Rw0G007630
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00273
Physical Location & Seq
Reverse (-)
12272 .. 18245
5974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G007630.1

Sequence Viewer

Length: 2028 bp
ATGTGTGCACTATGCAGAGATTTGTCGTACAATTATCTAGATGGGAGAATTCCTTCTTGGGTCAAAGAAGAAAAATTACAGCTTAATTTAGTTGCCAACAACTTCAGCATAGAAAGTTTACAGAGCAGTGGTCTTCCTTCAGGGTTGGCTTGCCTTCAAAGAAACTTTCCTTGCAATCGTGGCCCTGGAATCTATTATAATTTTGGGATTAATTGTGGAGGACCTGAGATTATGTCTTCCTCCAATGGGATTGTGTATGAGAGGGAAGATGAGCCCCTTGGACCAGCTTCATATTTTGTGACTGGCACAACCAGATGGGGAGTTAGCAATTATACAAGTTTCTCCTTATCTCAATTCACAAATACTTTTGATTCTGTGCTATTCCAGACTGCAAGGCTCTCTGCTTCATCAATTAGATACTTTGGCTTGGGGCTTGAGAATGGTAACTACACCGTGAACCTCAAGTTTGCAGAACATGTCATTCTGGCTGCTGCTACCGGGAAATTTCTTGGGAAACGTCTTTTTGATATTTATATCCAGGGCATTCTGGTATCAAAGAATTTTGATATACTAAAGGAGGCAGGTATGTCATCTTTCGGAGCTGTTCAGAAGCCATACACGGCTCATGTTTCGGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGGACTTGCTGTATACCTGAGCGGGGTACTTACGGACCTGCTATTGCAGCCATCAGTGCTACACCGGATTTCATACCTACTGTCAGTAACAGCCTTCCAACTAGTAAGAAGAATAGAACTGGGCTGATTGTTGGGATTGTTGTGGGTGGTGGAGTAATTTTGGTTCTGTTGTTTGTGGCTTTTTATCTTATTCAAAGAAGAAAAAGGTCTGACCCTGATGATGACGAAGAGCTGTATGGGATAGATGTTGGGCCACTTACTTTCAGTTATCCTGAACTAAAGACAGCTACAAACGACTTTGATGAAGCTCATAAGCTTGGAGAGGGAGGATTTGGACCTGTCTATAGAGGAACACTTAGTGATGGAAGAGTAATTGCTGTGAAGCAATTGTCTGCTGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCTGTGCAACACAATAACCTCGTAAAGTTGTACGGATTCTGCACTGAGGGAGTTAAACGGCTCCTTGTCTATGAGTATCTGGAGAACAACAGTCTTGATCAAGCATTATTTGGAGAGAGACGTTTAAATCTTGATTGGTCAACACGTTTTAATATATGCTTGGGCATAGCTAGAGGTTTAACTTATCTTCATGAAGAATCAAGGGTTCGAATTGTACACAGAGATGTGAAGGCCAGTAATATTCTGCTTGACACTAATCTCACCCCCAAGATATCGGATTTTGGTTTGGCTAAGCTTTTTGATGAGAAAAAGACCCACATAAGTACCCGTGTTGCGGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTGTAGCTCTTGAAATTGTCAGTGGTAGGCCAAATTCTGATCCGAGTTTGGGTGAAGAAATGACTTATCTTCTCGAATGGGCTTGGCAATTGCATGAAAACAGACGGGCAGTTGAACTAGTGGACTCTAGATTATCTGAATTCAATGAGGAAGAAGCACAACGAATAATCAAAATAGGACTTTTGTGCACTCAAACATCGCCAATGCTACGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACAGACTGGAAATTTGATGATTTAACTACAGTCACCAGCCTAACAAAACTGGACGGCGTAAGTATTGTCACCAACGTGACTGATATGACGACTAGAGGAACGAATTTTAGCTTCAACAACTCATTAGCAAGTACAAGCATAATGGGGCAATCACCTCCTAATGCCATTCATTCTATGTCTAAAAATAATGTTGATGGCCGGTGA

Protein Analysis

675

Amino Acids

74.5

Weight (kDa)

