MD05G1261000.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000088
Physical Location & Seq
Reverse (-)
39610435 .. 39614209
3775 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1261000.v1.1.491

Sequence Viewer

Length: 1260 bp
ATGCAAGATTCAGCCAGTCGGAATATAAGGGTTGGCCGTTTAGTTTCACGCCGTCGAGGAGAGCAAGTTCTGCACATTTACAATATGAAGATGAAGTTGATGATGAGGATACTATTACTCTGCTTCCTCAGCCGCTTCTGGTTTCAGCTGTCCTTTGCTAAAAATGCTACCACTGATCCATCTGAAGTGAGGGCGTTGAACTCAATATTTGAACAATGGGACACACAAGCAGTGTCGGGACTGTGGAATACCAGTGGAGAACCCTGCAGTGGATCTGCCATCAACGGCACCGAATTTGAGATCCCCGATAACAACCCAGCCATCGCTTGCGACTGTACTTATGACAACGATACTACATGCCACATCACCAAACTGAGAGTGCATGCTCTGTACAAACGAGGGGTGTTTCCAGAAGAATTTTTGGATCTAAGATATCTCGCAGTTTTGAAAATTGATATGAATTATTTCAAAGGTCCCCTACCGGGATTCATTGGCAATATGTCTGCATTGATTATATTGTCAATTGGCCACAATTCATTCTCTGGGCCCATCCCCAAGGAGCTTGGAAACCTTACGGAGCTAAATATGCTGGCCATCGGATCAAATAATTTCTCCGGAACACTCCCTCCAGAACTTGGTAATTTAGTCAAGCTCCAGCAAATTTACATGGACAGCTGTGGACTCAGTGGTGAAATTCCTTCAACATTTGCCAAGCTCACCAGTATGCAAATCTTTTGGGCAACGGACAGTCTTTTCTCAGGAAAGATACCTGATTTCATAGGGAATTGGACACAACTCACTTCTTTGCATATCAGTGATATATACGATGGGAGCTCCTCTCTTGATTTCATTAAAAAAATGAAGAACTTGACTGAATTAAAACTACGAAATGCATTAATCACTGGTACCATCCCATCTGATATTGGAGAATATCAAAGTCTACAGATACTGGATCTGAGTTTCAACAATTTGATAGGCCAACTCCCAAGTTCTTTGTTCACCTTGAGTTCTCTTACATCCTTGTTTCTTGGAAACAATAGTCTGTCCGGACCTCTTCCGAGCCAAAAGAGCAATCGACTTCAAACTATAGATTTGTCTTACAATTTTTTATCAGGTAGCTTTCCCCAGTGGGTGACCACAATATCGCAACTGTACATCACCTTTTATCTTTCACCTTCATTTTACAGTTTAAATCCCCAGAATATGTTGGGACAAAAAATATCACTGCGATTCGTTCTCACAGTGCTACTTGCCTATTAA

Protein Analysis

420

Amino Acids

46.8

Weight (kDa)

