Rroxscaffold_1G00007560
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
9688211 .. 9698282
10072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00007560.1

Sequence Viewer

Length: 3222 bp
ATGTATGGACTATCGAGGGTCCTTGCCACCTTTCTCATATCTCTGGGATTTGACTTTCGGCTTTTCACTGAATTCAACTTTGCGGCCTGCAGCATATTCATCTCTGGGTTTGTTGCACAAGCTCAACCCACAACAGATCCATCTGAAGTGAGAGCGCTGGATGCAATCTTTCAGAAATGGAATGTAACAGCCAATACGAAGCAATGGAACACAACTGGTGACCCATGCAGTGGACTTGCGGTAGATGAAGCTGATGACACTGGTTATTTCTTTAACGAAGATAATGATTACAATCCCTTCGTCAAATGCAACTGTTCTTCTGTTACAAACTCAACTTGCCACATTACCCAACTGAAAGTATCTACTTTGGACATTGTTGCTCCAATTCCAGAAGAGCTCTATGCTTTGACTTTCCTTCAATATCTGAATGTGGAAAAAAATTACTTGACAGGACCTATCTCTGCATCAATTGGAAATCTAACCAGCATCACATACTTGAACTTGGGACACAATGACTTATCAGGTGAACTACCAACGGAAATTGCAAAACTCACCAATTTGACATTCTTGGCTGTTGGGACACTCAACCTTTCTGGTTCTCTGCCACCTGAGATAGGGTCTTTAAAAACAATAAAAAAGATTTTCATTGATAATTCTGGACTTAGCGGTGAGATTCCACCAACATTTGCTAATCTAACGAACTTGGAAACATTTTGGGCAACAGATACAAACCTCACTGGCAGGATACCGGATTTTGTAGGAGATTGGACAAAGCTTACTACCTTGTTGACTCTTTTGACAGAGCTGCGAATTACTGATTTAACGATTGCCAATGACAACTCTTCTCTTGGATTTATCAACAATATGACGTCTCTAGAAGTCTTAATGCTGAGGAATAACAATATTTCTGATTCAATTCCTTCCAACATTGGAGATTACCGAAAATTGGTTCACCTGGATTTGAGCTTCAACAATTTGAATGGACAAATACCAGCCTCACTATTTGATATGAATGTGCTCGCCATTCTGTTTCTTGGAAACAATAAGTTGAATGGTAGCCTTCCTGAGTCTAAAAGCTCGTCTCTTCTTGTTGTTAACTTAGTGGCCAACAACTTCAGCATAGACAGTTCAGACAGCAGGAGGTTGGAAGGGATACTGGGAAGAGGTGGTGGAAAGCAAGAAACATCACTTAGTTCAGGGGACTCAAGTGAAGGACGAGAAGGAGGTTTTGGGTTGGAGACTTGTGATCTACCTTCAGGGTTGATTTGCCTTCAAAGGGGCTTTCCTTGCCACCGTGGTAGACCAGTTTATTATAACTTCATGATTAACTGCGGTGGTCCTCAGGCTACGATATCCAATGGGACTGTGTATGAGAAGGACATTGAGCCCCTTGGTGCAGCTACATATTATGTGACTGACACAAACAGATGGGGAGTTAGCAATGTCGGTCTTAAAACACAGTTTGTAGCTGCATCATATTTGACTGGGACCAACATTCCAAAGTATACAATATCCACTTCATCTCCAATCGGAAATACTTCAGACCCTACGCTATTTCAGAGTGCAAGGATCTCTGCTTCATCACTCAGATACTATGGCTTGGGTCTTGAGAATGGAAACTATACCGTGAAGCTTGAATTTGCAGAACAAGCTATCCTAGATACTCCTACAAGAAAAAGTCTTGGAAGACGTGTGTTTGATATATATATCCAGGACGTTCTTGTTGTTAAAGATTTTGATATACGAAAGGAGACAAATAGGACATCTTTGCTAGCTATTGAAAAGGTATACAATGCTCAGGTGGTTTCAGAGAATTACCTTGAAATCCATTTCTTCTGGGCTGGAAAGGGGACTTGCTGCATACCAGAGGAGGGTACATATGGACCTCTTATTTCAGCCATCAGTGCTACACCTGAATTCATACCTACCGTCAGCAACAAGCTGCCAAGTATTAAGAAGAATAGGACTGGGCTGATTGTGGGAATTGTTGTTGGTGGTGGAGTTTTAATTCTGGTGGTGCTGCTTTTCTATATTGTTCAAAGAAGAAAGAGGAGCAACACCGATGATGACTATGATGAAGAGCTATTGGGGATAGATCTTGGACCTCTCACTTTCAGTTTTTCTGAACTGAAGGCAGCTACAAATGACTTTAGTCCAGATAATAAGCTTGGAGAGGGAGGATTTGGGCCTGTCTTCAAAGGTACTCTAAATGATGGAAGAGTAATTGCCGTAAAACAATTGTCTGCATCATCCCACCAAGGAAAGAGCCAGTTTGTGACTGAGATTGCCACTATATCTTCTGTGCGACACAATAACCTAGTAAATTTGTATGGATTCTGCACCGAGGGAGCTAAACGGCTCCTTGTCTATGAGTATCTGGAGAACAAGAGTCTTGATCAAGCATTATTTGGAAAAAGAACCTTGCATCTTGATTGGCAGACACGTTTTGATATATGCTTGGGCGTAGCTAGAGGTTTAACTTATCTTCATGAAGAATCAAGGCTTCGAATTGTACACAGAGATGTGAAGGCAAGTAACATTCTGCTTGACTCTAATCTCATTGCCAAAATATCAGATTTTGGTTTGGCGAAGCATTATGATGATAAAAAAACCCACATGAGTACTCGGGTTGCTGGAACAATTGGGTATCTTGCACCGGAATATGCTATGCGTGGACACCTGACAGAGAAGACCGATGTGTTTGCCTATGGTGTTGTCATTCTAGAAATTGTCAGCGGTAGGCCAAATTCTGATCCAAGTTTGGAAGGCGATATGGTTTATCTTCTTGAATTGGCTTGGAGCTTGCATGAAAACAAACGTGAAGTTGATCTAGTAGACTCTAGATTATCCGAATTCAATGAGGAAGAAGCAAGACGAATTATCAACATAGGACTTTTGTGCACTCAATCATCACCAATGCTACGACCACCTATGTCTCGCGTGATCGGAATGCTTGCAGGAGATATTGAAGTGACTTCTGCTATTTCAAAGCCCGGTTACTTGACAGACTGGAGATTTGATGATGTAACTACTATCACCAGCCAAACGAAATTTGGTGATGGGAGTACTGGCAACAGTCTAGGAACTGATATGTCAACTAGAGGAACTGACTTCAGCTTTTACAACTCATCGGCAAGTACAAGCGTGTTGGGGAATGCAGGGCAATTACCTTCAAATGCTACTCTTCCCATACTCAATAATACAAATGGTGATGGTAGATGA

Protein Analysis

1073

Amino Acids

117.49

Weight (kDa)

5.17

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 153 - 269 1.2e-10 Leucine-rich repeat region
Malectin PF11721 440 - 634 1.2e-39 Malectin domain
PK_Tyr_Ser-Thr PF07714 720 - 982 1.4e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 720 - 917 2.7e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1314
AatII GACGTC 1 cut(s) 872
AccB7I CCANNNNNTGG 1 cut(s) 230
AccI GTMKAC 4 cut(s) 1300, 1505, 1788, 2835
AccII CGCG 1 cut(s) 2940
AciI CCGC 5 cut(s) 83, 239, 666, 1332, 2736
AclWI GGATC 3 cut(s) 131, 1577, 2747
AcoI YGGCCR 1 cut(s) 1104
AcsI RAATTY 7 cut(s) 71, 1637, 1916, 2323, 2746, 2852, 3050
AcuI CTGAAG 6 cut(s) 165, 1099, 1239, 1524, 2150, 3097
AcyI GRCGYC 1 cut(s) 869
AfaI GTAC 6 cut(s) 1876, 2203, 2514, 2623, 3067, 3139
AfeI AGCGCT 1 cut(s) 156
AfiI CCNNNNNNNGG 5 cut(s) 230, 614, 946, 1276, 1871
AflIII ACRYGT 2 cut(s) 1690, 2441
AjiI CACGTC 1 cut(s) 1691
