Rw2G019400
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
25526554 .. 25538989
12436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G019400.1

Sequence Viewer

Length: 1827 bp
ATGACTTCTTACTGGTTATCATCCACTAAAGTTTCAGAACCGAAAAGTTATGCAGGTAGCCAGGAAAGTTCAGGACTTGGAAGTTGTTGGTGTAATTCCAGACGAGTTATGGAGTTTGACTTCCCTCACCAATCTGGCATTCTGGTATCAAAGAATTTTGATATACTAAAGGAGGCAGGTATGTCATCTTTCGGAGCTGTTCAGAAGCCATACACGGCTCATGTTTCGGAGAACTACCTTGAAATCCATCTGTTTTGGGCTGGAAAGGGGACTTGCTGTATACCTGAGCGGGGTACTTATGGACCTGCTATTGCAGCCATCAGTGCTACACCGGATTTCATACCTACTGTCAGTAACAGCCTTCCAACTAGTAAGAAGAATAGAACTGGGCTGATTGTTGGGATTGTTGTGGGTGGTGGAGTAGTTTTGGTTCTGTTGTTTGTGGCTTTTTATCTTATTCAAAGAAGAAAAAGGTCTGACCCTGATGATGACGAAGAGCTGTATGGGATAGATGTTGGACCACTTACTTTCGGTTATCCTGAACTAAAGACAGCTACAAACGACTTTGATGAAGCTCATAAGCTTGGAGAGGGAGGATTTGGACCTGTCTATAGAGGAACACTTAGTGATGGAAGAGTAATTGCTGTGAAGCAATTGTCTGCAGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCTGTGCAACACAATAACCTGGTAAAGTTGTACGGATTCTGCACTGAGGGTGTTAAAAGGCTCCTTGTCTATGAGTATCTGGAGAACAACAGTCTTGATCAAGCATTATTTGGAGAGAGATGTTTAAATCTTGATTGGTCAACACGTTTTAATATATGCTTGGGCATAGCTAGAGGTTTAACTTATCTTCATGAAGAATCAAGGGTTCGAATTGTACACAGAGATGTGAAGGCCAGTAATATTCTGCTTGACACTAATGTCATCCCCAAGATATCGGATTTTGGTTTGGCTAAGCTTTTTGATGAGAAAAAGACCCACATAAGTACCCATGTTGCGGGAACAATTGGGTATCTTGCACCTGAATATGCCATGCGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTCTGGCTCTTGAAATTGTTAGTGGTAGGCCAAATTCTGATCCGAGTTTGGGTGAAGAAATGACTTATCTTCTCGAATGGGCTTGGCAATTGCATGAAAACAGACGGGAGGTTGAACTAGTGGACTCTAGATTATCTGAATTCAATGAGGAAGAAGCACAACGAATAATCAAAATAGGACTTTTGTGCACTCAAACATCACCAATGCTACGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACTGACTGGAAATTTGATGATTTAACTACAGTCACCAGCCTAACAAAACTGGACGGTGTAAGTATTGTCACCAACGTGACTGATATGACGACTAGAGGAACTGATTTTAGCTTCAACAACTCATTAGCAAGTACAAGCATAATGGGGCAATCACCTCCTAATGCCATTCATTCTATGTCCAAAAATAATGTTGATGGTCGGTCCAGGCGAACTGGAGGCGATGTCAAAAATGGAACAAGGCCGCTTCTGGAAGTGAGATCACACTTGGCCTTTGATTTGGATGAGCATAAACTTCTCAAAGCAATTAGGAGATTTCATTGCCTGGCGCCTCAACTTGGAAATAGGAAGAACTTAATTCTGAAACTTTACTTTTGGTTTTCTTCTCCTTATCAGTCACTCTGCTTCTGA

Protein Analysis

608

Amino Acids

67.52

Weight (kDa)

6.61

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 47 - 107 8.9e-11 Malectin domain
