Rroxscaffold_1G00073870

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
94716240 .. 94732488
16249 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00073870.1

Sequence Viewer

Length: 4677 bp
ATGAAGCAGGTAGCTAGCTTCTCTTTCGGTAGAACATGTGATGACTACTTCTTCTTCTGTCTTATCTTCTTCCTGGGTTGCTTCTGGTTCCATGCTTCCACTGCCCAAAATGCTACTACGGACCCAACCGAAGTGGCGGCGTTGAACTCTATATTACTACAATGGGACGCGCCAGCGGTGCCTTTGTGGAACATCAGTGGAGAGCCATGCAGTGGATCGGCCATCAATGGCACCGCCTTCGAGGACGGCCTCAATAACCCAGCCATCACTTGCGACTGTAGTTTTGAAAGTAACAGCACCTGCCATATCACTCAATTGAGAGTTTATGCTTTGGACAAAACAGGAGTGTTACCTAAAGAACTTGTGGCATTGAAATATCTTACTTTTTTCAAAATCGACCAGAACTTTTTCACCGGTCCCCTACCAGCATGGATTGGCAATATGTCTGAGTTGACTACGTTGTCGATTGCCCACAATGACTTCTATGGACCCATCCCCAAGGAGCTTGGAAACCTTAAGAAACTAAATCTGCTGTCCTTTGGAATAAATAATTTCTCTGGAACACTGCCTCCAGAACTTGGTAATTTAGTCAATCTCGAAGAGCTTTACATAAACAGCTGTGGACTTGGTGGTGAAATTCCTACAACATTTGCTAAACTTCAAAAAATGCGAATCCTAGGGGCATCAGACAGTCCTTTCTCAGGAAAGATACCGGATTTCATAGGGAATTGGACAAAGTTAACCTCCTTGAGATTTGAAGGGAATTCTTTTGAAGGCCCAATACCAAGCAGTTTTTCTCAGTTGACCTCAATGAATTCTCTACGAATCAGTGATATCTATAATGTGAGCTCCTCTCTTGACTTCATAAAGAATTTGAAGAAATTGACTGATTTAGCTCTTCGAAATGCCTTAGTCACTGGCCGCATCCCTTCTGATATTAGAGAATATCAAAGTTTAAATATACTGGATTTGGGTTTCAACAATATAACAGATGCAAACTTCTCAATCAACTGTGGAGGACCAGACATGAGAGGAAGTGATGGCATATTATATGAGGCAGAAAACTCAACTCTTGGCCCAGCAACATATAATGTAACCAGTACAGAGAAATGGGCTGTTAGCAATGCGGGTTTGTTTGCTGAGAGGAAGAATCCAAGCTATTTGCTAACCTCCTTGGCACAGGTTACTGGGTCGGATGTGACCCCAGAGCTTTTCCAGACTGCAAGATTATCTGCAGGATCACTGAGATACTACGGCTTGGGTCTCCAGAATGGGCCTTATACAGTAAAATTACAATTTGCAGAAATGGTTTTTGATGATCGTGCATCACAAACTTGGAAAAGTTTAGGAAGGCGAGTATTTGATATCTATATTCAGGGGCATCTAGTAGTGAAGGACTTTGACATATCCAAGGAGGCAGGTGGTGTTTTAAGAGTAGCAGCGAAAAACTTCAATGTAAACGTGTCGGACAATTATGTTGAAATTCATTTGTTCTGGGCTGGTAAGGGGACCTGCTGCATACCTAATCAAGGTGATTATGGTCCACTAATATCAACGGTCAATGCTGTTCCAGGCACTGAAATTCTGTTTTCTTTCTCAGATTTTAAACCAACTGTTTCTGGGATTCCACCAACTACTCCAGGAAAGAAGAGCATGACAGGGGTGATTGTTGGCGTTGCAGTCTCTGTCGGAGTTGTGAGCTTGCTATTAATATTTGCAGTTTTATATTTGAGGAGAAAAATACCAGACAAAGATGACGATGAAGAACTTCAAGGATTAGACCCGCGACCAAATACATTCAGTTATAGTGAGTTAAAAGCTGCAACAGGAGATTTTAATCTTTCAAATAAACTAGGGGAGGGAGGATATGGCGCCGTTTACAAGGGCATACTCTCTGAAGCAAGGTTAGTGGCTGTGAAGCAACTTTCAGTAGCATCTCACCAAGGGAAGAGTCAATTTGCAGCAGAAATTGCTGCCATATCTGCAGTGCAACATCGCAATCTAGTGAAACTGTTTGGATGCTGTGTCGAAGGAAACCAGCGAATTTTGGTTTATGAATATCTTGAAAACAAGAGCCTTGATCAGGCACTTTTTGGAAACAACATGCATCTTGACTGGCATACCAGATTCAATATCTTGTTGGGAACAGCAAGAGGACTTGCCTATCTTCATGAGGAGTCGAGGCCAAGGATAGTACATAGAGATGTCAAAGCCAGTAATATTTTGCTTGATGCAGACCTCTCCCCAAAAATATCAGATTTTGGACTGGCAAAGCTTTATGATGATGAGAAAACCCACATCAGCACCCGAGTTGCAGGGACAATAGGCTATTTGGCACCGGAGTATGCAATGCGAGGACATCTGACTGAAAAGGCTGATGTATTCGGTTTTGGAGTTGTCATTTTGGAGACGCTTAGTGGGAGACCAAACACTGACAATGACTTGGATGCCGGAGAGATTTATCTCCTTGATTGGGCATGGACTCTACATGAAAAAAATGAGCGTTTGGGGCTTGTGGATCCGAGACTGACTGACTTTGATGAAGAAGAAGCAAATAGATTGATAAGATTAGCTTTCCTGTGTACTCAGGCATCCCCATTGATGCGGCCATCTATGTCTCGTGTGGTGGCCATGCTTGCTGGAGATATTGAAGTAGGTAATGTTTTGGCAAAGCCAAGTTATTTGACAGACTGGGATTTCAAAGATGTAACAGGAAGCTTCTTGATTGATGGTGATACCCCCTCAACTGGGATGACTCACCCCAGCAATCAGTCTACTGGCATCACAACCGGTGCTAACACCGGAATTGACCTGATGCAGTCTCCTGTGAATCCTAATCATTCATTGCTCACTGGGATTATAGGAGAAGGAAGTTGGCTACTACCTATGAATTTGAGAATGAAGCAGCAACCATCTCTTTCAGTCTTCTTGTTCTGCCTCTGCTTCCTGGGTTCCACTTGGTTTCAAGTTTCCACGGCTCAAAATGCCACTACTGACCCATCTGAAGTTCGAGCGTTGAACTCAATATTCTCACAATGGGATACTCAAGCGGTGGCGCTGTGGAATATCAGTGGAGAGCCATGCAGTGGATCAGCCATCAATGGAACCGAATTTGAGAGCCCTCCTAATAACCCAGCCATCATTTGCGAATGTACTTATGACAGTGGCACCACTTGCCATATTACCCAACTGAGAGTCTATGCTCTAAACAAACGAGGAGTGTTTGCAAAGGAACTTTTGGCTTTCAGATACCTGACCTTCTTATTGCTTGAAATTAATATGGACTCTGTCAAGTTTTTCCTCAATCCTATTGACTCTTGTGATCCTCCTTTACAGCCTGGTTTCAGTTTGCAAAGAGTTTTAGAAATAGACCGTTTGTCGTGGATGTTGAAAATCGATCAGAATTATTTCACAGGTCCTCTACCAGCATGGATTGGCAATATGACTGCATTGACATTATTGTCAATTGCTCACAATGCATTCTCTGGGCCCATCCCCAAGGAGCTTGGAAACCTCAAGGACTTAAATATGCTGTCCTTTGGAATAAATAACTTCTCTGGAACACTGCCTCCCGAACTTGGTAATTTGGTCAAGCTTCAACAACTATTCCTATATTGGGCTGAACTCACAAGGGTCAATGTGTTAAATTTAAGATGGGCATCAGACAGTCCCTTCTCAGGAAGGATACCTGATTTCATTGGGAATTGGACAAAGATAAACTCTCTGCGATTTCAAGGGAACTCTTTTAGAGGTCCAATACCGACCAGTTTTTCTCAACTAACTGCCTTGAATTCTCTGCGAATCAGTGATATCTACAATGTAAGCTCCTCTCTTGATTTCATAAAGAATTTGAAGAGCTTGACTGATTTAGCGCTACGAAATGCATTAATTACTGGTAGCATCCCTTCTAATATTGGAGAATACCAAAGTTTACAGATACTGGATTTGAGTTTCAACAATTTAACAGGTCAACTTCCAGATGCAAAATTCTCAGTCAACTGTGGTGGGCTAGAACTGAGAGGGAGTGATGACATATTGTATGAGACTGAAGACTCAGCTCTTGGCCCAGCAACGTTTAATGTAACAAGTTCAGAGAAATGGGCTGTTAGCAATGTGGGTTTGTTTGCTGACAGAAAGAATCCGAGCTTTGTGGTAAATACCCTGGCACAAGTCAGTGGGACAGATGTGACCCCAGAGCTTTTCCAGACCTCAAGGTTGTCTCCAGGATCACTGAGATACTATGGCCTGGGTCTTGAGAATGGGCCTTATACTGTAAAATTGCAATTTGCAGAAACAGTTTTCGATGATCGTGCCTTGCAAACTTGGAAAAGTCTAGGACGGCGTATGTTTGATATCTATATTCAGGGGAACCTTTTATTGAAGGACTTTGACATATCAAAGGAGGCAGGAGGGGTTTTAAGAGCTGTTGTGAAAACCTTCAGTGTTAATGTTTCAGAGAATTATCTTGAAATTCATTTATTCTGGGCTGGTAAGGGGACCTGCTGCACACCTGATCAAGGTCATTACGGCCCACTAATAGCTGCTGTGCATGCTGCTTCAGATTTTACACCAACTGTTTCTGGTGTTCCACCAACTACTCTAGGAATGAAGAGCAGGACAGGGCTGATGGGTATTCTGGTTCCTGTTGGAGTTTTGGTGTTGCTAGTTATAATTTGA

Protein Analysis

