pycom05g24440

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
26015533 .. 26020811
5279 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g24440.8

Sequence Viewer

Length: 2499 bp
ATGTCTGCATTGATTATATTGTCAATTGGCCACAATTCATTCTCTGGGCCCATCCCCAAGGAGCTTGGAAATCTTACAGAGCTAAATATGCTGGCCATCGGATCAAATAATTTCTCCGGAACACTCCCTCCAGAACTTGGTAATTTAGTCAAGCTCCAGCAAATTTACATGGACAGCTGTGGACTCAGTGGTGAAATTCCTTCAACATTTGCCAAGCTCACCAGTACGCAAATCTTTTGGGCATCGGACAGTCTTTTCTCAGGAAAGATACCTGATTTCATAGGGAATTGGACACAACTCACTTCTTTGCGATTTCAAGGGAACTCTTTCGAAGGCCCAATACCAACCGGCTTTTCTCAATTAACCTCATTGAAGTCTCTGCAAATCAGTGATATATACGATGGGAGCTCCTCTCTTGATTTCATAAAAAATATGAAGAACTTGACTGAGTTAAAACTACGAAACGCATTAATCACTGGTACCATCCCATCTGATATTGGAGAATATCAAAGTCTACAGATACTGGATCTGAGTTTCAACAATTTGACAGGCCAACTCCCAAGTTCTTTGTTCACCATGAGTTCTATTACATCCTTGTTTGTTGGAAACAATAGTCTGGCTGATCGATCTCTTCCGAGCCAAAAGAGCAATCGACTTCAGACTATAGATTTGTCTTACAATTTTTTATCAGGAAGCTTTCCCCAGTGGGTGATAACAATATCGCAACTGAACTTAGTGGTCAACAACTTCACAATTGACAAAAAAAACATAACTCTTCCTGGATTGGATTGCCTCCAGAGAAATTTTCCATGCAATCGAAATACCCCACGATATGCAAACTTCTCAATCACCTGTGGTGGACCGCAAAGGAGGGGACGTGATGGCATATTGTATGAGGCTGAAGACTCAGATCTTGGTCCAGCAACATTCAATGTAACCAGTATAAAGCAATGGGCCGTCAGCAATGTTGGTATGTTTTATGACGGAGTGAACCGACCGTTTCTGGTAAATACCCTTGCACAAGTCACCGGAACAGATGTGACCCCGGAGCTTTTCCAGACTTCAAGATTGTCCCCAGGATCGATGAGATACTATGGCCTGGGTCTTGAGAATGGACCTTACACTGTAACATTGCACTTTGCAGAGACGGTTTTTGATAGGCGCATTCAGCAAACTTGGGAAAGTCTAGGACGGCGTGTATTTGATATCTATATTCAGGGTACCCGCAGGATAAAGGACTTTGACATATCCAAGGAGGCAGGTGGGGTTAACGTAGGAATTATGAAAAGATTCAATGTTAGCGTGTCAGAGAATTATCTTGAAATTCATCTGTTCTGGGCTGGTAAAGGGACTTGTTGCATACCCAATCAAGGTGATTACGGCTCACTAATAGCAGCCATCCATGCTGCTTCAGATTTTACACCAACAGTTTCAGGGCTTCCACCAACTACTTCAGGAAAGAAGAGCAGGACTGGGTTGATAGTTGGTATTGCAGTTCCTCTTGGAGTTGTGAGCTTGCTATTAATATTTGCGATTCTATATACGAGAAGGAAAAAATCAGAAAAAGAGGATGACGAAGATATTCTAGGATTAGGCCCTCGACCAAATACTTTCAGTTATTCTGAGTTGAGAGCTGCAACCGAAGATTTTAATCCTTCAAATAAGTTAGGAGAGGGAGGATATGGCCCTGTTTACAAGGGTACACTTTCTGATGGGAGGGTAGTGGCTGTGAAGCAACTTTCAGTAGCATCTCACCAAGGGAAGAGTCAATTTGTATCTGAAATTGCTACCATATCTGCTGTGCAACATCGAAATCTAGTGAAATTGTATGGATGCTGCATCGAAGGCAGCCAGCGCATTTTGGTTTATGAGTATCTTGAAAACAAGAGCCTTTGTTTGTTTGATCGATCAGTGGATGTGTTCACTCATATTTCAGGAACAAGTAACTTGCACCTTGACTGGCCTACTCGATTCAATATATTGTTGGGAATAGCAAGAGGACTTGCTTACCTTCATGAGGAGTCAAGGCCAAGGATTGTACATCGAGATGTCAAAGCGAGTAATATTTTGCTCAATGCAGAACTCTCCCCAAAAATATCAGATTTTGGACTGGCAAAGCTTTATGATGACAAGAAAACCCACATCAGCACCCGGGTTGCAGGGACAATAGGCTATTTGGCACCGGAGTATGCATTGTTTGGACATTTGACAGAGAAGGCCGATGTGTTTGGTTTTGGAGTCGTTGTTTTGGAGATCCTCAGCGGGAGACCAAACTCTTACAATAACTTGGATTCAGAAAAGATTTATCTTCTTGAATGGGTATGGACTCTACATGAAAACAACCAAACTCTAGGGCTGGTGGATCCGAGATTGACAGAGTTTGATGAAACTGAAGCAACTAGATTGATAAGAGCAGCTCTCCTGTGCACGCAGGGATCGATCACCGATGGCGAGGCCATCTATGTCACGCGTGGTTGCAATGCTCTCTGGAGACATTAA

Protein Analysis

833

Amino Acids

91.83

Weight (kDa)

6.43

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1250
Acc36I ACCTGC 1 cut(s) 1250
Acc65I GGTACC 2 cut(s) 479, 1220
AccB1I GGYRCC 3 cut(s) 479, 1220, 2179
AccB7I CCANNNNNTGG 1 cut(s) 137
AccI GTMKAC 1 cut(s) 514
AccII CGCG 1 cut(s) 2470
AccIII TCCGGA 1 cut(s) 116
AciI CCGC 3 cut(s) 863, 1225, 2262
AclWI GGATC 7 cut(s) 109, 534, 1087, 2248, 2357, 2370, 2443
AcoI YGGCCR 2 cut(s) 28, 93
AcsI RAATTY 4 cut(s) 162, 195, 802, 1323
AcuI CTGAAG 5 cut(s) 641, 921, 1395, 1437, 2412
AfaI GTAC 5 cut(s) 226, 481, 1222, 1702, 2040
AfiI CCNNNNNNNGG 3 cut(s) 137, 1370, 2017
AflIII ACRYGT 1 cut(s) 2468
AjiI CACGTC 1 cut(s) 878
AjnI CCWGG 3 cut(s) 778, 1075, 1098
AjuI GAANNNNNNNTTGG 2 cut(s) 337, 369
AloI GAACNNNNNNTCC 2 cut(s) 112, 144
Alw21I GWGCWC 2 cut(s) 410, 2429
Alw26I GTCTC 4 cut(s) 381, 1139, 2260, 2485
Alw44I GTGCAC 1 cut(s) 2425
AlwI GGATC 7 cut(s) 109, 534, 1087, 2248, 2357, 2370, 2443
AlwNI CAGNNNCTG 1 cut(s) 523
Ama87I CYCGRG 1 cut(s) 2151
Aor13HI TCCGGA 1 cut(s) 116
ApaI GGGCCC 1 cut(s) 51
ApaLI GTGCAC 1 cut(s) 2425
ApeKI GCWGC 6 cut(s) 1394, 1406, 1634, 1836, 1848, 2414
ApoI RAATTY 4 cut(s) 162, 195, 802, 1323
ArsI GACNNNNNNTTYG 2 cut(s) 652, 684
AseI ATTAAT 2 cut(s) 470, 1523
Asp700I GAANNNNTTC 3 cut(s) 326, 1289, 1581
Asp718I GGTACC 2 cut(s) 479, 1220
AspLEI GCGC 2 cut(s) 1164, 1857
AspS9I GGNCC 9 cut(s) 47, 48, 335, 860, 917, 954, 1115, 1595, 1685
