Rmu_sc0000370.1_g000013
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000370.1
OG0000088
Physical Location & Seq
Forward (+)
48287 .. 57428
9142 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000370.1_g000013.1.cds

Sequence Viewer

Length: 3234 bp
atgtcacctcgtcttctttgtttcagacttgagagcccaaaaggctttgtgcaggtacagatcgtctttttcgactctgttgctactttgatcaccctggctctaaacccagtttcactgtgtccctcagtttccatgtcaaccaagatgaaagcattcatgtcagggagtgcctccccatcagttttggtcttatttttgtgcatctctggtatagcacaagctcaagtttctgctcctgctcctcaacctcaagctactaatgccaccactgacccatctcaagcgagagctttgaattcagtgtttgagaaatggaatattcgggccaatccgaagcaatggaacacaaccggagacccgtgcactggagctgccatagacttcagtcactccaccaaatttgatgaccccgtttacaaccccttcatcatctgtgactgctcttatcaatccggcaccatttgccacattacccaactgaaagttcagaacttgggagttgttggtgtaattccagacgagttatggagtttgaattccctcaccaatctgaatttggaaaggaattgcctgacgggacccctctctgcagccattgcaaatctaactggcttgcaatactttactattggcatcaacgatttatcaggcgagataccaaaagaaattggacaacttactgaattgagatcattggcttttgggagaaacaacttttcgggttctctgccatctgagctagggaatttattcaacttacagcagctttacgttgatagttgtggagttagtggtgagattccaccaacatttgctaatctacaaaacttggagattttttgggctagaaacgttgaactgtctggcaggataccagacttcatagggaatttgtcaaagcttacttccttgaggtttcaaggaaactctttcgaaggtcctataccatttgcattttccaatctgactactattaaagagctacgcattagtgatttgtcgaatgccaatgggagctcttctcttgcatttattgagaatatgaaggctctagatatcttggtgctgaggaataacaatatttctgattcaattccctccgattttggattataccaaagtttgtctcagctgtttcttggaaacaataagttgaatggcacccttcctgagtataagacagcacctcttctcaatatgtttcttggaaacaataagttgaatggcacccttcctgagtataagacagcatctcttctcaatattggtcttccttcagggttggcttgccttcaaagaaactttccttgcaatcgtggccctggaatctattataattttgggattaattgtggaggacctgagtttacgtcttcctccgatgggattgtgtatgagaaggaaaatgagcccctaggaccagcttcatattttgtgactggcacaggcagatggggagttagcaatgtcggatatttcactgacagtaccaatcctcagtatacaagtttctccttatctcaattcacaaatacttttgattctgtgctattccagactgcaaggctctctgcttcatcaattagatactttggcttggggcttgagaatggtaactacaccgtgaacctcaagtttgcagaacatgtcattctggctgctactaccgggaaatttcttgggagacgtctttttgatatttatatccagggcattctggtatcaaagaattttgatatactaaaggaggcaggcatgtcatcttttggagctgttcagaagccatacacggctcatgtttcggagaactaccttgaaatccatctgttttgggctcgaaaggggacttgctgtatccctgagcggggtacttatggacctgctattgcagccatcagtgctacaccggatttcatacctattgtcagtaacaaccctccaactagtaagaagaatagaactgggcagattgttgggattgttgtgggtggtggagtacttttggttctgttgtttgtggctttttatcttattcaaagaagaaaaaggtctgaccctgatgatgacgaagagctgtacgggatagatgttggaccacttaccttcagttatcctgaactaaagacagctacaaacgactttgatgaagctcataagcttggagagggcggatttggacctgtctatagaggaacacttagtgatggaagagtaattgctgtgaagcaattgtctgcagcatcccaccaaggaaagaaccagtttgtaactgagattgccactatatctgctgtgcaacacaataacctcgtaaagttgtacggattctgcactgagggagttaaaaggctccttgtctatgagtatctggagaacaacagtcttgatcaagcattatttggagagagacgtttaaatcttgattggtcaacacgttttaatatatgcttgggcatagctagaggtttaacttatcttcatgaagaatcaagggttcgaattgtacacagagatgtgaaggccagtaatattctacttgacactagtctcatccccaagttatcggactttggtttggctaagctttttgatgagaaaaagacccacataagtacccatgttgcgggaacaattgggtatcttgcaccggaatatgccatgcgtggacaccttacagagaagactgatgtctttgcctttggtgttctggctcttgaaattatcagtggtaggccaaattctgatccgagtttgggtgaagaaatgacttatcttctcgaatgggcttggcaattgcatgaaaacagacgggcagttgaactagtggactctagattatctgaattcaatgaggaagaagcacaacgaataatcaaaataggacttttgtgcactcaaacatcgccaatgctacgaccatccatgtcccgtgtagtgggaatgctttcaggagatatggaagtgacaacagtaacttcaaagcccggttacttgactgactggaaatttgatgatttaactacagtcaccagcctaacaaaactggacggtgtaagtattgtcaccaacgtgactgatatgacgactagaggaactgattttagcttcaacgactcattagcaagtacaagcataatggggcaatcacctcctaatgccattcattctatgtctaaaaataaggaatcgagtggtacgtccctaaagatcgattgttatcattttctttga

Protein Analysis

1077

Amino Acids

118.07

Weight (kDa)

5.84

Isoelectric Point (pI)

35.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1338
AatII GACGTC 1 cut(s) 1693
Acc36I ACCTGC 2 cut(s) 43, 1891
AccB1I GGYRCC 3 cut(s) 458, 1163, 1229
AccBSI CCGCTC 1 cut(s) 1867
AccI GTMKAC 1 cut(s) 1505
AciI CCGC 3 cut(s) 1867, 2172, 2627
AclI AACGTT 1 cut(s) 855
AclWI GGATC 1 cut(s) 2741
AcuI CTGAAG 3 cut(s) 370, 1263, 2092
AcyI GRCGYC 1 cut(s) 1690
AdeI CACNNNGTG 1 cut(s) 2204
AfiI CCNNNNNNNGG 7 cut(s) 368, 1386, 1867, 1868, 2626, 2756, 2938
AflIII ACRYGT 2 cut(s) 1648, 2435
AhlI ACTAGT 3 cut(s) 1946, 2546, 2824
AjnI CCWGG 3 cut(s) 96, 1324, 1710
AjuI GAANNNNNNNTTGG 2 cut(s) 471, 503
AleI CACNNNNGTG 1 cut(s) 3071
Alw21I GWGCWC 3 cut(s) 368, 1022, 2897
