RchiOBHm_Chr5g0018891

Di-glucose binding within endoplasmic reticulum

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000088
Physical Location & Seq
Forward (+)
13375004 .. 13383349
8346 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29905

Sequence Viewer

Length: 3126 bp
ATGAAGCAAGTAGCTAGCTTCTCTTTCGGTAGAACATGTGATGACTACTTCTTCTTCTGTCTTATCTTCTTCCTGGGTTGCTTCTGGTTCCATGCTTCCACTGCCCAAAATGCTACTACGGACCCAACCGAAGTGGCGGCGTTGAACTCTATATTACTACAATGGGACGCGCCAGCGGTGCCTCTGTGGAACATCAGTGGAGAGCCATGCAGTGGATCGGCCATCAATGGCACCGCCTTCGAAGACGGCCTCAATAACCCAGCCATCACTTGCGACTGTAGTTTTGAAAGTAACACCACCTGCCATATCACTCAATTGAGAGTTTATGCTTTGGACAAAACAGGAGTGTTACCTGAAGAACTTGTGGCTTTGAAATATCTTACTCTTTTCAAAATCGATCAGAACTTTTTCACCGGTCCCCTCCCAGCATGGATTGGCAATATGTCTGAGTTGAAGGAGTTGTCGATTGCCCACAATGACTTCTTTGGACCCATCCCCAAGGAGCTTGGAAACCTTCAGAAACTAAATCTGCTGTCCTTTGGAATAAATAATTTCTCTGGAACACTGCCTCCAGAACTTGGTAATTTAGCCAATCTCGAAGAGCTTTACATAAACAGCTGTGGACTTGGTGGTGAAATTCCTACAACATTTGCTAAACTTAAAAAAATGCGAATCCTAGGGGCATCAGACAGTCCTTTCTCAGGAAAGATACCAGATTTCATAGGGAATTGGACAAAGTTAACCTCCTTGAGATTTGAAGGGAATTCTTTTGAAGGCCCAATACCAAGCAGTTTTTCTCAGTTGACCACAATGAATTCTCTACGAATCAGTGATATCTATAATGTGAGCTCCTCTCTTGACTTCATAAAGAATTTGAAGAAATTGACTGATTTAGCTCTTCGAAATGCCTTAGTCACTGGCCGCATCCCTTCTGATATTAGAGAATATCAAAGTTTAAATATACTGGATTTGGGTTTCAACAATATAACAGGTCAACTCCCAAGTGACTTGTTCAACATGAGTTCTCTCACATCCTTATTTCTTGGAAATAATAGTTTGTCTGGAGTTCTGCCTAGCCAAAAGAGTGATCGTCTTCAAACCATAGATTTATCTTATAACTATTTATCAGGAAGTCTTCCCCCATGGGTAACCACAATATCGCAACTGAACTTGGTGGTCAACAACTTCACTTTTAACGAAAGTTCAATGTTTCCCGGATTGAATTGCCTTCAAAGAAATTTTCCTTGCAATAGATATCCCCCGCGCTATGCAAACTTCTCAATCAACTGTGGAGGACCAGACATGAGAGGAAGTGATGGCATATTATATGAGGCAGAAAACTCAACTCTTGGCCCAGCAACATATAATGTAACCAGTACAGAGAAATGGGCTGTTAGCAATGTGGGTTTGTTTGCTGAGAGGAAGAATCCAAGCTATTTGCTAACCTCCTTGGCACAGGTTACTGGGTCGGATGTGACCCCAGAGCTTTTCCAGACTGCAAGATTATCTGCAGGATCACTGAGATACTACGGCTTGGGTCTCCAGAATGGGCCTTATACAGTAAAATTACAATTTGCAGAAATGGTTTTTGATGATCGTGCATCACAAACTTGGAAAAGTTTAGGAAGGCGAGTATTTGATATCTATATTCAGGGGCATCTAGTAGTGAAGGACTTTGACATATCCAAGGAGGCAGGTGGTGTTTTAAGAGTAGCAGCGAAAAACTTCAATGTAAATGTGTCGGACAATTATGTTGAAATTCATTTGTTCTGGGCTGGTAAGGGGACCTGCTGCATACCTAATCAAGGTGATTATGGTCCACTAATATCAACTGTCAATGCTGTTCCAGATTTTAAACCAACTGTTTCTGGGATTCCACCAACCACTCCAGGAAAGAAGAGCATGACAGGGGTGATTGTTGGCGTTGCAGTCTCTGTCGGAGTTGTGAGCTTGCTATTAATATTTGCAGTTTTATATTTGAGGAGAAAAATACCAGACAAAGATGACGATGAAGAACTTCAAGGATTAGACCCGCGACCAAATACATTCAGTTATAGTGAGTTAAAAGCTGCAACAGGAGATTTTAATCTTTCAAATAAACTAGGGGAGGGAGGATATGGCGCCGTTTACAAGGGCATACTTTCTGAAGCAAGGTTAGTGGCTGTGAAGCAACTTTCAGTAGCATCTCACCAAGGGAAGAGTCAATTTGCAGCAGAAATTGCTGCCATATCTGCAGTGCAACATCGCAATCTAGTGAAACTGTTTGGATGCTGTGTCGAAGGAAACCAGCGAATTTTGGTTTATGAATATCTTGAAAACAAGAGCCTTGATCAGGCACTTTTTGGAAACAACATGCATCTTGACTGGCATACCAGATTCAATATCTTGTTGGGAACAGCAAGAGGACTTGCCTATCTTCATGAGGAGTCGAGGCCAAGGATAGTACATAGAGATGTCAAAGCCAGTAATATTTTGCTTGATGCAGACCTCTCCCCAAAAATATCAGATTTTGGACTGGCAAAGCTTTATGATGATGAGAAAACCCACATCAGCACCCGAGTTGCAGGGACAATAGGCTATTTGGCACCGGAGTATGCAATGCGAGGACATCTGACTGAAAAGGCTGATGTATTCGGTTTTGGAGTTGTCATTTTGGAGACGCTTAGTGGGAGACCAAACACTGACAATGACTTGGATGCCGGAGAGATTTATCTCCTTGATTGGGCATGGACTCTACATGAAAAAAATGAGCGTTTGGGGCTTGTGGATCTGAGACTGACCGACTTTGATGAAGAAGAAGCAAATAGATTGATAAGATTAGCTTTCCTGTGTACTCAGGCATCCCCATTGATGCGGCCATCTATGTCTCGTGTGGTGGCCATGCTTGCTGGAGATATTGAAGTAGGTAATGTTATGGCAAAGCCAAGTTATTTGACAGACTGGGATTTCAAAGATGTAACAGGGAGCTTCTTGATTGATGGTGATACCCCCTCAACTGGGATGACTCACTCCAACAATCAGTCTACTGGCATCACAACCGGTGCTAACAGCAGAATTGACCTGATGCAGTCTCCTGTGAATCCTAATCATTCATTGCTCACTGGGACTATAGGAGAAGGAAGGTGA

