Rw5G012230

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
14316713 .. 14333832
17120 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G012230.1

Sequence Viewer

Length: 3054 bp
ATGAAGCAATCTTCTCTTTCATTACTCTGCTTCTGCCTAGGCTATCTGGGTTGTTTCTGGTTTCACGTTTCCATGGCTCAAAATGAAACTAATGCCACTACGGACCCATCTGAAGTGTCGGCTTTGAACTCGATCTTCCAACAGTGGGGAGCGCAGTCAGTGGCTCTGTGGAATATCAGTGGAGAGCCATGCAGTGGATCAGCCATCAATGGAACTGAATTTGAGAGTGGCCCAAATAACCCGGCCATTATATGTGATTGTACCTTTGACAGTGGTACCACCTGCCATATAACCCAACTGAGAGTTTATGCTCTAGACAAAACAGGAGCGTTTCCAGAAGAGCTTCTGGCTTTGAAATATCTTACCTTTCTGAAAATAGATCAGAACTTTTTCACAGGTCCCTTACCCTCATGGATTGGCAATATGTCTGCATTGACGTTGTTGTCAATTGCCCACAATGCATTCTCTGGGCCGATCCCCAAGGAACTCGGAAATCTGAAGGACCTAAACAAGCTGTCCTTTGGATCAAATAATTTCTCTGGAACACTCCCTCCAGAACTTGGTAATCTAATCAAGCTCCAGCAACTTTACATAGACAGTTGTGGACTTACTGGTGAAATTCCTTCAACATTTGCTAACCTTCGTAACATGCAAGTCCTTTGGGCATCAGACACTCCTTTCTCTGGAAAGATACCAGATTTCATTGGGAATTGGACGAAGCTAAACTCACTGAGACTTCAAGGGAACTCTTTTGAAGGCCCAATACCAACCAATTTTTCTCAGTTGACCTCATTGAATTCTCTGCGAATCAGTGATATATACAATGGGAGCTCCTCCTCTCTTGGTTTCATAAAAAATATGAAGAACTTGACTGATTTAGTTCTACGAAATGCATTGATTACTGGTAGCCTCCCTTCTGATATTGCAGAATATCCAACTTTACAGATACTGGATTTGAGTTTCAACAATTTGACAGGCCAACTCCCAAATGGCTTGTTCAACATGAGTTCTCTTACATACTTATTTCTTGGGAACAATAGTCTGTCTGGATCACTTCCCAACCAAAAGACCAGTATACTTCAGAACGTAGACTTGTCTTACAACTATTTGTCAGGGAGTCTTCCTCCATGGGTAACCTCAACAGCGCAACTGAACTTAGTGGTGAACAACTTCACATTTGACAGTTCAAACAAAACTCTTCCTGGGTTGAATTGCCTTCAGAGAAATTTTCCATGCAATAGAAATGCCCCACGATATGCAAACTTTTCAATCAAGTGTGGTGGACAAGAACTTAGAGGAAGTGATGGTATATTGTATGAGGCAGAAAACTCAACTCTTGGCCCAGCAACATTTAGTGTAACCAGTGCAGAGAAATGGGCGGTAAGCAATGTGGGTATGTTTGCTGACAGAAAGAATCCAGCCTATGTGGTGAATACCCTGGCACAAGTCACTGGAACAGATGTGACCCCAGAGATTTTCCAGACCTCAAGATTGTCTCCCGGATCGTTGAGGTACTTTGGCTTGGGTCTGCAGAATGGGCCTTATACTGTAACATTGCAATTTGCAGAAACAGTTTTTTTAGATCGTGCCTTACAAACATGGAAAAGTCTTGGTCGGCGCCTATTTGATATCTATATTCAGGGGGATCTAAAATGGAAGGACTTTGACATCTCGAAGGAGGCAGGTGGAGTTTTCAGAGCTGTTGCTAGAAACTTCAATGTTAATGTGTCAGAAAATTATCTTGACATTCATCTGTTCTGGGCTGGTAAGGGGACCTGCTGCATACCCGATCAAGGTCATTACGGCCCTCTAATATCAGCGGTTAAAGTTGTTCCAGAATTTACTCCAACTGTTTCTGGGATTCCACCAACTACTCCAGGAAAGAAGAACAACACAGGACTGATAGTTGGTATTGCAGTTCCTCTTGGAGTTGTGGGCTTGCTGTTAATATTTTCAGTTCTATATTTGAGGAGGAAAAAACCAGAAAAATATGATGATGAAGACCTTCTAGCACTAGAGAACAGACCAAATACTTTCAGTTATTCCGAGTTGAAAGAAGCAACAGAAGATTTTAATCCTTCAAATAAGCTAGGAGAAGGAGGATATGGCCCTGTTTACAAGGGTACACTTTCCGATGGGAAGGTAGTGGCTGTGAAGCAACTGTCAGTGGCATCTCACCAAGGGAAGAGTCAATTTGCTGCAGAAATTGCTACTATATCTGCAGTGCAACATCGCAATCTAGTGAAATTGTATGGATGCTGTATCGAAGGAAGCCAGCGAATTTTGGTTTATGAATATCTTGAAAACAAGAGCCTTGATCAAGCACTTTTTGGAACAAATGACCTGCACCTTGACTGGCTTACCCGCTTCAATATAATGTTGGGAACAGCAAGAGGACTTGCTTATCTTCATGAGGAGTCAAGCCCAAGGATTGTGCATAGAGATGTCAAAGCCAGTAATATTTTGCTGGACGCAGAACTCTGCCCAAAAATATCAGATTTTGGATTAGCAAAGCTATATGATGATGACAAAACCCATATCAGTACCCGAGTTGCAGGGACAATAGGCTATTTGGCACCAGAGTATGCAATGCGTGGACATCTGACTGAAAAGGCTGATGTTTTCAGTTTTGGGGTTGTTGTTTTGGAGATTCTCAGTGGAAGACCAAATGCTGACAGTGATTTGGATGCTGGAAAGACTTATCTCCTCGAATGGGCTTGGACTCTACATGAAAATAACAAGACTTTGGAGTTGGTGGATCCCAGATTGACAGATTTTGATGATGAAGAAGCCATTAGGTTCATAAAAGTAGCTTTCCAATGCACACAGGGACCGCCAATGACGCGGCCATCTATGTCACGCGTGGTTGGCATGCTTTCTGGAGATTTTGAAGTCGGCAGCACTGTCATGTCAAAGCCAAGTTATTTGACAGATTGGGACTATAAGGATCCTGGCAGCACAACTGGTGCTAGCACCGATATTGACCTTGCGCCATCTCCTGTGGAGGTTAATCGATCAATGGTCACTGACATTATAAGAGAAGGAAGTAGCTGA

Protein Analysis

1017

Amino Acids

111.46

Weight (kDa)

5.31

Isoelectric Point (pI)

32.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 93 - 199 8e-09 Leucine-rich repeat region
LRR_14 PF23598 182 - 270 5.6e-08 Leucine-rich repeat region
Malectin PF11721 422 - 608 1.4e-36 Malectin domain
Pkinase PF00069 693 - 955 2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 694 - 956 9.8e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3035
AarI CACCTGC 2 cut(s) 290, 1673
AasI GACNNNNNNGTC 1 cut(s) 442
Acc36I ACCTGC 4 cut(s) 290, 1673, 1784, 2352
Acc65I GGTACC 1 cut(s) 275
AccB1I GGYRCC 3 cut(s) 275, 1617, 2575
AccB7I CCANNNNNTGG 2 cut(s) 194, 560
AccI GTMKAC 2 cut(s) 1075, 1089
AccII CGCG 2 cut(s) 2845, 2862
AciI CCGC 5 cut(s) 1379, 1820, 2365, 2834, 2845
AcoI YGGCCR 2 cut(s) 243, 2846
AcsI RAATTY 6 cut(s) 218, 618, 796, 1225, 1838, 2280
AcuI CTGAAG 4 cut(s) 132, 518, 1064, 1202
