Rmu_sc0002968.1_g000007
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002968.1
Physical Location & Seq
Reverse (-)
50140 .. 57021
6882 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002968.1_g000007.1.cds

Sequence Viewer

Length: 2028 bp
atggtctactttggcagttacttggatagttctggagttagcggtgagattccaccgacgtttgctaatctacgaaacttgaccatattccgggtgtcagacacagaactctctggcaggatacctgacttcgtaggatattggtcaaagcttacttccttgtttcttggaaacaacaagttgagtggtaaccttcctgaaaataaaagctcgtctcttgtcaatgtatctttgccttcagggttgaaatgcctccaaaggaacttcccttgcaatgttaaccctggaatccaacgttacattgggattaaatgtggtggtcctcggatcacgtcttccaatgggattgtgtatgatcaggaaaatgagatccttggtccagctacatattttgtgactggcacaagcagatggggagttagcaatgttggtattaaaacagagtatcaggattctgacctattccagactgctaggatctctgcttcatcacttagatactatggcttggggctggagaatggtaactacacggtcaaacttcagtttgcagaacaaaaaatcccagatactccaaaaaatcttgggagacgtgtatttgatatatatatccagggaattctagttttgaaggattttgatatacgaaaggaagcaggtgggaaatccttgcaagccgttcagaaggaatataaggcccaggtttcacagaactaccttgaaattcatctcttttgggctggaaaggggacttgctgcgtacctgaggttggtacttatggacctgttatttcagccatcagtgctacaccagatttcccccctactatcattccgaaccatccaactagtaacaagaataggacggggctgattgtggggattgttgttggtggtggagtacttttgattctattgttgttggttttctgtatagttcaaagaagaaaaaggattaacaccagtaaaaatgaagatctgttgggaatagatattggaccactcactttcagtttttcagagctaaagacagctacagatgactttagtccagcgaataagattggagagggaggatttggacctgtccataaaggtactcttaatgatggaagagtaattgccgtgaagcaattgtctgcagcatcccagcaaggaaaaaatgagtttgtagctgaaattgccaccatatctgccgtgcgacacaataacctagtgaatttgcatggattctgcactgagggagttaaacggctccttgtctatgagtatctggaaaacaagagtctcgatcatgcattatttggtttgacttatctccatgaggaatcaagggttcggattgtacacagagatgtgaaggccagtaatattctgctcgactctaatctcatccccaaaatatcagatttcggtttggccaagctttatgatgataaaaagacccacatcagtactcgtgttgcgggaacaatagggtatcttgcaccggaatatgccatgcgtggacacttgacacagaagactgatgtgtttgcctttggtgttcttgctctagaaattgtcagtggtaggccaaattctgaccggagcttggatggcgagatgatttatcttctcgaatgggcttggcacttgcatgaaaacaaacgcgaagttgaactagtggactctaggttatcagaattcaatgaggaagaggcaagacgaataaccaagataggacttttgtgcactcaaacatcaccaatgcaacgaccaccgatgtcgcgtgtggtgggaatgctttcaggagatattgaagtaatgacagtaacttcaaagcctagttacttgacagactgggaatttgacgatacaagtactttcaccagtctagccactgatatgtcagcaaaaggaactgatcccagcttttacaactcaccggcgagtacaagcactttgggggatccagggcagctttctaaaaatgacacggatgccttgcttcataatgttgttgatacccaatccctaccgacttaa

Protein Analysis

675

Amino Acids

74.28

Weight (kDa)

6.52

