGAGTTGAAAGAAGCAACAGAAGATTTTAATCCTTCAAATAAGCTAGGAGAAGGAGGATATGGCCCTGTTTACAAGGGTACACTTTCTGATGGGAGGGTAGTGGCTGTGAAGCAACTTTCAGTGGCATCTCACCAAGGGAAGAGTCAATTTGCTGCAGAAATTGCTACTATATCTGCAGTGCAACATCGCAATCTAGTGAAATTGTATGGATGCTGTATCGAAGGAAGCCAGCGAATTTTGGTTTATGAATATCTTGAAAACAAGAGCCTTGATCAAGCACTTTTTGGAATAAATGACCTGCACCTTGACTGGCTTACCCGCTTCAATATAATGTTGGGAACAGCAAGAGGACTTGCTTATCTTCATGAGGAGTCAAGCCCAAGGATTGTGCATAGAGATGTCAAAGCCAGTAATATTTTGCTCGACGCAGAACTCTGCCCAAAAATATCAGATTTTGGATTAGCAAAGCTATATGATGATGACAAAACCCATATCAGTACCCGAGTTGCAGGGACAATAGGCTATTTGGCACCAGAGTATGCAATGCGTGGACATCTGACTGAGAAGGCTGATGTTTTCAGTTTTGGGGTTGTTGTTTTGGAGATTCTCAGTGGAAGACCAAATGCTGACAGTGATTTGGATGCTGGAAAGACTTATCTCCTTGAATGGGCTTGGACTCTACATGAAAATAACAAGACTTTGGAGTTGGTGGATCCCAGATTGACAGATTTTGATGATCAAGAAGCCATTAGGTTCATAAAAGTAGCTTTCCAATGCACACAGGGACCGCCAATGACGCGGCCATCTATGTCACGCGTGGTTGGCATGCTTTCTGGAGATATTGAAGTAGGCAGCACTGTCATGTCAAAGCCAAGTTATTTGACGGATTGGGACTATAAAGATGTAACAACAAGTAGCTTTTTGATTGATCGCGATACACCATCAACTGATAGTAAGAGTGAGCTCAACCTTCAGCCTGGCAGCACAACTCGTGCTAGCACCGATATTGACCTTGCGCCATCTCCTGTGGAGGCTAATCGATCAATGGTCACTGACATTATAAGAGAAGGAAGGAACACCGGCTTCTGCAAAAGCATGGTGAAAGAACACATTACTATCATGACTAAGGCCACTGATGGAAATTCCAACAACAACAAGATGAAGAATATTATTGAAGATGATGAAGACTCTCTCTCTCTGTCTCTCTCTTTGTCTCCCTCTCCCCCTCCCCCTAATCCTCCAAAGAACCCATTACTCTTTCAATCTTTGCTCTCTAAAGAAACCCCAGATTACGGGTTTTGA

Protein Analysis

930

Amino Acids

102.07

Weight (kDa)

5.18

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 169 - 228 2.5e-08 Leucine rich repeat
Malectin PF11721 265 - 413 1.1e-16 Malectin domain
Pkinase PF00069 508 - 770 5.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 509 - 771 2.4e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2552
AarI CACCTGC 2 cut(s) 293, 1133
AasI GACNNNNNNGTC 1 cut(s) 373
Acc36I ACCTGC 4 cut(s) 293, 1133, 1245, 1797
Acc65I GGTACC 1 cut(s) 278
AccB1I GGYRCC 2 cut(s) 278, 2020
AccB7I CCANNNNNTGG 1 cut(s) 197
AccII CGCG 3 cut(s) 2290, 2307, 2424
AccIII TCCGGA 1 cut(s) 470
AciI CCGC 5 cut(s) 339, 908, 1810, 2279, 2290
AclWI GGATC 5 cut(s) 208, 1039, 1113, 2198, 2211