AcyI GRCGYC 1 cut(s) 1618
AfaI GTAC 5 cut(s) 262, 277, 1514, 2125, 2545
AfiI CCNNNNNNNGG 6 cut(s) 145, 194, 560, 683, 1793, 2713
AflIII ACRYGT 1 cut(s) 2860
AjnI CCWGG 4 cut(s) 1201, 1437, 1876, 2950
AjuI GAANNNNNNNTTGG 2 cut(s) 760, 792
AloI GAACNNNNNNTCC 2 cut(s) 535, 567
Alw21I GWGCWC 1 cut(s) 833
Alw26I GTCTC 2 cut(s) 727, 1500
AlwNI CAGNNNCTG 1 cut(s) 949
Ama87I CYCGRG 1 cut(s) 2547
ApeKI GCWGC 4 cut(s) 1779, 2198, 2898, 2955
ApoI RAATTY 6 cut(s) 218, 618, 796, 1225, 1838, 2280
Asp700I GAANNNNTTC 4 cut(s) 342, 389, 1169, 2004
Asp718I GGTACC 1 cut(s) 275
AspA2I CCTAGG 1 cut(s) 37
AspLEI GCGC 4 cut(s) 154, 1147, 1620, 2992
AsuC2I CCSGG 2 cut(s) 242, 1500
AsuHPI GGTGA 4 cut(s) 626, 1174, 1441, 2168
AsuNHI GCTAGC 1 cut(s) 2969
AvaI CYCGRG 1 cut(s) 2547
AvaII GGWCC 5 cut(s) 103, 398, 502, 1773, 2831
AvrII CCTAGG 1 cut(s) 37
BaeI ACNNNNGTAYC 2 cut(s) 259, 292
BamHI GGATCC 2 cut(s) 2758, 2947
BanI GGYRCC 3 cut(s) 275, 1617, 2575
BanII GRGCYC 1 cut(s) 833
BarI GAAGNNNNNNTAC 4 cut(s) 747, 779, 898, 930
BbsI GAAGAC 3 cut(s) 1112, 2007, 2668
Bbv12I GWGCWC 1 cut(s) 833
BbvI GCAGC 4 cut(s) 1766, 2185, 2910, 2967
BccI CCATC 6 cut(s) 115, 212, 1298, 2129, 2857, 3001
BceAI ACGGC 1 cut(s) 1819
BciT130I CCWGG 4 cut(s) 1203, 1439, 1878, 2952
BclI TGATCA 1 cut(s) 2317
BcnI CCSGG 2 cut(s) 242, 1500
BcoDI GTCTC 2 cut(s) 727, 1500
BfaI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 2970
BfmI CTRYAG 3 cut(s) 1529, 2199, 2220
BfoI RGCGCY 1 cut(s) 1621
BfuAI ACCTGC 4 cut(s) 290, 1673, 1784, 2352
BisI GCNGC 5 cut(s) 1780, 2199, 2846, 2899, 2956
BlnI CCTAGG 1 cut(s) 37
BlsI GCNGC 5 cut(s) 1781, 2200, 2847, 2900, 2957
Bme1390I CCNGG 6 cut(s) 242, 1203, 1439, 1500, 1878, 2952
Bme18I GGWCC 5 cut(s) 103, 398, 502, 1773, 2831
BmeT110I CYCGRG 1 cut(s) 2547
BmiI GGNNCC 9 cut(s) 105, 277, 400, 1619, 1774, 2577, 2760, 2832, 2949
BmrFI CCNGG 6 cut(s) 242, 1203, 1439, 1500, 1878, 2952
BmsI GCATC 4 cut(s) 674, 2180, 2246, 2677
BmtI GCTAGC 1 cut(s) 2973
BpiI GAAGAC 3 cut(s) 1112, 2007, 2668
BplI GAGNNNNNCTC 2 cut(s) 1108, 1140
BpmI CTGGAG 4 cut(s) 537, 563, 1860, 2901