AjnI CCWGG 2 cut(s) 954, 1710
AjuI GAANNNNNNNTTGG 4 cut(s) 548, 580, 1212, 1244
AloI GAACNNNNNNTCC 2 cut(s) 1638, 1670
Alw21I GWGCWC 3 cut(s) 399, 1020, 2903
Alw26I GTCTC 5 cut(s) 876, 1086, 1232, 1745, 2940
Alw44I GTGCAC 1 cut(s) 2899
AlwI GGATC 3 cut(s) 131, 1577, 2747
Ama87I CYCGRG 1 cut(s) 2625
Aor51HI AGCGCT 1 cut(s) 156
AoxI GGCC 4 cut(s) 84, 1104, 2186, 2741
ApaLI GTGCAC 1 cut(s) 2899
ApeKI GCWGC 8 cut(s) 90, 805, 1397, 1469, 1857, 1942, 2020, 2135
ApoI RAATTY 7 cut(s) 71, 1637, 1916, 2323, 2746, 2852, 3050
ArsI GACNNNNNNTTYG 2 cut(s) 2999, 3031
Asp700I GAANNNNTTC 1 cut(s) 1537
AspLEI GCGC 1 cut(s) 157
AspS9I GGNCC 7 cut(s) 19, 452, 1337, 1488, 1883, 2102, 2186
AsuC2I CCSGG 1 cut(s) 2994
AsuHPI GGTGA 9 cut(s) 230, 536, 544, 680, 944, 2904, 3028, 3068, 3221
AsuII TTCGAA 1 cut(s) 2506
AsuNHI GCTAGC 1 cut(s) 1771
AvaI CYCGRG 1 cut(s) 2625
AvaII GGWCC 6 cut(s) 19, 452, 1337, 1488, 1883, 2102
AxyI CCTNAGG 1 cut(s) 1341
BaeGI GKGCMC 1 cut(s) 2903
BalI TGGCCA 1 cut(s) 1106
BanII GRGCYC 2 cut(s) 399, 1389
BbsI GAAGAC 3 cut(s) 1693, 2185, 2696
Bbv12I GWGCWC 3 cut(s) 399, 1020, 2903
BbvCI CCTCAGC 1 cut(s) 890
BbvI GCAGC 8 cut(s) 102, 792, 1409, 1456, 1844, 1929, 2007, 2147
BccI CCATC 6 cut(s) 148, 1422, 1907, 2207, 3053, 3206
BceAI ACGGC 2 cut(s) 2213, 2372
BcgI CGANNNNNNTGC 2 cut(s) 2684, 2718
BciT130I CCWGG 2 cut(s) 956, 1712
BciVI GTATCC 2 cut(s) 738, 1146
BclI TGATCA 1 cut(s) 2395
BcnI CCSGG 1 cut(s) 2994
BcoDI GTCTC 5 cut(s) 876, 1086, 1232, 1745, 2940
BfmI CTRYAG 1 cut(s) 88
BfoI RGCGCY 1 cut(s) 158
BfuI GTATCC 2 cut(s) 738, 1146
BglII AGATCT 1 cut(s) 2095
BisI GCNGC 9 cut(s) 84, 91, 806, 1398, 1470, 1858, 1943, 2021, 2136
BlsI GCNGC 9 cut(s) 85, 92, 807, 1399, 1471, 1859, 1944, 2022, 2137
BmcAI AGTACT 2 cut(s) 2623, 3067
Bme1390I CCNGG 3 cut(s) 956, 1712, 2994
Bme18I GGWCC 6 cut(s) 19, 452, 1337, 1488, 1883, 2102
BmeT110I CYCGRG 1 cut(s) 2625
BmgBI CACGTC 1 cut(s) 1691
BmgT120I GGNCC 7 cut(s) 19, 452, 1337, 1488, 1883, 2102, 2186
BmiI GGNNCC 3 cut(s) 20, 1489, 2360
BmrFI CCNGG 3 cut(s) 956, 1712, 2994
BmrI ACTGGG 3 cut(s) 1166, 1494, 1977
BmsI GCATC 6 cut(s) 151, 473, 495, 1481, 2255, 2434
BmtI GCTAGC 1 cut(s) 1775
BmuI ACTGGG 3 cut(s) 1166, 1494, 1977