AcoI YGGCCR 2 cut(s) 246, 2291
AcsI RAATTY 5 cut(s) 221, 754, 1283, 1725, 2632
AcuI CTGAAG 4 cut(s) 135, 449, 731, 2447
AfaI GTAC 6 cut(s) 265, 280, 895, 1043, 1570, 1990
AfiI CCNNNNNNNGG 6 cut(s) 148, 197, 470, 1254, 2158, 2783
AflIII ACRYGT 1 cut(s) 2305
AhlI ACTAGT 1 cut(s) 517
AjnI CCWGG 3 cut(s) 730, 966, 2467
AluBI AGCT 8 cut(s) 508, 1003, 1160, 1534, 1960, 2258, 2409, 2455
AluI AGCT 8 cut(s) 508, 1003, 1160, 1534, 1960, 2258, 2409, 2455
Alw21I GWGCWC 1 cut(s) 2457
Alw26I GTCTC 3 cut(s) 1029, 2697, 2709
AlwI GGATC 5 cut(s) 208, 1039, 1113, 2198, 2211
AlwNI CAGNNNCTG 1 cut(s) 589
Ama87I CYCGRG 1 cut(s) 1992
Aor13HI TCCGGA 1 cut(s) 470
ApeKI GCWGC 4 cut(s) 1240, 1643, 2343, 2472
ApoI RAATTY 5 cut(s) 221, 754, 1283, 1725, 2632
Asp700I GAANNNNTTC 2 cut(s) 320, 1449
Asp718I GGTACC 1 cut(s) 278
AspLEI GCGC 4 cut(s) 157, 169, 721, 2509
AsuC2I CCSGG 3 cut(s) 245, 1029, 1323
AsuHPI GGTGA 2 cut(s) 1613, 2602
AsuNHI GCTAGC 1 cut(s) 2486
AvaI CYCGRG 1 cut(s) 1992
AvaII GGWCC 6 cut(s) 106, 329, 433, 812, 1234, 2276
BaeI ACNNNNGTAYC 2 cut(s) 262, 295
BamHI GGATCC 1 cut(s) 2203
BanI GGYRCC 2 cut(s) 278, 2020
BanII GRGCYC 1 cut(s) 2457
BarI GAAGNNNNNNTAC 2 cut(s) 538, 570
BauI CACGAG 1 cut(s) 2481
BbsI GAAGAC 4 cut(s) 686, 1452, 2113, 2682
Bbv12I GWGCWC 1 cut(s) 2457
BbvI GCAGC 4 cut(s) 1227, 1630, 2355, 2484
BccI CCATC 8 cut(s) 118, 215, 827, 1574, 2302, 2440, 2518, 2621
BceAI ACGGC 1 cut(s) 1280
BciT130I CCWGG 3 cut(s) 732, 968, 2469
BclI TGATCA 3 cut(s) 48, 1762, 2227
BcnI CCSGG 3 cut(s) 245, 1029, 1323
BcoDI GTCTC 3 cut(s) 1029, 2697, 2709
BcuI ACTAGT 1 cut(s) 517
BfaI CTAG 7 cut(s) 518, 1167, 1454, 1460, 1535, 1685, 2487
BfmI CTRYAG 2 cut(s) 1644, 1665
BfoI RGCGCY 1 cut(s) 170
BfuAI ACCTGC 4 cut(s) 293, 1133, 1245, 1797
BisI GCNGC 5 cut(s) 1241, 1644, 2291, 2344, 2473
BlsI GCNGC 5 cut(s) 1242, 1645, 2292, 2345, 2474
Bme1390I CCNGG 6 cut(s) 245, 732, 968, 1029, 1323, 2469
Bme18I GGWCC 6 cut(s) 106, 329, 433, 812, 1234, 2276
BmeT110I CYCGRG 1 cut(s) 1992
BmiI GGNNCC 7 cut(s) 108, 280, 331, 1235, 2022, 2205, 2277