Pkinase PF00069 190 - 453 2.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 193 - 455 9.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 971
Acc36I ACCTGC 3 cut(s) 44, 167, 313
AccB1I GGYRCC 1 cut(s) 1744
AccBSI CCGCTC 1 cut(s) 289
AccI GTMKAC 1 cut(s) 280
AciI CCGC 3 cut(s) 289, 1049, 1661
AclWI GGATC 1 cut(s) 1163
AcsI RAATTY 4 cut(s) 154, 1162, 1268, 1430
AcyI GRCGYC 1 cut(s) 1745
AdeI CACNNNGTG 1 cut(s) 626
AfaI GTAC 5 cut(s) 295, 746, 930, 1039, 1552
AfiI CCNNNNNNNGG 5 cut(s) 290, 1048, 1178, 1360, 1754
AflIII ACRYGT 1 cut(s) 857
AgsI TTSAA 7 cut(s) 242, 461, 1142, 1244, 1273, 1404, 1534
AhlI ACTAGT 2 cut(s) 368, 1246
AjnI CCWGG 4 cut(s) 60, 732, 1622, 1740
AjuI GAANNNNNNNTTGG 2 cut(s) 123, 155
AleI CACNNNNGTG 1 cut(s) 1493
AluBI AGCT 8 cut(s) 197, 499, 554, 575, 583, 884, 1009, 1530
AluI AGCT 8 cut(s) 197, 499, 554, 575, 583, 884, 1009, 1530
Alw21I GWGCWC 1 cut(s) 1319
Alw44I GTGCAC 1 cut(s) 1315
AlwI GGATC 1 cut(s) 1163
AoxI GGCC 4 cut(s) 945, 1157, 1658, 1686
ApaLI GTGCAC 1 cut(s) 1315
ApeKI GCWGC 2 cut(s) 314, 662
ApoI RAATTY 4 cut(s) 154, 1162, 1268, 1430
ArsI GACNNNNNNTTYG 2 cut(s) 1415, 1447
Asp700I GAANNNNTTC 1 cut(s) 1369
AspLEI GCGC 1 cut(s) 1747
AspS9I GGNCC 4 cut(s) 302, 518, 602, 1620
AsuC2I CCSGG 1 cut(s) 1410
AsuHPI GGTGA 6 cut(s) 119, 1193, 1320, 1444, 1480, 1563
AsuII TTCGAA 1 cut(s) 922
AvaII GGWCC 4 cut(s) 302, 518, 602, 1620
BaeGI GKGCMC 1 cut(s) 1319
BaeI ACNNNNGTAYC 2 cut(s) 1021, 1054
BanI GGYRCC 1 cut(s) 1744
BbsI GAAGAC 1 cut(s) 1112
Bbv12I GWGCWC 1 cut(s) 1319
BbvI GCAGC 2 cut(s) 326, 674
BccI CCATC 5 cut(s) 255, 326, 623, 1351, 1607
BceAI ACGGC 1 cut(s) 231
BciT130I CCWGG 4 cut(s) 62, 734, 1624, 1742
BclI TGATCA 1 cut(s) 811
BcnI CCSGG 1 cut(s) 1410
BcuI ACTAGT 2 cut(s) 368, 1246
BfaI CTAG 5 cut(s) 369, 885, 1247, 1257, 1512
BfmI CTRYAG 3 cut(s) 610, 660, 1446
BfoI RGCGCY 1 cut(s) 1748
BfuAI ACCTGC 3 cut(s) 44, 167, 313
BisI GCNGC 3 cut(s) 315, 663, 1661
BlpI GCTNAGC 1 cut(s) 1005
BlsI GCNGC 3 cut(s) 316, 664, 1662
Bme1390I CCNGG 5 cut(s) 62, 734, 1410, 1624, 1742
Bme18I GGWCC 4 cut(s) 302, 518, 602, 1620
BmgT120I GGNCC 4 cut(s) 302, 518, 602, 1620
BmiI GGNNCC 2 cut(s) 776, 1746
BmrFI CCNGG 5 cut(s) 62, 734, 1410, 1624, 1742
BmrI ACTGGG 1 cut(s) 396
BmsI GCATC 1 cut(s) 674