BpuEI CTTGAG 1 cut(s) 1471
BpuMI CCSGG 2 cut(s) 242, 1500
Bsa29I ATCGAT 1 cut(s) 3013
BsaBI GATNNNNATC 1 cut(s) 2073
BsaHI GRCGYC 1 cut(s) 1618
BsaJI CCNNGG 8 cut(s) 37, 72, 480, 1127, 1202, 1437, 2179, 2426
BsaXI ACNNNNNCTCC 2 cut(s) 535, 565
Bsc4I CCNNNNNNNGG 6 cut(s) 145, 194, 560, 683, 1793, 2713
Bse1I ACTGG 9 cut(s) 616, 907, 954, 1071, 1362, 1456, 2360, 2454, 2968
Bse3DI GCAATG 3 cut(s) 1393, 1553, 2595
Bse8I GATNNNNATC 1 cut(s) 2073
BseBI CCWGG 4 cut(s) 1203, 1439, 1878, 2952
BseCI ATCGAT 1 cut(s) 3013
BseDI CCNNGG 8 cut(s) 37, 72, 480, 1127, 1202, 1437, 2179, 2426
BseGI GGATG 2 cut(s) 2261, 2692
BseJI GATNNNNATC 1 cut(s) 2073
BseLI CCNNNNNNNGG 6 cut(s) 145, 194, 560, 683, 1793, 2713
BseMI GCAATG 3 cut(s) 1393, 1553, 2595
BseMII CTCAG 4 cut(s) 290, 722, 794, 2668
BseNI ACTGG 9 cut(s) 616, 907, 954, 1071, 1362, 1456, 2360, 2454, 2968
BseRI GAGGAG 5 cut(s) 823, 826, 1984, 2429, 2696
BseXI GCAGC 4 cut(s) 1766, 2185, 2910, 2967
BseYI CCCAGC 1 cut(s) 1342
BsgI GTGCAG 2 cut(s) 1386, 2330
Bsh1236I CGCG 2 cut(s) 2845, 2862
BshNI GGYRCC 3 cut(s) 275, 1617, 2575
BshVI ATCGAT 1 cut(s) 3013
BsiHKAI GWGCWC 1 cut(s) 833
BsiHKCI CYCGRG 1 cut(s) 2547
BsiSI CCGG 2 cut(s) 242, 1500
BslFI GGGAC 5 cut(s) 384, 1786, 2572, 2844, 2951
BslI CCNNNNNNNGG 6 cut(s) 145, 194, 560, 683, 1793, 2713
BsmAI GTCTC 2 cut(s) 727, 1500
BsmFI GGGAC 5 cut(s) 384, 1786, 2572, 2844, 2951
BsmI GAATGC 1 cut(s) 461
BsoBI CYCGRG 1 cut(s) 2547
Bsp1286I GDGCHC 1 cut(s) 833
Bsp19I CCATGG 2 cut(s) 72, 1127
BspACI CCGC 5 cut(s) 1379, 1820, 2365, 2834, 2845
BspCNI CTCAG 4 cut(s) 291, 723, 793, 2667
BspDI ATCGAT 1 cut(s) 3013
BspFNI CGCG 2 cut(s) 2845, 2862
BspHI TCATGA 1 cut(s) 2410
BspLI GGNNCC 9 cut(s) 105, 277, 400, 1619, 1774, 2577, 2760, 2832, 2949
BspMAI CTGCAG 3 cut(s) 1533, 2203, 2224
BspMI ACCTGC 4 cut(s) 290, 1673, 1784, 2352
BspOI GCTAGC 1 cut(s) 2973
BspQI GCTCTTC 1 cut(s) 333
BspT107I GGYRCC 3 cut(s) 275, 1617, 2575
BsrDI GCAATG 3 cut(s) 1393, 1553, 2595
BsrI ACTGG 9 cut(s) 616, 907, 954, 1071, 1362, 1456, 2360, 2454, 2968