BoxI GACNNNNGTC 1 cut(s) 2151
BpiI GAAGAC 3 cut(s) 1693, 2185, 2696
BpmI CTGGAG 2 cut(s) 2399, 3031
Bpu10I CCTNAGC 2 cut(s) 890, 1797
Bpu14I TTCGAA 1 cut(s) 2506
BpuEI CTTGAG 2 cut(s) 1189, 1628
BpuMI CCSGG 1 cut(s) 2994
BsaBI GATNNNNATC 1 cut(s) 291
BsaHI GRCGYC 1 cut(s) 869
BsaJI CCNNGG 4 cut(s) 1294, 1390, 2257, 2343
BsaWI WCCGGW 2 cut(s) 748, 2656
BsaXI ACNNNNNCTCC 2 cut(s) 1507, 1537
Bsc4I CCNNNNNNNGG 5 cut(s) 230, 614, 946, 1276, 1871
Bse21I CCTNAGG 1 cut(s) 1341
Bse3DI GCAATG 3 cut(s) 209, 1447, 2559
Bse8I GATNNNNATC 1 cut(s) 291
BseBI CCWGG 2 cut(s) 956, 1712
BseDI CCNNGG 4 cut(s) 1294, 1390, 2257, 2343
BseGI GGATG 2 cut(s) 166, 2249
BseJI GATNNNNATC 1 cut(s) 291
BseLI CCNNNNNNNGG 5 cut(s) 230, 614, 946, 1276, 1871
BseMI GCAATG 3 cut(s) 209, 1447, 2559
BseMII CTCAG 7 cut(s) 600, 881, 1056, 1355, 1600, 1811, 2271
BseRI GAGGAG 2 cut(s) 1883, 2065
BseSI GKGCMC 1 cut(s) 2903
BseXI GCAGC 8 cut(s) 102, 792, 1409, 1456, 1844, 1929, 2007, 2147
BsgI GTGCAG 2 cut(s) 1416, 2323
Bsh1236I CGCG 1 cut(s) 2940
BshFI GGCC 4 cut(s) 86, 1106, 2188, 2743
BsiHKAI GWGCWC 3 cut(s) 399, 1020, 2903
BsiHKCI CYCGRG 1 cut(s) 2625
BsiSI CCGG 3 cut(s) 749, 2657, 2994
BslFI GGGAC 6 cut(s) 519, 592, 1214, 1375, 1501, 1864
BslI CCNNNNNNNGG 5 cut(s) 230, 614, 946, 1276, 1871
BsmAI GTCTC 5 cut(s) 876, 1086, 1232, 1745, 2940
BsmBI CGTCTC 2 cut(s) 876, 1086
BsmFI GGGAC 6 cut(s) 519, 592, 1214, 1375, 1501, 1864
BsmI GAATGC 2 cut(s) 2955, 3160
BsnI GGCC 4 cut(s) 86, 1106, 2188, 2743
BsoBI CYCGRG 1 cut(s) 2625
Bsp119I TTCGAA 1 cut(s) 2506
Bsp1286I GDGCHC 4 cut(s) 399, 1020, 1389, 2903
Bsp1407I TGTACA 1 cut(s) 2512
Bsp143I GATC 8 cut(s) 136, 1246, 1569, 2095, 2395, 2752, 2827, 2943
BspACI CCGC 5 cut(s) 83, 239, 666, 1332, 2736
BspANI GGCC 4 cut(s) 86, 1106, 2188, 2743
BspCNI CTCAG 7 cut(s) 601, 882, 1057, 1354, 1599, 1810, 2272
BspFNI CGCG 1 cut(s) 2940
BspHI TCATGA 2 cut(s) 1320, 2488
BspLI GGNNCC 3 cut(s) 20, 1489, 2360
BspMAI CTGCAG 1 cut(s) 92
BspOI GCTAGC 1 cut(s) 1775
BspPI GGATC 3 cut(s) 131, 1577, 2747
BspQI GCTCTTC 2 cut(s) 387, 2073
BspT104I TTCGAA 1 cut(s) 2506
BsrDI GCAATG 3 cut(s) 209, 1447, 2559
BsrGI TGTACA 1 cut(s) 2512
BssECI CCNNGG 4 cut(s) 1294, 1390, 2257, 2343