Alw26I GTCTC 5 cut(s) 351, 1134, 1681, 2404, 2555
Alw44I GTGCAC 2 cut(s) 364, 2893
AlwI GGATC 1 cut(s) 2741
AoxI GGCC 4 cut(s) 327, 1321, 2523, 2735
ApaLI GTGCAC 2 cut(s) 364, 2893
ApeKI GCWGC 6 cut(s) 374, 593, 766, 1661, 1892, 2240
ArsI GACNNNNNNTTYG 2 cut(s) 2993, 3025
AseI ATTAAT 1 cut(s) 1350
Asp700I GAANNNNTTC 3 cut(s) 155, 752, 2947
AspA2I CCTAGG 1 cut(s) 1417
AspS9I GGNCC 9 cut(s) 327, 581, 941, 1322, 1361, 1421, 1880, 2096, 2180
AsuC2I CCSGG 2 cut(s) 1672, 2988
AsuHPI GGTGA 7 cut(s) 85, 538, 809, 2771, 3022, 3058, 3141
AsuII TTCGAA 2 cut(s) 936, 2500
AvaII GGWCC 7 cut(s) 581, 941, 1361, 1421, 1880, 2096, 2180
AvrII CCTAGG 1 cut(s) 1417
BaeGI GKGCMC 2 cut(s) 368, 2897
BaeI ACNNNNGTAYC 2 cut(s) 2599, 2632
BanI GGYRCC 3 cut(s) 458, 1163, 1229
BanII GRGCYC 4 cut(s) 38, 1022, 1416, 1840
BarI GAAGNNNNNNTAC 2 cut(s) 930, 962
BbsI GAAGAC 4 cut(s) 5, 1265, 1368, 2690
Bbv12I GWGCWC 3 cut(s) 368, 1022, 2897
BbvCI CCTCAGC 1 cut(s) 1070
BbvI GCAGC 6 cut(s) 361, 605, 778, 1648, 1904, 2252
BccI CCATC 9 cut(s) 187, 286, 742, 1379, 1449, 1833, 1904, 2201, 2929
BceAI ACGGC 1 cut(s) 1809
BcgI CGANNNNNNTGC 2 cut(s) 62, 96
BciT130I CCWGG 3 cut(s) 98, 1326, 1712
BciVI GTATCC 2 cut(s) 867, 1868
BclI TGATCA 2 cut(s) 90, 2389
BcnI CCSGG 2 cut(s) 1672, 2988
BcoDI GTCTC 5 cut(s) 351, 1134, 1681, 2404, 2555
BcuI ACTAGT 3 cut(s) 1946, 2546, 2824
BfmI CTRYAG 4 cut(s) 591, 2188, 2238, 3024
BfuAI ACCTGC 2 cut(s) 43, 1891
BfuI GTATCC 2 cut(s) 867, 1868
BglI GCCNNNNNGGC 1 cut(s) 42
BisI GCNGC 6 cut(s) 375, 594, 767, 1662, 1893, 2241
BlnI CCTAGG 1 cut(s) 1417
BlpI GCTNAGC 1 cut(s) 2583
BlsI GCNGC 6 cut(s) 376, 595, 768, 1663, 1894, 2242
BmcAI AGTACT 1 cut(s) 2001
Bme1390I CCNGG 5 cut(s) 98, 1326, 1672, 1712, 2988
Bme18I GGWCC 7 cut(s) 581, 941, 1361, 1421, 1880, 2096, 2180
BmgT120I GGNCC 9 cut(s) 327, 581, 941, 1322, 1361, 1421, 1880, 2096, 2180
BmiI GGNNCC 6 cut(s) 460, 582, 583, 1165, 1231, 2354
BmrFI CCNGG 5 cut(s) 98, 1326, 1672, 1712, 2988
BmrI ACTGGG 2 cut(s) 104, 1974
BmsI GCATC 4 cut(s) 213, 645, 1262, 2252
BmuI ACTGGG 2 cut(s) 104, 1974
BoxI GACNNNNGTC 3 cut(s) 387, 2547, 2690
BpiI GAAGAC 4 cut(s) 5, 1265, 1368, 2690