1558

Amino Acids

170.84

Weight (kDa)

5.31

Isoelectric Point (pI)

32.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 95 - 205 3.3e-08 Leucine-rich repeat region
LRR_14 PF23598 187 - 276 6.7e-06 Leucine-rich repeat region
Malectin PF11721 334 - 518 2e-41 Malectin domain
PK_Tyr_Ser-Thr PF07714 613 - 878 4e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 613 - 816 4.4e-44 Protein kinase domain
Malectin PF11721 1330 - 1516 1.7e-35 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4670
AarI CACCTGC 2 cut(s) 308, 1409
AasI GACNNNNNNGTC 2 cut(s) 460, 3460
Acc36I ACCTGC 4 cut(s) 308, 1409, 1520, 4508
AccB1I GGYRCC 5 cut(s) 178, 230, 1871, 2335, 3167
AccB7I CCANNNNNTGG 3 cut(s) 212, 578, 3086
AccI GTMKAC 1 cut(s) 2774
AccII CGCG 2 cut(s) 170, 1786
AciI CCGC 8 cut(s) 137, 176, 234, 922, 1127, 1784, 2605, 3050
AclI AACGTT 1 cut(s) 4073
AclWI GGATC 7 cut(s) 223, 1246, 2513, 2526, 3097, 3317, 4234
AcoI YGGCCR 4 cut(s) 219, 919, 2606, 2628
AcuI CTGAAG 5 cut(s) 1917, 3024, 4068, 4423, 4542
AcyI GRCGYC 1 cut(s) 1872
AfaI GTAC 4 cut(s) 1102, 2196, 2584, 3154
AfeI AGCGCT 1 cut(s) 3873
AflII CTTAAG 1 cut(s) 515
AflIII ACRYGT 2 cut(s) 35, 1461
AgeI ACCGGT 2 cut(s) 413, 2789
AhdI GACNNNNNGTC 1 cut(s) 3376
AjnI CCWGG 8 cut(s) 72, 1570, 1639, 2946, 3337, 4161, 4222, 4245
AjuI GAANNNNNNNTTGG 2 cut(s) 778, 810
AloI GAACNNNNNNTCC 4 cut(s) 553, 585, 3553, 3585
Alw21I GWGCWC 1 cut(s) 851
Alw26I GTCTC 9 cut(s) 1268, 1687, 2402, 2416, 2518, 2622, 2826, 4037, 4224
AlwI GGATC 7 cut(s) 223, 1246, 2513, 2526, 3097, 3317, 4234
AlwNI CAGNNNCTG 4 cut(s) 300, 1577, 1685, 3940
Ama87I CYCGRG 1 cut(s) 2307
Aor51HI AGCGCT 1 cut(s) 3873
ApaI GGGCCC 1 cut(s) 3492
ApeKI GCWGC 9 cut(s) 1439, 1515, 1820, 1961, 1973, 2905, 4503, 4541, 4553
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AseI ATTAAT 3 cut(s) 1709, 3276, 3887
AsiGI ACCGGT 2 cut(s) 413, 2789
Asp700I GAANNNNTTC 5 cut(s) 407, 1448, 1767, 3407, 4436
AspA2I CCTAGG 1 cut(s) 676
AspLEI GCGC 4 cut(s) 172, 1874, 3058, 3874
AsuHPI GGTGA 7 cut(s) 403, 644, 1544, 1675, 1931, 2744, 2750
AsuII TTCGAA 1 cut(s) 901
AsuNHI GCTAGC 1 cut(s) 14
AvaI CYCGRG 1 cut(s) 2307
AvaII GGWCC 9 cut(s) 121, 416, 488, 1019, 1509, 1541, 3416, 3752, 4497
AvrII CCTAGG 1 cut(s) 676
BaeGI GKGCMC 1 cut(s) 3492
BalI TGGCCA 1 cut(s) 2630
BamHI GGATCC 1 cut(s) 2518
BanI GGYRCC 5 cut(s) 178, 230, 1871, 2335, 3167
BanII GRGCYC 3 cut(s) 851, 3122, 3492
BarI GAAGNNNNNNTAC 4 cut(s) 765, 797, 3889, 3921