BssMI GATC 8 cut(s) 136, 1246, 1569, 2095, 2395, 2752, 2827, 2943
BssNAI GTATAC 2 cut(s) 1506, 1789
BssNI GRCGYC 1 cut(s) 869
BssT1I CCWWGG 2 cut(s) 1390, 2257
Bst1107I GTATAC 2 cut(s) 1506, 1789
Bst2UI CCWGG 2 cut(s) 956, 1712
Bst4CI ACNGT 8 cut(s) 314, 1127, 1295, 1366, 1461, 1627, 1930, 3077
Bst6I CTCTTC 7 cut(s) 387, 847, 1089, 1156, 2073, 2212, 3189
BstACI GRCGYC 1 cut(s) 869
BstAUI TGTACA 1 cut(s) 2512
BstBI TTCGAA 1 cut(s) 2506
BstC8I GCNNGC 5 cut(s) 88, 1020, 1773, 2804, 2955
BstDSI CCRYGG 1 cut(s) 1294
BstEII GGTNACC 1 cut(s) 218
BstENI CCTNNNNNAGG 1 cut(s) 612
BstF5I GGATG 2 cut(s) 166, 2249
BstFNI CGCG 1 cut(s) 2940
BstH2I RGCGCY 1 cut(s) 158
BstHHI GCGC 1 cut(s) 157
BstKTI GATC 8 cut(s) 139, 1249, 1572, 2098, 2398, 2755, 2830, 2946
BstMAI GTCTC 5 cut(s) 876, 1086, 1232, 1745, 2940
BstMBI GATC 8 cut(s) 136, 1246, 1569, 2095, 2395, 2752, 2827, 2943
BstMWI GCNNNNNNNGC 4 cut(s) 161, 1287, 1649, 1904
BstNI CCWGG 2 cut(s) 956, 1712
BstPAI GACNNNNGTC 1 cut(s) 2151
BstPI GGTNACC 1 cut(s) 218
BstSCI CCNGG 3 cut(s) 954, 1710, 2992
BstSFI CTRYAG 1 cut(s) 88
BstSLI GKGCMC 1 cut(s) 2903
BstUI CGCG 1 cut(s) 2940
BstV1I GCAGC 8 cut(s) 102, 792, 1409, 1456, 1844, 1929, 2007, 2147
BstV2I GAAGAC 3 cut(s) 1693, 2185, 2696
BstX2I RGATCY 3 cut(s) 136, 1569, 2095
BstYI RGATCY 3 cut(s) 136, 1569, 2095
BstZ17I GTATAC 2 cut(s) 1506, 1789
Bsu36I CCTNAGG 1 cut(s) 1341
BsuI GTATCC 2 cut(s) 738, 1146
BsuRI GGCC 4 cut(s) 86, 1106, 2188, 2743
BtgI CCRYGG 1 cut(s) 1294
BtrI CACGTC 1 cut(s) 1691
BtsCI GGATG 2 cut(s) 166, 2249
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 5 cut(s) 66, 235, 258, 735, 1909
Cac8I GCNNGC 5 cut(s) 88, 1020, 1773, 2804, 2955
CciI TCATGA 2 cut(s) 1320, 2488
CfoI GCGC 1 cut(s) 157
Cfr13I GGNCC 7 cut(s) 19, 452, 1337, 1488, 1883, 2102, 2186
Csp6I GTAC 6 cut(s) 1875, 2202, 2513, 2622, 3066, 3138
CviAII CATG 5 cut(s) 225, 1321, 2489, 2617, 2807
CviQI GTAC 6 cut(s) 1875, 2202, 2513, 2622, 3066, 3138
DpnI GATC 8 cut(s) 138, 1248, 1571, 2097, 2397, 2754, 2829, 2945
DpnII GATC 8 cut(s) 136, 1246, 1569, 2095, 2395, 2752, 2827, 2943
DraI TTTAAA 1 cut(s) 624
EaeI YGGCCR 1 cut(s) 1104
Eam1104I CTCTTC 7 cut(s) 387, 847, 1089, 1156, 2073, 2212, 3189