6.95

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 207 - 294 2.9e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 905
AccB1I GGYRCC 2 cut(s) 287, 905
AccB7I CCANNNNNTGG 1 cut(s) 635
AccI GTMKAC 1 cut(s) 940
AccIII TCCGGA 2 cut(s) 614, 1046
AciI CCGC 1 cut(s) 133
AclWI GGATC 6 cut(s) 170, 280, 295, 432, 607, 960
AcoI YGGCCR 3 cut(s) 34, 526, 591
AcsI RAATTY 4 cut(s) 293, 416, 660, 693
AcuI CTGAAG 1 cut(s) 204
AfaI GTAC 4 cut(s) 337, 392, 907, 1154
AfiI CCNNNNNNNGG 3 cut(s) 269, 482, 635
AgsI TTSAA 7 cut(s) 199, 212, 448, 469, 702, 964, 1082
AloI GAACNNNNNNTCC 4 cut(s) 51, 83, 610, 642
AluBI AGCT 8 cut(s) 148, 562, 580, 652, 675, 715, 834, 1119
AluI AGCT 8 cut(s) 148, 562, 580, 652, 675, 715, 834, 1119
Alw21I GWGCWC 1 cut(s) 836
AlwI GGATC 6 cut(s) 170, 280, 295, 432, 607, 960
AlwNI CAGNNNCTG 1 cut(s) 949
Aor13HI TCCGGA 2 cut(s) 614, 1046
AoxI GGCC 5 cut(s) 34, 526, 545, 591, 976
ApaI GGGCCC 1 cut(s) 549
ApoI RAATTY 4 cut(s) 293, 416, 660, 693
AseI ATTAAT 1 cut(s) 896
Asp700I GAANNNNTTC 1 cut(s) 464
Asp718I GGTACC 1 cut(s) 905
AspS9I GGNCC 4 cut(s) 473, 545, 546, 1049
AsuC2I CCSGG 1 cut(s) 483
AsuHPI GGTGA 7 cut(s) 358, 701, 709, 991, 1144, 1150, 1164
AvaII GGWCC 2 cut(s) 473, 1049
BaeGI GKGCMC 1 cut(s) 549
BalI TGGCCA 2 cut(s) 528, 593
BanI GGYRCC 2 cut(s) 287, 905
BanII GRGCYC 2 cut(s) 549, 836
Bbv12I GWGCWC 1 cut(s) 836
BbvCI CCTCAGC 1 cut(s) 128
BccI CCATC 8 cut(s) 187, 287, 329, 557, 602, 821, 917, 922
BceAI ACGGC 3 cut(s) 21, 36, 301
BciVI GTATCC 1 cut(s) 102
BcnI CCSGG 1 cut(s) 483
BfmI CTRYAG 3 cut(s) 265, 941, 1086
BfuI GTATCC 1 cut(s) 102
BisI GCNGC 1 cut(s) 133
BlsI GCNGC 1 cut(s) 134
Bme1390I CCNGG 1 cut(s) 483
Bme18I GGWCC 2 cut(s) 473, 1049
BmgT120I GGNCC 4 cut(s) 473, 545, 546, 1049
BmiI GGNNCC 4 cut(s) 289, 475, 547, 907
BmrFI CCNGG 1 cut(s) 483
BmrI ACTGGG 1 cut(s) 1120
BmuI ACTGGG 1 cut(s) 1120
BplI GAGNNNNNCTC 2 cut(s) 823, 855
BpmI CTGGAG 2 cut(s) 612, 638
Bpu10I CCTNAGC 1 cut(s) 128
BpuEI CTTGAG 1 cut(s) 1024
BpuMI CCSGG 1 cut(s) 483
BsaJI CCNNGG 1 cut(s) 555
BsaWI WCCGGW 2 cut(s) 614, 1046
BsaXI ACNNNNNCTCC 4 cut(s) 51, 81, 610, 640
Bsc4I CCNNNNNNNGG 3 cut(s) 269, 482, 635
Bse1I ACTGG 6 cut(s) 15, 252, 720, 907, 954, 1126
BseAI TCCGGA 2 cut(s) 614, 1046
BseDI CCNNGG 1 cut(s) 555
BseGI GGATG 3 cut(s) 549, 909, 1016
BseLI CCNNNNNNNGG 3 cut(s) 269, 482, 635
BseMII CTCAG 5 cut(s) 142, 365, 697, 771, 947