BmuI ACTGGG 1 cut(s) 396
BoxI GACNNNNGTC 1 cut(s) 1112
BpiI GAAGAC 1 cut(s) 1112
BpmI CTGGAG 2 cut(s) 815, 1653
Bpu10I CCTNAGC 1 cut(s) 285
Bpu1102I GCTNAGC 1 cut(s) 1005
Bpu14I TTCGAA 1 cut(s) 922
BpuMI CCSGG 1 cut(s) 1410
BsaHI GRCGYC 1 cut(s) 1745
BsaJI CCNNGG 1 cut(s) 673
BsaWI WCCGGW 1 cut(s) 331
BsaXI ACNNNNNCTCC 2 cut(s) 1626, 1656
Bsc4I CCNNNNNNNGG 5 cut(s) 290, 1048, 1178, 1360, 1754
Bse1I ACTGG 7 cut(s) 17, 391, 685, 948, 1430, 1473, 1636
Bse3DI GCAATG 1 cut(s) 1735
BseBI CCWGG 4 cut(s) 62, 734, 1624, 1742
BseDI CCNNGG 1 cut(s) 673
BseGI GGATG 5 cut(s) 20, 665, 975, 1343, 1705
BseLI CCNNNNNNNGG 5 cut(s) 290, 1048, 1178, 1360, 1754
BseMI GCAATG 1 cut(s) 1735
BseMII CTCAG 3 cut(s) 276, 687, 750
BseNI ACTGG 7 cut(s) 17, 391, 685, 948, 1430, 1473, 1636
BseSI GKGCMC 1 cut(s) 1319
BseXI GCAGC 2 cut(s) 326, 674
BsgI GTGCAG 1 cut(s) 739
BshFI GGCC 4 cut(s) 947, 1159, 1660, 1688
BshNI GGYRCC 1 cut(s) 1744
BsiHKAI GWGCWC 1 cut(s) 1319
BsiSI CCGG 2 cut(s) 332, 1410
BslFI GGGAC 2 cut(s) 283, 1336
BslI CCNNNNNNNGG 5 cut(s) 290, 1048, 1178, 1360, 1754
BsmFI GGGAC 2 cut(s) 283, 1336
BsmI GAATGC 2 cut(s) 138, 1371
BsnI GGCC 4 cut(s) 947, 1159, 1660, 1688
Bsp119I TTCGAA 1 cut(s) 922
Bsp1286I GDGCHC 1 cut(s) 1319
Bsp1407I TGTACA 1 cut(s) 928
Bsp143I GATC 3 cut(s) 811, 1168, 1676
Bsp1720I GCTNAGC 1 cut(s) 1005
BspACI CCGC 3 cut(s) 289, 1049, 1661
BspANI GGCC 4 cut(s) 947, 1159, 1660, 1688
BspCNI CTCAG 3 cut(s) 277, 688, 751
BspHI TCATGA 1 cut(s) 904
BspLI GGNNCC 2 cut(s) 776, 1746
BspMAI CTGCAG 1 cut(s) 664
BspMI ACCTGC 3 cut(s) 44, 167, 313
BspPI GGATC 1 cut(s) 1163
BspQI GCTCTTC 1 cut(s) 489
BspT104I TTCGAA 1 cut(s) 922
BspT107I GGYRCC 1 cut(s) 1744
BsrBI CCGCTC 1 cut(s) 289
BsrDI GCAATG 1 cut(s) 1735
BsrGI TGTACA 1 cut(s) 928
BsrI ACTGG 7 cut(s) 17, 391, 685, 948, 1430, 1473, 1636
BssECI CCNNGG 1 cut(s) 673
BssMI GATC 3 cut(s) 811, 1168, 1676
BssNAI GTATAC 1 cut(s) 281
BssNI GRCGYC 1 cut(s) 1745
BssT1I CCWWGG 1 cut(s) 673
Bst1107I GTATAC 1 cut(s) 281
Bst2UI CCWGG 4 cut(s) 62, 734, 1624, 1742
Bst4CI ACNGT 5 cut(s) 349, 806, 1396, 1450, 1475
Bst6I CTCTTC 2 cut(s) 489, 628
BstACI GRCGYC 1 cut(s) 1745
BstAUI TGTACA 1 cut(s) 928
BstBI TTCGAA 1 cut(s) 922