BplI GAGNNNNNCTC 2 cut(s) 1009, 1041
BpmI CTGGAG 2 cut(s) 390, 2393
Bpu10I CCTNAGC 2 cut(s) 1070, 1863
Bpu1102I GCTNAGC 1 cut(s) 2583
Bpu14I TTCGAA 2 cut(s) 936, 2500
BpuEI CTTGAG 7 cut(s) 50, 210, 237, 267, 934, 1619, 1628
BpuMI CCSGG 2 cut(s) 1672, 2988
Bsa29I ATCGAT 1 cut(s) 3213
BsaBI GATNNNNATC 1 cut(s) 3219
BsaHI GRCGYC 1 cut(s) 1690
BsaI GGTCTC 1 cut(s) 351
BsaJI CCNNGG 5 cut(s) 96, 1324, 1417, 1711, 2251
BsaWI WCCGGW 3 cut(s) 353, 1909, 2650
Bsc4I CCNNNNNNNGG 7 cut(s) 368, 1386, 1867, 1868, 2626, 2756, 2938
Bse1I ACTGG 9 cut(s) 110, 373, 616, 1447, 1969, 2263, 2526, 3008, 3051
Bse3DI GCAATG 3 cut(s) 347, 597, 1474
Bse8I GATNNNNATC 1 cut(s) 3219
BseBI CCWGG 3 cut(s) 98, 1326, 1712
BseCI ATCGAT 1 cut(s) 3213
BseDI CCNNGG 5 cut(s) 96, 1324, 1417, 1711, 2251
BseGI GGATG 3 cut(s) 2243, 2553, 2921
BseJI GATNNNNATC 1 cut(s) 3219
BseLI CCNNNNNNNGG 7 cut(s) 368, 1386, 1867, 1868, 2626, 2756, 2938
BseMI GCAATG 3 cut(s) 347, 597, 1474
BseNI ACTGG 9 cut(s) 110, 373, 616, 1447, 1969, 2263, 2526, 3008, 3051
BseRI GAGGAG 1 cut(s) 234
BseSI GKGCMC 2 cut(s) 368, 2897
BseXI GCAGC 6 cut(s) 361, 605, 778, 1648, 1904, 2252
BsgI GTGCAG 2 cut(s) 71, 2317
BshFI GGCC 4 cut(s) 329, 1323, 2525, 2737
BshNI GGYRCC 3 cut(s) 458, 1163, 1229
BshVI ATCGAT 1 cut(s) 3213
BsiHKAI GWGCWC 3 cut(s) 368, 1022, 2897
BsiSI CCGG 6 cut(s) 354, 456, 1671, 1910, 2651, 2988
BslFI GGGAC 5 cut(s) 108, 594, 1861, 2914, 3187
BslI CCNNNNNNNGG 7 cut(s) 368, 1386, 1867, 1868, 2626, 2756, 2938
BsmAI GTCTC 5 cut(s) 351, 1134, 1681, 2404, 2555
BsmBI CGTCTC 2 cut(s) 1681, 2404
BsmFI GGGAC 5 cut(s) 108, 594, 1861, 2914, 3187
BsmI GAATGC 4 cut(s) 155, 1012, 1716, 2949
BsnI GGCC 4 cut(s) 329, 1323, 2525, 2737
Bso31I GGTCTC 1 cut(s) 351
Bsp119I TTCGAA 2 cut(s) 936, 2500
Bsp1286I GDGCHC 6 cut(s) 38, 368, 1022, 1416, 1840, 2897
Bsp1407I TGTACA 1 cut(s) 2506
Bsp143I GATC 6 cut(s) 60, 90, 692, 2389, 2746, 3210
Bsp1720I GCTNAGC 1 cut(s) 2583
BspACI CCGC 3 cut(s) 1867, 2172, 2627
BspANI GGCC 4 cut(s) 329, 1323, 2525, 2737
BspDI ATCGAT 1 cut(s) 3213
BspHI TCATGA 1 cut(s) 2482
BspLI GGNNCC 6 cut(s) 460, 582, 583, 1165, 1231, 2354
BspMAI CTGCAG 2 cut(s) 595, 2242