EarI CTCTTC 7 cut(s) 387, 847, 1089, 1156, 2073, 2212, 3189
Ecl136II GAGCTC 1 cut(s) 397
Eco130I CCWWGG 2 cut(s) 1390, 2257
Eco24I GRGCYC 2 cut(s) 399, 1389
Eco32I GATATC 1 cut(s) 1353
Eco47I GGWCC 6 cut(s) 19, 452, 1337, 1488, 1883, 2102
Eco47III AGCGCT 1 cut(s) 156
Eco53kI GAGCTC 1 cut(s) 397
Eco57I CTGAAG 6 cut(s) 165, 1099, 1239, 1524, 2150, 3097
Eco81I CCTNAGG 1 cut(s) 1341
Eco88I CYCGRG 1 cut(s) 2625
Eco91I GGTNACC 1 cut(s) 218
EcoICRI GAGCTC 1 cut(s) 397
EcoNI CCTNNNNNAGG 1 cut(s) 612
EcoO109I RGGNCCY 2 cut(s) 19, 452
EcoO65I GGTNACC 1 cut(s) 218
EcoRI GAATTC 3 cut(s) 71, 1916, 2852
EcoRII CCWGG 2 cut(s) 954, 1710
EcoRV GATATC 1 cut(s) 1353
EcoT14I CCWWGG 2 cut(s) 1390, 2257
EcoT38I GRGCYC 2 cut(s) 399, 1389
ErhI CCWWGG 2 cut(s) 1390, 2257
Esp3I CGTCTC 2 cut(s) 876, 1086
FaeI CATG 5 cut(s) 228, 1324, 2492, 2620, 2810
FaqI GGGAC 6 cut(s) 519, 592, 1214, 1375, 1501, 1864
FatI CATG 5 cut(s) 224, 1320, 2488, 2616, 2806
FauNDI CATATG 1 cut(s) 1879
FbaI TGATCA 1 cut(s) 2395
FblI GTMKAC 4 cut(s) 1300, 1505, 1788, 2835
Fnu4HI GCNGC 9 cut(s) 84, 91, 806, 1398, 1470, 1858, 1943, 2021, 2136
FokI GGATG 2 cut(s) 173, 2236
FriOI GRGCYC 2 cut(s) 399, 1389
Fsp4HI GCNGC 9 cut(s) 84, 91, 806, 1398, 1470, 1858, 1943, 2021, 2136
GlaI GCGC 1 cut(s) 156
GluI GCNGC 9 cut(s) 84, 91, 806, 1398, 1470, 1858, 1943, 2021, 2136
GsuI CTGGAG 2 cut(s) 2399, 3031
HaeII RGCGCY 1 cut(s) 158
HaeIII GGCC 4 cut(s) 86, 1106, 2188, 2743
HapII CCGG 3 cut(s) 749, 2657, 2994
HhaI GCGC 1 cut(s) 157
Hin1I GRCGYC 1 cut(s) 869
Hin1II CATG 5 cut(s) 228, 1324, 2492, 2620, 2810
Hin6I GCGC 1 cut(s) 155
HinP1I GCGC 1 cut(s) 155
HincII GTYRAC 3 cut(s) 789, 1096, 3096
HindII GTYRAC 3 cut(s) 789, 1096, 3096
HindIII AAGCTT 3 cut(s) 773, 1631, 2165
HpaI GTTAAC 1 cut(s) 1096
HpaII CCGG 3 cut(s) 749, 2657, 2994
HphI GGTGA 9 cut(s) 230, 536, 544, 680, 944, 2904, 3028, 3068, 3221
HpyCH4III ACNGT 8 cut(s) 314, 1127, 1295, 1366, 1461, 1627, 1930, 3077
HpyCH4IV ACGT 5 cut(s) 869, 1690, 1716, 2443, 2818
HpyF10VI GCNNNNNNNGC 4 cut(s) 161, 1287, 1649, 1904
HpySE526I ACGT 5 cut(s) 869, 1690, 1716, 2443, 2818
Hsp92I GRCGYC 1 cut(s) 869
Hsp92II CATG 5 cut(s) 228, 1324, 2492, 2620, 2810
HspAI GCGC 1 cut(s) 155
Ksp22I TGATCA 1 cut(s) 2395