BstDEI CTNAG 5 cut(s) 285, 623, 696, 759, 1005
BstF5I GGATG 5 cut(s) 20, 665, 975, 1343, 1705
BstH2I RGCGCY 1 cut(s) 1748
BstHHI GCGC 1 cut(s) 1747
BstKTI GATC 3 cut(s) 814, 1171, 1679
BstMBI GATC 3 cut(s) 811, 1168, 1676
BstMWI GCNNNNNNNGC 2 cut(s) 314, 323
BstNI CCWGG 4 cut(s) 62, 734, 1624, 1742
BstPAI GACNNNNGTC 1 cut(s) 1112
BstSCI CCNGG 5 cut(s) 60, 732, 1408, 1622, 1740
BstSFI CTRYAG 3 cut(s) 610, 660, 1446
BstSLI GKGCMC 1 cut(s) 1319
BstV1I GCAGC 2 cut(s) 326, 674
BstV2I GAAGAC 1 cut(s) 1112
BstZ17I GTATAC 1 cut(s) 281
BsuRI GGCC 4 cut(s) 947, 1159, 1660, 1688
BtgZI GCGATG 1 cut(s) 1653
BtsCI GGATG 5 cut(s) 20, 665, 975, 1343, 1705
BtsIMutI CAGTG 2 cut(s) 328, 756
BveI ACCTGC 3 cut(s) 44, 167, 313
CciI TCATGA 1 cut(s) 904
CfoI GCGC 1 cut(s) 1747
Cfr13I GGNCC 4 cut(s) 302, 518, 602, 1620
CsiI ACCWGGT 1 cut(s) 732
Csp6I GTAC 5 cut(s) 294, 745, 929, 1038, 1551
CviAII CATG 6 cut(s) 221, 905, 1043, 1084, 1223, 1348
CviQI GTAC 5 cut(s) 294, 745, 929, 1038, 1551
DdeI CTNAG 5 cut(s) 285, 623, 696, 759, 1005
DinI GGCGCC 1 cut(s) 1746
DpnI GATC 3 cut(s) 813, 1170, 1678
DpnII GATC 3 cut(s) 811, 1168, 1676
DraI TTTAAA 1 cut(s) 840
DraIII CACNNNGTG 1 cut(s) 626
DrdI GACNNNNNNGTC 1 cut(s) 971
DseDI GACNNNNNNGTC 1 cut(s) 971
Eam1104I CTCTTC 2 cut(s) 489, 628
EarI CTCTTC 2 cut(s) 489, 628
Eco130I CCWWGG 1 cut(s) 673
Eco32I GATATC 1 cut(s) 987
Eco47I GGWCC 4 cut(s) 302, 518, 602, 1620
EcoRI GAATTC 1 cut(s) 1268
EcoRII CCWGG 4 cut(s) 60, 732, 1622, 1740
EcoRV GATATC 1 cut(s) 987
EcoT14I CCWWGG 1 cut(s) 673
EgeI GGCGCC 1 cut(s) 1746
EheI GGCGCC 1 cut(s) 1746
ErhI CCWWGG 1 cut(s) 673
FaeI CATG 6 cut(s) 224, 908, 1046, 1087, 1226, 1351
FaqI GGGAC 2 cut(s) 283, 1336
FatI CATG 6 cut(s) 220, 904, 1042, 1083, 1222, 1347
FauI CCCGC 2 cut(s) 282, 1042
FbaI TGATCA 1 cut(s) 811
FblI GTMKAC 1 cut(s) 280
Fnu4HI GCNGC 3 cut(s) 315, 663, 1661
FokI GGATG 5 cut(s) 7, 652, 962, 1330, 1712
Fsp4HI GCNGC 3 cut(s) 315, 663, 1661
FspBI CTAG 5 cut(s) 369, 885, 1247, 1257, 1512
GlaI GCGC 1 cut(s) 1746
GluI GCNGC 3 cut(s) 315, 663, 1661
GsuI CTGGAG 2 cut(s) 815, 1653
HaeII RGCGCY 1 cut(s) 1748
HaeIII GGCC 4 cut(s) 947, 1159, 1660, 1688
HapII CCGG 2 cut(s) 332, 1410
HhaI GCGC 1 cut(s) 1747
Hin1I GRCGYC 1 cut(s) 1745