BssECI CCNNGG 8 cut(s) 37, 72, 480, 1127, 1202, 1437, 2179, 2426
BssNAI GTATAC 1 cut(s) 1076
BssNI GRCGYC 1 cut(s) 1618
BssT1I CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
Bst1107I GTATAC 1 cut(s) 1076
Bst2UI CCWGG 4 cut(s) 1203, 1439, 1878, 2952
Bst6I CTCTTC 3 cut(s) 333, 1203, 2180
BstACI GRCGYC 1 cut(s) 1618
BstAPI GCANNNNNTGC 1 cut(s) 2207
BstC8I GCNNGC 4 cut(s) 1940, 2276, 2873, 2971
BstDEI CTNAG 6 cut(s) 299, 731, 780, 1156, 1292, 2654
BstDSI CCRYGG 2 cut(s) 72, 1127
BstEII GGTNACC 1 cut(s) 1132
BstF5I GGATG 2 cut(s) 2261, 2692
BstFNI CGCG 2 cut(s) 2845, 2862
BstH2I RGCGCY 1 cut(s) 1621
BstHHI GCGC 4 cut(s) 154, 1147, 1620, 2992
BstMAI GTCTC 2 cut(s) 727, 1500
BstMWI GCNNNNNNNGC 5 cut(s) 458, 1537, 2207, 2842, 2868
BstNI CCWGG 4 cut(s) 1203, 1439, 1878, 2952
BstNSI RCATGY 2 cut(s) 652, 2875
BstPI GGTNACC 1 cut(s) 1132
BstSCI CCNGG 6 cut(s) 240, 1201, 1437, 1498, 1876, 2950
BstSFI CTRYAG 3 cut(s) 1529, 2199, 2220
BstUI CGCG 2 cut(s) 2845, 2862
BstV1I GCAGC 4 cut(s) 1766, 2185, 2910, 2967
BstV2I GAAGAC 3 cut(s) 1112, 2007, 2668
BstX2I RGATCY 3 cut(s) 1645, 2758, 2947
BstYI RGATCY 3 cut(s) 1645, 2758, 2947
BstZ17I GTATAC 1 cut(s) 1076
Bsu15I ATCGAT 1 cut(s) 3013
BsuTUI ATCGAT 1 cut(s) 3013
BtgI CCRYGG 2 cut(s) 72, 1127
BtgZI GCGATG 1 cut(s) 2216
BtsCI GGATG 2 cut(s) 2261, 2692
BtsI GCAGTG 2 cut(s) 199, 2229
BveI ACCTGC 4 cut(s) 290, 1673, 1784, 2352
Cac8I GCNNGC 4 cut(s) 1940, 2276, 2873, 2971
CaiI CAGNNNCTG 1 cut(s) 949
CciI TCATGA 1 cut(s) 2410
CfoI GCGC 4 cut(s) 154, 1147, 1620, 2992
ClaI ATCGAT 1 cut(s) 3013
CseI GACGC 2 cut(s) 2480, 2851
Csp6I GTAC 5 cut(s) 261, 276, 1513, 2124, 2544
CspCI CAANNNNNGTGG 2 cut(s) 1261, 1296
CviQI GTAC 5 cut(s) 261, 276, 1513, 2124, 2544
DdeI CTNAG 6 cut(s) 299, 731, 780, 1156, 1292, 2654
DinI GGCGCC 1 cut(s) 1619
DrdI GACNNNNNNGTC 1 cut(s) 442
DseDI GACNNNNNNGTC 1 cut(s) 442
EaeI YGGCCR 2 cut(s) 243, 2846
Eam1104I CTCTTC 3 cut(s) 333, 1203, 2180
EarI CTCTTC 3 cut(s) 333, 1203, 2180
Ecl136II GAGCTC 1 cut(s) 831
Eco130I CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
Eco24I GRGCYC 1 cut(s) 833