AsuC2I CCSGG 3 cut(s) 1046, 2152, 2153
AsuHPI GGTGA 9 cut(s) 203, 211, 565, 721, 841, 1018, 1385, 1745, 2434
AsuII TTCGAA 1 cut(s) 330
AvaI CYCGRG 1 cut(s) 2151
AvaII GGWCC 3 cut(s) 860, 917, 1115
BaeGI GKGCMC 2 cut(s) 51, 2429
BalI TGGCCA 2 cut(s) 30, 95
BamHI GGATCC 1 cut(s) 2362
BanI GGYRCC 3 cut(s) 479, 1220, 2179
BanII GRGCYC 2 cut(s) 51, 410
BarI GAAGNNNNNNTAC 2 cut(s) 324, 356
BbsI GAAGAC 1 cut(s) 909
Bbv12I GWGCWC 2 cut(s) 410, 2429
BbvCI CCTCAGC 1 cut(s) 2258
BbvI GCAGC 6 cut(s) 1393, 1406, 1621, 1823, 1860, 2426
BceAI ACGGC 3 cut(s) 941, 1208, 1396
BciT130I CCWGG 3 cut(s) 780, 1077, 1100
BcnI CCSGG 3 cut(s) 1046, 2152, 2153
BcoDI GTCTC 4 cut(s) 381, 1139, 2260, 2485
BfaI CTAG 5 cut(s) 1187, 1586, 1817, 2351, 2400
BfmI CTRYAG 2 cut(s) 515, 663
BfuAI ACCTGC 1 cut(s) 1250
BglII AGATCT 1 cut(s) 910
BisI GCNGC 6 cut(s) 1395, 1407, 1635, 1837, 1849, 2415
BlsI GCNGC 6 cut(s) 1396, 1408, 1636, 1838, 1850, 2416
Bme1390I CCNGG 6 cut(s) 780, 1046, 1077, 1100, 2152, 2153
Bme18I GGWCC 3 cut(s) 860, 917, 1115
BmeT110I CYCGRG 1 cut(s) 2151
BmgBI CACGTC 1 cut(s) 878
BmgT120I GGNCC 9 cut(s) 47, 48, 335, 860, 917, 954, 1115, 1595, 1685
BmiI GGNNCC 5 cut(s) 49, 481, 1222, 2181, 2364
BmrFI CCNGG 6 cut(s) 780, 1046, 1077, 1100, 2152, 2153
BmrI ACTGGG 2 cut(s) 697, 1482
BmsI GCATC 4 cut(s) 251, 1757, 1823, 1848
BmuI ACTGGG 2 cut(s) 697, 1482
BpiI GAAGAC 1 cut(s) 909
BplI GAGNNNNNCTC 4 cut(s) 397, 429, 2403, 2435
BpmI CTGGAG 3 cut(s) 114, 140, 779
Bpu10I CCTNAGC 1 cut(s) 2258
Bpu14I TTCGAA 1 cut(s) 330
BpuEI CTTGAG 1 cut(s) 1127
BpuMI CCSGG 3 cut(s) 1046, 2152, 2153
Bsa29I ATCGAT 4 cut(s) 625, 1082, 1906, 2438
BsaBI GATNNNNATC 1 cut(s) 1650
BsaI GGTCTC 1 cut(s) 2260
BsaJI CCNNGG 8 cut(s) 57, 1044, 1075, 1099, 1251, 1756, 2030, 2151
BsaWI WCCGGW 3 cut(s) 116, 1028, 2182
BsaXI ACNNNNNCTCC 6 cut(s) 112, 142, 862, 892, 2229, 2259
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 1370, 2017
Bse118I RCCGGY 1 cut(s) 347
Bse1I ACTGG 8 cut(s) 222, 481, 528, 703, 939, 1477, 1964, 2115
Bse3DI GCAATG 4 cut(s) 956, 970, 1130, 2485