BmrFI CCNGG 6 cut(s) 245, 732, 968, 1029, 1323, 2469
BmrI ACTGGG 1 cut(s) 990
BmsI GCATC 5 cut(s) 461, 619, 1625, 1691, 2122
BmtI GCTAGC 1 cut(s) 2490
BmuI ACTGGG 1 cut(s) 990
BpiI GAAGAC 4 cut(s) 686, 1452, 2113, 2682
BplI GAGNNNNNCTC 2 cut(s) 682, 714
BpmI CTGGAG 2 cut(s) 1079, 2346
BpuEI CTTGAG 1 cut(s) 1000
BpuMI CCSGG 3 cut(s) 245, 1029, 1323
Bsa29I ATCGAT 1 cut(s) 2530
BsaBI GATNNNNATC 1 cut(s) 1518
BsaJI CCNNGG 8 cut(s) 75, 102, 411, 701, 731, 966, 1624, 1871
BsaWI WCCGGW 1 cut(s) 470
Bsc4I CCNNNNNNNGG 6 cut(s) 148, 197, 470, 1254, 2158, 2783
Bse118I RCCGGY 1 cut(s) 2570
Bse1I ACTGG 6 cut(s) 547, 594, 891, 985, 1805, 1899
Bse3DI GCAATG 3 cut(s) 922, 1082, 2040
Bse8I GATNNNNATC 1 cut(s) 1518
BseAI TCCGGA 1 cut(s) 470
BseBI CCWGG 3 cut(s) 732, 968, 2469
BseCI ATCGAT 1 cut(s) 2530
BseDI CCNNGG 8 cut(s) 75, 102, 411, 701, 731, 966, 1624, 1871
BseGI GGATG 2 cut(s) 1706, 2137
BseJI GATNNNNATC 1 cut(s) 1518
BseLI CCNNNNNNNGG 6 cut(s) 148, 197, 470, 1254, 2158, 2783
BseMI GCAATG 3 cut(s) 922, 1082, 2040
BseMII CTCAG 3 cut(s) 1482, 2043, 2113
BseNI ACTGG 6 cut(s) 547, 594, 891, 985, 1805, 1899
BseRI GAGGAG 2 cut(s) 1429, 1874
BseXI GCAGC 4 cut(s) 1227, 1630, 2355, 2484
BseYI CCCAGC 1 cut(s) 871
BsgI GTGCAG 1 cut(s) 1775
Bsh1236I CGCG 3 cut(s) 2290, 2307, 2424
BshNI GGYRCC 2 cut(s) 278, 2020
BshVI ATCGAT 1 cut(s) 2530
BsiHKAI GWGCWC 1 cut(s) 2457
BsiHKCI CYCGRG 1 cut(s) 1992
BsiSI CCGG 5 cut(s) 245, 471, 1029, 1322, 2571
BslFI GGGAC 6 cut(s) 315, 997, 1247, 2017, 2289, 2396
BslI CCNNNNNNNGG 6 cut(s) 148, 197, 470, 1254, 2158, 2783
BsmAI GTCTC 3 cut(s) 1029, 2697, 2709
BsmFI GGGAC 6 cut(s) 315, 997, 1247, 2017, 2289, 2396
BsmI GAATGC 1 cut(s) 7
BsoBI CYCGRG 1 cut(s) 1992
Bsp1286I GDGCHC 1 cut(s) 2457
Bsp13I TCCGGA 1 cut(s) 470
Bsp19I CCATGG 2 cut(s) 75, 701
Bsp68I TCGCGA 1 cut(s) 2424
BspACI CCGC 5 cut(s) 339, 908, 1810, 2279, 2290
BspCNI CTCAG 3 cut(s) 1483, 2044, 2112
BspDI ATCGAT 1 cut(s) 2530
BspEI TCCGGA 1 cut(s) 470
BspFNI CGCG 3 cut(s) 2290, 2307, 2424
BspHI TCATGA 2 cut(s) 1855, 2610