Hin1II CATG 6 cut(s) 224, 908, 1046, 1087, 1226, 1351
Hin6I GCGC 1 cut(s) 1745
HinP1I GCGC 1 cut(s) 1745
HincII GTYRAC 1 cut(s) 855
HindII GTYRAC 1 cut(s) 855
HindIII AAGCTT 2 cut(s) 581, 1007
HinfI GANTC 3 cut(s) 750, 911, 1253
HpaII CCGG 2 cut(s) 332, 1410
HphI GGTGA 6 cut(s) 119, 1193, 1320, 1444, 1480, 1563
Hpy166II GTNNAC 6 cut(s) 281, 855, 931, 1091, 1252, 1317
Hpy8I GTNNAC 6 cut(s) 281, 855, 931, 1091, 1252, 1317
HpyAV CCTTC 2 cut(s) 371, 937
HpyCH4III ACNGT 5 cut(s) 349, 806, 1396, 1450, 1475
HpyCH4IV ACGT 2 cut(s) 859, 1494
HpyCH4V TGCA 8 cut(s) 53, 314, 662, 721, 756, 1070, 1222, 1317
HpyF10VI GCNNNNNNNGC 2 cut(s) 314, 323
HpyF3I CTNAG 5 cut(s) 285, 623, 696, 759, 1005
HpySE526I ACGT 2 cut(s) 859, 1494
Hsp92I GRCGYC 1 cut(s) 1745
Hsp92II CATG 6 cut(s) 224, 908, 1046, 1087, 1226, 1351
HspAI GCGC 1 cut(s) 1745
KasI GGCGCC 1 cut(s) 1744
Ksp22I TGATCA 1 cut(s) 811
Kzo9I GATC 3 cut(s) 811, 1168, 1676
LguI GCTCTTC 1 cut(s) 489
LmnI GCTCC 2 cut(s) 194, 780
Lsp1109I GCAGC 2 cut(s) 326, 674
LweI GCATC 1 cut(s) 674
MabI ACCWGGT 1 cut(s) 732
MaeI CTAG 5 cut(s) 369, 885, 1247, 1257, 1512
MaeII ACGT 2 cut(s) 859, 1494
MaeIII GTNAC 9 cut(s) 353, 691, 1387, 1396, 1412, 1450, 1486, 1495, 1812
MalI GATC 3 cut(s) 813, 1170, 1678
MbiI CCGCTC 1 cut(s) 289
MboI GATC 3 cut(s) 811, 1168, 1676
MfeI CAATTG 3 cut(s) 653, 1056, 1217
MhlI GDGCHC 1 cut(s) 1319
Mly113I GGCGCC 1 cut(s) 1745
MlyI GAGTC 1 cut(s) 1247
MmeI TCCRAC 2 cut(s) 389, 496
MroXI GAANNNNTTC 1 cut(s) 1369
MseI TTAA 6 cut(s) 768, 839, 864, 893, 1442, 1772
MslI CAYNNNNRTG 2 cut(s) 936, 1493
MspI CCGG 2 cut(s) 332, 1410
MspR9I CCNGG 5 cut(s) 62, 734, 1410, 1624, 1742
MunI CAATTG 3 cut(s) 653, 1056, 1217
Mva1269I GAATGC 2 cut(s) 138, 1371
MvaI CCWGG 4 cut(s) 62, 734, 1624, 1742
MwoI GCNNNNNNNGC 2 cut(s) 314, 323
NarI GGCGCC 1 cut(s) 1745
NciI CCSGG 1 cut(s) 1410
NdeII GATC 3 cut(s) 811, 1168, 1676
NlaIII CATG 6 cut(s) 224, 908, 1046, 1087, 1226, 1351
NlaIV GGNNCC 2 cut(s) 776, 1746
NmuCI GTSAC 5 cut(s) 1387, 1450, 1486, 1495, 1812
NspV TTCGAA 1 cut(s) 922
OliI CACNNNNGTG 1 cut(s) 1493
PagI TCATGA 1 cut(s) 904
PciSI GCTCTTC 1 cut(s) 489
PcsI WCGNNNNNNNCGW 1 cut(s) 1624
PctI GAATGC 2 cut(s) 138, 1371