Bse8I GATNNNNATC 1 cut(s) 1650
BseAI TCCGGA 1 cut(s) 116
BseBI CCWGG 3 cut(s) 780, 1077, 1100
BseCI ATCGAT 4 cut(s) 625, 1082, 1906, 2438
BseDI CCNNGG 8 cut(s) 57, 1044, 1075, 1099, 1251, 1756, 2030, 2151
BseGI GGATG 7 cut(s) 51, 483, 590, 1398, 1576, 1838, 1921
BseJI GATNNNNATC 1 cut(s) 1650
BseLI CCNNNNNNNGG 3 cut(s) 137, 1370, 2017
BseMI GCAATG 4 cut(s) 956, 970, 1130, 2485
BseMII CTCAG 7 cut(s) 199, 273, 438, 521, 921, 1614, 2272
BseNI ACTGG 8 cut(s) 222, 481, 528, 703, 939, 1477, 1964, 2115
BseRI GAGGAG 2 cut(s) 400, 2033
BseSI GKGCMC 2 cut(s) 51, 2429
BseXI GCAGC 6 cut(s) 1393, 1406, 1621, 1823, 1860, 2426
Bsh1236I CGCG 1 cut(s) 2470
Bsh1285I CGRYCG 1 cut(s) 998
BshNI GGYRCC 3 cut(s) 479, 1220, 2179
BshVI ATCGAT 4 cut(s) 625, 1082, 1906, 2438
BsiEI CGRYCG 1 cut(s) 998
BsiHKAI GWGCWC 2 cut(s) 410, 2429
BsiHKCI CYCGRG 1 cut(s) 2151
BsiSI CCGG 6 cut(s) 117, 348, 1029, 1046, 2152, 2183
BslFI GGGAC 4 cut(s) 888, 1057, 1363, 2176
BslI CCNNNNNNNGG 3 cut(s) 137, 1370, 2017
BsmAI GTCTC 4 cut(s) 381, 1139, 2260, 2485
BsmBI CGTCTC 1 cut(s) 1139
BsmFI GGGAC 4 cut(s) 888, 1057, 1363, 2176
BsmI GAATGC 1 cut(s) 1164
Bso31I GGTCTC 1 cut(s) 2260
BsoBI CYCGRG 1 cut(s) 2151
Bsp119I TTCGAA 1 cut(s) 330
Bsp120I GGGCCC 1 cut(s) 47
Bsp1286I GDGCHC 3 cut(s) 51, 410, 2429
Bsp13I TCCGGA 1 cut(s) 116
Bsp1407I TGTACA 1 cut(s) 2038
BspACI CCGC 3 cut(s) 863, 1225, 2262
BspCNI CTCAG 7 cut(s) 198, 272, 439, 522, 920, 1615, 2271
BspDI ATCGAT 4 cut(s) 625, 1082, 1906, 2438
BspEI TCCGGA 1 cut(s) 116
BspFNI CGCG 1 cut(s) 2470
BspHI TCATGA 1 cut(s) 2014
BspLI GGNNCC 5 cut(s) 49, 481, 1222, 2181, 2364
BspMI ACCTGC 1 cut(s) 1250
BspPI GGATC 7 cut(s) 109, 534, 1087, 2248, 2357, 2370, 2443
BspQI GCTCTTC 1 cut(s) 1457
BspT104I TTCGAA 1 cut(s) 330
BspT107I GGYRCC 3 cut(s) 479, 1220, 2179
BspTNI GGTCTC 1 cut(s) 2260
BsrDI GCAATG 4 cut(s) 956, 970, 1130, 2485
BsrFI RCCGGY 1 cut(s) 347
BsrGI TGTACA 1 cut(s) 2038
BsrI ACTGG 8 cut(s) 222, 481, 528, 703, 939, 1477, 1964, 2115
BssAI RCCGGY 1 cut(s) 347
BssECI CCNNGG 8 cut(s) 57, 1044, 1075, 1099, 1251, 1756, 2030, 2151