6.12

Isoelectric Point (pI)

32.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 68 - 242 2.6e-39 Malectin domain
Pkinase PF00069 325 - 588 1.5e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 328 - 590 8.8e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 198
Acc36I ACCTGC 2 cut(s) 572, 718
AccBSI CCGCTC 1 cut(s) 694
AccI GTMKAC 1 cut(s) 685
AciI CCGC 2 cut(s) 694, 1454
AclWI GGATC 1 cut(s) 1568
AcoI YGGCCR 1 cut(s) 2020
AcsI RAATTY 7 cut(s) 48, 503, 559, 1567, 1673, 1835, 1927
AcuI CTGAAG 2 cut(s) 88, 123
AdeI CACNNNGTG 1 cut(s) 1031
AfaI GTAC 6 cut(s) 29, 700, 1151, 1335, 1444, 1957
AfiI CCNNNNNNNGG 5 cut(s) 246, 695, 1453, 1583, 1765
AflIII ACRYGT 2 cut(s) 475, 1262
AgsI TTSAA 8 cut(s) 158, 647, 866, 1547, 1649, 1678, 1809, 1939
AhlI ACTAGT 2 cut(s) 773, 1651
AjnI CCWGG 2 cut(s) 184, 537
AjuI GAANNNNNNNTTGG 2 cut(s) 40, 72
AleI CACNNNNGTG 1 cut(s) 1898
Alw21I GWGCWC 2 cut(s) 10, 1724
Alw26I GTCTC 1 cut(s) 1231
Alw44I GTGCAC 2 cut(s) 6, 1720
AlwI GGATC 1 cut(s) 1568
AoxI GGCC 5 cut(s) 181, 923, 1350, 1562, 2020
ApaLI GTGCAC 2 cut(s) 6, 1720
ApeKI GCWGC 4 cut(s) 488, 491, 719, 1067
ApoI RAATTY 7 cut(s) 48, 503, 559, 1567, 1673, 1835, 1927
ArsI GACNNNNNNTTYG 2 cut(s) 1820, 1852
AseI ATTAAT 1 cut(s) 210
Asp700I GAANNNNTTC 2 cut(s) 52, 1774
AspS9I GGNCC 6 cut(s) 182, 221, 281, 707, 923, 1007
AsuC2I CCSGG 2 cut(s) 499, 1815
AsuHPI GGTGA 5 cut(s) 1372, 1598, 1849, 1885, 1968
AsuII TTCGAA 1 cut(s) 1327
AvaII GGWCC 4 cut(s) 221, 281, 707, 1007
BaeGI GKGCMC 2 cut(s) 10, 1724
BaeI ACNNNNGTAYC 2 cut(s) 1426, 1459
BanII GRGCYC 1 cut(s) 276
BarI GAAGNNNNNNTAC 2 cut(s) 60, 92
BbsI GAAGAC 3 cut(s) 125, 228, 1517
Bbv12I GWGCWC 2 cut(s) 10, 1724
BbvI GCAGC 4 cut(s) 475, 478, 731, 1054
BccI CCATC 7 cut(s) 35, 309, 660, 731, 1028, 1756, 2012
BceAI ACGGC 3 cut(s) 636, 1193, 1894
BciT130I CCWGG 2 cut(s) 186, 539
BclI TGATCA 1 cut(s) 1216
BcnI CCSGG 2 cut(s) 499, 1815
BcoDI GTCTC 1 cut(s) 1231
BcuI ACTAGT 2 cut(s) 773, 1651
BfaI CTAG 6 cut(s) 38, 774, 1290, 1652, 1662, 1917
BfmI CTRYAG 2 cut(s) 1015, 1851
BfuAI ACCTGC 2 cut(s) 572, 718
BisI GCNGC 4 cut(s) 489, 492, 720, 1068
BlpI GCTNAGC 1 cut(s) 1410
BlsI GCNGC 4 cut(s) 490, 493, 721, 1069
Bme1390I CCNGG 4 cut(s) 186, 499, 539, 1815
Bme18I GGWCC 4 cut(s) 221, 281, 707, 1007