PdmI GAANNNNTTC 1 cut(s) 1369
PfeI GAWTC 2 cut(s) 750, 911
PkrI GCNGC 3 cut(s) 316, 664, 1662
PleI GAGTC 1 cut(s) 1247
PluTI GGCGCC 1 cut(s) 1748
PpsI GAGTC 1 cut(s) 1247
PshAI GACNNNNGTC 1 cut(s) 1112
Psp6I CCWGG 4 cut(s) 60, 732, 1622, 1740
PspGI CCWGG 4 cut(s) 60, 732, 1622, 1740
PspN4I GGNNCC 2 cut(s) 776, 1746
PspPI GGNCC 4 cut(s) 302, 518, 602, 1620
PsrI GAACNNNNNNTAC 2 cut(s) 414, 446
PstI CTGCAG 1 cut(s) 664
RsaI GTAC 5 cut(s) 295, 746, 930, 1039, 1552
RsaNI GTAC 5 cut(s) 294, 745, 929, 1038, 1551
RseI CAYNNNNRTG 2 cut(s) 936, 1493
SapI GCTCTTC 1 cut(s) 489
SaqAI TTAA 6 cut(s) 768, 839, 864, 893, 1442, 1772
SatI GCNGC 3 cut(s) 315, 663, 1661
Sau3AI GATC 3 cut(s) 811, 1168, 1676
Sau96I GGNCC 4 cut(s) 302, 518, 602, 1620
SchI GAGTC 1 cut(s) 1247
ScrFI CCNGG 5 cut(s) 62, 734, 1410, 1624, 1742
SduI GDGCHC 1 cut(s) 1319
SexAI ACCWGGT 1 cut(s) 732
SfaNI GCATC 1 cut(s) 674
SfcI CTRYAG 3 cut(s) 610, 660, 1446
SfoI GGCGCC 1 cut(s) 1746
SfuI TTCGAA 1 cut(s) 922
SinI GGWCC 4 cut(s) 302, 518, 602, 1620
SmiMI CAYNNNNRTG 2 cut(s) 936, 1493
SpeI ACTAGT 2 cut(s) 368, 1246
SsiI CCGC 3 cut(s) 289, 1049, 1661
SspDI GGCGCC 1 cut(s) 1744
SspI AATATT 1 cut(s) 955
SspMI CTAG 5 cut(s) 369, 885, 1247, 1257, 1512
StyD4I CCNGG 5 cut(s) 60, 732, 1408, 1622, 1740
StyI CCWWGG 1 cut(s) 673
TaaI ACNGT 5 cut(s) 349, 806, 1396, 1450, 1475
TaiI ACGT 2 cut(s) 862, 1497
TaqI TCGA 2 cut(s) 922, 1203
TaqII GACCGA 1 cut(s) 1608
TatI WGTACW 2 cut(s) 928, 1550
TauI GCSGC 1 cut(s) 1663
TfiI GAWTC 2 cut(s) 750, 911
Tru1I TTAA 6 cut(s) 768, 839, 864, 893, 1442, 1772
Tru9I TTAA 6 cut(s) 768, 839, 864, 893, 1442, 1772
TscAI CASTG 2 cut(s) 328, 763
TseFI GTSAC 5 cut(s) 1387, 1450, 1486, 1495, 1812
TseI GCWGC 2 cut(s) 314, 662
Tsp45I GTSAC 5 cut(s) 1387, 1450, 1486, 1495, 1812
TspDTI ATGAA 7 cut(s) 328, 585, 893, 921, 1239, 1577, 1724
TspGWI ACGGA 1 cut(s) 762
TspRI CASTG 2 cut(s) 328, 763
VneI GTGCAC 1 cut(s) 1315
VpaK11BI GGWCC 4 cut(s) 302, 518, 602, 1620
XapI RAATTY 4 cut(s) 154, 1162, 1268, 1430
XbaI TCTAGA 1 cut(s) 1256
XcmI CCANNNNNNNNNTGG 1 cut(s) 106
XmiI GTMKAC 1 cut(s) 280
XmnI GAANNNNTTC 1 cut(s) 1369
XspI CTAG 5 cut(s) 369, 885, 1247, 1257, 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.