BssT1I CCWWGG 4 cut(s) 57, 1251, 1756, 2030
Bst2UI CCWGG 3 cut(s) 780, 1077, 1100
Bst4CI ACNGT 5 cut(s) 251, 999, 1126, 1150, 1429
Bst6I CTCTTC 4 cut(s) 636, 780, 1457, 1757
BstAUI TGTACA 1 cut(s) 2038
BstBI TTCGAA 1 cut(s) 330
BstC8I GCNNGC 4 cut(s) 93, 1517, 1853, 2429
BstDEI CTNAG 8 cut(s) 185, 259, 447, 530, 733, 907, 1623, 2258
BstENI CCTNNNNNAGG 1 cut(s) 2015
BstF5I GGATG 7 cut(s) 51, 483, 590, 1398, 1576, 1838, 1921
BstFNI CGCG 1 cut(s) 2470
BstHHI GCGC 2 cut(s) 1164, 1857
BstMAI GTCTC 4 cut(s) 381, 1139, 2260, 2485
BstMCI CGRYCG 1 cut(s) 998
BstMWI GCNNNNNNNGC 6 cut(s) 88, 645, 1168, 1403, 1845, 1854
BstNI CCWGG 3 cut(s) 780, 1077, 1100
BstSCI CCNGG 6 cut(s) 778, 1044, 1075, 1098, 2150, 2151
BstSFI CTRYAG 2 cut(s) 515, 663
BstSLI GKGCMC 2 cut(s) 51, 2429
BstUI CGCG 1 cut(s) 2470
BstV1I GCAGC 6 cut(s) 1393, 1406, 1621, 1823, 1860, 2426
BstV2I GAAGAC 1 cut(s) 909
BstX2I RGATCY 4 cut(s) 526, 910, 2253, 2362
BstYI RGATCY 4 cut(s) 526, 910, 2253, 2362
Bsu15I ATCGAT 4 cut(s) 625, 1082, 1906, 2438
BsuTUI ATCGAT 4 cut(s) 625, 1082, 1906, 2438
BtrI CACGTC 1 cut(s) 878
BtsCI GGATG 7 cut(s) 51, 483, 590, 1398, 1576, 1838, 1921
BtsIMutI CAGTG 6 cut(s) 193, 394, 474, 710, 1122, 1917
BveI ACCTGC 1 cut(s) 1250
Cac8I GCNNGC 4 cut(s) 93, 1517, 1853, 2429
CaiI CAGNNNCTG 1 cut(s) 523
CciI TCATGA 1 cut(s) 2014
CfoI GCGC 2 cut(s) 1164, 1857
Cfr10I RCCGGY 1 cut(s) 347
Cfr13I GGNCC 9 cut(s) 47, 48, 335, 860, 917, 954, 1115, 1595, 1685
Cfr9I CCCGGG 1 cut(s) 2151
ClaI ATCGAT 4 cut(s) 625, 1082, 1906, 2438
Csp6I GTAC 5 cut(s) 225, 480, 1221, 1701, 2039
CviAII CATG 6 cut(s) 169, 577, 810, 1403, 2015, 2333
CviQI GTAC 5 cut(s) 225, 480, 1221, 1701, 2039
DdeI CTNAG 8 cut(s) 185, 259, 447, 530, 733, 907, 1623, 2258
EaeI YGGCCR 2 cut(s) 28, 93
Eam1104I CTCTTC 4 cut(s) 636, 780, 1457, 1757
EarI CTCTTC 4 cut(s) 636, 780, 1457, 1757
Ecl136II GAGCTC 1 cut(s) 408
Eco130I CCWWGG 4 cut(s) 57, 1251, 1756, 2030
Eco24I GRGCYC 2 cut(s) 51, 410
Eco31I GGTCTC 1 cut(s) 2260
Eco32I GATATC 1 cut(s) 1207
Eco47I GGWCC 3 cut(s) 860, 917, 1115
Eco53kI GAGCTC 1 cut(s) 408