BspMI ACCTGC 2 cut(s) 43, 1891
BspPI GGATC 1 cut(s) 2741
BspQI GCTCTTC 2 cut(s) 1027, 2067
BspT104I TTCGAA 2 cut(s) 936, 2500
BspT107I GGYRCC 3 cut(s) 458, 1163, 1229
BspTNI GGTCTC 1 cut(s) 351
BsrBI CCGCTC 1 cut(s) 1867
BsrDI GCAATG 3 cut(s) 347, 597, 1474
BsrGI TGTACA 1 cut(s) 2506
BsrI ACTGG 9 cut(s) 110, 373, 616, 1447, 1969, 2263, 2526, 3008, 3051
BssECI CCNNGG 5 cut(s) 96, 1324, 1417, 1711, 2251
BssMI GATC 6 cut(s) 60, 90, 692, 2389, 2746, 3210
BssNAI GTATAC 1 cut(s) 1506
BssNI GRCGYC 1 cut(s) 1690
BssT1I CCWWGG 2 cut(s) 1417, 2251
Bst1107I GTATAC 1 cut(s) 1506
Bst2UI CCWGG 3 cut(s) 98, 1326, 1712
Bst4CI ACNGT 8 cut(s) 120, 864, 1490, 1627, 2384, 2974, 3028, 3053
Bst6I CTCTTC 5 cut(s) 1027, 1197, 1263, 2067, 2206
BstACI GRCGYC 1 cut(s) 1690
BstAPI GCANNNNNTGC 2 cut(s) 465, 599
BstAUI TGTACA 1 cut(s) 2506
BstBI TTCGAA 2 cut(s) 936, 2500
BstC8I GCNNGC 3 cut(s) 617, 1291, 1756
BstF5I GGATG 3 cut(s) 2243, 2553, 2921
BstKTI GATC 6 cut(s) 63, 93, 695, 2392, 2749, 3213
BstMAI GTCTC 5 cut(s) 351, 1134, 1681, 2404, 2555
BstMBI GATC 6 cut(s) 60, 90, 692, 2389, 2746, 3210
BstMWI GCNNNNNNNGC 8 cut(s) 42, 263, 465, 599, 739, 1320, 1892, 1901
BstNI CCWGG 3 cut(s) 98, 1326, 1712
BstNSI RCATGY 2 cut(s) 1652, 1762
BstPAI GACNNNNGTC 3 cut(s) 387, 2547, 2690
BstSCI CCNGG 5 cut(s) 96, 1324, 1670, 1710, 2986
BstSFI CTRYAG 4 cut(s) 591, 2188, 2238, 3024
BstSLI GKGCMC 2 cut(s) 368, 2897
BstV1I GCAGC 6 cut(s) 361, 605, 778, 1648, 1904, 2252
BstV2I GAAGAC 4 cut(s) 5, 1265, 1368, 2690
BstZ17I GTATAC 1 cut(s) 1506
Bsu15I ATCGAT 1 cut(s) 3213
BsuI GTATCC 2 cut(s) 867, 1868
BsuRI GGCC 4 cut(s) 329, 1323, 2525, 2737
BsuTUI ATCGAT 1 cut(s) 3213
BtgZI GCGATG 1 cut(s) 2889
BtsCI GGATG 3 cut(s) 2243, 2553, 2921
BtsIMutI CAGTG 8 cut(s) 116, 270, 309, 366, 1482, 1906, 2334, 2734
BveI ACCTGC 2 cut(s) 43, 1891
Cac8I GCNNGC 3 cut(s) 617, 1291, 1756
CciI TCATGA 1 cut(s) 2482
Cfr13I GGNCC 9 cut(s) 327, 581, 941, 1322, 1361, 1421, 1880, 2096, 2180
ClaI ATCGAT 1 cut(s) 3213
CspCI CAANNNNNGTGG 2 cut(s) 385, 420
DpnI GATC 6 cut(s) 62, 92, 694, 2391, 2748, 3212
DpnII GATC 6 cut(s) 60, 90, 692, 2389, 2746, 3210
DraI TTTAAA 1 cut(s) 2418
