Rh5DG137400

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
13841062 .. 13849534
8473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG137400.1

Sequence Viewer

Length: 1818 bp
ATGAAGCAATCTTCTCTTTCATTACTCTGCTTCTGCCTAGGCTATCTGGGTTGTTTCTGGTTTCACGTTTCCATGGCTCAAAGTGAAACTAATGCCACTACGGACCCATCTGAAGATAAGCTACGTAGCCTTCTAATCATGGCACAGCGATTCTCCTGCTTCACCAATTTTGCTGATTTAAGACCATCCCGGTGTTTCCTGGATTATAAAGGATATGCTACAATCTTTACTTTAATAATTTGTTTCAGGTCAATTGCCCACAATGCATTCTCTGGGCCGATCCCCAAGGAACTCGGAAATCTGAAGGACCTAAACATGCTGTCCTTTGGATCAAATAATTTCTCTGGAACACTCCCTCCAGAACTTGGTAATCTAATCAAGCTCCAGCAACTGAGACTTCAAGGGAACTCTTTTGAAGGCCCAATACCAACCAATTTTTCTCAGCTGACCTCATTGAATTCTCTGCGAATCAGTGATATATACAATGGGAGCTCCTCCTCTCTTGGTTTCATAAAAAATATGAAGAACTTGACTGATTTAGTTCTACGAAATGCATTGATTACTGGTAGCCTCCCTTCTGATATTGCAGAATATCCAACTTTACAGATACTATTTCTTGGGAACAATAGTCTGTCTGGATCACTTCCCAACCAAAAGACCAGTATACTTCAGAACGTAGACTTGTCTTACAACTATTTGTCAGGGAGTCTTCCTCCATGGGTAACCTCAACAGCGCAACTGAACTTAGTGGTGAACAACTTCACATTTGACAGTTCAAACAAAACTCTTCCTGGGTTGAATTGCCTTCAGAGAAATTTTCCATGCAATAGAAATGCCCCACGATATGCAAACTTTTCAATCAAGTGTGGTGGACAAGAACTTAGAGGAAGTGATGGTATATTGTATGAGGCAGAAAACTCAACTCTTGGCCCAGCAACATTTAGTGTAACCAGTGCAGAGAAATGGGCGGTAAGCAATGTGGGTATGTTTGCTGACAGAAAGAATCCAGCCTATGTGGTGAATACCCTGGCACAAGTCACTGGAACAGATGTGACCCCAGAGATTTTCCAGACCTCAAGATTGTCTCCCGGATCGTTGAGGTACTTTGGCTTGGGTCTGCAGAATGGGCCTTATACTGTAACATTGCAATTTGCAGAAACAGTTTTTTTAGATCGTGCCTTACAAACATGGAAAAGTCTTGGTCGGCGCCTATTTGATATCTATATTCAGGGGGATCTAAAATGGAAGGACTTTGACATCTCGAAGGAGGCAGGTGGAGTTTTCAGAGCTGTTGCTAGAAACTTCAATGTTAATGTTTCAGAAAATTATCTTGACATTCATCTGTTCTGGGCTGGTAAGGGGACCTGCTGCATACCCGATCAAGGTCATTACGGCCCTCTAATATCAGCGGTTAAAGTTGTTCCAGAATTTACTCCAACTGTTTCTGGGATTCCACCAACTACTCCAGGAAAGAAGAACAACACAGGACTGATAGTTGGTATTGCAGTTCCTCTTGGAGTTGTGGGCTTGCTGTTAATATTTTCAGTTCTATATTTGAGGAGGAAAAAACCAGAAAAATATGATGATGAAGATTGGGACTATAAGGATGTAACAACAAGTACCTTTTTGATTGATCGCGATACACCATCAACTGATAGTAAGAGTGAGCTCAACCTTCAGCCTGGCAGCACAACTGGTGCTAGCACCGATATTGACCTTGCGCCATCTCCTGTGGAGCTGAATCCAAGCACAGATAATGTAGAGGAACACTGGCTTCTGCAAAAGCATGGTGAAAGACCACATTACTATCATTACTAA

Protein Analysis

605

Amino Acids

66.88

Weight (kDa)

6.47