Eco57I CTGAAG 5 cut(s) 641, 921, 1395, 1437, 2412
Eco88I CYCGRG 1 cut(s) 2151
EcoICRI GAGCTC 1 cut(s) 408
EcoNI CCTNNNNNAGG 1 cut(s) 2015
EcoO109I RGGNCCY 1 cut(s) 1595
EcoRII CCWGG 3 cut(s) 778, 1075, 1098
EcoRV GATATC 1 cut(s) 1207
EcoT14I CCWWGG 4 cut(s) 57, 1251, 1756, 2030
EcoT22I ATGCAT 1 cut(s) 2194
EcoT38I GRGCYC 2 cut(s) 51, 410
ErhI CCWWGG 4 cut(s) 57, 1251, 1756, 2030
Esp3I CGTCTC 1 cut(s) 1139
FaeI CATG 6 cut(s) 172, 580, 813, 1406, 2018, 2336
FaqI GGGAC 4 cut(s) 888, 1057, 1363, 2176
FatI CATG 6 cut(s) 168, 576, 809, 1402, 2014, 2332
FauI CCCGC 2 cut(s) 1232, 2255
FblI GTMKAC 1 cut(s) 514
Fnu4HI GCNGC 6 cut(s) 1395, 1407, 1635, 1837, 1849, 2415
FokI GGATG 7 cut(s) 38, 470, 577, 1385, 1583, 1845, 1928
FriOI GRGCYC 2 cut(s) 51, 410
Fsp4HI GCNGC 6 cut(s) 1395, 1407, 1635, 1837, 1849, 2415
FspBI CTAG 5 cut(s) 1187, 1586, 1817, 2351, 2400
GlaI GCGC 2 cut(s) 1163, 1856
GluI GCNGC 6 cut(s) 1395, 1407, 1635, 1837, 1849, 2415
GsuI CTGGAG 3 cut(s) 114, 140, 779
HapII CCGG 6 cut(s) 117, 348, 1029, 1046, 2152, 2183
HhaI GCGC 2 cut(s) 1164, 1857
Hin1II CATG 6 cut(s) 172, 580, 813, 1406, 2018, 2336
Hin6I GCGC 2 cut(s) 1162, 1855
HinP1I GCGC 2 cut(s) 1162, 1855
HincII GTYRAC 2 cut(s) 742, 1270
HindII GTYRAC 2 cut(s) 742, 1270
HindIII AAGCTT 2 cut(s) 694, 2117
HpaI GTTAAC 1 cut(s) 1270
HpaII CCGG 6 cut(s) 117, 348, 1029, 1046, 2152, 2183
HphI GGTGA 9 cut(s) 203, 211, 565, 721, 841, 1018, 1385, 1745, 2434
HpyAV CCTTC 7 cut(s) 210, 326, 1542, 1665, 1838, 2021, 2209
HpyCH4III ACNGT 5 cut(s) 251, 999, 1126, 1150, 1429
HpyCH4IV ACGT 2 cut(s) 877, 1272
HpyF10VI GCNNNNNNNGC 6 cut(s) 88, 645, 1168, 1403, 1845, 1854
HpyF3I CTNAG 8 cut(s) 185, 259, 447, 530, 733, 907, 1623, 2258
HpySE526I ACGT 2 cut(s) 877, 1272
Hsp92II CATG 6 cut(s) 172, 580, 813, 1406, 2018, 2336
HspAI GCGC 2 cut(s) 1162, 1855
Kpn2I TCCGGA 1 cut(s) 116
KpnI GGTACC 2 cut(s) 483, 1224
KspAI GTTAAC 1 cut(s) 1270
LguI GCTCTTC 1 cut(s) 1457
LmnI GCTCC 5 cut(s) 61, 159, 405, 413, 1048
Lsp1109I GCAGC 6 cut(s) 1393, 1406, 1621, 1823, 1860, 2426
LweI GCATC 4 cut(s) 251, 1757, 1823, 1848
