Rmu_sc0001296.1_g000001

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001296.1
Physical Location & Seq
Reverse (-)
1293 .. 2773
1481 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001296.1_g000001.1.cds

Sequence Viewer

Length: 558 bp
atggctatacgttttcccagttggcaactacctatgaatttgagaatgaagcagcaaccatctctttcagtcttcttgttctgcctctgcttcctgggttccacttggtttcaagtttccacggctgaaaatgccactactgacccatctgaagttcgagcgttgaactcaatattctcacaatgggatactcaagcggtggcgctgtggaatatcagtggagagccatgcagtggatcagccatcaatggaaccgaatttgagagccctcctaataacccagccatcatttgcgactgtacttatgacagtggcaccacctgccacattacccaactgagagtctatgctctaaacaaacgaggagtgtttgcaaaggaacttttggctttcagatacctgaccttcttgaaaatcgatcagaattatttcacaggtcctctaccagcatggatcggcaatatgactgcattgacattattgtcaattgctcacaatgcattctctgggcccattcccaaggagcttggaaacctcaagaacttaaatatgctgtaa

Protein Analysis

185

Amino Acids

20.58

Weight (kDa)

6.7

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 329
AasI GACNNNNNNGTC 1 cut(s) 481
Acc36I ACCTGC 1 cut(s) 329
AccB1I GGYRCC 1 cut(s) 314
AccB7I CCANNNNNTGG 1 cut(s) 233
AciI CCGC 1 cut(s) 197
AclWI GGATC 2 cut(s) 244, 461
AcsI RAATTY 2 cut(s) 37, 257
AcuI CTGAAG 1 cut(s) 171
AfaI GTAC 1 cut(s) 301
AfiI CCNNNNNNNGG 1 cut(s) 233
AgsI TTSAA 3 cut(s) 113, 166, 412
AjnI CCWGG 1 cut(s) 93
AluBI AGCT 1 cut(s) 526
AluI AGCT 1 cut(s) 526
AlwI GGATC 2 cut(s) 244, 461
AoxI GGCC 1 cut(s) 509
ApaI GGGCCC 1 cut(s) 513
ApeKI GCWGC 1 cut(s) 52
ApoI RAATTY 2 cut(s) 37, 257
Asp700I GAANNNNTTC 1 cut(s) 428
AspLEI GCGC 1 cut(s) 205
AspS9I GGNCC 3 cut(s) 437, 509, 510
AvaII GGWCC 1 cut(s) 437
BaeGI GKGCMC 1 cut(s) 513
BanI GGYRCC 1 cut(s) 314
BanII GRGCYC 2 cut(s) 269, 513
BbsI GAAGAC 1 cut(s) 64
BbvI GCAGC 1 cut(s) 64
BccI CCATC 4 cut(s) 67, 154, 251, 293
BceAI ACGGC 1 cut(s) 138
BciT130I CCWGG 1 cut(s) 95
BciVI GTATCC 1 cut(s) 181
BfoI RGCGCY 1 cut(s) 206
BfuAI ACCTGC 1 cut(s) 329
BfuI GTATCC 1 cut(s) 181
BisI GCNGC 1 cut(s) 53
BlsI GCNGC 1 cut(s) 54
Bme1390I CCNGG 1 cut(s) 95
Bme18I GGWCC 1 cut(s) 437
BmgT120I GGNCC 3 cut(s) 437, 509, 510
BmiI GGNNCC 4 cut(s) 100, 253, 316, 511
BmrFI CCNGG 1 cut(s) 95
BmrI ACTGGG 1 cut(s) 12
BmuI ACTGGG 1 cut(s) 12
BpiI GAAGAC 1 cut(s) 64
BpuEI CTTGAG 2 cut(s) 177, 521
Bsa29I ATCGAT 1 cut(s) 417
BsaJI CCNNGG 3 cut(s) 94, 120, 519
Bsc4I CCNNNNNNNGG 1 cut(s) 233
Bse1I ACTGG 1 cut(s) 18
BseBI CCWGG 1 cut(s) 95
BseCI ATCGAT 1 cut(s) 417
BseDI CCNNGG 3 cut(s) 94, 120, 519
BseLI CCNNNNNNNGG 1 cut(s) 233
BseMII CTCAG 1 cut(s) 329
BseNI ACTGG 1 cut(s) 18
BseRI GAGGAG 1 cut(s) 378
BseSI GKGCMC 1 cut(s) 513
BseXI GCAGC 1 cut(s) 64