DraIII CACNNNGTG 1 cut(s) 2204
Eam1104I CTCTTC 5 cut(s) 1027, 1197, 1263, 2067, 2206
EarI CTCTTC 5 cut(s) 1027, 1197, 1263, 2067, 2206
EciI GGCGGA 1 cut(s) 2187
Ecl136II GAGCTC 1 cut(s) 1020
Eco130I CCWWGG 2 cut(s) 1417, 2251
Eco24I GRGCYC 4 cut(s) 38, 1022, 1416, 1840
Eco31I GGTCTC 1 cut(s) 351
Eco32I GATATC 1 cut(s) 1060
Eco47I GGWCC 7 cut(s) 581, 941, 1361, 1421, 1880, 2096, 2180
Eco53kI GAGCTC 1 cut(s) 1020
Eco57I CTGAAG 3 cut(s) 370, 1263, 2092
EcoICRI GAGCTC 1 cut(s) 1020
EcoO109I RGGNCCY 3 cut(s) 581, 941, 1361
EcoRI GAATTC 3 cut(s) 298, 538, 2846
EcoRII CCWGG 3 cut(s) 96, 1324, 1710
EcoRV GATATC 1 cut(s) 1060
EcoT14I CCWWGG 2 cut(s) 1417, 2251
EcoT38I GRGCYC 4 cut(s) 38, 1022, 1416, 1840
ErhI CCWWGG 2 cut(s) 1417, 2251
Esp3I CGTCTC 2 cut(s) 1681, 2404
FaqI GGGAC 5 cut(s) 108, 594, 1861, 2914, 3187
FauI CCCGC 2 cut(s) 1860, 2620
FbaI TGATCA 2 cut(s) 90, 2389
FblI GTMKAC 1 cut(s) 1505
Fnu4HI GCNGC 6 cut(s) 375, 594, 767, 1662, 1893, 2241
FokI GGATG 3 cut(s) 2230, 2540, 2908
FriOI GRGCYC 4 cut(s) 38, 1022, 1416, 1840
Fsp4HI GCNGC 6 cut(s) 375, 594, 767, 1662, 1893, 2241
GluI GCNGC 6 cut(s) 375, 594, 767, 1662, 1893, 2241
GsuI CTGGAG 2 cut(s) 390, 2393
HaeIII GGCC 4 cut(s) 329, 1323, 2525, 2737
HapII CCGG 6 cut(s) 354, 456, 1671, 1910, 2651, 2988
Hin1I GRCGYC 1 cut(s) 1690
HincII GTYRAC 2 cut(s) 141, 2433
HindII GTYRAC 2 cut(s) 141, 2433
HindIII AAGCTT 3 cut(s) 902, 2159, 2585
HpaII CCGG 6 cut(s) 354, 456, 1671, 1910, 2651, 2988
HphI GGTGA 7 cut(s) 85, 538, 809, 2771, 3022, 3058, 3141
HpyCH4III ACNGT 8 cut(s) 120, 864, 1490, 1627, 2384, 2974, 3028, 3053
HpyCH4IV ACGT 8 cut(s) 774, 855, 1373, 1690, 2413, 2437, 3072, 3200
HpyF10VI GCNNNNNNNGC 8 cut(s) 42, 263, 465, 599, 739, 1320, 1892, 1901
HpySE526I ACGT 8 cut(s) 774, 855, 1373, 1690, 2413, 2437, 3072, 3200
Hsp92I GRCGYC 1 cut(s) 1690
KflI GGGWCCC 1 cut(s) 581
Ksp22I TGATCA 2 cut(s) 90, 2389
Kzo9I GATC 6 cut(s) 60, 90, 692, 2389, 2746, 3210
LguI GCTCTTC 2 cut(s) 1027, 2067
LmnI GCTCC 6 cut(s) 241, 247, 371, 1017, 1772, 2358
Lsp1109I GCAGC 6 cut(s) 361, 605, 778, 1648, 1904, 2252
LweI GCATC 4 cut(s) 213, 645, 1262, 2252