MaeI CTAG 5 cut(s) 1187, 1586, 1817, 2351, 2400
MaeII ACGT 2 cut(s) 877, 1272
MaeIII GTNAC 6 cut(s) 934, 1024, 1039, 1126, 1943, 2464
MboII GAAGA 9 cut(s) 448, 623, 767, 914, 1474, 1589, 1655, 1774, 2300
MfeI CAATTG 2 cut(s) 24, 753
MflI RGATCY 4 cut(s) 526, 910, 2253, 2362
MhlI GDGCHC 3 cut(s) 51, 410, 2429
MlsI TGGCCA 2 cut(s) 30, 95
MluI ACGCGT 1 cut(s) 2468
MluNI TGGCCA 2 cut(s) 30, 95
MlyI GAGTC 6 cut(s) 177, 899, 1774, 2030, 2247, 2320
MmeI TCCRAC 1 cut(s) 583
Mox20I TGGCCA 2 cut(s) 30, 95
Mph1103I ATGCAT 1 cut(s) 2194
MroI TCCGGA 1 cut(s) 116
MroXI GAANNNNTTC 3 cut(s) 326, 1289, 1581
MscI TGGCCA 2 cut(s) 30, 95
MseI TTAA 7 cut(s) 362, 452, 470, 1269, 1523, 1650, 2497
MslI CAYNNNNRTG 1 cut(s) 2046
Msp20I TGGCCA 2 cut(s) 30, 95
MspA1I CMGCKG 2 cut(s) 177, 2262
MspI CCGG 6 cut(s) 117, 348, 1029, 1046, 2152, 2183
MspR9I CCNGG 6 cut(s) 780, 1046, 1077, 1100, 2152, 2153
MunI CAATTG 2 cut(s) 24, 753
Mva1269I GAATGC 1 cut(s) 1164
MvaI CCWGG 3 cut(s) 780, 1077, 1100
MvnI CGCG 1 cut(s) 2470
MwoI GCNNNNNNNGC 6 cut(s) 88, 645, 1168, 1403, 1845, 1854
NciI CCSGG 3 cut(s) 1046, 2152, 2153
NlaIII CATG 6 cut(s) 172, 580, 813, 1406, 2018, 2336
NlaIV GGNNCC 5 cut(s) 49, 481, 1222, 2181, 2364
NmuCI GTSAC 3 cut(s) 1024, 1039, 2464
NsiI ATGCAT 1 cut(s) 2194
NspV TTCGAA 1 cut(s) 330
PagI TCATGA 1 cut(s) 2014
PaqCI CACCTGC 1 cut(s) 1250
PciSI GCTCTTC 1 cut(s) 1457
PcsI WCGNNNNNNNCGW 1 cut(s) 2435
PctI GAATGC 1 cut(s) 1164
PdmI GAANNNNTTC 3 cut(s) 326, 1289, 1581
PfeI GAWTC 4 cut(s) 1290, 1534, 1971, 2291
PflMI CCANNNNNTGG 1 cut(s) 137
PfoI TCCNGGA 1 cut(s) 778
PkrI GCNGC 6 cut(s) 1396, 1408, 1636, 1838, 1850, 2416
PleI GAGTC 6 cut(s) 177, 899, 1773, 2029, 2246, 2320
PpsI GAGTC 6 cut(s) 177, 899, 1773, 2029, 2246, 2320
PshBI ATTAAT 2 cut(s) 470, 1523
Psp124BI GAGCTC 1 cut(s) 410
Psp6I CCWGG 3 cut(s) 778, 1075, 1098
PspGI CCWGG 3 cut(s) 778, 1075, 1098
PspN4I GGNNCC 5 cut(s) 49, 481, 1222, 2181, 2364
PspOMI GGGCCC 1 cut(s) 47
PspPI GGNCC 9 cut(s) 47, 48, 335, 860, 917, 954, 1115, 1595, 1685
PstNI CAGNNNCTG 1 cut(s) 523
PsuI RGATCY 4 cut(s) 526, 910, 2253, 2362