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 647
Acc36I ACCTGC 1 cut(s) 647
AccI GTMKAC 1 cut(s) 6
AccII CGCG 2 cut(s) 1653, 1771
AciI CCGC 2 cut(s) 42, 1466
AclI AACGTT 1 cut(s) 295
AclWI GGATC 6 cut(s) 335, 364, 485, 1901, 1946, 1959
AcoI YGGCCR 1 cut(s) 1419
AcsI RAATTY 6 cut(s) 618, 723, 1219, 1579, 1685, 1847
AcuI CTGAAG 2 cut(s) 222, 527
AfaI GTAC 8 cut(s) 762, 775, 903, 1099, 1347, 1456, 1864, 1936
AfiI CCNNNNNNNGG 3 cut(s) 90, 770, 1594
AflIII ACRYGT 1 cut(s) 592
AgsI TTSAA 8 cut(s) 247, 631, 722, 941, 1661, 1690, 1802, 1821
AhlI ACTAGT 2 cut(s) 848, 1663
AjiI CACGTC 2 cut(s) 333, 593
AjnI CCWGG 4 cut(s) 283, 612, 699, 1954
AloI GAACNNNNNNTCC 2 cut(s) 546, 578
Alw21I GWGCWC 1 cut(s) 1736
Alw26I GTCTC 3 cut(s) 219, 583, 1292
Alw44I GTGCAC 1 cut(s) 1732
AlwI GGATC 6 cut(s) 335, 364, 485, 1901, 1946, 1959
AoxI GGCC 4 cut(s) 696, 1362, 1419, 1574
ApaLI GTGCAC 1 cut(s) 1732
ApeKI GCWGC 3 cut(s) 756, 1142, 1960
ApoI RAATTY 6 cut(s) 618, 723, 1219, 1579, 1685, 1847
ArsI GACNNNNNNTTYG 2 cut(s) 1832, 1864
Asp700I GAANNNNTTC 1 cut(s) 1786
AspS9I GGNCC 6 cut(s) 320, 377, 697, 782, 998, 1082
AsuC2I CCSGG 1 cut(s) 92
AsuHPI GGTGA 4 cut(s) 56, 1737, 1861, 1917
AvaII GGWCC 5 cut(s) 320, 377, 782, 998, 1082
AxyI CCTNAGG 1 cut(s) 765
BaeGI GKGCMC 1 cut(s) 1736
BalI TGGCCA 1 cut(s) 1421
BamHI GGATCC 1 cut(s) 1951
BauI CACGAG 1 cut(s) 1458
BbsI GAAGAC 2 cut(s) 327, 1529
Bbv12I GWGCWC 1 cut(s) 1736
BbvI GCAGC 3 cut(s) 743, 1154, 1972
BccI CCATC 5 cut(s) 405, 806, 849, 1103, 1592
BceAI ACGGC 4 cut(s) 662, 1109, 1181, 1268
BciT130I CCWGG 4 cut(s) 285, 614, 701, 1956
BciVI GTATCC 1 cut(s) 114
BclI TGATCA 1 cut(s) 355
BcnI CCSGG 1 cut(s) 92
BcoDI GTCTC 3 cut(s) 219, 583, 1292
BcuI ACTAGT 2 cut(s) 848, 1663
BfaI CTAG 9 cut(s) 474, 623, 849, 1214, 1556, 1664, 1674, 1827, 1877
BfmI CTRYAG 2 cut(s) 1035, 1140
BfuAI ACCTGC 1 cut(s) 647
BfuI GTATCC 1 cut(s) 114
BglII AGATCT 1 cut(s) 976
BisI GCNGC 3 cut(s) 757, 1143, 1961
BlsI GCNGC 3 cut(s) 758, 1144, 1962
BmcAI AGTACT 3 cut(s) 903, 1456, 1864
Bme1390I CCNGG 5 cut(s) 92, 285, 614, 701, 1956
Bme18I GGWCC 5 cut(s) 320, 377, 782, 998, 1082
BmgBI CACGTC 2 cut(s) 333, 593
BmgT120I GGNCC 6 cut(s) 320, 377, 697, 782, 998, 1082
BmiI GGNNCC 2 cut(s) 1256, 1953
BmrFI CCNGG 5 cut(s) 92, 285, 614, 701, 1956
BmrI ACTGGG 1 cut(s) 1852
BmsI GCATC 2 cut(s) 1154, 1972
BmuI ACTGGG 1 cut(s) 1852
BoxI GACNNNNGTC 1 cut(s) 1047