Isoelectric Point (pI)

36.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 94 - 204 1.4e-09 Leucine-rich repeat region
Malectin PF11721 285 - 471 5.5e-37 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 207
AarI CACCTGC 1 cut(s) 1262
Acc36I ACCTGC 2 cut(s) 1262, 1373
AccB1I GGYRCC 1 cut(s) 1206
AccB7I CCANNNNNTGG 1 cut(s) 365
AccI GTMKAC 2 cut(s) 664, 678
AccII CGCG 1 cut(s) 1638
AciI CCGC 2 cut(s) 968, 1409
AclWI GGATC 5 cut(s) 274, 337, 646, 1099, 1242
AcsI RAATTY 3 cut(s) 457, 814, 1427
AcuI CTGAAG 5 cut(s) 132, 323, 653, 791, 1661
AcyI GRCGYC 1 cut(s) 1207
AfaI GTAC 2 cut(s) 1103, 1621
AfiI CCNNNNNNNGG 2 cut(s) 365, 1382
AgsI TTSAA 7 cut(s) 401, 416, 457, 777, 799, 858, 1306
AjnI CCWGG 5 cut(s) 198, 790, 1026, 1465, 1681
AjuI GAANNNNNNNTTGG 2 cut(s) 421, 453
AloI GAACNNNNNNTCC 2 cut(s) 340, 372
AluBI AGCT 7 cut(s) 121, 382, 445, 492, 1289, 1669, 1738
AluI AGCT 7 cut(s) 121, 382, 445, 492, 1289, 1669, 1738
Alw21I GWGCWC 2 cut(s) 494, 1671
Alw26I GTCTC 2 cut(s) 388, 1089
AlwI GGATC 5 cut(s) 274, 337, 646, 1099, 1242
AlwNI CAGNNNCTG 1 cut(s) 391
AoxI GGCC 5 cut(s) 275, 418, 928, 1127, 1393
ApeKI GCWGC 2 cut(s) 1368, 1686
ApoI RAATTY 3 cut(s) 457, 814, 1427
Asp700I GAANNNNTTC 1 cut(s) 758
AspA2I CCTAGG 1 cut(s) 37
AspLEI GCGC 3 cut(s) 736, 1209, 1723
AspS9I GGNCC 8 cut(s) 103, 275, 307, 419, 929, 1127, 1362, 1394
AsuC2I CCSGG 2 cut(s) 190, 1089
AsuHPI GGTGA 4 cut(s) 154, 763, 1030, 1802
AsuNHI GCTAGC 1 cut(s) 1700
AvaII GGWCC 3 cut(s) 103, 307, 1362
AvrII CCTAGG 1 cut(s) 37
BanI GGYRCC 1 cut(s) 1206
BanII GRGCYC 2 cut(s) 494, 1671
BarI GAAGNNNNNNTAC 6 cut(s) 105, 137, 408, 440, 559, 591
BbsI GAAGAC 1 cut(s) 701
Bbv12I GWGCWC 2 cut(s) 494, 1671
BbvI GCAGC 2 cut(s) 1355, 1698
BccI CCATC 5 cut(s) 115, 193, 887, 1654, 1732
BceAI ACGGC 1 cut(s) 1408
BcgI CGANNNNNNTGC 2 cut(s) 138, 172
BciT130I CCWGG 5 cut(s) 200, 792, 1028, 1467, 1683
BcnI CCSGG 2 cut(s) 190, 1089
BcoDI GTCTC 2 cut(s) 388, 1089
BfaI CTAG 3 cut(s) 38, 1296, 1701
BfmI CTRYAG 1 cut(s) 1118
BfoI RGCGCY 1 cut(s) 1210
BfuAI ACCTGC 2 cut(s) 1262, 1373
BisI GCNGC 2 cut(s) 1369, 1687