PvuII CAGCTG 1 cut(s) 177
RsaI GTAC 5 cut(s) 226, 481, 1222, 1702, 2040
RsaNI GTAC 5 cut(s) 225, 480, 1221, 1701, 2039
RseI CAYNNNNRTG 1 cut(s) 2046
SacI GAGCTC 1 cut(s) 410
SapI GCTCTTC 1 cut(s) 1457
SaqAI TTAA 7 cut(s) 362, 452, 470, 1269, 1523, 1650, 2497
SatI GCNGC 6 cut(s) 1395, 1407, 1635, 1837, 1849, 2415
Sau96I GGNCC 9 cut(s) 47, 48, 335, 860, 917, 954, 1115, 1595, 1685
SchI GAGTC 6 cut(s) 177, 899, 1774, 2030, 2247, 2320
ScrFI CCNGG 6 cut(s) 780, 1046, 1077, 1100, 2152, 2153
SduI GDGCHC 3 cut(s) 51, 410, 2429
SfaNI GCATC 4 cut(s) 251, 1757, 1823, 1848
SfcI CTRYAG 2 cut(s) 515, 663
SfuI TTCGAA 1 cut(s) 330
SinI GGWCC 3 cut(s) 860, 917, 1115
SmaI CCCGGG 1 cut(s) 2153
SmiMI CAYNNNNRTG 1 cut(s) 2046
SmlI CTYRAG 1 cut(s) 1106
SmoI CTYRAG 1 cut(s) 1106
SsiI CCGC 3 cut(s) 863, 1225, 2262
SspI AATATT 2 cut(s) 1527, 2065
SspMI CTAG 5 cut(s) 1187, 1586, 1817, 2351, 2400
SstI GAGCTC 1 cut(s) 410
StyD4I CCNGG 6 cut(s) 778, 1044, 1075, 1098, 2150, 2151
StyI CCWWGG 4 cut(s) 57, 1251, 1756, 2030
TaaI ACNGT 5 cut(s) 251, 999, 1126, 1150, 1429
TaiI ACGT 2 cut(s) 880, 1275
TatI WGTACW 1 cut(s) 2038
TfiI GAWTC 4 cut(s) 1290, 1534, 1971, 2291
Tru1I TTAA 7 cut(s) 362, 452, 470, 1269, 1523, 1650, 2497
Tru9I TTAA 7 cut(s) 362, 452, 470, 1269, 1523, 1650, 2497
TscAI CASTG 6 cut(s) 193, 394, 481, 710, 1129, 1917
TseFI GTSAC 3 cut(s) 1024, 1039, 2464
TseI GCWGC 6 cut(s) 1394, 1406, 1634, 1836, 1848, 2414
Tsp45I GTSAC 3 cut(s) 1024, 1039, 2464
TspDTI ATGAA 9 cut(s) 27, 268, 412, 449, 1298, 1316, 2003, 2349, 2400
TspGWI ACGGA 1 cut(s) 999
TspMI CCCGGG 1 cut(s) 2151
TspRI CASTG 6 cut(s) 193, 394, 481, 710, 1129, 1917
Van91I CCANNNNNTGG 1 cut(s) 137
VneI GTGCAC 1 cut(s) 2425
VpaK11BI GGWCC 3 cut(s) 860, 917, 1115
VspI ATTAAT 2 cut(s) 470, 1523
XagI CCTNNNNNAGG 1 cut(s) 2015
XapI RAATTY 4 cut(s) 162, 195, 802, 1323
XmaI CCCGGG 1 cut(s) 2151
XmiI GTMKAC 1 cut(s) 514
XmnI GAANNNNTTC 3 cut(s) 326, 1289, 1581
XspI CTAG 5 cut(s) 1187, 1586, 1817, 2351, 2400
Zsp2I ATGCAT 1 cut(s) 2194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.