BspLI GGNNCC 7 cut(s) 108, 280, 331, 1235, 2022, 2205, 2277
BspMAI CTGCAG 2 cut(s) 1648, 1669
BspMI ACCTGC 4 cut(s) 293, 1133, 1245, 1797
BspOI GCTAGC 1 cut(s) 2490
BspPI GGATC 5 cut(s) 208, 1039, 1113, 2198, 2211
BspQI GCTCTTC 1 cut(s) 1325
BspT107I GGYRCC 2 cut(s) 278, 2020
BsrDI GCAATG 3 cut(s) 922, 1082, 2040
BsrFI RCCGGY 1 cut(s) 2570
BsrI ACTGG 6 cut(s) 547, 594, 891, 985, 1805, 1899
BssAI RCCGGY 1 cut(s) 2570
BssECI CCNNGG 8 cut(s) 75, 102, 411, 701, 731, 966, 1624, 1871
BssSI CACGAG 1 cut(s) 2481
BssT1I CCWWGG 5 cut(s) 75, 411, 701, 1624, 1871
Bst2BI CACGAG 1 cut(s) 2481
Bst2UI CCWGG 3 cut(s) 732, 968, 2469
Bst4CI ACNGT 5 cut(s) 147, 1078, 1297, 2123, 2350
Bst6I CTCTTC 2 cut(s) 1325, 1625
BstAPI GCANNNNNTGC 2 cut(s) 95, 1652
BstC8I GCNNGC 4 cut(s) 1385, 1721, 2318, 2488
BstDEI CTNAG 6 cut(s) 661, 821, 1491, 2052, 2099, 2616
BstDSI CCRYGG 3 cut(s) 75, 102, 701
BstEII GGTNACC 1 cut(s) 706
BstF5I GGATG 2 cut(s) 1706, 2137
BstFNI CGCG 3 cut(s) 2290, 2307, 2424
BstH2I RGCGCY 1 cut(s) 170
BstHHI GCGC 4 cut(s) 157, 169, 721, 2509
BstMAI GTCTC 3 cut(s) 1029, 2697, 2709
BstMWI GCNNNNNNNGC 6 cut(s) 86, 95, 389, 1652, 2287, 2313
BstNI CCWGG 3 cut(s) 732, 968, 2469
BstNSI RCATGY 1 cut(s) 2320
BstPI GGTNACC 1 cut(s) 706
BstSCI CCNGG 6 cut(s) 243, 730, 966, 1027, 1321, 2467
BstSFI CTRYAG 2 cut(s) 1644, 1665
BstUI CGCG 3 cut(s) 2290, 2307, 2424
BstV1I GCAGC 4 cut(s) 1227, 1630, 2355, 2484
BstV2I GAAGAC 4 cut(s) 686, 1452, 2113, 2682
BstX2I RGATCY 2 cut(s) 1105, 2203
BstYI RGATCY 2 cut(s) 1105, 2203
Bsu15I ATCGAT 1 cut(s) 2530
BsuTUI ATCGAT 1 cut(s) 2530
BtgI CCRYGG 3 cut(s) 75, 102, 701
BtgZI GCGATG 1 cut(s) 1661
BtsCI GGATG 2 cut(s) 1706, 2137
BtsI GCAGTG 2 cut(s) 202, 1674
BtuMI TCGCGA 1 cut(s) 2424
BveI ACCTGC 4 cut(s) 293, 1133, 1245, 1797
Cac8I GCNNGC 4 cut(s) 1385, 1721, 2318, 2488
CaiI CAGNNNCTG 1 cut(s) 589
CciI TCATGA 2 cut(s) 1855, 2610
CfoI GCGC 4 cut(s) 157, 169, 721, 2509
Cfr10I RCCGGY 1 cut(s) 2570
ClaI ATCGAT 1 cut(s) 2530
CseI GACGC 2 cut(s) 1925, 2296
Csp6I GTAC 6 cut(s) 264, 279, 894, 1042, 1569, 1989