BseYI CCCAGC 1 cut(s) 280
BshFI GGCC 1 cut(s) 511
BshNI GGYRCC 1 cut(s) 314
BshVI ATCGAT 1 cut(s) 417
BslI CCNNNNNNNGG 1 cut(s) 233
BsmI GAATGC 1 cut(s) 500
BsnI GGCC 1 cut(s) 511
Bsp120I GGGCCC 1 cut(s) 509
Bsp1286I GDGCHC 2 cut(s) 269, 513
Bsp143I GATC 3 cut(s) 236, 418, 453
BspACI CCGC 1 cut(s) 197
BspANI GGCC 1 cut(s) 511
BspCNI CTCAG 1 cut(s) 330
BspDI ATCGAT 1 cut(s) 417
BspLI GGNNCC 4 cut(s) 100, 253, 316, 511
BspMI ACCTGC 1 cut(s) 329
BspPI GGATC 2 cut(s) 244, 461
BspT107I GGYRCC 1 cut(s) 314
BsrI ACTGG 1 cut(s) 18
BssECI CCNNGG 3 cut(s) 94, 120, 519
BssMI GATC 3 cut(s) 236, 418, 453
BssT1I CCWWGG 1 cut(s) 519
Bst2UI CCWGG 1 cut(s) 95
Bst4CI ACNGT 2 cut(s) 299, 311
BstAPI GCANNNNNTGC 1 cut(s) 321
BstDEI CTNAG 1 cut(s) 338
BstDSI CCRYGG 1 cut(s) 120
BstH2I RGCGCY 1 cut(s) 206
BstHHI GCGC 1 cut(s) 205
BstKTI GATC 3 cut(s) 239, 421, 456
BstMBI GATC 3 cut(s) 236, 418, 453
BstMWI GCNNNNNNNGC 3 cut(s) 131, 321, 497
BstNI CCWGG 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 93
BstSLI GKGCMC 1 cut(s) 513
BstV1I GCAGC 1 cut(s) 64
BstV2I GAAGAC 1 cut(s) 64
Bsu15I ATCGAT 1 cut(s) 417
BsuI GTATCC 1 cut(s) 181
BsuRI GGCC 1 cut(s) 511
BsuTUI ATCGAT 1 cut(s) 417
BtgI CCRYGG 1 cut(s) 120
BtsI GCAGTG 1 cut(s) 238
BtsIMutI CAGTG 3 cut(s) 223, 238, 316
BveI ACCTGC 1 cut(s) 329
CfoI GCGC 1 cut(s) 205
Cfr13I GGNCC 3 cut(s) 437, 509, 510
ClaI ATCGAT 1 cut(s) 417
Csp6I GTAC 1 cut(s) 300
CviAII CATG 2 cut(s) 228, 450
CviJI RGCY 9 cut(s) 5, 125, 226, 242, 267, 284, 389, 511, 526
CviKI_1 RGCY 9 cut(s) 5, 125, 226, 242, 267, 284, 389, 511, 526
CviQI GTAC 1 cut(s) 300
DdeI CTNAG 1 cut(s) 338
DpnI GATC 3 cut(s) 238, 420, 455
DpnII GATC 3 cut(s) 236, 418, 453
DrdI GACNNNNNNGTC 1 cut(s) 481
DseDI GACNNNNNNGTC 1 cut(s) 481
Eco130I CCWWGG 1 cut(s) 519
Eco24I GRGCYC 2 cut(s) 269, 513
Eco47I GGWCC 1 cut(s) 437
Eco57I CTGAAG 1 cut(s) 171
EcoO109I RGGNCCY 1 cut(s) 437
EcoRII CCWGG 1 cut(s) 93
EcoT14I CCWWGG 1 cut(s) 519
EcoT22I ATGCAT 1 cut(s) 502
EcoT38I GRGCYC 2 cut(s) 269, 513
ErhI CCWWGG 1 cut(s) 519
FaeI CATG 2 cut(s) 231, 453
FaiI YATR 8 cut(s) 8, 35, 229, 306, 348, 451, 464, 551
FatI CATG 2 cut(s) 227, 449
Fnu4HI GCNGC 1 cut(s) 53
FriOI GRGCYC 2 cut(s) 269, 513
Fsp4HI GCNGC 1 cut(s) 53
GlaI GCGC 1 cut(s) 204
GluI GCNGC 1 cut(s) 53
GsaI CCCAGC 1 cut(s) 284
HaeII RGCGCY 1 cut(s) 206
HaeIII GGCC 1 cut(s) 511
HhaI GCGC 1 cut(s) 205
Hin1II CATG 2 cut(s) 231, 453
Hin6I GCGC 1 cut(s) 203
HinP1I GCGC 1 cut(s) 203
HinfI GANTC 1 cut(s) 342
Hpy188I TCNGA 3 cut(s) 151, 395, 423
Hpy188III TCNNGA 2 cut(s) 409, 538