BauI CACGAG 1 cut(s) 2619
BbsI GAAGAC 2 cut(s) 2917, 4056
Bbv12I GWGCWC 1 cut(s) 851
BbvI GCAGC 9 cut(s) 1451, 1502, 1807, 1960, 1973, 2917, 4490, 4528, 4540
BceAI ACGGC 6 cut(s) 262, 1270, 1859, 2991, 4355, 4543
BcgI CGANNNNNNTGC 4 cut(s) 220, 254, 4292, 4326
BciT130I CCWGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
BciVI GTATCC 2 cut(s) 3034, 3678
BclI TGATCA 2 cut(s) 2080, 4513
BcoDI GTCTC 9 cut(s) 1268, 1687, 2402, 2416, 2518, 2622, 2826, 4037, 4224
BfaI CTAG 9 cut(s) 15, 677, 1385, 1853, 2003, 4010, 4334, 4601, 4664
BfmI CTRYAG 3 cut(s) 277, 1233, 1983
BfoI RGCGCY 3 cut(s) 1875, 3059, 3875
BfrI CTTAAG 1 cut(s) 515
BfuAI ACCTGC 4 cut(s) 308, 1409, 1520, 4508
BfuI GTATCC 2 cut(s) 3034, 3678
BlnI CCTAGG 1 cut(s) 676
Bme1390I CCNGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
Bme18I GGWCC 9 cut(s) 121, 416, 488, 1019, 1509, 1541, 3416, 3752, 4497
BmeRI GACNNNNNGTC 1 cut(s) 3376
BmeT110I CYCGRG 1 cut(s) 2307
BmrFI CCNGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
BmrI ACTGGG 4 cut(s) 1197, 2701, 2757, 2862
BmtI GCTAGC 1 cut(s) 18
BmuI ACTGGG 4 cut(s) 1197, 2701, 2757, 2862
BpiI GAAGAC 2 cut(s) 2917, 4056
BplI GAGNNNNNCTC 2 cut(s) 838, 870
BpmI CTGGAG 5 cut(s) 555, 1250, 1623, 2661, 4206
Bpu14I TTCGAA 1 cut(s) 901
BpuEI CTTGAG 5 cut(s) 769, 3030, 3500, 4195, 4274
Bsa29I ATCGAT 1 cut(s) 3396
BsaBI GATNNNNATC 2 cut(s) 1836, 3658
BsaHI GRCGYC 1 cut(s) 1872
BsaI GGTCTC 2 cut(s) 1268, 2416
BsaWI WCCGGW 5 cut(s) 413, 712, 2338, 2789, 2801
BsaXI ACNNNNNCTCC 6 cut(s) 553, 583, 3553, 3583, 4641, 4671
Bse118I RCCGGY 2 cut(s) 413, 2789
Bse3DI GCAATG 4 cut(s) 1129, 2355, 2843, 4117
Bse8I GATNNNNATC 2 cut(s) 1836, 3658
BseBI CCWGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
BseCI ATCGAT 1 cut(s) 3396
BseJI GATNNNNATC 2 cut(s) 1836, 3658
BseMI GCAATG 4 cut(s) 1129, 2355, 2843, 4117
BseRI GAGGAG 5 cut(s) 841, 1747, 2189, 3231, 3817
BseSI GKGCMC 1 cut(s) 3492
BseXI GCAGC 9 cut(s) 1451, 1502, 1807, 1960, 1973, 2917, 4490, 4528, 4540
BseYI CCCAGC 5 cut(s) 259, 1078, 2762, 3133, 4066
BsgI GTGCAG 1 cut(s) 4489
Bsh1236I CGCG 2 cut(s) 170, 1786
BshNI GGYRCC 5 cut(s) 178, 230, 1871, 2335, 3167
BshTI ACCGGT 2 cut(s) 413, 2789
BshVI ATCGAT 1 cut(s) 3396
BsiHKAI GWGCWC 1 cut(s) 851
BsiHKCI CYCGRG 1 cut(s) 2307
BsiSI CCGG 6 cut(s) 414, 713, 2339, 2451, 2790, 2802
BslFI GGGAC 7 cut(s) 179, 402, 1522, 2332, 3654, 4192, 4510
BsmAI GTCTC 9 cut(s) 1268, 1687, 2402, 2416, 2518, 2622, 2826, 4037, 4224