BseNI ACTGG 6 cut(s) 15, 252, 720, 907, 954, 1126
BseRI GAGGAG 2 cut(s) 72, 826
BseSI GKGCMC 1 cut(s) 549
BseYI CCCAGC 1 cut(s) 316
BsgI GTGCAG 1 cut(s) 56
BshFI GGCC 5 cut(s) 36, 528, 547, 593, 978
BshNI GGYRCC 2 cut(s) 287, 905
BsiHKAI GWGCWC 1 cut(s) 836
BsiSI CCGG 3 cut(s) 482, 615, 1047
BslFI GGGAC 4 cut(s) 233, 252, 459, 1224
BslI CCNNNNNNNGG 3 cut(s) 269, 482, 635
BsmFI GGGAC 4 cut(s) 233, 252, 459, 1224
BsnI GGCC 5 cut(s) 36, 528, 547, 593, 978
Bsp120I GGGCCC 1 cut(s) 545
Bsp1286I GDGCHC 2 cut(s) 549, 836
Bsp13I TCCGGA 2 cut(s) 614, 1046
Bsp1407I TGTACA 2 cut(s) 390, 1152
Bsp143I GATC 6 cut(s) 175, 272, 300, 424, 599, 952
BspACI CCGC 1 cut(s) 133
BspANI GGCC 5 cut(s) 36, 528, 547, 593, 978
BspCNI CTCAG 5 cut(s) 141, 366, 696, 770, 948
BspEI TCCGGA 2 cut(s) 614, 1046
BspLI GGNNCC 4 cut(s) 289, 475, 547, 907
BspMAI CTGCAG 1 cut(s) 269
BspPI GGATC 6 cut(s) 170, 280, 295, 432, 607, 960
BspT107I GGYRCC 2 cut(s) 287, 905
BsrGI TGTACA 2 cut(s) 390, 1152
BsrI ACTGG 6 cut(s) 15, 252, 720, 907, 954, 1126
BssECI CCNNGG 1 cut(s) 555
BssMI GATC 6 cut(s) 175, 272, 300, 424, 599, 952
BssT1I CCWWGG 1 cut(s) 555
Bst4CI ACNGT 6 cut(s) 243, 335, 749, 1152, 1187, 1243
Bst6I CTCTTC 1 cut(s) 1059
BstAPI GCANNNNNTGC 1 cut(s) 70
BstAUI TGTACA 2 cut(s) 390, 1152
BstC8I GCNNGC 3 cut(s) 328, 384, 591
BstDEI CTNAG 6 cut(s) 128, 374, 428, 683, 757, 956
BstEII GGTNACC 1 cut(s) 1132
BstF5I GGATG 3 cut(s) 549, 909, 1016
BstKTI GATC 6 cut(s) 178, 275, 303, 427, 602, 955
BstMBI GATC 6 cut(s) 175, 272, 300, 424, 599, 952
BstMWI GCNNNNNNNGC 5 cut(s) 70, 129, 164, 586, 1068
BstNSI RCATGY 2 cut(s) 360, 386
BstPI GGTNACC 1 cut(s) 1132
BstSCI CCNGG 1 cut(s) 481
BstSFI CTRYAG 3 cut(s) 265, 941, 1086
BstSLI GKGCMC 1 cut(s) 549
BstX2I RGATCY 4 cut(s) 272, 300, 424, 952
BstYI RGATCY 4 cut(s) 272, 300, 424, 952
BsuI GTATCC 1 cut(s) 102
BsuRI GGCC 5 cut(s) 36, 528, 547, 593, 978
BtgZI GCGATG 1 cut(s) 307
BtsCI GGATG 3 cut(s) 549, 909, 1016
BtsI GCAGTG 3 cut(s) 237, 274, 1223
Cac8I GCNNGC 3 cut(s) 328, 384, 591
CaiI CAGNNNCTG 1 cut(s) 949
Cfr13I GGNCC 4 cut(s) 473, 545, 546, 1049
Csp6I GTAC 4 cut(s) 336, 391, 906, 1153
CviAII CATG 3 cut(s) 357, 383, 667
CviQI GTAC 4 cut(s) 336, 391, 906, 1153
DdeI CTNAG 6 cut(s) 128, 374, 428, 683, 757, 956
DpnI GATC 6 cut(s) 177, 274, 302, 426, 601, 954
DpnII GATC 6 cut(s) 175, 272, 300, 424, 599, 952
DraI TTTAAA 1 cut(s) 1191
EaeI YGGCCR 3 cut(s) 34, 526, 591
Eam1104I CTCTTC 1 cut(s) 1059