KspAI GTTAAC 1 cut(s) 1096
Kzo9I GATC 8 cut(s) 136, 1246, 1569, 2095, 2395, 2752, 2827, 2943
LguI GCTCTTC 2 cut(s) 387, 2073
LmnI GCTCC 5 cut(s) 385, 2052, 2348, 2364, 2799
Lsp1109I GCAGC 8 cut(s) 102, 792, 1409, 1456, 1844, 1929, 2007, 2147
LweI GCATC 6 cut(s) 151, 473, 495, 1481, 2255, 2434
MaeII ACGT 5 cut(s) 869, 1690, 1716, 2443, 2818
MaeIII GTNAC 9 cut(s) 184, 218, 322, 1411, 2275, 2534, 2971, 2996, 3025
MalI GATC 8 cut(s) 138, 1248, 1571, 2097, 2397, 2754, 2829, 2945
MboI GATC 8 cut(s) 136, 1246, 1569, 2095, 2395, 2752, 2827, 2943
MfeI CAATTG 3 cut(s) 468, 2237, 2640
MflI RGATCY 3 cut(s) 136, 1569, 2095
MhlI GDGCHC 4 cut(s) 399, 1020, 1389, 2903
MlsI TGGCCA 1 cut(s) 1106
MluNI TGGCCA 1 cut(s) 1106
MlyI GAGTC 6 cut(s) 784, 1076, 1196, 2398, 2543, 2831
MmeI TCCRAC 3 cut(s) 948, 1125, 1215
Mox20I TGGCCA 1 cut(s) 1106
MroXI GAANNNNTTC 1 cut(s) 1537
MscI TGGCCA 1 cut(s) 1106
MslI CAYNNNNRTG 2 cut(s) 2520, 2598
Msp20I TGGCCA 1 cut(s) 1106
MspA1I CMGCKG 1 cut(s) 2736
MspI CCGG 3 cut(s) 749, 2657, 2994
MspR9I CCNGG 3 cut(s) 956, 1712, 2994
MunI CAATTG 3 cut(s) 468, 2237, 2640
Mva1269I GAATGC 2 cut(s) 2955, 3160
MvaI CCWGG 2 cut(s) 956, 1712
MvnI CGCG 1 cut(s) 2940
MwoI GCNNNNNNNGC 4 cut(s) 161, 1287, 1649, 1904
NciI CCSGG 1 cut(s) 2994
NdeI CATATG 1 cut(s) 1879
NdeII GATC 8 cut(s) 136, 1246, 1569, 2095, 2395, 2752, 2827, 2943
NheI GCTAGC 1 cut(s) 1771
NlaIII CATG 5 cut(s) 228, 1324, 2492, 2620, 2810
NlaIV GGNNCC 3 cut(s) 20, 1489, 2360
NmuCI GTSAC 4 cut(s) 218, 1411, 2275, 2971
NspV TTCGAA 1 cut(s) 2506
PagI TCATGA 2 cut(s) 1320, 2488
PciSI GCTCTTC 2 cut(s) 387, 2073
PctI GAATGC 2 cut(s) 2955, 3160
PdmI GAANNNNTTC 1 cut(s) 1537
PfeI GAWTC 4 cut(s) 673, 911, 2334, 2495
PflMI CCANNNNNTGG 1 cut(s) 230
PfoI TCCNGGA 1 cut(s) 1710
PkrI GCNGC 9 cut(s) 85, 92, 807, 1399, 1471, 1859, 1944, 2022, 2137
PleI GAGTC 6 cut(s) 784, 1075, 1196, 2397, 2543, 2831
PpsI GAGTC 6 cut(s) 784, 1075, 1196, 2397, 2543, 2831
PpuMI RGGWCCY 2 cut(s) 19, 452
PshAI GACNNNNGTC 1 cut(s) 2151
PsiI TTATAA 1 cut(s) 1314
Psp124BI GAGCTC 1 cut(s) 399
Psp5II RGGWCCY 2 cut(s) 19, 452
Psp6I CCWGG 2 cut(s) 954, 1710
PspEI GGTNACC 1 cut(s) 218
PspGI CCWGG 2 cut(s) 954, 1710