Eco32I GATATC 1 cut(s) 1630
Eco47I GGWCC 5 cut(s) 103, 398, 502, 1773, 2831
Eco53kI GAGCTC 1 cut(s) 831
Eco57I CTGAAG 4 cut(s) 132, 518, 1064, 1202
Eco88I CYCGRG 1 cut(s) 2547
Eco91I GGTNACC 1 cut(s) 1132
EcoICRI GAGCTC 1 cut(s) 831
EcoO109I RGGNCCY 3 cut(s) 398, 502, 1773
EcoO65I GGTNACC 1 cut(s) 1132
EcoRI GAATTC 1 cut(s) 796
EcoRII CCWGG 4 cut(s) 1201, 1437, 1876, 2950
EcoRV GATATC 1 cut(s) 1630
EcoT14I CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
EcoT22I ATGCAT 2 cut(s) 463, 895
EcoT38I GRGCYC 1 cut(s) 833
EgeI GGCGCC 1 cut(s) 1619
EheI GGCGCC 1 cut(s) 1619
ErhI CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
FalI AAGNNNNNCTT 2 cut(s) 503, 535
FaqI GGGAC 5 cut(s) 384, 1786, 2572, 2844, 2951
FauI CCCGC 1 cut(s) 2372
FbaI TGATCA 1 cut(s) 2317
FblI GTMKAC 2 cut(s) 1075, 1089
Fnu4HI GCNGC 5 cut(s) 1780, 2199, 2846, 2899, 2956
FokI GGATG 2 cut(s) 2268, 2699
FriOI GRGCYC 1 cut(s) 833
Fsp4HI GCNGC 5 cut(s) 1780, 2199, 2846, 2899, 2956
FspBI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 2970
GlaI GCGC 4 cut(s) 153, 1146, 1619, 2991
GluI GCNGC 5 cut(s) 1780, 2199, 2846, 2899, 2956
GsaI CCCAGC 1 cut(s) 1346
GsuI CTGGAG 4 cut(s) 537, 563, 1860, 2901
HaeII RGCGCY 1 cut(s) 1621
HapII CCGG 2 cut(s) 242, 1500
HgaI GACGC 2 cut(s) 2480, 2851
HhaI GCGC 4 cut(s) 154, 1147, 1620, 2992
Hin1I GRCGYC 1 cut(s) 1618
Hin6I GCGC 4 cut(s) 152, 1145, 1618, 2990
HinP1I GCGC 4 cut(s) 152, 1145, 1618, 2990
HincII GTYRAC 1 cut(s) 786
HindII GTYRAC 1 cut(s) 786
HinfI GANTC 8 cut(s) 807, 1117, 1414, 1861, 2188, 2417, 2650, 2722
HpaII CCGG 2 cut(s) 242, 1500
HphI GGTGA 4 cut(s) 626, 1174, 1441, 2168
Hpy166II GTNNAC 9 cut(s) 605, 786, 1076, 1090, 1165, 1283, 2116, 2126, 2597
Hpy8I GTNNAC 9 cut(s) 605, 786, 1076, 1090, 1165, 1283, 2116, 2126, 2597
HpyCH4IV ACGT 3 cut(s) 66, 437, 1086
HpyF10VI GCNNNNNNNGC 5 cut(s) 458, 1537, 2207, 2842, 2868
HpyF3I CTNAG 6 cut(s) 299, 731, 780, 1156, 1292, 2654
HpySE526I ACGT 3 cut(s) 66, 437, 1086
Hsp92I GRCGYC 1 cut(s) 1618
HspAI GCGC 4 cut(s) 152, 1145, 1618, 2990
KasI GGCGCC 1 cut(s) 1617
KpnI GGTACC 1 cut(s) 279