BlnI CCTAGG 1 cut(s) 37
BlsI GCNGC 2 cut(s) 1370, 1688
Bme1390I CCNGG 7 cut(s) 190, 200, 792, 1028, 1089, 1467, 1683
Bme18I GGWCC 3 cut(s) 103, 307, 1362
BmgT120I GGNCC 8 cut(s) 103, 275, 307, 419, 929, 1127, 1362, 1394
BmiI GGNNCC 3 cut(s) 105, 1208, 1363
BmrFI CCNGG 7 cut(s) 190, 200, 792, 1028, 1089, 1467, 1683
BmtI GCTAGC 1 cut(s) 1704
BpiI GAAGAC 1 cut(s) 701
BplI GAGNNNNNCTC 2 cut(s) 697, 729
BpmI CTGGAG 3 cut(s) 342, 368, 1449
BpuEI CTTGAG 1 cut(s) 1060
BpuMI CCSGG 2 cut(s) 190, 1089
BsaAI YACGTR 1 cut(s) 125
BsaHI GRCGYC 1 cut(s) 1207
BsaJI CCNNGG 6 cut(s) 37, 72, 285, 716, 791, 1026
BsaXI ACNNNNNCTCC 2 cut(s) 340, 370
Bsc4I CCNNNNNNNGG 2 cut(s) 365, 1382
Bse1I ACTGG 6 cut(s) 568, 660, 951, 1045, 1699, 1775
Bse3DI GCAATG 2 cut(s) 982, 1142
BseBI CCWGG 5 cut(s) 200, 792, 1028, 1467, 1683
BseDI CCNNGG 6 cut(s) 37, 72, 285, 716, 791, 1026
BseGI GGATG 2 cut(s) 185, 1612
BseLI CCNNNNNNNGG 2 cut(s) 365, 1382
BseMI GCAATG 2 cut(s) 982, 1142
BseMII CTCAG 2 cut(s) 383, 455
BseNI ACTGG 6 cut(s) 568, 660, 951, 1045, 1699, 1775
BseRI GAGGAG 3 cut(s) 484, 487, 1573
BseXI GCAGC 2 cut(s) 1355, 1698
BseYI CCCAGC 1 cut(s) 931
BsgI GTGCAG 1 cut(s) 975
Bsh1236I CGCG 1 cut(s) 1638
BshFI GGCC 5 cut(s) 277, 420, 930, 1129, 1395
BshNI GGYRCC 1 cut(s) 1206
BsiHKAI GWGCWC 2 cut(s) 494, 1671
BsiSI CCGG 2 cut(s) 190, 1089
BslFI GGGAC 2 cut(s) 1375, 1610
BslI CCNNNNNNNGG 2 cut(s) 365, 1382
BsmAI GTCTC 2 cut(s) 388, 1089
BsmFI GGGAC 2 cut(s) 1375, 1610
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 5 cut(s) 277, 420, 930, 1129, 1395
Bsp1286I GDGCHC 2 cut(s) 494, 1671
Bsp143I GATC 8 cut(s) 279, 329, 638, 1091, 1171, 1234, 1378, 1633
Bsp19I CCATGG 2 cut(s) 72, 716
Bsp68I TCGCGA 1 cut(s) 1638
BspACI CCGC 2 cut(s) 968, 1409
BspANI GGCC 5 cut(s) 277, 420, 930, 1129, 1395
BspCNI CTCAG 2 cut(s) 384, 454
BspFNI CGCG 1 cut(s) 1638
BspLI GGNNCC 3 cut(s) 105, 1208, 1363
BspMAI CTGCAG 1 cut(s) 1122
BspMI ACCTGC 2 cut(s) 1262, 1373
BspOI GCTAGC 1 cut(s) 1704
BspPI GGATC 5 cut(s) 274, 337, 646, 1099, 1242
BspT107I GGYRCC 1 cut(s) 1206
BsrDI GCAATG 2 cut(s) 982, 1142