EarI CTCTTC 1 cut(s) 1059
Ecl136II GAGCTC 1 cut(s) 834
Eco130I CCWWGG 1 cut(s) 555
Eco24I GRGCYC 2 cut(s) 549, 836
Eco32I GATATC 1 cut(s) 434
Eco47I GGWCC 2 cut(s) 473, 1049
Eco53kI GAGCTC 1 cut(s) 834
Eco57I CTGAAG 1 cut(s) 204
Eco91I GGTNACC 1 cut(s) 1132
EcoICRI GAGCTC 1 cut(s) 834
EcoO109I RGGNCCY 1 cut(s) 473
EcoO65I GGTNACC 1 cut(s) 1132
EcoRV GATATC 1 cut(s) 434
EcoT14I CCWWGG 1 cut(s) 555
EcoT22I ATGCAT 1 cut(s) 895
EcoT38I GRGCYC 2 cut(s) 549, 836
ErhI CCWWGG 1 cut(s) 555
FaeI CATG 3 cut(s) 360, 386, 670
FaqI GGGAC 4 cut(s) 233, 252, 459, 1224
FatI CATG 3 cut(s) 356, 382, 666
FblI GTMKAC 1 cut(s) 940
Fnu4HI GCNGC 1 cut(s) 133
FokI GGATG 3 cut(s) 536, 896, 1003
FriOI GRGCYC 2 cut(s) 549, 836
Fsp4HI GCNGC 1 cut(s) 133
GluI GCNGC 1 cut(s) 133
GsaI CCCAGC 1 cut(s) 320
GsuI CTGGAG 2 cut(s) 612, 638
HaeIII GGCC 5 cut(s) 36, 528, 547, 593, 978
HapII CCGG 3 cut(s) 482, 615, 1047
Hin1II CATG 3 cut(s) 360, 386, 670
HinfI GANTC 4 cut(s) 8, 486, 681, 1230
HpaII CCGG 3 cut(s) 482, 615, 1047
HphI GGTGA 7 cut(s) 358, 701, 709, 991, 1144, 1150, 1164
Hpy166II GTNNAC 3 cut(s) 680, 941, 999
Hpy188I TCNGA 6 cut(s) 21, 184, 599, 919, 957, 1059
Hpy188III TCNNGA 7 cut(s) 237, 410, 615, 629, 759, 842, 1047
Hpy8I GTNNAC 3 cut(s) 680, 941, 999
Hpy99I CGWCG 1 cut(s) 57
HpyAV CCTTC 2 cut(s) 708, 1185
HpyCH4III ACNGT 6 cut(s) 243, 335, 749, 1152, 1187, 1243
HpyCH4V TGCA 8 cut(s) 4, 73, 267, 382, 506, 727, 808, 893
HpyF10VI GCNNNNNNNGC 5 cut(s) 70, 129, 164, 586, 1068
HpyF3I CTNAG 6 cut(s) 128, 374, 428, 683, 757, 956
Hsp92II CATG 3 cut(s) 360, 386, 670
Kpn2I TCCGGA 2 cut(s) 614, 1046
KpnI GGTACC 1 cut(s) 909
Kzo9I GATC 6 cut(s) 175, 272, 300, 424, 599, 952
LmnI GCTCC 5 cut(s) 559, 577, 657, 831, 839
MaeIII GTNAC 1 cut(s) 1132
MalI GATC 6 cut(s) 177, 274, 302, 426, 601, 954
MboI GATC 6 cut(s) 175, 272, 300, 424, 599, 952
MboII GAAGA 4 cut(s) 100, 425, 874, 1046
MfeI CAATTG 1 cut(s) 522
MflI RGATCY 4 cut(s) 272, 300, 424, 952
MhlI GDGCHC 2 cut(s) 549, 836
MlsI TGGCCA 2 cut(s) 528, 593
MluNI TGGCCA 2 cut(s) 528, 593
MlyI GAGTC 1 cut(s) 675
MnlI CCTC 8 cut(s) 50, 99, 137, 183, 392, 636, 847, 1062
Mox20I TGGCCA 2 cut(s) 528, 593
Mph1103I ATGCAT 1 cut(s) 895
MroI TCCGGA 2 cut(s) 614, 1046
MroXI GAANNNNTTC 1 cut(s) 464
MscI TGGCCA 2 cut(s) 528, 593
MseI TTAA 5 cut(s) 852, 878, 896, 1190, 1258
MslI CAYNNNNRTG 2 cut(s) 722, 813
Msp20I TGGCCA 2 cut(s) 528, 593