Ksp22I TGATCA 1 cut(s) 2317
LguI GCTCTTC 1 cut(s) 333
LmnI GCTCC 5 cut(s) 149, 326, 582, 828, 836
Lsp1109I GCAGC 4 cut(s) 1766, 2185, 2910, 2967
LweI GCATC 4 cut(s) 674, 2180, 2246, 2677
MaeI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 2970
MaeII ACGT 3 cut(s) 66, 437, 1086
MaeIII GTNAC 8 cut(s) 644, 1132, 1357, 1447, 1462, 1549, 2856, 3022
MfeI CAATTG 1 cut(s) 447
MflI RGATCY 3 cut(s) 1645, 2758, 2947
MhlI GDGCHC 1 cut(s) 833
MluI ACGCGT 1 cut(s) 2860
Mly113I GGCGCC 1 cut(s) 1618
MlyI GAGTC 4 cut(s) 1126, 2197, 2426, 2716
MmeI TCCRAC 3 cut(s) 163, 959, 1871
Mph1103I ATGCAT 2 cut(s) 463, 895
MroXI GAANNNNTTC 4 cut(s) 342, 389, 1169, 2004
MseI TTAA 5 cut(s) 1722, 1824, 1946, 2073, 3009
MslI CAYNNNNRTG 2 cut(s) 2442, 2906
MspA1I CMGCKG 1 cut(s) 1820
MspI CCGG 2 cut(s) 242, 1500
MspR9I CCNGG 6 cut(s) 242, 1203, 1439, 1500, 1878, 2952
MunI CAATTG 1 cut(s) 447
Mva1269I GAATGC 1 cut(s) 461
MvaI CCWGG 4 cut(s) 1203, 1439, 1878, 2952
MvnI CGCG 2 cut(s) 2845, 2862
MwoI GCNNNNNNNGC 5 cut(s) 458, 1537, 2207, 2842, 2868
NarI GGCGCC 1 cut(s) 1618
NciI CCSGG 2 cut(s) 242, 1500
NcoI CCATGG 2 cut(s) 72, 1127
NheI GCTAGC 1 cut(s) 2969
NlaIV GGNNCC 9 cut(s) 105, 277, 400, 1619, 1774, 2577, 2760, 2832, 2949
NmuCI GTSAC 4 cut(s) 1447, 1462, 2856, 3022
NsiI ATGCAT 2 cut(s) 463, 895
NspI RCATGY 2 cut(s) 652, 2875
PaeI GCATGC 1 cut(s) 2875
PagI TCATGA 1 cut(s) 2410
PaqCI CACCTGC 2 cut(s) 290, 1673
PciSI GCTCTTC 1 cut(s) 333
PctI GAATGC 1 cut(s) 461
PdmI GAANNNNTTC 4 cut(s) 342, 389, 1169, 2004
PfeI GAWTC 4 cut(s) 807, 1414, 1861, 2650
PflMI CCANNNNNTGG 2 cut(s) 194, 560
PfoI TCCNGGA 2 cut(s) 1498, 1876
PkrI GCNGC 5 cut(s) 1781, 2200, 2847, 2900, 2957
PleI GAGTC 4 cut(s) 1125, 2196, 2425, 2716
PluTI GGCGCC 1 cut(s) 1621
PpsI GAGTC 4 cut(s) 1125, 2196, 2425, 2716
PpuMI RGGWCCY 3 cut(s) 398, 502, 1773
PsiI TTATAA 1 cut(s) 3035
Psp124BI GAGCTC 1 cut(s) 833
Psp5II RGGWCCY 3 cut(s) 398, 502, 1773
Psp6I CCWGG 4 cut(s) 1201, 1437, 1876, 2950
PspEI GGTNACC 1 cut(s) 1132
PspFI CCCAGC 1 cut(s) 1342
PspGI CCWGG 4 cut(s) 1201, 1437, 1876, 2950