BsrI ACTGG 6 cut(s) 568, 660, 951, 1045, 1699, 1775
BssECI CCNNGG 6 cut(s) 37, 72, 285, 716, 791, 1026
BssMI GATC 8 cut(s) 279, 329, 638, 1091, 1171, 1234, 1378, 1633
BssNAI GTATAC 1 cut(s) 665
BssNI GRCGYC 1 cut(s) 1207
BssT1I CCWWGG 4 cut(s) 37, 72, 285, 716
Bst1107I GTATAC 1 cut(s) 665
Bst2UI CCWGG 5 cut(s) 200, 792, 1028, 1467, 1683
Bst4CI ACNGT 4 cut(s) 773, 1138, 1162, 1441
Bst6I CTCTTC 1 cut(s) 792
BstACI GRCGYC 1 cut(s) 1207
BstBAI YACGTR 1 cut(s) 125
BstC8I GCNNGC 2 cut(s) 1529, 1702
BstDEI CTNAG 4 cut(s) 392, 441, 745, 881
BstDSI CCRYGG 2 cut(s) 72, 716
BstEII GGTNACC 1 cut(s) 721
BstF5I GGATG 2 cut(s) 185, 1612
BstFNI CGCG 1 cut(s) 1638
BstH2I RGCGCY 1 cut(s) 1210
BstHHI GCGC 3 cut(s) 736, 1209, 1723
BstKTI GATC 8 cut(s) 282, 332, 641, 1094, 1174, 1237, 1381, 1636
BstMAI GTCTC 2 cut(s) 388, 1089
BstMBI GATC 8 cut(s) 279, 329, 638, 1091, 1171, 1234, 1378, 1633
BstMWI GCNNNNNNNGC 2 cut(s) 263, 1126
BstNI CCWGG 5 cut(s) 200, 792, 1028, 1467, 1683
BstNSI RCATGY 1 cut(s) 319
BstPI GGTNACC 1 cut(s) 721
BstSCI CCNGG 7 cut(s) 188, 198, 790, 1026, 1087, 1465, 1681
BstSFI CTRYAG 1 cut(s) 1118
BstSNI TACGTA 1 cut(s) 125
BstUI CGCG 1 cut(s) 1638
BstV1I GCAGC 2 cut(s) 1355, 1698
BstV2I GAAGAC 1 cut(s) 701
BstX2I RGATCY 1 cut(s) 1234
BstYI RGATCY 1 cut(s) 1234
BstZ17I GTATAC 1 cut(s) 665
BsuRI GGCC 5 cut(s) 277, 420, 930, 1129, 1395
BtgI CCRYGG 2 cut(s) 72, 716
BtsCI GGATG 2 cut(s) 185, 1612
BtsIMutI CAGTG 4 cut(s) 478, 958, 1038, 1768
BtuMI TCGCGA 1 cut(s) 1638
BveI ACCTGC 2 cut(s) 1262, 1373
Cac8I GCNNGC 2 cut(s) 1529, 1702
CaiI CAGNNNCTG 1 cut(s) 391
CfoI GCGC 3 cut(s) 736, 1209, 1723
Cfr13I GGNCC 8 cut(s) 103, 275, 307, 419, 929, 1127, 1362, 1394
Csp6I GTAC 2 cut(s) 1102, 1620
CspCI CAANNNNNGTGG 2 cut(s) 850, 885
CviAII CATG 7 cut(s) 73, 139, 316, 717, 822, 1188, 1787
CviQI GTAC 2 cut(s) 1102, 1620
DdeI CTNAG 4 cut(s) 392, 441, 745, 881
DinI GGCGCC 1 cut(s) 1208
DpnI GATC 8 cut(s) 281, 331, 640, 1093, 1173, 1236, 1380, 1635
DpnII GATC 8 cut(s) 279, 329, 638, 1091, 1171, 1234, 1378, 1633
Eam1104I CTCTTC 1 cut(s) 792
EarI CTCTTC 1 cut(s) 792