Protein Analysis

1041

Amino Acids

114.28

Weight (kDa)

5.36

Isoelectric Point (pI)

31.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 96 - 205 2.8e-08 Leucine-rich repeat region
LRR_14 PF23598 187 - 276 4.1e-06 Leucine-rich repeat region
Malectin PF11721 426 - 610 1.1e-41 Malectin domain
PK_Tyr_Ser-Thr PF07714 696 - 961 2.6e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 696 - 899 2.7e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1116
AarI CACCTGC 2 cut(s) 308, 1685
Acc36I ACCTGC 3 cut(s) 308, 1685, 1796
AccB1I GGYRCC 4 cut(s) 178, 230, 2120, 2584
AccB7I CCANNNNNTGG 2 cut(s) 212, 578
AccI GTMKAC 1 cut(s) 3023
AccII CGCG 3 cut(s) 170, 1264, 2035
AciI CCGC 7 cut(s) 137, 176, 234, 922, 1262, 2033, 2854
AclWI GGATC 3 cut(s) 223, 1522, 2775
AcoI YGGCCR 4 cut(s) 219, 919, 2855, 2877
AcsI RAATTY 7 cut(s) 636, 763, 814, 871, 1237, 1758, 2292
AcuI CTGAAG 3 cut(s) 375, 500, 2166
AcyI GRCGYC 1 cut(s) 2121
AfaI GTAC 3 cut(s) 1378, 2445, 2833
AfiI CCNNNNNNNGG 8 cut(s) 212, 578, 701, 1805, 2332, 2722, 2996, 2997
AflIII ACRYGT 1 cut(s) 35
AgeI ACCGGT 2 cut(s) 413, 3038
AjnI CCWGG 2 cut(s) 72, 1888
AjuI GAANNNNNNNTTGG 2 cut(s) 778, 810
AloI GAACNNNNNNTCC 2 cut(s) 553, 585
Alw21I GWGCWC 1 cut(s) 851
Alw26I GTCTC 7 cut(s) 1544, 1936, 2651, 2665, 2767, 2871, 3075
AlwI GGATC 3 cut(s) 223, 1522, 2775
AlwNI CAGNNNCTG 1 cut(s) 1934
Ama87I CYCGRG 1 cut(s) 2556
AoxI GGCC 9 cut(s) 219, 247, 775, 919, 1351, 1550, 2432, 2855, 2877
ApeKI GCWGC 5 cut(s) 1715, 1791, 2069, 2210, 2222
ApoI RAATTY 7 cut(s) 636, 763, 814, 871, 1237, 1758, 2292
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AseI ATTAAT 1 cut(s) 1958
AsiGI ACCGGT 2 cut(s) 413, 3038
Asp700I GAANNNNTTC 3 cut(s) 407, 1724, 2016
AspA2I CCTAGG 1 cut(s) 676
AspLEI GCGC 3 cut(s) 172, 1266, 2123
AspS9I GGNCC 9 cut(s) 121, 416, 488, 776, 1295, 1352, 1550, 1785, 1817
AsuC2I CCSGG 1 cut(s) 1215
AsuHPI GGTGA 6 cut(s) 403, 644, 1820, 1924, 2180, 2993
AsuII TTCGAA 2 cut(s) 240, 901
AsuNHI GCTAGC 1 cut(s) 14
AvaI CYCGRG 1 cut(s) 2556
AvaII GGWCC 6 cut(s) 121, 416, 488, 1295, 1785, 1817
AvrII CCTAGG 1 cut(s) 676
BalI TGGCCA 1 cut(s) 2879
BanI GGYRCC 4 cut(s) 178, 230, 2120, 2584
BanII GRGCYC 1 cut(s) 851
BarI GAAGNNNNNNTAC 2 cut(s) 765, 797
BauI CACGAG 1 cut(s) 2868
BbsI GAAGAC 3 cut(s) 249, 1085, 1127
Bbv12I GWGCWC 1 cut(s) 851
BbvI GCAGC 5 cut(s) 1727, 1778, 2056, 2209, 2222
BccI CCATC 6 cut(s) 230, 272, 500, 1310, 2866, 2972
BceAI ACGGC 3 cut(s) 262, 1546, 2108
BcgI CGANNNNNNTGC 2 cut(s) 220, 254
BciT130I CCWGG 2 cut(s) 74, 1890
BclI TGATCA 1 cut(s) 2329
BcnI CCSGG 1 cut(s) 1215
BcoDI GTCTC 7 cut(s) 1544, 1936, 2651, 2665, 2767, 2871, 3075
BfaI CTAG 6 cut(s) 15, 677, 1074, 1661, 2102, 2252
BfmI CTRYAG 4 cut(s) 277, 1509, 2232, 3108