BmgT120I GGNCC 6 cut(s) 182, 221, 281, 707, 923, 1007
BmiI GGNNCC 1 cut(s) 1181
BmrFI CCNGG 4 cut(s) 186, 499, 539, 1815
BmrI ACTGGG 1 cut(s) 801
BmsI GCATC 1 cut(s) 1079
BmuI ACTGGG 1 cut(s) 801
BoxI GACNNNNGTC 1 cut(s) 1517
BpiI GAAGAC 3 cut(s) 125, 228, 1517
BpmI CTGGAG 1 cut(s) 1220
Bpu10I CCTNAGC 1 cut(s) 690
Bpu1102I GCTNAGC 1 cut(s) 1410
Bpu14I TTCGAA 1 cut(s) 1327
BpuEI CTTGAG 2 cut(s) 446, 455
BpuMI CCSGG 2 cut(s) 499, 1815
BsaJI CCNNGG 4 cut(s) 184, 277, 538, 1078
BsaWI WCCGGW 2 cut(s) 736, 1477
Bsc4I CCNNNNNNNGG 5 cut(s) 246, 695, 1453, 1583, 1765
Bse118I RCCGGY 1 cut(s) 2022
Bse1I ACTGG 6 cut(s) 307, 796, 1090, 1353, 1835, 1878
BseBI CCWGG 2 cut(s) 186, 539
BseDI CCNNGG 4 cut(s) 184, 277, 538, 1078
BseGI GGATG 2 cut(s) 1070, 1748
BseLI CCNNNNNNNGG 5 cut(s) 246, 695, 1453, 1583, 1765
BseMII CTCAG 4 cut(s) 216, 681, 1092, 1155
BseNI ACTGG 6 cut(s) 307, 796, 1090, 1353, 1835, 1878
BseSI GKGCMC 2 cut(s) 10, 1724
BseXI GCAGC 4 cut(s) 475, 478, 731, 1054
BsgI GTGCAG 1 cut(s) 1144
BshFI GGCC 5 cut(s) 183, 925, 1352, 1564, 2022
BsiHKAI GWGCWC 2 cut(s) 10, 1724
BsiSI CCGG 5 cut(s) 498, 737, 1478, 1815, 2023
BslFI GGGAC 2 cut(s) 688, 1741
BslI CCNNNNNNNGG 5 cut(s) 246, 695, 1453, 1583, 1765
BsmAI GTCTC 1 cut(s) 1231
BsmBI CGTCTC 1 cut(s) 1231
BsmFI GGGAC 2 cut(s) 688, 1741
BsmI GAATGC 2 cut(s) 543, 1776
BsnI GGCC 5 cut(s) 183, 925, 1352, 1564, 2022
Bsp119I TTCGAA 1 cut(s) 1327
Bsp1286I GDGCHC 3 cut(s) 10, 276, 1724
Bsp1407I TGTACA 1 cut(s) 1333
Bsp143I GATC 2 cut(s) 1216, 1573
Bsp1720I GCTNAGC 1 cut(s) 1410
BspACI CCGC 2 cut(s) 694, 1454
BspANI GGCC 5 cut(s) 183, 925, 1352, 1564, 2022
BspCNI CTCAG 4 cut(s) 217, 682, 1093, 1156
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 1 cut(s) 1181
BspMI ACCTGC 2 cut(s) 572, 718
BspPI GGATC 1 cut(s) 1568
BspQI GCTCTTC 1 cut(s) 894
BspT104I TTCGAA 1 cut(s) 1327
BsrBI CCGCTC 1 cut(s) 694
BsrFI RCCGGY 1 cut(s) 2022
BsrGI TGTACA 1 cut(s) 1333
BsrI ACTGG 6 cut(s) 307, 796, 1090, 1353, 1835, 1878
BssAI RCCGGY 1 cut(s) 2022
BssECI CCNNGG 4 cut(s) 184, 277, 538, 1078
BssMI GATC 2 cut(s) 1216, 1573
BssNAI GTATAC 1 cut(s) 686
BssT1I CCWWGG 2 cut(s) 277, 1078
Bst1107I GTATAC 1 cut(s) 686
Bst2UI CCWGG 2 cut(s) 186, 539
Bst4CI ACNGT 5 cut(s) 454, 754, 1211, 1801, 1855
Bst6I CTCTTC 2 cut(s) 894, 1033