CspCI CAANNNNNGTGG 2 cut(s) 790, 825
CviQI GTAC 6 cut(s) 264, 279, 894, 1042, 1569, 1989
DdeI CTNAG 6 cut(s) 661, 821, 1491, 2052, 2099, 2616
DrdI GACNNNNNNGTC 1 cut(s) 373
DseDI GACNNNNNNGTC 1 cut(s) 373
EaeI YGGCCR 2 cut(s) 246, 2291
Eam1104I CTCTTC 2 cut(s) 1325, 1625
EarI CTCTTC 2 cut(s) 1325, 1625
Ecl136II GAGCTC 1 cut(s) 2455
Eco130I CCWWGG 5 cut(s) 75, 411, 701, 1624, 1871
Eco24I GRGCYC 1 cut(s) 2457
Eco47I GGWCC 6 cut(s) 106, 329, 433, 812, 1234, 2276
Eco53kI GAGCTC 1 cut(s) 2455
Eco57I CTGAAG 4 cut(s) 135, 449, 731, 2447
Eco88I CYCGRG 1 cut(s) 1992
Eco91I GGTNACC 1 cut(s) 706
EcoICRI GAGCTC 1 cut(s) 2455
EcoO109I RGGNCCY 3 cut(s) 329, 433, 1234
EcoO65I GGTNACC 1 cut(s) 706
EcoRII CCWGG 3 cut(s) 730, 966, 2467
EcoT14I CCWWGG 5 cut(s) 75, 411, 701, 1624, 1871
EcoT22I ATGCAT 1 cut(s) 535
EcoT38I GRGCYC 1 cut(s) 2457
ErhI CCWWGG 5 cut(s) 75, 411, 701, 1624, 1871
FaqI GGGAC 6 cut(s) 315, 997, 1247, 2017, 2289, 2396
FauI CCCGC 2 cut(s) 346, 1817
FbaI TGATCA 3 cut(s) 48, 1762, 2227
Fnu4HI GCNGC 5 cut(s) 1241, 1644, 2291, 2344, 2473
FokI GGATG 2 cut(s) 1713, 2144
FriOI GRGCYC 1 cut(s) 2457
Fsp4HI GCNGC 5 cut(s) 1241, 1644, 2291, 2344, 2473
FspBI CTAG 7 cut(s) 518, 1167, 1454, 1460, 1535, 1685, 2487
GlaI GCGC 4 cut(s) 156, 168, 720, 2508
GluI GCNGC 5 cut(s) 1241, 1644, 2291, 2344, 2473
GsaI CCCAGC 1 cut(s) 875
GsuI CTGGAG 2 cut(s) 1079, 2346
HaeII RGCGCY 1 cut(s) 170
HapII CCGG 5 cut(s) 245, 471, 1029, 1322, 2571
HgaI GACGC 2 cut(s) 1925, 2296
HhaI GCGC 4 cut(s) 157, 169, 721, 2509
Hin6I GCGC 4 cut(s) 155, 167, 719, 2507
HinP1I GCGC 4 cut(s) 155, 167, 719, 2507
HinfI GANTC 8 cut(s) 691, 943, 1306, 1633, 1862, 2095, 2167, 2678
HpaII CCGG 5 cut(s) 245, 471, 1029, 1322, 2571
HphI GGTGA 2 cut(s) 1613, 2602
Hpy166II GTNNAC 5 cut(s) 581, 812, 1561, 1571, 2042
Hpy8I GTNNAC 5 cut(s) 581, 812, 1561, 1571, 2042
Hpy99I CGWCG 1 cut(s) 1919
HpyCH4III ACNGT 5 cut(s) 147, 1078, 1297, 2123, 2350
HpyCH4IV ACGT 2 cut(s) 69, 368
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 95, 389, 1652, 2287, 2313