BpiI GAAGAC 2 cut(s) 327, 1529
BpmI CTGGAG 2 cut(s) 54, 536
BpuMI CCSGG 1 cut(s) 92
BsaJI CCNNGG 6 cut(s) 283, 323, 373, 613, 699, 1955
BsaWI WCCGGW 2 cut(s) 1489, 1587
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 770, 1594
Bse118I RCCGGY 1 cut(s) 1927
Bse1I ACTGG 5 cut(s) 403, 963, 1365, 1847, 1872
Bse21I CCTNAGG 1 cut(s) 765
Bse3DI GCAATG 2 cut(s) 280, 430
BseBI CCWGG 4 cut(s) 285, 614, 701, 1956
BseDI CCNNGG 6 cut(s) 283, 323, 373, 613, 699, 1955
BseGI GGATG 5 cut(s) 841, 1145, 1392, 1603, 1987
BseLI CCNNNNNNNGG 3 cut(s) 90, 770, 1594
BseMI GCAATG 2 cut(s) 280, 430
BseMII CTCAG 2 cut(s) 756, 1230
BseNI ACTGG 5 cut(s) 403, 963, 1365, 1847, 1872
BseSI GKGCMC 1 cut(s) 1736
BseXI GCAGC 3 cut(s) 743, 1154, 1972
BseYI CCCAGC 2 cut(s) 1149, 1910
BsgI GTGCAG 1 cut(s) 1219
Bsh1236I CGCG 2 cut(s) 1653, 1771
BshFI GGCC 4 cut(s) 698, 1364, 1421, 1576
BsiHKAI GWGCWC 1 cut(s) 1736
BsiSI CCGG 4 cut(s) 91, 1490, 1588, 1928
BslFI GGGAC 1 cut(s) 763
BslI CCNNNNNNNGG 3 cut(s) 90, 770, 1594
BsmAI GTCTC 3 cut(s) 219, 583, 1292
BsmBI CGTCTC 2 cut(s) 219, 583
BsmFI GGGAC 1 cut(s) 763
BsmI GAATGC 1 cut(s) 1788
BsnI GGCC 4 cut(s) 698, 1364, 1421, 1576
Bsp1286I GDGCHC 1 cut(s) 1736
Bsp1407I TGTACA 1 cut(s) 1345
Bsp143I GATC 8 cut(s) 327, 355, 369, 477, 976, 1291, 1906, 1951
BspACI CCGC 2 cut(s) 42, 1466
BspANI GGCC 4 cut(s) 698, 1364, 1421, 1576
BspCNI CTCAG 2 cut(s) 757, 1231
BspFNI CGCG 2 cut(s) 1653, 1771
BspLI GGNNCC 2 cut(s) 1256, 1953
BspMAI CTGCAG 1 cut(s) 1144
BspMI ACCTGC 1 cut(s) 647
BspPI GGATC 6 cut(s) 335, 364, 485, 1901, 1946, 1959
BsrDI GCAATG 2 cut(s) 280, 430
BsrFI RCCGGY 1 cut(s) 1927
BsrGI TGTACA 1 cut(s) 1345
BsrI ACTGG 5 cut(s) 403, 963, 1365, 1847, 1872
BssAI RCCGGY 1 cut(s) 1927
BssECI CCNNGG 6 cut(s) 283, 323, 373, 613, 699, 1955
BssMI GATC 8 cut(s) 327, 355, 369, 477, 976, 1291, 1906, 1951
BssSI CACGAG 1 cut(s) 1458
BssT1I CCWWGG 1 cut(s) 373
Bst2BI CACGAG 1 cut(s) 1458
Bst2UI CCWGG 4 cut(s) 285, 614, 701, 1956
Bst4CI ACNGT 2 cut(s) 535, 1813
Bst6I CTCTTC 2 cut(s) 1108, 1692
BstAUI TGTACA 1 cut(s) 1345
BstC8I GCNNGC 1 cut(s) 675
BstDEI CTNAG 3 cut(s) 494, 765, 1239
BstEII GGTNACC 1 cut(s) 188
BstF5I GGATG 5 cut(s) 841, 1145, 1392, 1603, 1987
BstFNI CGCG 2 cut(s) 1653, 1771
BstKTI GATC 8 cut(s) 330, 358, 372, 480, 979, 1294, 1909, 1954
BstMAI GTCTC 3 cut(s) 219, 583, 1292
BstMBI GATC 8 cut(s) 327, 355, 369, 477, 976, 1291, 1906, 1951