BfoI RGCGCY 1 cut(s) 2124
BfuAI ACCTGC 3 cut(s) 308, 1685, 1796
BisI GCNGC 8 cut(s) 138, 922, 1716, 1792, 2070, 2211, 2223, 2855
BlnI CCTAGG 1 cut(s) 676
BlsI GCNGC 8 cut(s) 139, 923, 1717, 1793, 2071, 2212, 2224, 2856
Bme1390I CCNGG 3 cut(s) 74, 1215, 1890
Bme18I GGWCC 6 cut(s) 121, 416, 488, 1295, 1785, 1817
BmeT110I CYCGRG 1 cut(s) 2556
BmgT120I GGNCC 9 cut(s) 121, 416, 488, 776, 1295, 1352, 1550, 1785, 1817
BmiI GGNNCC 9 cut(s) 89, 123, 180, 232, 418, 490, 1786, 2122, 2586
BmrFI CCNGG 3 cut(s) 74, 1215, 1890
BmrI ACTGGG 4 cut(s) 1473, 2950, 3006, 3111
BmtI GCTAGC 1 cut(s) 18
BmuI ACTGGG 4 cut(s) 1473, 2950, 3006, 3111
BpiI GAAGAC 3 cut(s) 249, 1085, 1127
BplI GAGNNNNNCTC 2 cut(s) 838, 870
BpmI CTGGAG 5 cut(s) 555, 1083, 1526, 1872, 2910
Bpu14I TTCGAA 2 cut(s) 240, 901
BpuEI CTTGAG 1 cut(s) 769
BpuMI CCSGG 1 cut(s) 1215
Bsa29I ATCGAT 1 cut(s) 396
BsaBI GATNNNNATC 1 cut(s) 2085
BsaHI GRCGYC 1 cut(s) 2121
BsaI GGTCTC 2 cut(s) 1544, 2665
BsaJI CCNNGG 8 cut(s) 73, 498, 676, 1142, 1449, 1686, 2191, 2435
BsaWI WCCGGW 3 cut(s) 413, 2587, 3038
BsaXI ACNNNNNCTCC 2 cut(s) 553, 583
Bsc4I CCNNNNNNNGG 8 cut(s) 212, 578, 701, 1805, 2332, 2722, 2996, 2997
Bse118I RCCGGY 2 cut(s) 413, 3038
Bse3DI GCAATG 3 cut(s) 1405, 2604, 3092
Bse8I GATNNNNATC 1 cut(s) 2085
BseBI CCWGG 2 cut(s) 74, 1890
BseCI ATCGAT 1 cut(s) 396
BseDI CCNNGG 8 cut(s) 73, 498, 676, 1142, 1449, 1686, 2191, 2435
BseGI GGATG 8 cut(s) 492, 924, 1031, 1477, 2273, 2701, 2840, 3006
BseJI GATNNNNATC 1 cut(s) 2085
BseLI CCNNNNNNNGG 8 cut(s) 212, 578, 701, 1805, 2332, 2722, 2996, 2997
BseMI GCAATG 3 cut(s) 1405, 2604, 3092
BseMII CTCAG 7 cut(s) 438, 714, 812, 1407, 1511, 2762, 2849
BseRI GAGGAG 3 cut(s) 841, 1996, 2438
BseXI GCAGC 5 cut(s) 1727, 1778, 2056, 2209, 2222
BseYI CCCAGC 3 cut(s) 259, 424, 1354
Bsh1236I CGCG 3 cut(s) 170, 1264, 2035
BshFI GGCC 9 cut(s) 221, 249, 777, 921, 1353, 1552, 2434, 2857, 2879
BshNI GGYRCC 4 cut(s) 178, 230, 2120, 2584
BshTI ACCGGT 2 cut(s) 413, 3038
BshVI ATCGAT 1 cut(s) 396
BsiHKAI GWGCWC 1 cut(s) 851
BsiHKCI CYCGRG 1 cut(s) 2556
BsiSI CCGG 5 cut(s) 414, 1215, 2588, 2700, 3039
BslFI GGGAC 5 cut(s) 179, 402, 1798, 2581, 3118
BslI CCNNNNNNNGG 8 cut(s) 212, 578, 701, 1805, 2332, 2722, 2996, 2997
BsmAI GTCTC 7 cut(s) 1544, 1936, 2651, 2665, 2767, 2871, 3075
BsmBI CGTCTC 1 cut(s) 2651
BsmFI GGGAC 5 cut(s) 179, 402, 1798, 2581, 3118
BsnI GGCC 9 cut(s) 221, 249, 777, 921, 1353, 1552, 2434, 2857, 2879
Bso31I GGTCTC 2 cut(s) 1544, 2665
BsoBI CYCGRG 1 cut(s) 2556
Bsp119I TTCGAA 2 cut(s) 240, 901
Bsp1286I GDGCHC 1 cut(s) 851
Bsp143I GATC 7 cut(s) 215, 397, 1087, 1514, 1594, 2329, 2767
Bsp19I CCATGG 1 cut(s) 1142
BspACI CCGC 7 cut(s) 137, 176, 234, 922, 1262, 2033, 2854
BspANI GGCC 9 cut(s) 221, 249, 777, 921, 1353, 1552, 2434, 2857, 2879