BstAUI TGTACA 1 cut(s) 1333
BstBI TTCGAA 1 cut(s) 1327
BstC8I GCNNGC 1 cut(s) 151
BstDEI CTNAG 6 cut(s) 225, 690, 1028, 1101, 1164, 1410
BstF5I GGATG 2 cut(s) 1070, 1748
BstKTI GATC 2 cut(s) 1219, 1576
BstMAI GTCTC 1 cut(s) 1231
BstMBI GATC 2 cut(s) 1216, 1573
BstMWI GCNNNNNNNGC 3 cut(s) 180, 719, 728
BstNI CCWGG 2 cut(s) 186, 539
BstNSI RCATGY 1 cut(s) 479
BstPAI GACNNNNGTC 1 cut(s) 1517
BstSCI CCNGG 4 cut(s) 184, 497, 537, 1813
BstSFI CTRYAG 2 cut(s) 1015, 1851
BstSLI GKGCMC 2 cut(s) 10, 1724
BstV1I GCAGC 4 cut(s) 475, 478, 731, 1054
BstV2I GAAGAC 3 cut(s) 125, 228, 1517
BstZ17I GTATAC 1 cut(s) 686
BsuRI GGCC 5 cut(s) 183, 925, 1352, 1564, 2022
BtgZI GCGATG 1 cut(s) 1716
BtsCI GGATG 2 cut(s) 1070, 1748
BtsI GCAGTG 1 cut(s) 133
BtsIMutI CAGTG 4 cut(s) 133, 733, 1161, 1561
BveI ACCTGC 2 cut(s) 572, 718
Cac8I GCNNGC 1 cut(s) 151
CciI TCATGA 1 cut(s) 1309
Cfr10I RCCGGY 1 cut(s) 2022
Cfr13I GGNCC 6 cut(s) 182, 221, 281, 707, 923, 1007
Csp6I GTAC 6 cut(s) 28, 699, 1150, 1334, 1443, 1956
CviAII CATG 6 cut(s) 476, 626, 1310, 1489, 1628, 1753
CviQI GTAC 6 cut(s) 28, 699, 1150, 1334, 1443, 1956
DdeI CTNAG 6 cut(s) 225, 690, 1028, 1101, 1164, 1410
DpnI GATC 2 cut(s) 1218, 1575
DpnII GATC 2 cut(s) 1216, 1573
DraI TTTAAA 1 cut(s) 1245
DraIII CACNNNGTG 1 cut(s) 1031
EaeI YGGCCR 1 cut(s) 2020
Eam1104I CTCTTC 2 cut(s) 894, 1033
EarI CTCTTC 2 cut(s) 894, 1033
Eco130I CCWWGG 2 cut(s) 277, 1078
Eco24I GRGCYC 1 cut(s) 276
Eco32I GATATC 1 cut(s) 1392
Eco47I GGWCC 4 cut(s) 221, 281, 707, 1007
Eco57I CTGAAG 2 cut(s) 88, 123
EcoO109I RGGNCCY 1 cut(s) 221
EcoRI GAATTC 2 cut(s) 48, 1673
EcoRII CCWGG 2 cut(s) 184, 537
EcoRV GATATC 1 cut(s) 1392
EcoT14I CCWWGG 2 cut(s) 277, 1078
EcoT38I GRGCYC 1 cut(s) 276
ErhI CCWWGG 2 cut(s) 277, 1078
Esp3I CGTCTC 1 cut(s) 1231
FaeI CATG 6 cut(s) 479, 629, 1313, 1492, 1631, 1756
FaqI GGGAC 2 cut(s) 688, 1741
FatI CATG 6 cut(s) 475, 625, 1309, 1488, 1627, 1752
FauI CCCGC 2 cut(s) 687, 1447
FbaI TGATCA 1 cut(s) 1216
FblI GTMKAC 1 cut(s) 685
Fnu4HI GCNGC 4 cut(s) 489, 492, 720, 1068
FokI GGATG 2 cut(s) 1057, 1735
FriOI GRGCYC 1 cut(s) 276
Fsp4HI GCNGC 4 cut(s) 489, 492, 720, 1068
FspBI CTAG 6 cut(s) 38, 774, 1290, 1652, 1662, 1917
GluI GCNGC 4 cut(s) 489, 492, 720, 1068
GsuI CTGGAG 1 cut(s) 1220
HaeIII GGCC 5 cut(s) 183, 925, 1352, 1564, 2022