HpyF3I CTNAG 6 cut(s) 661, 821, 1491, 2052, 2099, 2616
HpySE526I ACGT 2 cut(s) 69, 368
HspAI GCGC 4 cut(s) 155, 167, 719, 2507
Kpn2I TCCGGA 1 cut(s) 470
KpnI GGTACC 1 cut(s) 282
Ksp22I TGATCA 3 cut(s) 48, 1762, 2227
LguI GCTCTTC 1 cut(s) 1325
LmnI GCTCC 1 cut(s) 152
Lsp1109I GCAGC 4 cut(s) 1227, 1630, 2355, 2484
LweI GCATC 5 cut(s) 461, 619, 1625, 1691, 2122
MaeI CTAG 7 cut(s) 518, 1167, 1454, 1460, 1535, 1685, 2487
MaeII ACGT 2 cut(s) 69, 368
MaeIII GTNAC 8 cut(s) 706, 886, 976, 991, 1078, 2301, 2395, 2539
MfeI CAATTG 1 cut(s) 378
MflI RGATCY 2 cut(s) 1105, 2203
MhlI GDGCHC 1 cut(s) 2457
MluI ACGCGT 1 cut(s) 2305
MlyI GAGTC 5 cut(s) 700, 1642, 1871, 2161, 2672
MmeI TCCRAC 3 cut(s) 166, 1316, 2661
Mph1103I ATGCAT 1 cut(s) 535
MroI TCCGGA 1 cut(s) 470
MroXI GAANNNNTTC 2 cut(s) 320, 1449
MseI TTAA 2 cut(s) 1182, 1518
MslI CAYNNNNRTG 3 cut(s) 25, 1887, 2351
MspI CCGG 5 cut(s) 245, 471, 1029, 1322, 2571
MspR9I CCNGG 6 cut(s) 245, 732, 968, 1029, 1323, 2469
MunI CAATTG 1 cut(s) 378
Mva1269I GAATGC 1 cut(s) 7
MvaI CCWGG 3 cut(s) 732, 968, 2469
MvnI CGCG 3 cut(s) 2290, 2307, 2424
MwoI GCNNNNNNNGC 6 cut(s) 86, 95, 389, 1652, 2287, 2313
NciI CCSGG 3 cut(s) 245, 1029, 1323
NcoI CCATGG 2 cut(s) 75, 701
NheI GCTAGC 1 cut(s) 2486
NlaIV GGNNCC 7 cut(s) 108, 280, 331, 1235, 2022, 2205, 2277
NmuCI GTSAC 4 cut(s) 976, 991, 2301, 2539
NruI TCGCGA 1 cut(s) 2424
NsiI ATGCAT 1 cut(s) 535
NspI RCATGY 1 cut(s) 2320
PaeI GCATGC 1 cut(s) 2320
PagI TCATGA 2 cut(s) 1855, 2610
PaqCI CACCTGC 2 cut(s) 293, 1133
PciSI GCTCTTC 1 cut(s) 1325
PctI GAATGC 1 cut(s) 7
PdmI GAANNNNTTC 2 cut(s) 320, 1449
PfeI GAWTC 3 cut(s) 943, 1306, 2095
PflMI CCANNNNNTGG 1 cut(s) 197
PfoI TCCNGGA 2 cut(s) 1027, 1321
PkrI GCNGC 5 cut(s) 1242, 1645, 2292, 2345, 2474
PleI GAGTC 5 cut(s) 699, 1641, 1870, 2161, 2672
PpsI GAGTC 5 cut(s) 699, 1641, 1870, 2161, 2672
PpuMI RGGWCCY 3 cut(s) 329, 433, 1234
PsiI TTATAA 1 cut(s) 2552
Psp124BI GAGCTC 1 cut(s) 2457
Psp5II RGGWCCY 3 cut(s) 329, 433, 1234
Psp6I CCWGG 3 cut(s) 730, 966, 2467
PspEI GGTNACC 1 cut(s) 706