MaeII ACGT 8 cut(s) 774, 855, 1373, 1690, 2413, 2437, 3072, 3200
MalI GATC 6 cut(s) 62, 92, 694, 2391, 2748, 3212
MbiI CCGCTC 1 cut(s) 1867
MboI GATC 6 cut(s) 60, 90, 692, 2389, 2746, 3210
MfeI CAATTG 3 cut(s) 2231, 2634, 2795
MhlI GDGCHC 6 cut(s) 38, 368, 1022, 1416, 1840, 2897
MlyI GAGTC 3 cut(s) 68, 2825, 3110
MmeI TCCRAC 3 cut(s) 1453, 1967, 2074
MroXI GAANNNNTTC 3 cut(s) 155, 752, 2947
MseI TTAA 7 cut(s) 978, 1350, 2346, 2417, 2442, 2471, 3020
MslI CAYNNNNRTG 2 cut(s) 2514, 3071
MspA1I CMGCKG 1 cut(s) 1135
MspI CCGG 6 cut(s) 354, 456, 1671, 1910, 2651, 2988
MspR9I CCNGG 5 cut(s) 98, 1326, 1672, 1712, 2988
MunI CAATTG 3 cut(s) 2231, 2634, 2795
Mva1269I GAATGC 4 cut(s) 155, 1012, 1716, 2949
MvaI CCWGG 3 cut(s) 98, 1326, 1712
MwoI GCNNNNNNNGC 8 cut(s) 42, 263, 465, 599, 739, 1320, 1892, 1901
NciI CCSGG 2 cut(s) 1672, 2988
NdeII GATC 6 cut(s) 60, 90, 692, 2389, 2746, 3210
NlaIV GGNNCC 6 cut(s) 460, 582, 583, 1165, 1231, 2354
NmuCI GTSAC 8 cut(s) 3, 389, 437, 1438, 2965, 3028, 3064, 3073
NspI RCATGY 2 cut(s) 1652, 1762
NspV TTCGAA 2 cut(s) 936, 2500
OliI CACNNNNGTG 1 cut(s) 3071
PagI TCATGA 1 cut(s) 2482
PciI ACATGT 1 cut(s) 1648
PciSI GCTCTTC 2 cut(s) 1027, 2067
PcsI WCGNNNNNNNCGW 2 cut(s) 69, 3197
PctI GAATGC 4 cut(s) 155, 1012, 1716, 2949
PdmI GAANNNNTTC 3 cut(s) 155, 752, 2947
PfeI GAWTC 7 cut(s) 802, 1091, 1329, 1544, 2328, 2489, 3188
PkrI GCNGC 6 cut(s) 376, 595, 768, 1663, 1894, 2242
PleI GAGTC 3 cut(s) 68, 2825, 3110
PpsI GAGTC 3 cut(s) 68, 2825, 3110
PpuMI RGGWCCY 3 cut(s) 581, 941, 1361
PscI ACATGT 1 cut(s) 1648
PshAI GACNNNNGTC 3 cut(s) 387, 2547, 2690
PshBI ATTAAT 1 cut(s) 1350
PsiI TTATAA 1 cut(s) 1338
Psp124BI GAGCTC 1 cut(s) 1022
Psp1406I AACGTT 1 cut(s) 855
Psp5II RGGWCCY 3 cut(s) 581, 941, 1361
Psp6I CCWGG 3 cut(s) 96, 1324, 1710
PspGI CCWGG 3 cut(s) 96, 1324, 1710
PspN4I GGNNCC 6 cut(s) 460, 582, 583, 1165, 1231, 2354
PspPI GGNCC 9 cut(s) 327, 581, 941, 1322, 1361, 1421, 1880, 2096, 2180
PspPPI RGGWCCY 3 cut(s) 581, 941, 1361
PsrI GAACNNNNNNTAC 2 cut(s) 1992, 2024
PstI CTGCAG 2 cut(s) 595, 2242
PvuII CAGCTG 1 cut(s) 1135
RseI CAYNNNNRTG 2 cut(s) 2514, 3071
SacI GAGCTC 1 cut(s) 1022