HapII CCGG 5 cut(s) 498, 737, 1478, 1815, 2023
Hin1II CATG 6 cut(s) 479, 629, 1313, 1492, 1631, 1756
HincII GTYRAC 1 cut(s) 1260
HindII GTYRAC 1 cut(s) 1260
HindIII AAGCTT 2 cut(s) 986, 1412
HinfI GANTC 5 cut(s) 189, 371, 1155, 1316, 1658
HpaII CCGG 5 cut(s) 498, 737, 1478, 1815, 2023
HphI GGTGA 5 cut(s) 1372, 1598, 1849, 1885, 1968
Hpy166II GTNNAC 9 cut(s) 8, 119, 457, 686, 1260, 1336, 1496, 1657, 1722
Hpy188I TCNGA 8 cut(s) 599, 609, 634, 883, 1396, 1573, 1578, 1672
Hpy8I GTNNAC 9 cut(s) 8, 119, 457, 686, 1260, 1336, 1496, 1657, 1722
HpyAV CCTTC 5 cut(s) 63, 147, 164, 776, 1342
HpyCH4III ACNGT 5 cut(s) 454, 754, 1211, 1801, 1855
HpyCH4IV ACGT 4 cut(s) 517, 1240, 1264, 1899
HpyF10VI GCNNNNNNNGC 3 cut(s) 180, 719, 728
HpyF3I CTNAG 6 cut(s) 225, 690, 1028, 1101, 1164, 1410
HpySE526I ACGT 4 cut(s) 517, 1240, 1264, 1899
Hsp92II CATG 6 cut(s) 479, 629, 1313, 1492, 1631, 1756
Ksp22I TGATCA 1 cut(s) 1216
Kzo9I GATC 2 cut(s) 1216, 1573
LguI GCTCTTC 1 cut(s) 894
LmnI GCTCC 2 cut(s) 599, 1185
Lsp1109I GCAGC 4 cut(s) 475, 478, 731, 1054
LweI GCATC 1 cut(s) 1079
MaeI CTAG 6 cut(s) 38, 774, 1290, 1652, 1662, 1917
MaeII ACGT 4 cut(s) 517, 1240, 1264, 1899
MalI GATC 2 cut(s) 1218, 1575
MbiI CCGCTC 1 cut(s) 694
MboI GATC 2 cut(s) 1216, 1573
MfeI CAATTG 3 cut(s) 1058, 1461, 1622
MhlI GDGCHC 3 cut(s) 10, 276, 1724
MlyI GAGTC 1 cut(s) 1652
MmeI TCCRAC 1 cut(s) 794
MroXI GAANNNNTTC 2 cut(s) 52, 1774
MseI TTAA 7 cut(s) 84, 210, 1173, 1244, 1269, 1298, 1847
MslI CAYNNNNRTG 2 cut(s) 1341, 1898
MspI CCGG 5 cut(s) 498, 737, 1478, 1815, 2023
MspR9I CCNGG 4 cut(s) 186, 499, 539, 1815
MunI CAATTG 3 cut(s) 1058, 1461, 1622
Mva1269I GAATGC 2 cut(s) 543, 1776
MvaI CCWGG 2 cut(s) 186, 539
MwoI GCNNNNNNNGC 3 cut(s) 180, 719, 728
NciI CCSGG 2 cut(s) 499, 1815
NdeII GATC 2 cut(s) 1216, 1573
NlaIII CATG 6 cut(s) 479, 629, 1313, 1492, 1631, 1756
NlaIV GGNNCC 1 cut(s) 1181
NmuCI GTSAC 5 cut(s) 298, 1792, 1855, 1891, 1900
NspI RCATGY 1 cut(s) 479
NspV TTCGAA 1 cut(s) 1327
OliI CACNNNNGTG 1 cut(s) 1898
PagI TCATGA 1 cut(s) 1309
PciI ACATGT 1 cut(s) 475
PciSI GCTCTTC 1 cut(s) 894
PctI GAATGC 2 cut(s) 543, 1776
PdmI GAANNNNTTC 2 cut(s) 52, 1774
PfeI GAWTC 4 cut(s) 189, 371, 1155, 1316
PkrI GCNGC 4 cut(s) 490, 493, 721, 1069
PleI GAGTC 1 cut(s) 1652