BsmBI CGTCTC 1 cut(s) 2402
BsmFI GGGAC 7 cut(s) 179, 402, 1522, 2332, 3654, 4192, 4510
BsmI GAATGC 1 cut(s) 3479
Bso31I GGTCTC 2 cut(s) 1268, 2416
BsoBI CYCGRG 1 cut(s) 2307
Bsp119I TTCGAA 1 cut(s) 901
Bsp120I GGGCCC 1 cut(s) 3488
Bsp1286I GDGCHC 3 cut(s) 851, 3122, 3492
BspACI CCGC 8 cut(s) 137, 176, 234, 922, 1127, 1784, 2605, 3050
BspDI ATCGAT 1 cut(s) 3396
BspFNI CGCG 2 cut(s) 170, 1786
BspHI TCATGA 1 cut(s) 2170
BspMAI CTGCAG 2 cut(s) 1237, 1987
BspMI ACCTGC 4 cut(s) 308, 1409, 1520, 4508
BspOI GCTAGC 1 cut(s) 18
BspPI GGATC 7 cut(s) 223, 1246, 2513, 2526, 3097, 3317, 4234
BspQI GCTCTTC 5 cut(s) 594, 903, 1643, 3848, 4604
BspT104I TTCGAA 1 cut(s) 901
BspT107I GGYRCC 5 cut(s) 178, 230, 1871, 2335, 3167
BspTI CTTAAG 1 cut(s) 515
BspTNI GGTCTC 2 cut(s) 1268, 2416
BsrDI GCAATG 4 cut(s) 1129, 2355, 2843, 4117
BsrFI RCCGGY 2 cut(s) 413, 2789
BssAI RCCGGY 2 cut(s) 413, 2789
BssNI GRCGYC 1 cut(s) 1872
BssSI CACGAG 1 cut(s) 2619
BssT1I CCWWGG 7 cut(s) 498, 676, 1173, 1410, 1942, 2186, 3498
Bst2BI CACGAG 1 cut(s) 2619
Bst2UI CCWGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
Bst6I CTCTTC 6 cut(s) 594, 903, 1643, 1943, 3848, 4604
BstACI GRCGYC 1 cut(s) 1872
BstAFI CTTAAG 1 cut(s) 515
BstAPI GCANNNNNTGC 2 cut(s) 1970, 3174
BstBI TTCGAA 1 cut(s) 901
BstC8I GCNNGC 5 cut(s) 16, 174, 1703, 2637, 4551
BstDSI CCRYGG 1 cut(s) 2973
BstENI CCTNNNNNAGG 4 cut(s) 699, 1527, 2081, 4515
BstFNI CGCG 2 cut(s) 170, 1786
BstH2I RGCGCY 3 cut(s) 1875, 3059, 3875
BstHHI GCGC 4 cut(s) 172, 1874, 3058, 3874
BstMAI GTCTC 9 cut(s) 1268, 1687, 2402, 2416, 2518, 2622, 2826, 4037, 4224
BstNI CCWGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
BstNSI RCATGY 3 cut(s) 39, 2107, 4553
BstSCI CCNGG 8 cut(s) 72, 1570, 1639, 2946, 3337, 4161, 4222, 4245
BstSFI CTRYAG 3 cut(s) 277, 1233, 1983
BstSLI GKGCMC 1 cut(s) 3492
BstUI CGCG 2 cut(s) 170, 1786
BstV1I GCAGC 9 cut(s) 1451, 1502, 1807, 1960, 1973, 2917, 4490, 4528, 4540
BstV2I GAAGAC 2 cut(s) 2917, 4056
BstX2I RGATCY 1 cut(s) 2518
BstYI RGATCY 1 cut(s) 2518
Bsu15I ATCGAT 1 cut(s) 3396
BsuI GTATCC 2 cut(s) 3034, 3678
BsuTUI ATCGAT 1 cut(s) 3396
BtgI CCRYGG 1 cut(s) 2973
BtgZI GCGATG 1 cut(s) 1979
BtsI GCAGTG 6 cut(s) 99, 217, 563, 1992, 3091, 3563
BveI ACCTGC 4 cut(s) 308, 1409, 1520, 4508
Cac8I GCNNGC 5 cut(s) 16, 174, 1703, 2637, 4551
CaiI CAGNNNCTG 4 cut(s) 300, 1577, 1685, 3940
CciI TCATGA 1 cut(s) 2170
CfoI GCGC 4 cut(s) 172, 1874, 3058, 3874
Cfr10I RCCGGY 2 cut(s) 413, 2789