PspFI CCCAGC 1 cut(s) 871
PspGI CCWGG 3 cut(s) 730, 966, 2467
PspN4I GGNNCC 7 cut(s) 108, 280, 331, 1235, 2022, 2205, 2277
PspPPI RGGWCCY 3 cut(s) 329, 433, 1234
PsrI GAACNNNNNNTAC 2 cut(s) 1386, 1418
PstI CTGCAG 2 cut(s) 1648, 1669
PstNI CAGNNNCTG 1 cut(s) 589
PsuI RGATCY 2 cut(s) 1105, 2203
RruI TCGCGA 1 cut(s) 2424
RsaI GTAC 6 cut(s) 265, 280, 895, 1043, 1570, 1990
RsaNI GTAC 6 cut(s) 264, 279, 894, 1042, 1569, 1989
RseI CAYNNNNRTG 3 cut(s) 25, 1887, 2351
SacI GAGCTC 1 cut(s) 2457
SapI GCTCTTC 1 cut(s) 1325
SaqAI TTAA 2 cut(s) 1182, 1518
SatI GCNGC 5 cut(s) 1241, 1644, 2291, 2344, 2473
SchI GAGTC 5 cut(s) 700, 1642, 1871, 2161, 2672
ScrFI CCNGG 6 cut(s) 245, 732, 968, 1029, 1323, 2469
SduI GDGCHC 1 cut(s) 2457
SfaNI GCATC 5 cut(s) 461, 619, 1625, 1691, 2122
SfcI CTRYAG 2 cut(s) 1644, 1665
SinI GGWCC 6 cut(s) 106, 329, 433, 812, 1234, 2276
SmiMI CAYNNNNRTG 3 cut(s) 25, 1887, 2351
SmlI CTYRAG 1 cut(s) 1015
SmoI CTYRAG 1 cut(s) 1015
SpeI ACTAGT 1 cut(s) 517
SphI GCATGC 1 cut(s) 2320
SsiI CCGC 5 cut(s) 339, 908, 1810, 2279, 2290
SspI AATATT 2 cut(s) 1906, 2659
SspMI CTAG 7 cut(s) 518, 1167, 1454, 1460, 1535, 1685, 2487
SstI GAGCTC 1 cut(s) 2457
StyD4I CCNGG 6 cut(s) 243, 730, 966, 1027, 1321, 2467
StyI CCWWGG 5 cut(s) 75, 411, 701, 1624, 1871
TaaI ACNGT 5 cut(s) 147, 1078, 1297, 2123, 2350
TaiI ACGT 2 cut(s) 72, 371
TaqI TCGA 5 cut(s) 134, 1133, 1710, 1914, 2530
TatI WGTACW 1 cut(s) 893
TauI GCSGC 1 cut(s) 2293
TfiI GAWTC 3 cut(s) 943, 1306, 2095
Tru1I TTAA 2 cut(s) 1182, 1518
Tru9I TTAA 2 cut(s) 1182, 1518
TseFI GTSAC 4 cut(s) 976, 991, 2301, 2539
TseI GCWGC 4 cut(s) 1240, 1643, 2343, 2472
Tsp45I GTSAC 4 cut(s) 976, 991, 2301, 2539
TspGWI ACGGA 2 cut(s) 119, 2390
Van91I CCANNNNNTGG 1 cut(s) 197
VpaK11BI GGWCC 6 cut(s) 106, 329, 433, 812, 1234, 2276
XapI RAATTY 5 cut(s) 221, 754, 1283, 1725, 2632
XceI RCATGY 1 cut(s) 2320
XmnI GAANNNNTTC 2 cut(s) 320, 1449
XspI CTAG 7 cut(s) 518, 1167, 1454, 1460, 1535, 1685, 2487
Zsp2I ATGCAT 1 cut(s) 535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.