SapI GCTCTTC 2 cut(s) 1027, 2067
SaqAI TTAA 7 cut(s) 978, 1350, 2346, 2417, 2442, 2471, 3020
SatI GCNGC 6 cut(s) 375, 594, 767, 1662, 1893, 2241
Sau3AI GATC 6 cut(s) 60, 90, 692, 2389, 2746, 3210
Sau96I GGNCC 9 cut(s) 327, 581, 941, 1322, 1361, 1421, 1880, 2096, 2180
ScaI AGTACT 1 cut(s) 2001
SchI GAGTC 3 cut(s) 68, 2825, 3110
ScrFI CCNGG 5 cut(s) 98, 1326, 1672, 1712, 2988
SduI GDGCHC 6 cut(s) 38, 368, 1022, 1416, 1840, 2897
SfaNI GCATC 4 cut(s) 213, 645, 1262, 2252
SfcI CTRYAG 4 cut(s) 591, 2188, 2238, 3024
SfuI TTCGAA 2 cut(s) 936, 2500
SinI GGWCC 7 cut(s) 581, 941, 1361, 1421, 1880, 2096, 2180
SmiMI CAYNNNNRTG 2 cut(s) 2514, 3071
SmlI CTYRAG 7 cut(s) 29, 225, 252, 282, 913, 1607, 1634
SmoI CTYRAG 7 cut(s) 29, 225, 252, 282, 913, 1607, 1634
SpeI ACTAGT 3 cut(s) 1946, 2546, 2824
SsiI CCGC 3 cut(s) 1867, 2172, 2627
SspI AATATT 4 cut(s) 322, 1084, 1267, 2533
SstI GAGCTC 1 cut(s) 1022
StyD4I CCNGG 5 cut(s) 96, 1324, 1670, 1710, 2986
StyI CCWWGG 2 cut(s) 1417, 2251
TaaI ACNGT 8 cut(s) 120, 864, 1490, 1627, 2384, 2974, 3028, 3053
TaiI ACGT 8 cut(s) 777, 858, 1376, 1693, 2416, 2440, 3075, 3203
TaqI TCGA 8 cut(s) 72, 936, 1004, 1840, 2500, 2781, 3191, 3213
TatI WGTACW 3 cut(s) 1999, 2506, 3128
TfiI GAWTC 7 cut(s) 802, 1091, 1329, 1544, 2328, 2489, 3188
Tru1I TTAA 7 cut(s) 978, 1350, 2346, 2417, 2442, 2471, 3020
Tru9I TTAA 7 cut(s) 978, 1350, 2346, 2417, 2442, 2471, 3020
TscAI CASTG 8 cut(s) 123, 277, 309, 373, 1489, 1906, 2341, 2734
TseFI GTSAC 8 cut(s) 3, 389, 437, 1438, 2965, 3028, 3064, 3073
TseI GCWGC 6 cut(s) 374, 593, 766, 1661, 1892, 2240
Tsp45I GTSAC 8 cut(s) 3, 389, 437, 1438, 2965, 3028, 3064, 3073
TspGWI ACGGA 1 cut(s) 2340
TspRI CASTG 8 cut(s) 123, 277, 309, 373, 1489, 1906, 2341, 2734
VneI GTGCAC 2 cut(s) 364, 2893
VpaK11BI GGWCC 7 cut(s) 581, 941, 1361, 1421, 1880, 2096, 2180
VspI ATTAAT 1 cut(s) 1350
XbaI TCTAGA 2 cut(s) 1054, 2834
XceI RCATGY 2 cut(s) 1652, 1762
XcmI CCANNNNNNNNNTGG 2 cut(s) 525, 556
XmaJI CCTAGG 1 cut(s) 1417
XmiI GTMKAC 1 cut(s) 1505
XmnI GAANNNNTTC 3 cut(s) 155, 752, 2947
ZraI GACGTC 1 cut(s) 1691
ZrmI AGTACT 1 cut(s) 2001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.