ClaI ATCGAT 1 cut(s) 3396
CseI GACGC 2 cut(s) 176, 2419
Csp6I GTAC 4 cut(s) 1101, 2195, 2583, 3153
CspAI ACCGGT 2 cut(s) 413, 2789
CspCI CAANNNNNGTGG 6 cut(s) 114, 149, 1890, 1925, 3985, 4020
CviQI GTAC 4 cut(s) 1101, 2195, 2583, 3153
DinI GGCGCC 1 cut(s) 1873
DraI TTTAAA 2 cut(s) 957, 1606
DrdI GACNNNNNNGTC 2 cut(s) 460, 3460
DriI GACNNNNNGTC 1 cut(s) 3376
DseDI GACNNNNNNGTC 2 cut(s) 460, 3460
EaeI YGGCCR 4 cut(s) 219, 919, 2606, 2628
Eam1104I CTCTTC 6 cut(s) 594, 903, 1643, 1943, 3848, 4604
Eam1105I GACNNNNNGTC 1 cut(s) 3376
EarI CTCTTC 6 cut(s) 594, 903, 1643, 1943, 3848, 4604
Ecl136II GAGCTC 1 cut(s) 849
Eco130I CCWWGG 7 cut(s) 498, 676, 1173, 1410, 1942, 2186, 3498
Eco24I GRGCYC 3 cut(s) 851, 3122, 3492
Eco31I GGTCTC 2 cut(s) 1268, 2416
Eco32I GATATC 4 cut(s) 835, 1366, 3811, 4354
Eco47I GGWCC 9 cut(s) 121, 416, 488, 1019, 1509, 1541, 3416, 3752, 4497
Eco47III AGCGCT 1 cut(s) 3873
Eco53kI GAGCTC 1 cut(s) 849
Eco57I CTGAAG 5 cut(s) 1917, 3024, 4068, 4423, 4542
Eco88I CYCGRG 1 cut(s) 2307
EcoICRI GAGCTC 1 cut(s) 849
EcoNI CCTNNNNNAGG 4 cut(s) 699, 1527, 2081, 4515
EcoO109I RGGNCCY 3 cut(s) 1509, 3416, 4497
EcoRI GAATTC 3 cut(s) 763, 814, 3790
EcoRII CCWGG 8 cut(s) 72, 1570, 1639, 2946, 3337, 4161, 4222, 4245
EcoRV GATATC 4 cut(s) 835, 1366, 3811, 4354
EcoT14I CCWWGG 7 cut(s) 498, 676, 1173, 1410, 1942, 2186, 3498
EcoT22I ATGCAT 3 cut(s) 2109, 3481, 3886
EcoT38I GRGCYC 3 cut(s) 851, 3122, 3492
EgeI GGCGCC 1 cut(s) 1873
EheI GGCGCC 1 cut(s) 1873
ErhI CCWWGG 7 cut(s) 498, 676, 1173, 1410, 1942, 2186, 3498
Esp3I CGTCTC 1 cut(s) 2402
FalI AAGNNNNNCTT 2 cut(s) 2557, 2589
FaqI GGGAC 7 cut(s) 179, 402, 1522, 2332, 3654, 4192, 4510
FauI CCCGC 2 cut(s) 1120, 1791
FbaI TGATCA 2 cut(s) 2080, 4513
FblI GTMKAC 1 cut(s) 2774
FriOI GRGCYC 3 cut(s) 851, 3122, 3492
FspBI CTAG 9 cut(s) 15, 677, 1385, 1853, 2003, 4010, 4334, 4601, 4664
GlaI GCGC 4 cut(s) 171, 1873, 3057, 3873
GsaI CCCAGC 5 cut(s) 263, 1082, 2766, 3137, 4070
GsuI CTGGAG 5 cut(s) 555, 1250, 1623, 2661, 4206
HaeII RGCGCY 3 cut(s) 1875, 3059, 3875
HapII CCGG 6 cut(s) 414, 713, 2339, 2451, 2790, 2802
HgaI GACGC 2 cut(s) 176, 2419
HhaI GCGC 4 cut(s) 172, 1874, 3058, 3874
Hin1I GRCGYC 1 cut(s) 1872
Hin6I GCGC 4 cut(s) 170, 1872, 3056, 3872
HinP1I GCGC 4 cut(s) 170, 1872, 3056, 3872
HincII GTYRAC 5 cut(s) 453, 741, 804, 3971, 3997
HindII GTYRAC 5 cut(s) 453, 741, 804, 3971, 3997
HindIII AAGCTT 3 cut(s) 2273, 2716, 3593
HpaI GTTAAC 1 cut(s) 741
HpaII CCGG 6 cut(s) 414, 713, 2339, 2451, 2790, 2802