HpyAV CCTTC 1 cut(s) 415
HpyCH4III ACNGT 2 cut(s) 299, 311
HpyCH4IV ACGT 1 cut(s) 10
HpyCH4V TGCA 4 cut(s) 231, 374, 470, 500
HpyF10VI GCNNNNNNNGC 3 cut(s) 131, 321, 497
HpyF3I CTNAG 1 cut(s) 338
HpySE526I ACGT 1 cut(s) 10
Hsp92II CATG 2 cut(s) 231, 453
HspAI GCGC 1 cut(s) 203
Kzo9I GATC 3 cut(s) 236, 418, 453
LmnI GCTCC 1 cut(s) 523
LpnPI CCDG 9 cut(s) 31, 80, 107, 294, 334, 413, 420, 459, 492
Lsp1109I GCAGC 1 cut(s) 64
MaeII ACGT 1 cut(s) 10
MalI GATC 3 cut(s) 238, 420, 455
MboI GATC 3 cut(s) 236, 418, 453
MboII GAAGA 1 cut(s) 64
MfeI CAATTG 1 cut(s) 486
MhlI GDGCHC 2 cut(s) 269, 513
MluCI AATT 4 cut(s) 37, 257, 424, 486
MlyI GAGTC 1 cut(s) 351
MnlI CCTC 5 cut(s) 95, 279, 356, 450, 545
Mph1103I ATGCAT 1 cut(s) 502
MroXI GAANNNNTTC 1 cut(s) 428
MseI TTAA 1 cut(s) 545
MspR9I CCNGG 1 cut(s) 95
MunI CAATTG 1 cut(s) 486
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 1 cut(s) 95
MwoI GCNNNNNNNGC 3 cut(s) 131, 321, 497
NdeII GATC 3 cut(s) 236, 418, 453
NlaIII CATG 2 cut(s) 231, 453
NlaIV GGNNCC 4 cut(s) 100, 253, 316, 511
NsiI ATGCAT 1 cut(s) 502
PaqCI CACCTGC 1 cut(s) 329
PctI GAATGC 1 cut(s) 500
PdmI GAANNNNTTC 1 cut(s) 428
PflMI CCANNNNNTGG 1 cut(s) 233
PkrI GCNGC 1 cut(s) 54
PleI GAGTC 1 cut(s) 350
PpsI GAGTC 1 cut(s) 350
PpuMI RGGWCCY 1 cut(s) 437
Psp5II RGGWCCY 1 cut(s) 437
Psp6I CCWGG 1 cut(s) 93
PspFI CCCAGC 1 cut(s) 280
PspGI CCWGG 1 cut(s) 93
PspN4I GGNNCC 4 cut(s) 100, 253, 316, 511
PspOMI GGGCCC 1 cut(s) 509
PspPI GGNCC 3 cut(s) 437, 509, 510
PspPPI RGGWCCY 1 cut(s) 437
RsaI GTAC 1 cut(s) 301
RsaNI GTAC 1 cut(s) 300
SaqAI TTAA 1 cut(s) 545
SatI GCNGC 1 cut(s) 53
Sau3AI GATC 3 cut(s) 236, 418, 453
Sau96I GGNCC 3 cut(s) 437, 509, 510
SchI GAGTC 1 cut(s) 351
ScrFI CCNGG 1 cut(s) 95
SduI GDGCHC 2 cut(s) 269, 513
SetI ASST 8 cut(s) 13, 34, 323, 402, 407, 439, 528, 537
SinI GGWCC 1 cut(s) 437
SmlI CTYRAG 2 cut(s) 192, 536
SmoI CTYRAG 2 cut(s) 192, 536
Sse9I AATT 4 cut(s) 37, 257, 424, 486
SsiI CCGC 1 cut(s) 197
SspI AATATT 1 cut(s) 174
StyD4I CCNGG 1 cut(s) 93
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 2 cut(s) 299, 311
TaiI ACGT 1 cut(s) 13
TaqI TCGA 2 cut(s) 157, 417
TasI AATT 4 cut(s) 37, 257, 424, 486
TatI WGTACW 1 cut(s) 299
Tru1I TTAA 1 cut(s) 545
Tru9I TTAA 1 cut(s) 545
TscAI CASTG 3 cut(s) 223, 238, 316
TseI GCWGC 1 cut(s) 52
TspDTI ATGAA 2 cut(s) 50, 62
TspRI CASTG 3 cut(s) 223, 238, 316
Van91I CCANNNNNTGG 1 cut(s) 233
VpaK11BI GGWCC 1 cut(s) 437
XapI RAATTY 2 cut(s) 37, 257
XmnI GAANNNNTTC 1 cut(s) 428
Zsp2I ATGCAT 1 cut(s) 502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.