BstMWI GCNNNNNNNGC 3 cut(s) 803, 1181, 1599
BstNI CCWGG 4 cut(s) 285, 614, 701, 1956
BstPAI GACNNNNGTC 1 cut(s) 1047
BstPI GGTNACC 1 cut(s) 188
BstSCI CCNGG 5 cut(s) 90, 283, 612, 699, 1954
BstSFI CTRYAG 2 cut(s) 1035, 1140
BstSLI GKGCMC 1 cut(s) 1736
BstUI CGCG 2 cut(s) 1653, 1771
BstV1I GCAGC 3 cut(s) 743, 1154, 1972
BstV2I GAAGAC 2 cut(s) 327, 1529
BstX2I RGATCY 4 cut(s) 369, 477, 976, 1951
BstYI RGATCY 4 cut(s) 369, 477, 976, 1951
Bsu36I CCTNAGG 1 cut(s) 765
BsuI GTATCC 1 cut(s) 114
BsuRI GGCC 4 cut(s) 698, 1364, 1421, 1576
BtrI CACGTC 2 cut(s) 333, 593
BtsCI GGATG 5 cut(s) 841, 1145, 1392, 1603, 1987
BtsIMutI CAGTG 4 cut(s) 808, 1236, 1573, 1881
BveI ACCTGC 1 cut(s) 647
Cac8I GCNNGC 1 cut(s) 675
Cfr10I RCCGGY 1 cut(s) 1927
Cfr13I GGNCC 6 cut(s) 320, 377, 697, 782, 998, 1082
Csp6I GTAC 8 cut(s) 761, 774, 902, 1098, 1346, 1455, 1863, 1935
CspCI CAANNNNNGTGG 2 cut(s) 166, 201
CviAII CATG 5 cut(s) 1226, 1295, 1322, 1501, 1640
CviQI GTAC 8 cut(s) 761, 774, 902, 1098, 1346, 1455, 1863, 1935
DdeI CTNAG 3 cut(s) 494, 765, 1239
DpnI GATC 8 cut(s) 329, 357, 371, 479, 978, 1293, 1908, 1953
DpnII GATC 8 cut(s) 327, 355, 369, 477, 976, 1291, 1906, 1951
EaeI YGGCCR 1 cut(s) 1419
Eam1104I CTCTTC 2 cut(s) 1108, 1692
EarI CTCTTC 2 cut(s) 1108, 1692
Eco130I CCWWGG 1 cut(s) 373
Eco47I GGWCC 5 cut(s) 320, 377, 782, 998, 1082
Eco57I CTGAAG 2 cut(s) 222, 527
Eco81I CCTNAGG 1 cut(s) 765
Eco91I GGTNACC 1 cut(s) 188
EcoO65I GGTNACC 1 cut(s) 188
EcoRI GAATTC 2 cut(s) 618, 1685
EcoRII CCWGG 4 cut(s) 283, 612, 699, 1954
EcoT14I CCWWGG 1 cut(s) 373
EcoT22I ATGCAT 1 cut(s) 1300
ErhI CCWWGG 1 cut(s) 373
Esp3I CGTCTC 2 cut(s) 219, 583
FaeI CATG 5 cut(s) 1229, 1298, 1325, 1504, 1643
FalI AAGNNNNNCTT 2 cut(s) 1086, 1118
FaqI GGGAC 1 cut(s) 763
FatI CATG 5 cut(s) 1225, 1294, 1321, 1500, 1639
FauI CCCGC 1 cut(s) 1459
FbaI TGATCA 1 cut(s) 355
FblI GTMKAC 1 cut(s) 6
Fnu4HI GCNGC 3 cut(s) 757, 1143, 1961
FokI GGATG 5 cut(s) 828, 1132, 1379, 1610, 1994
Fsp4HI GCNGC 3 cut(s) 757, 1143, 1961
FspBI CTAG 9 cut(s) 474, 623, 849, 1214, 1556, 1664, 1674, 1827, 1877
GluI GCNGC 3 cut(s) 757, 1143, 1961
GsaI CCCAGC 2 cut(s) 1153, 1914
GsuI CTGGAG 2 cut(s) 54, 536
HaeIII GGCC 4 cut(s) 698, 1364, 1421, 1576
HapII CCGG 4 cut(s) 91, 1490, 1588, 1928
Hin1II CATG 5 cut(s) 1229, 1298, 1325, 1504, 1643
HincII GTYRAC 1 cut(s) 280
HindII GTYRAC 1 cut(s) 280