HphI GGTGA 7 cut(s) 403, 644, 1544, 1675, 1931, 2744, 2750
HpyCH4IV ACGT 3 cut(s) 458, 1461, 4073
HpySE526I ACGT 3 cut(s) 458, 1461, 4073
Hsp92I GRCGYC 1 cut(s) 1872
HspAI GCGC 4 cut(s) 170, 1872, 3056, 3872
KasI GGCGCC 1 cut(s) 1871
Ksp22I TGATCA 2 cut(s) 2080, 4513
KspAI GTTAAC 1 cut(s) 741
LguI GCTCTTC 5 cut(s) 594, 903, 1643, 3848, 4604
LmnI GCTCC 4 cut(s) 502, 854, 3502, 3830
Lsp1109I GCAGC 9 cut(s) 1451, 1502, 1807, 1960, 1973, 2917, 4490, 4528, 4540
MaeI CTAG 9 cut(s) 15, 677, 1385, 1853, 2003, 4010, 4334, 4601, 4664
MaeII ACGT 3 cut(s) 458, 1461, 4073
MaeIII GTNAC 9 cut(s) 290, 348, 913, 1093, 1183, 1198, 2707, 4081, 4186
MfeI CAATTG 2 cut(s) 314, 3465
MflI RGATCY 1 cut(s) 2518
MhlI GDGCHC 3 cut(s) 851, 3122, 3492
MlsI TGGCCA 1 cut(s) 2630
MluNI TGGCCA 1 cut(s) 2630
Mly113I GGCGCC 1 cut(s) 1872
MlyI GAGTC 8 cut(s) 1960, 2186, 2476, 2749, 3204, 3278, 3308, 4046
MmeI TCCRAC 4 cut(s) 1173, 1446, 1669, 4627
Mox20I TGGCCA 1 cut(s) 2630
Mph1103I ATGCAT 3 cut(s) 2109, 3481, 3886
MroXI GAANNNNTTC 5 cut(s) 407, 1448, 1767, 3407, 4436
MscI TGGCCA 1 cut(s) 2630
MslI CAYNNNNRTG 1 cut(s) 2202
Msp20I TGGCCA 1 cut(s) 2630
MspA1I CMGCKG 2 cut(s) 176, 618
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 6 cut(s) 414, 713, 2339, 2451, 2790, 2802
MspR9I CCNGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
MunI CAATTG 2 cut(s) 314, 3465
Mva1269I GAATGC 1 cut(s) 3479
MvaI CCWGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
MvnI CGCG 2 cut(s) 170, 1786
NarI GGCGCC 1 cut(s) 1872
NheI GCTAGC 1 cut(s) 14
NmuCI GTSAC 3 cut(s) 913, 1198, 4186
NsiI ATGCAT 3 cut(s) 2109, 3481, 3886
NspI RCATGY 3 cut(s) 39, 2107, 4553
NspV TTCGAA 1 cut(s) 901
PaeI GCATGC 1 cut(s) 4553
PagI TCATGA 1 cut(s) 2170
PaqCI CACCTGC 2 cut(s) 308, 1409
PciI ACATGT 1 cut(s) 35
PciSI GCTCTTC 5 cut(s) 594, 903, 1643, 3848, 4604
PctI GAATGC 1 cut(s) 3479
PdmI GAANNNNTTC 5 cut(s) 407, 1448, 1767, 3407, 4436
PfeI GAWTC 8 cut(s) 672, 825, 1150, 1624, 2127, 2830, 3801, 4138
PflFI GACNNNGTC 1 cut(s) 3287
PflMI CCANNNNNTGG 3 cut(s) 212, 578, 3086
PfoI TCCNGGA 2 cut(s) 1639, 4222
PinAI ACCGGT 2 cut(s) 413, 2789
PleI GAGTC 8 cut(s) 1959, 2185, 2476, 2749, 3203, 3278, 3308, 4046
PluTI GGCGCC 1 cut(s) 1875
PpsI GAGTC 8 cut(s) 1959, 2185, 2476, 2749, 3203, 3278, 3308, 4046
PpuMI RGGWCCY 3 cut(s) 1509, 3416, 4497
PscI ACATGT 1 cut(s) 35
PshBI ATTAAT 3 cut(s) 1709, 3276, 3887
PsiI TTATAA 1 cut(s) 4670
Psp124BI GAGCTC 1 cut(s) 851