PpsI GAGTC 1 cut(s) 1652
PpuMI RGGWCCY 1 cut(s) 221
PscI ACATGT 1 cut(s) 475
PshAI GACNNNNGTC 1 cut(s) 1517
PshBI ATTAAT 1 cut(s) 210
PsiI TTATAA 1 cut(s) 198
Psp5II RGGWCCY 1 cut(s) 221
Psp6I CCWGG 2 cut(s) 184, 537
PspGI CCWGG 2 cut(s) 184, 537
PspN4I GGNNCC 1 cut(s) 1181
PspPI GGNCC 6 cut(s) 182, 221, 281, 707, 923, 1007
PspPPI RGGWCCY 1 cut(s) 221
PsrI GAACNNNNNNTAC 2 cut(s) 819, 851
RsaI GTAC 6 cut(s) 29, 700, 1151, 1335, 1444, 1957
RsaNI GTAC 6 cut(s) 28, 699, 1150, 1334, 1443, 1956
RseI CAYNNNNRTG 2 cut(s) 1341, 1898
SapI GCTCTTC 1 cut(s) 894
SaqAI TTAA 7 cut(s) 84, 210, 1173, 1244, 1269, 1298, 1847
SatI GCNGC 4 cut(s) 489, 492, 720, 1068
Sau3AI GATC 2 cut(s) 1216, 1573
Sau96I GGNCC 6 cut(s) 182, 221, 281, 707, 923, 1007
SchI GAGTC 1 cut(s) 1652
ScrFI CCNGG 4 cut(s) 186, 499, 539, 1815
SduI GDGCHC 3 cut(s) 10, 276, 1724
SfaNI GCATC 1 cut(s) 1079
SfcI CTRYAG 2 cut(s) 1015, 1851
SfuI TTCGAA 1 cut(s) 1327
SinI GGWCC 4 cut(s) 221, 281, 707, 1007
SmiMI CAYNNNNRTG 2 cut(s) 1341, 1898
SmlI CTYRAG 2 cut(s) 434, 461
SmoI CTYRAG 2 cut(s) 434, 461
SpeI ACTAGT 2 cut(s) 773, 1651
SsiI CCGC 2 cut(s) 694, 1454
SspI AATATT 1 cut(s) 1360
SspMI CTAG 6 cut(s) 38, 774, 1290, 1652, 1662, 1917
StyD4I CCNGG 4 cut(s) 184, 497, 537, 1813
StyI CCWWGG 2 cut(s) 277, 1078
TaaI ACNGT 5 cut(s) 454, 754, 1211, 1801, 1855
TaiI ACGT 4 cut(s) 520, 1243, 1267, 1902
TaqI TCGA 2 cut(s) 1327, 1608
TatI WGTACW 2 cut(s) 1333, 1955
TfiI GAWTC 4 cut(s) 189, 371, 1155, 1316
Tru1I TTAA 7 cut(s) 84, 210, 1173, 1244, 1269, 1298, 1847
Tru9I TTAA 7 cut(s) 84, 210, 1173, 1244, 1269, 1298, 1847
TscAI CASTG 4 cut(s) 133, 733, 1168, 1561
TseFI GTSAC 5 cut(s) 298, 1792, 1855, 1891, 1900
TseI GCWGC 4 cut(s) 488, 491, 719, 1067
Tsp45I GTSAC 5 cut(s) 298, 1792, 1855, 1891, 1900
TspDTI ATGAA 8 cut(s) 279, 396, 733, 990, 1298, 1326, 1644, 1982
TspGWI ACGGA 2 cut(s) 720, 1167
TspRI CASTG 4 cut(s) 133, 733, 1168, 1561
VneI GTGCAC 2 cut(s) 6, 1720
VpaK11BI GGWCC 4 cut(s) 221, 281, 707, 1007
VspI ATTAAT 1 cut(s) 210
XapI RAATTY 7 cut(s) 48, 503, 559, 1567, 1673, 1835, 1927
XbaI TCTAGA 2 cut(s) 37, 1661
XceI RCATGY 1 cut(s) 479
XmiI GTMKAC 1 cut(s) 685
XmnI GAANNNNTTC 2 cut(s) 52, 1774
XspI CTAG 6 cut(s) 38, 774, 1290, 1652, 1662, 1917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.