MspA1I CMGCKG 2 cut(s) 148, 675
MspI CCGG 3 cut(s) 482, 615, 1047
MspR9I CCNGG 1 cut(s) 483
MunI CAATTG 1 cut(s) 522
MwoI GCNNNNNNNGC 5 cut(s) 70, 129, 164, 586, 1068
NciI CCSGG 1 cut(s) 483
NdeII GATC 6 cut(s) 175, 272, 300, 424, 599, 952
NlaIII CATG 3 cut(s) 360, 386, 670
NlaIV GGNNCC 4 cut(s) 289, 475, 547, 907
NmuCI GTSAC 1 cut(s) 1132
NsiI ATGCAT 1 cut(s) 895
NspI RCATGY 2 cut(s) 360, 386
PaeI GCATGC 1 cut(s) 386
PdmI GAANNNNTTC 1 cut(s) 464
PfeI GAWTC 3 cut(s) 8, 486, 1230
PflMI CCANNNNNTGG 1 cut(s) 635
PkrI GCNGC 1 cut(s) 134
PleI GAGTC 1 cut(s) 675
PpsI GAGTC 1 cut(s) 675
PpuMI RGGWCCY 1 cut(s) 473
PshBI ATTAAT 1 cut(s) 896
Psp124BI GAGCTC 1 cut(s) 836
Psp5II RGGWCCY 1 cut(s) 473
PspEI GGTNACC 1 cut(s) 1132
PspFI CCCAGC 1 cut(s) 316
PspN4I GGNNCC 4 cut(s) 289, 475, 547, 907
PspOMI GGGCCC 1 cut(s) 545
PspPI GGNCC 4 cut(s) 473, 545, 546, 1049
PspPPI RGGWCCY 1 cut(s) 473
PstI CTGCAG 1 cut(s) 269
PstNI CAGNNNCTG 1 cut(s) 949
PsuI RGATCY 4 cut(s) 272, 300, 424, 952
PvuII CAGCTG 2 cut(s) 148, 675
RsaI GTAC 4 cut(s) 337, 392, 907, 1154
RsaNI GTAC 4 cut(s) 336, 391, 906, 1153
RseI CAYNNNNRTG 2 cut(s) 722, 813
SacI GAGCTC 1 cut(s) 836
SaqAI TTAA 5 cut(s) 852, 878, 896, 1190, 1258
SatI GCNGC 1 cut(s) 133
Sau3AI GATC 6 cut(s) 175, 272, 300, 424, 599, 952
Sau96I GGNCC 4 cut(s) 473, 545, 546, 1049
SchI GAGTC 1 cut(s) 675
ScrFI CCNGG 1 cut(s) 483
SduI GDGCHC 2 cut(s) 549, 836
SfcI CTRYAG 3 cut(s) 265, 941, 1086
SinI GGWCC 2 cut(s) 473, 1049
SmiMI CAYNNNNRTG 2 cut(s) 722, 813
SmlI CTYRAG 1 cut(s) 1003
SmoI CTYRAG 1 cut(s) 1003
SphI GCATGC 1 cut(s) 386
SsiI CCGC 1 cut(s) 133
SspI AATATT 1 cut(s) 207
SstI GAGCTC 1 cut(s) 836
StyD4I CCNGG 1 cut(s) 481
StyI CCWWGG 1 cut(s) 555
TaaI ACNGT 6 cut(s) 243, 335, 749, 1152, 1187, 1243
TaqI TCGA 2 cut(s) 55, 1075
TatI WGTACW 3 cut(s) 335, 390, 1152
TauI GCSGC 1 cut(s) 135
TfiI GAWTC 3 cut(s) 8, 486, 1230
Tru1I TTAA 5 cut(s) 852, 878, 896, 1190, 1258
Tru9I TTAA 5 cut(s) 852, 878, 896, 1190, 1258
TseFI GTSAC 1 cut(s) 1132
Tsp45I GTSAC 1 cut(s) 1132
TspDTI ATGAA 9 cut(s) 101, 107, 473, 478, 525, 766, 838, 875, 1167
TspGWI ACGGA 2 cut(s) 590, 758
Van91I CCANNNNNTGG 1 cut(s) 635
VpaK11BI GGWCC 2 cut(s) 473, 1049
VspI ATTAAT 1 cut(s) 896
XapI RAATTY 4 cut(s) 293, 416, 660, 693
XceI RCATGY 2 cut(s) 360, 386
XmiI GTMKAC 1 cut(s) 940
XmnI GAANNNNTTC 1 cut(s) 464
Zsp2I ATGCAT 1 cut(s) 895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.