Psp1406I AACGTT 1 cut(s) 4073
Psp5II RGGWCCY 3 cut(s) 1509, 3416, 4497
Psp6I CCWGG 8 cut(s) 72, 1570, 1639, 2946, 3337, 4161, 4222, 4245
PspFI CCCAGC 5 cut(s) 259, 1078, 2762, 3133, 4066
PspGI CCWGG 8 cut(s) 72, 1570, 1639, 2946, 3337, 4161, 4222, 4245
PspOMI GGGCCC 1 cut(s) 3488
PspPPI RGGWCCY 3 cut(s) 1509, 3416, 4497
PstI CTGCAG 2 cut(s) 1237, 1987
PstNI CAGNNNCTG 4 cut(s) 300, 1577, 1685, 3940
PsuI RGATCY 1 cut(s) 2518
PsyI GACNNNGTC 1 cut(s) 3287
PvuII CAGCTG 1 cut(s) 618
RsaI GTAC 4 cut(s) 1102, 2196, 2584, 3154
RsaNI GTAC 4 cut(s) 1101, 2195, 2583, 3153
RseI CAYNNNNRTG 1 cut(s) 2202
SacI GAGCTC 1 cut(s) 851
SapI GCTCTTC 5 cut(s) 594, 903, 1643, 3848, 4604
SchI GAGTC 8 cut(s) 1960, 2186, 2476, 2749, 3204, 3278, 3308, 4046
ScrFI CCNGG 8 cut(s) 74, 1572, 1641, 2948, 3339, 4163, 4224, 4247
SduI GDGCHC 3 cut(s) 851, 3122, 3492
SfcI CTRYAG 3 cut(s) 277, 1233, 1983
SfoI GGCGCC 1 cut(s) 1873
SfuI TTCGAA 1 cut(s) 901
SinI GGWCC 9 cut(s) 121, 416, 488, 1019, 1509, 1541, 3416, 3752, 4497
SmiMI CAYNNNNRTG 1 cut(s) 2202
SmlI CTYRAG 6 cut(s) 515, 748, 3045, 3515, 4210, 4253
SmoI CTYRAG 6 cut(s) 515, 748, 3045, 3515, 4210, 4253
SphI GCATGC 1 cut(s) 4553
SsiI CCGC 8 cut(s) 137, 176, 234, 922, 1127, 1784, 2605, 3050
SspDI GGCGCC 1 cut(s) 1871
SspI AATATT 4 cut(s) 1713, 2221, 3027, 3913
SspMI CTAG 9 cut(s) 15, 677, 1385, 1853, 2003, 4010, 4334, 4601, 4664
SstI GAGCTC 1 cut(s) 851
StyD4I CCNGG 8 cut(s) 72, 1570, 1639, 2946, 3337, 4161, 4222, 4245
StyI CCWWGG 7 cut(s) 498, 676, 1173, 1410, 1942, 2186, 3498
TaiI ACGT 3 cut(s) 461, 1464, 4076
TatI WGTACW 4 cut(s) 1100, 2194, 2582, 3152
TauI GCSGC 3 cut(s) 140, 924, 2608
TfiI GAWTC 8 cut(s) 672, 825, 1150, 1624, 2127, 2830, 3801, 4138
TseFI GTSAC 3 cut(s) 913, 1198, 4186
TseI GCWGC 9 cut(s) 1439, 1515, 1820, 1961, 1973, 2905, 4503, 4541, 4553
Tsp45I GTSAC 3 cut(s) 913, 1198, 4186
TspGWI ACGGA 1 cut(s) 134
Tth111I GACNNNGTC 1 cut(s) 3287
Van91I CCANNNNNTGG 3 cut(s) 212, 578, 3086
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 9 cut(s) 121, 416, 488, 1019, 1509, 1541, 3416, 3752, 4497
VspI ATTAAT 3 cut(s) 1709, 3276, 3887
XagI CCTNNNNNAGG 4 cut(s) 699, 1527, 2081, 4515
XceI RCATGY 3 cut(s) 39, 2107, 4553
XmaJI CCTAGG 1 cut(s) 676
XmiI GTMKAC 1 cut(s) 2774
XmnI GAANNNNTTC 5 cut(s) 407, 1448, 1767, 3407, 4436
XspI CTAG 9 cut(s) 15, 677, 1385, 1853, 2003, 4010, 4334, 4601, 4664
Zsp2I ATGCAT 3 cut(s) 2109, 3481, 3886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.