PspN4I GGNNCC 3 cut(s) 20, 1489, 2360
PspPI GGNCC 7 cut(s) 19, 452, 1337, 1488, 1883, 2102, 2186
PspPPI RGGWCCY 2 cut(s) 19, 452
PstI CTGCAG 1 cut(s) 92
PsuI RGATCY 3 cut(s) 136, 1569, 2095
RsaI GTAC 6 cut(s) 1876, 2203, 2514, 2623, 3067, 3139
RsaNI GTAC 6 cut(s) 1875, 2202, 2513, 2622, 3066, 3138
RseI CAYNNNNRTG 2 cut(s) 2520, 2598
SacI GAGCTC 1 cut(s) 399
SapI GCTCTTC 2 cut(s) 387, 2073
SatI GCNGC 9 cut(s) 84, 91, 806, 1398, 1470, 1858, 1943, 2021, 2136
Sau3AI GATC 8 cut(s) 136, 1246, 1569, 2095, 2395, 2752, 2827, 2943
Sau96I GGNCC 7 cut(s) 19, 452, 1337, 1488, 1883, 2102, 2186
ScaI AGTACT 2 cut(s) 2623, 3067
SchI GAGTC 6 cut(s) 784, 1076, 1196, 2398, 2543, 2831
ScrFI CCNGG 3 cut(s) 956, 1712, 2994
SduI GDGCHC 4 cut(s) 399, 1020, 1389, 2903
SfaNI GCATC 6 cut(s) 151, 473, 495, 1481, 2255, 2434
SfcI CTRYAG 1 cut(s) 88
SfuI TTCGAA 1 cut(s) 2506
SinI GGWCC 6 cut(s) 19, 452, 1337, 1488, 1883, 2102
SmiMI CAYNNNNRTG 2 cut(s) 2520, 2598
SmlI CTYRAG 2 cut(s) 1204, 1607
SmoI CTYRAG 2 cut(s) 1204, 1607
SsiI CCGC 5 cut(s) 83, 239, 666, 1332, 2736
SspI AATATT 1 cut(s) 904
SstI GAGCTC 1 cut(s) 399
StyD4I CCNGG 3 cut(s) 954, 1710, 2992
StyI CCWWGG 2 cut(s) 1390, 2257
TaaI ACNGT 8 cut(s) 314, 1127, 1295, 1366, 1461, 1627, 1930, 3077
TaiI ACGT 5 cut(s) 872, 1693, 1719, 2446, 2821
TaqI TCGA 2 cut(s) 14, 2506
TaqII GACCGA 2 cut(s) 1436, 2708
TatI WGTACW 4 cut(s) 2512, 2621, 3065, 3137
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 4 cut(s) 673, 911, 2334, 2495
TscAI CASTG 5 cut(s) 73, 235, 265, 742, 1909
TseFI GTSAC 4 cut(s) 218, 1411, 2275, 2971
TseI GCWGC 8 cut(s) 90, 805, 1397, 1469, 1857, 1942, 2020, 2135
Tsp45I GTSAC 4 cut(s) 218, 1411, 2275, 2971
TspGWI ACGGA 1 cut(s) 551
TspRI CASTG 5 cut(s) 73, 235, 265, 742, 1909
Van91I CCANNNNNTGG 1 cut(s) 230
VneI GTGCAC 1 cut(s) 2899
VpaK11BI GGWCC 6 cut(s) 19, 452, 1337, 1488, 1883, 2102
XagI CCTNNNNNAGG 1 cut(s) 612
XapI RAATTY 7 cut(s) 71, 1637, 1916, 2323, 2746, 2852, 3050
XbaI TCTAGA 3 cut(s) 874, 2722, 2840
XcmI CCANNNNNNNNNTGG 1 cut(s) 3050
XmiI GTMKAC 4 cut(s) 1300, 1505, 1788, 2835
XmnI GAANNNNTTC 1 cut(s) 1537
ZraI GACGTC 1 cut(s) 870
ZrmI AGTACT 2 cut(s) 2623, 3067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.