HindIII AAGCTT 2 cut(s) 149, 1424
HinfI GANTC 9 cut(s) 49, 288, 452, 910, 1230, 1285, 1328, 1382, 1670
HpaI GTTAAC 1 cut(s) 280
HpaII CCGG 4 cut(s) 91, 1490, 1588, 1928
HphI GGTGA 4 cut(s) 56, 1737, 1861, 1917
Hpy166II GTNNAC 6 cut(s) 7, 280, 1348, 1508, 1669, 1734
Hpy8I GTNNAC 6 cut(s) 7, 280, 1348, 1508, 1669, 1734
Hpy99I CGWCG 1 cut(s) 61
HpyAV CCTTC 5 cut(s) 203, 246, 625, 679, 1354
HpyCH4III ACNGT 2 cut(s) 535, 1813
HpyCH4IV ACGT 4 cut(s) 59, 295, 332, 592
HpyF10VI GCNNNNNNNGC 3 cut(s) 803, 1181, 1599
HpyF3I CTNAG 3 cut(s) 494, 765, 1239
HpySE526I ACGT 4 cut(s) 59, 295, 332, 592
Hsp92II CATG 5 cut(s) 1229, 1298, 1325, 1504, 1643
Ksp22I TGATCA 1 cut(s) 355
KspAI GTTAAC 1 cut(s) 280
Kzo9I GATC 8 cut(s) 327, 355, 369, 477, 976, 1291, 1906, 1951
LmnI GCTCC 2 cut(s) 1260, 1590
Lsp1109I GCAGC 3 cut(s) 743, 1154, 1972
LweI GCATC 2 cut(s) 1154, 1972
MaeI CTAG 9 cut(s) 474, 623, 849, 1214, 1556, 1664, 1674, 1827, 1877
MaeII ACGT 4 cut(s) 59, 295, 332, 592
MaeIII GTNAC 8 cut(s) 17, 188, 296, 394, 524, 851, 1813, 1829
MalI GATC 8 cut(s) 329, 357, 371, 479, 978, 1293, 1908, 1953
MboI GATC 8 cut(s) 327, 355, 369, 477, 976, 1291, 1906, 1951
MboII GAAGA 7 cut(s) 327, 957, 986, 1125, 1534, 1607, 1709
MfeI CAATTG 1 cut(s) 1133
MflI RGATCY 4 cut(s) 369, 477, 976, 1951
MhlI GDGCHC 1 cut(s) 1736
MlsI TGGCCA 1 cut(s) 1421
MluNI TGGCCA 1 cut(s) 1421
MlyI GAGTC 3 cut(s) 1294, 1376, 1664
MmeI TCCRAC 2 cut(s) 316, 869
MnlI CCTC 9 cut(s) 263, 333, 760, 1063, 1067, 1234, 1318, 1687, 1693
Mox20I TGGCCA 1 cut(s) 1421
Mph1103I ATGCAT 1 cut(s) 1300
MroXI GAANNNNTTC 1 cut(s) 1786
MscI TGGCCA 1 cut(s) 1421
MseI TTAA 7 cut(s) 279, 309, 435, 957, 1104, 1248, 2026
MslI CAYNNNNRTG 3 cut(s) 1353, 1638, 1886
Msp20I TGGCCA 1 cut(s) 1421
MspI CCGG 4 cut(s) 91, 1490, 1588, 1928
MspR9I CCNGG 5 cut(s) 92, 285, 614, 701, 1956
MunI CAATTG 1 cut(s) 1133
Mva1269I GAATGC 1 cut(s) 1788
MvaI CCWGG 4 cut(s) 285, 614, 701, 1956
MvnI CGCG 2 cut(s) 1653, 1771
MwoI GCNNNNNNNGC 3 cut(s) 803, 1181, 1599
NciI CCSGG 1 cut(s) 92
NdeII GATC 8 cut(s) 327, 355, 369, 477, 976, 1291, 1906, 1951
NlaIII CATG 5 cut(s) 1229, 1298, 1325, 1504, 1643
NlaIV GGNNCC 2 cut(s) 1256, 1953
NmuCI GTSAC 1 cut(s) 394
NsiI ATGCAT 1 cut(s) 1300
PaqCI CACCTGC 1 cut(s) 647
PctI GAATGC 1 cut(s) 1788
PdmI GAANNNNTTC 1 cut(s) 1786
PfeI GAWTC 6 cut(s) 49, 288, 452, 910, 1230, 1328