Ecl136II GAGCTC 2 cut(s) 492, 1669
Eco105I TACGTA 1 cut(s) 125
Eco130I CCWWGG 4 cut(s) 37, 72, 285, 716
Eco24I GRGCYC 2 cut(s) 494, 1671
Eco32I GATATC 1 cut(s) 1219
Eco47I GGWCC 3 cut(s) 103, 307, 1362
Eco53kI GAGCTC 2 cut(s) 492, 1669
Eco57I CTGAAG 5 cut(s) 132, 323, 653, 791, 1661
Eco91I GGTNACC 1 cut(s) 721
EcoICRI GAGCTC 2 cut(s) 492, 1669
EcoO109I RGGNCCY 2 cut(s) 307, 1362
EcoO65I GGTNACC 1 cut(s) 721
EcoRI GAATTC 1 cut(s) 457
EcoRII CCWGG 5 cut(s) 198, 790, 1026, 1465, 1681
EcoRV GATATC 1 cut(s) 1219
EcoT14I CCWWGG 4 cut(s) 37, 72, 285, 716
EcoT22I ATGCAT 2 cut(s) 268, 556
EcoT38I GRGCYC 2 cut(s) 494, 1671
EgeI GGCGCC 1 cut(s) 1208
EheI GGCGCC 1 cut(s) 1208
ErhI CCWWGG 4 cut(s) 37, 72, 285, 716
FaeI CATG 7 cut(s) 76, 142, 319, 720, 825, 1191, 1790
FaqI GGGAC 2 cut(s) 1375, 1610
FatI CATG 7 cut(s) 72, 138, 315, 716, 821, 1187, 1786
FblI GTMKAC 2 cut(s) 664, 678
Fnu4HI GCNGC 2 cut(s) 1369, 1687
FokI GGATG 2 cut(s) 172, 1619
FriOI GRGCYC 2 cut(s) 494, 1671
Fsp4HI GCNGC 2 cut(s) 1369, 1687
FspBI CTAG 3 cut(s) 38, 1296, 1701
GlaI GCGC 3 cut(s) 735, 1208, 1722
GluI GCNGC 2 cut(s) 1369, 1687
GsaI CCCAGC 1 cut(s) 935
GsuI CTGGAG 3 cut(s) 342, 368, 1449
HaeII RGCGCY 1 cut(s) 1210
HaeIII GGCC 5 cut(s) 277, 420, 930, 1129, 1395
HapII CCGG 2 cut(s) 190, 1089
HhaI GCGC 3 cut(s) 736, 1209, 1723
Hin1I GRCGYC 1 cut(s) 1207
Hin1II CATG 7 cut(s) 76, 142, 319, 720, 825, 1191, 1790
Hin6I GCGC 3 cut(s) 734, 1207, 1721
HinP1I GCGC 3 cut(s) 734, 1207, 1721
HinfI GANTC 6 cut(s) 150, 468, 706, 1003, 1450, 1741
HpaII CCGG 2 cut(s) 190, 1089
HphI GGTGA 4 cut(s) 154, 763, 1030, 1802
Hpy166II GTNNAC 4 cut(s) 665, 679, 754, 872
Hpy188I TCNGA 8 cut(s) 112, 296, 303, 580, 672, 810, 1286, 1321
Hpy188III TCNNGA 9 cut(s) 345, 359, 636, 1069, 1077, 1261, 1331, 1424, 1637
Hpy8I GTNNAC 4 cut(s) 665, 679, 754, 872
HpyAV CCTTC 8 cut(s) 140, 298, 410, 585, 815, 1240, 1258, 1685
HpyCH4III ACNGT 4 cut(s) 773, 1138, 1162, 1441
HpyCH4IV ACGT 3 cut(s) 66, 124, 675
HpyF10VI GCNNNNNNNGC 2 cut(s) 263, 1126
HpyF3I CTNAG 4 cut(s) 392, 441, 745, 881
HpySE526I ACGT 3 cut(s) 66, 124, 675