PspN4I GGNNCC 9 cut(s) 105, 277, 400, 1619, 1774, 2577, 2760, 2832, 2949
PspPPI RGGWCCY 3 cut(s) 398, 502, 1773
PstI CTGCAG 3 cut(s) 1533, 2203, 2224
PstNI CAGNNNCTG 1 cut(s) 949
PsuI RGATCY 3 cut(s) 1645, 2758, 2947
RsaI GTAC 5 cut(s) 262, 277, 1514, 2125, 2545
RsaNI GTAC 5 cut(s) 261, 276, 1513, 2124, 2544
RseI CAYNNNNRTG 2 cut(s) 2442, 2906
SacI GAGCTC 1 cut(s) 833
SapI GCTCTTC 1 cut(s) 333
SaqAI TTAA 5 cut(s) 1722, 1824, 1946, 2073, 3009
SatI GCNGC 5 cut(s) 1780, 2199, 2846, 2899, 2956
SchI GAGTC 4 cut(s) 1126, 2197, 2426, 2716
ScrFI CCNGG 6 cut(s) 242, 1203, 1439, 1500, 1878, 2952
SduI GDGCHC 1 cut(s) 833
SfaNI GCATC 4 cut(s) 674, 2180, 2246, 2677
SfcI CTRYAG 3 cut(s) 1529, 2199, 2220
SfoI GGCGCC 1 cut(s) 1619
SinI GGWCC 5 cut(s) 103, 398, 502, 1773, 2831
SmiMI CAYNNNNRTG 2 cut(s) 2442, 2906
SmlI CTYRAG 1 cut(s) 1486
SmoI CTYRAG 1 cut(s) 1486
SphI GCATGC 1 cut(s) 2875
SsiI CCGC 5 cut(s) 1379, 1820, 2365, 2834, 2845
SspDI GGCGCC 1 cut(s) 1617
SspI AATATT 2 cut(s) 1950, 2461
SspMI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 2970
SstI GAGCTC 1 cut(s) 833
StyD4I CCNGG 6 cut(s) 240, 1201, 1437, 1498, 1876, 2950
StyI CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
TaiI ACGT 3 cut(s) 69, 440, 1089
TaqI TCGA 5 cut(s) 131, 1673, 2265, 2709, 3013
TauI GCSGC 1 cut(s) 2848
TfiI GAWTC 4 cut(s) 807, 1414, 1861, 2650
Tru1I TTAA 5 cut(s) 1722, 1824, 1946, 2073, 3009
Tru9I TTAA 5 cut(s) 1722, 1824, 1946, 2073, 3009
TseFI GTSAC 4 cut(s) 1447, 1462, 2856, 3022
TseI GCWGC 4 cut(s) 1779, 2198, 2898, 2955
Tsp45I GTSAC 4 cut(s) 1447, 1462, 2856, 3022
TspGWI ACGGA 1 cut(s) 116
Van91I CCANNNNNTGG 2 cut(s) 194, 560
VpaK11BI GGWCC 5 cut(s) 103, 398, 502, 1773, 2831
XapI RAATTY 6 cut(s) 218, 618, 796, 1225, 1838, 2280
XbaI TCTAGA 1 cut(s) 313
XceI RCATGY 2 cut(s) 652, 2875
XcmI CCANNNNNNNNNTGG 1 cut(s) 986
XmaJI CCTAGG 1 cut(s) 37
XmiI GTMKAC 2 cut(s) 1075, 1089
XmnI GAANNNNTTC 4 cut(s) 342, 389, 1169, 2004
XspI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 2970
Zsp2I ATGCAT 2 cut(s) 463, 895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.