PkrI GCNGC 3 cut(s) 758, 1144, 1962
PleI GAGTC 3 cut(s) 1293, 1376, 1664
PpsI GAGTC 3 cut(s) 1293, 1376, 1664
PshAI GACNNNNGTC 1 cut(s) 1047
Psp1406I AACGTT 1 cut(s) 295
Psp6I CCWGG 4 cut(s) 283, 612, 699, 1954
PspEI GGTNACC 1 cut(s) 188
PspFI CCCAGC 2 cut(s) 1149, 1910
PspGI CCWGG 4 cut(s) 283, 612, 699, 1954
PspN4I GGNNCC 2 cut(s) 1256, 1953
PspPI GGNCC 6 cut(s) 320, 377, 697, 782, 998, 1082
PstI CTGCAG 1 cut(s) 1144
PsuI RGATCY 4 cut(s) 369, 477, 976, 1951
RsaI GTAC 8 cut(s) 762, 775, 903, 1099, 1347, 1456, 1864, 1936
RsaNI GTAC 8 cut(s) 761, 774, 902, 1098, 1346, 1455, 1863, 1935
RseI CAYNNNNRTG 3 cut(s) 1353, 1638, 1886
SaqAI TTAA 7 cut(s) 279, 309, 435, 957, 1104, 1248, 2026
SatI GCNGC 3 cut(s) 757, 1143, 1961
Sau3AI GATC 8 cut(s) 327, 355, 369, 477, 976, 1291, 1906, 1951
Sau96I GGNCC 6 cut(s) 320, 377, 697, 782, 998, 1082
ScaI AGTACT 3 cut(s) 903, 1456, 1864
SchI GAGTC 3 cut(s) 1294, 1376, 1664
ScrFI CCNGG 5 cut(s) 92, 285, 614, 701, 1956
SduI GDGCHC 1 cut(s) 1736
SfaNI GCATC 2 cut(s) 1154, 1972
SfcI CTRYAG 2 cut(s) 1035, 1140
SgrAI CRCCGGYG 1 cut(s) 1927
SinI GGWCC 5 cut(s) 320, 377, 782, 998, 1082
SmiMI CAYNNNNRTG 3 cut(s) 1353, 1638, 1886
SpeI ACTAGT 2 cut(s) 848, 1663
SsiI CCGC 2 cut(s) 42, 1466
SspI AATATT 1 cut(s) 1372
SspMI CTAG 9 cut(s) 474, 623, 849, 1214, 1556, 1664, 1674, 1827, 1877
StyD4I CCNGG 5 cut(s) 90, 283, 612, 699, 1954
StyI CCWWGG 1 cut(s) 373
TaaI ACNGT 2 cut(s) 535, 1813
TaiI ACGT 4 cut(s) 62, 298, 335, 595
TaqI TCGA 3 cut(s) 1290, 1380, 1620
TatI WGTACW 5 cut(s) 901, 1345, 1454, 1862, 1934
TfiI GAWTC 6 cut(s) 49, 288, 452, 910, 1230, 1328
Tru1I TTAA 7 cut(s) 279, 309, 435, 957, 1104, 1248, 2026
Tru9I TTAA 7 cut(s) 279, 309, 435, 957, 1104, 1248, 2026
TscAI CASTG 4 cut(s) 808, 1243, 1573, 1888
TseFI GTSAC 1 cut(s) 394
TseI GCWGC 3 cut(s) 756, 1142, 1960
Tsp45I GTSAC 1 cut(s) 394
TspDTI ATGAA 5 cut(s) 477, 716, 987, 1656, 1982
TspGWI ACGGA 1 cut(s) 1994
TspRI CASTG 4 cut(s) 808, 1243, 1573, 1888
VneI GTGCAC 1 cut(s) 1732
VpaK11BI GGWCC 5 cut(s) 320, 377, 782, 998, 1082
XapI RAATTY 6 cut(s) 618, 723, 1219, 1579, 1685, 1847
XbaI TCTAGA 1 cut(s) 1555
XcmI CCANNNNNNNNNTGG 1 cut(s) 299
XmiI GTMKAC 1 cut(s) 6
XmnI GAANNNNTTC 1 cut(s) 1786
XspI CTAG 9 cut(s) 474, 623, 849, 1214, 1556, 1664, 1674, 1827, 1877
ZrmI AGTACT 3 cut(s) 903, 1456, 1864
Zsp2I ATGCAT 1 cut(s) 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.