Hsp92I GRCGYC 1 cut(s) 1207
Hsp92II CATG 7 cut(s) 76, 142, 319, 720, 825, 1191, 1790
HspAI GCGC 3 cut(s) 734, 1207, 1721
KasI GGCGCC 1 cut(s) 1206
Kzo9I GATC 8 cut(s) 279, 329, 638, 1091, 1171, 1234, 1378, 1633
LmnI GCTCC 4 cut(s) 387, 489, 497, 1735
Lsp1109I GCAGC 2 cut(s) 1355, 1698
MaeI CTAG 3 cut(s) 38, 1296, 1701
MaeII ACGT 3 cut(s) 66, 124, 675
MaeIII GTNAC 6 cut(s) 721, 946, 1036, 1051, 1138, 1609
MalI GATC 8 cut(s) 281, 331, 640, 1093, 1173, 1236, 1380, 1635
MboI GATC 8 cut(s) 279, 329, 638, 1091, 1171, 1234, 1378, 1633
MboII GAAGA 7 cut(s) 3, 125, 535, 701, 779, 1486, 1601
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 1 cut(s) 1234
MhlI GDGCHC 2 cut(s) 494, 1671
Mly113I GGCGCC 1 cut(s) 1207
MlyI GAGTC 1 cut(s) 715
MmeI TCCRAC 2 cut(s) 620, 1460
Mph1103I ATGCAT 2 cut(s) 268, 556
MroXI GAANNNNTTC 1 cut(s) 758
MseI TTAA 5 cut(s) 179, 233, 1311, 1413, 1535
MslI CAYNNNNRTG 1 cut(s) 190
MspA1I CMGCKG 2 cut(s) 445, 1409
MspI CCGG 2 cut(s) 190, 1089
MspR9I CCNGG 7 cut(s) 190, 200, 792, 1028, 1089, 1467, 1683
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 266
MvaI CCWGG 5 cut(s) 200, 792, 1028, 1467, 1683
MvnI CGCG 1 cut(s) 1638
MwoI GCNNNNNNNGC 2 cut(s) 263, 1126
NarI GGCGCC 1 cut(s) 1207
NciI CCSGG 2 cut(s) 190, 1089
NcoI CCATGG 2 cut(s) 72, 716
NdeII GATC 8 cut(s) 279, 329, 638, 1091, 1171, 1234, 1378, 1633
NheI GCTAGC 1 cut(s) 1700
NlaIII CATG 7 cut(s) 76, 142, 319, 720, 825, 1191, 1790
NlaIV GGNNCC 3 cut(s) 105, 1208, 1363
NmuCI GTSAC 2 cut(s) 1036, 1051
NruI TCGCGA 1 cut(s) 1638
NsiI ATGCAT 2 cut(s) 268, 556
NspI RCATGY 1 cut(s) 319
PaqCI CACCTGC 1 cut(s) 1262
PctI GAATGC 1 cut(s) 266
PdmI GAANNNNTTC 1 cut(s) 758
PfeI GAWTC 5 cut(s) 150, 468, 1003, 1450, 1741
PflMI CCANNNNNTGG 1 cut(s) 365
PfoI TCCNGGA 3 cut(s) 198, 1087, 1465
PkrI GCNGC 2 cut(s) 1370, 1688
PleI GAGTC 1 cut(s) 714
PluTI GGCGCC 1 cut(s) 1210
PpsI GAGTC 1 cut(s) 714
Ppu21I YACGTR 1 cut(s) 125
PpuMI RGGWCCY 2 cut(s) 307, 1362
PsiI TTATAA 1 cut(s) 207
Psp124BI GAGCTC 2 cut(s) 494, 1671
Psp5II RGGWCCY 2 cut(s) 307, 1362
Psp6I CCWGG 5 cut(s) 198, 790, 1026, 1465, 1681
PspEI GGTNACC 1 cut(s) 721
PspFI CCCAGC 1 cut(s) 931
PspGI CCWGG 5 cut(s) 198, 790, 1026, 1465, 1681
PspN4I GGNNCC 3 cut(s) 105, 1208, 1363
PspPI GGNCC 8 cut(s) 103, 275, 307, 419, 929, 1127, 1362, 1394
PspPPI RGGWCCY 2 cut(s) 307, 1362
PstI CTGCAG 1 cut(s) 1122
PstNI CAGNNNCTG 1 cut(s) 391
PsuI RGATCY 1 cut(s) 1234
PvuII CAGCTG 1 cut(s) 445
RruI TCGCGA 1 cut(s) 1638
RsaI GTAC 2 cut(s) 1103, 1621
RsaNI GTAC 2 cut(s) 1102, 1620
RseI CAYNNNNRTG 1 cut(s) 190
SacI GAGCTC 2 cut(s) 494, 1671
SaqAI TTAA 5 cut(s) 179, 233, 1311, 1413, 1535
SatI GCNGC 2 cut(s) 1369, 1687
Sau3AI GATC 8 cut(s) 279, 329, 638, 1091, 1171, 1234, 1378, 1633
Sau96I GGNCC 8 cut(s) 103, 275, 307, 419, 929, 1127, 1362, 1394
SchI GAGTC 1 cut(s) 715
ScrFI CCNGG 7 cut(s) 190, 200, 792, 1028, 1089, 1467, 1683
SduI GDGCHC 2 cut(s) 494, 1671
SfcI CTRYAG 1 cut(s) 1118
SfoI GGCGCC 1 cut(s) 1208
SinI GGWCC 3 cut(s) 103, 307, 1362
SmiMI CAYNNNNRTG 1 cut(s) 190
SmlI CTYRAG 1 cut(s) 1075
SmoI CTYRAG 1 cut(s) 1075
SnaBI TACGTA 1 cut(s) 125
SsiI CCGC 2 cut(s) 968, 1409
SspDI GGCGCC 1 cut(s) 1206
SspI AATATT 1 cut(s) 1539
SspMI CTAG 3 cut(s) 38, 1296, 1701
SstI GAGCTC 2 cut(s) 494, 1671
StyD4I CCNGG 7 cut(s) 188, 198, 790, 1026, 1087, 1465, 1681
StyI CCWWGG 4 cut(s) 37, 72, 285, 716
TaaI ACNGT 4 cut(s) 773, 1138, 1162, 1441
TaiI ACGT 3 cut(s) 69, 127, 678
TaqI TCGA 1 cut(s) 1262
TfiI GAWTC 5 cut(s) 150, 468, 1003, 1450, 1741
Tru1I TTAA 5 cut(s) 179, 233, 1311, 1413, 1535
Tru9I TTAA 5 cut(s) 179, 233, 1311, 1413, 1535
TscAI CASTG 4 cut(s) 478, 958, 1045, 1775
TseFI GTSAC 2 cut(s) 1036, 1051
TseI GCWGC 2 cut(s) 1368, 1686
Tsp45I GTSAC 2 cut(s) 1036, 1051
TspDTI ATGAA 6 cut(s) 9, 17, 499, 536, 1328, 1602
TspGWI ACGGA 1 cut(s) 116
TspRI CASTG 4 cut(s) 478, 958, 1045, 1775
Van91I CCANNNNNTGG 1 cut(s) 365
VpaK11BI GGWCC 3 cut(s) 103, 307, 1362
XapI RAATTY 3 cut(s) 457, 814, 1427
XceI RCATGY 1 cut(s) 319
XmaJI CCTAGG 1 cut(s) 37
XmiI GTMKAC 2 cut(s) 664, 678
XmnI GAANNNNTTC 1 cut(s) 758
XspI CTAG 3 cut(s) 38, 1296, 1701
Zsp2I ATGCAT 2 cut(s) 268, 556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.