BspCNI CTCAG 7 cut(s) 439, 713, 811, 1408, 1512, 2763, 2848
BspDI ATCGAT 1 cut(s) 396
BspFNI CGCG 3 cut(s) 170, 1264, 2035
BspHI TCATGA 1 cut(s) 2419
BspLI GGNNCC 9 cut(s) 89, 123, 180, 232, 418, 490, 1786, 2122, 2586
BspMAI CTGCAG 2 cut(s) 1513, 2236
BspMI ACCTGC 3 cut(s) 308, 1685, 1796
BspOI GCTAGC 1 cut(s) 18
BspPI GGATC 3 cut(s) 223, 1522, 2775
BspQI GCTCTTC 3 cut(s) 594, 903, 1892
BspT104I TTCGAA 2 cut(s) 240, 901
BspT107I GGYRCC 4 cut(s) 178, 230, 2120, 2584
BspTNI GGTCTC 2 cut(s) 1544, 2665
BsrDI GCAATG 3 cut(s) 1405, 2604, 3092
BsrFI RCCGGY 2 cut(s) 413, 3038
BssAI RCCGGY 2 cut(s) 413, 3038
BssECI CCNNGG 8 cut(s) 73, 498, 676, 1142, 1449, 1686, 2191, 2435
BssMI GATC 7 cut(s) 215, 397, 1087, 1514, 1594, 2329, 2767
BssNI GRCGYC 1 cut(s) 2121
BssSI CACGAG 1 cut(s) 2868
BssT1I CCWWGG 7 cut(s) 498, 676, 1142, 1449, 1686, 2191, 2435
Bst2BI CACGAG 1 cut(s) 2868
Bst2UI CCWGG 2 cut(s) 74, 1890
Bst4CI ACNGT 7 cut(s) 278, 692, 1289, 1561, 1834, 1864, 2262
Bst6I CTCTTC 4 cut(s) 594, 903, 1892, 2192
BstACI GRCGYC 1 cut(s) 2121
BstAPI GCANNNNNTGC 1 cut(s) 2219
BstBI TTCGAA 2 cut(s) 240, 901
BstC8I GCNNGC 4 cut(s) 16, 174, 1952, 2886
BstDEI CTNAG 9 cut(s) 447, 700, 798, 910, 1416, 1520, 2663, 2771, 2835
BstDSI CCRYGG 1 cut(s) 1142
BstEII GGTNACC 1 cut(s) 1147
BstENI CCTNNNNNAGG 3 cut(s) 699, 1803, 2330
BstF5I GGATG 8 cut(s) 492, 924, 1031, 1477, 2273, 2701, 2840, 3006
BstFNI CGCG 3 cut(s) 170, 1264, 2035
BstH2I RGCGCY 1 cut(s) 2124
BstHHI GCGC 3 cut(s) 172, 1266, 2123
BstKTI GATC 7 cut(s) 218, 400, 1090, 1517, 1597, 2332, 2770
BstMAI GTCTC 7 cut(s) 1544, 1936, 2651, 2665, 2767, 2871, 3075
BstMBI GATC 7 cut(s) 215, 397, 1087, 1514, 1594, 2329, 2767
BstMWI GCNNNNNNNGC 7 cut(s) 101, 110, 178, 2219, 2231, 2758, 2885
BstNI CCWGG 2 cut(s) 74, 1890
BstNSI RCATGY 2 cut(s) 39, 2356
BstPI GGTNACC 1 cut(s) 1147
BstSCI CCNGG 3 cut(s) 72, 1213, 1888
BstSFI CTRYAG 4 cut(s) 277, 1509, 2232, 3108
BstUI CGCG 3 cut(s) 170, 1264, 2035
BstV1I GCAGC 5 cut(s) 1727, 1778, 2056, 2209, 2222
BstV2I GAAGAC 3 cut(s) 249, 1085, 1127
BstX2I RGATCY 1 cut(s) 2767
BstYI RGATCY 1 cut(s) 2767
Bsu15I ATCGAT 1 cut(s) 396
BsuRI GGCC 9 cut(s) 221, 249, 777, 921, 1353, 1552, 2434, 2857, 2879
BsuTUI ATCGAT 1 cut(s) 396
BtgI CCRYGG 1 cut(s) 1142
BtgZI GCGATG 1 cut(s) 2228
BtsCI GGATG 8 cut(s) 492, 924, 1031, 1477, 2273, 2701, 2840, 3006
BtsI GCAGTG 4 cut(s) 99, 217, 563, 2241
BveI ACCTGC 3 cut(s) 308, 1685, 1796
Cac8I GCNNGC 4 cut(s) 16, 174, 1952, 2886
CaiI CAGNNNCTG 1 cut(s) 1934
CciI TCATGA 1 cut(s) 2419
CfoI GCGC 3 cut(s) 172, 1266, 2123
Cfr10I RCCGGY 2 cut(s) 413, 3038
Cfr13I GGNCC 9 cut(s) 121, 416, 488, 776, 1295, 1352, 1550, 1785, 1817
ClaI ATCGAT 1 cut(s) 396
CseI GACGC 2 cut(s) 176, 2668
Csp6I GTAC 3 cut(s) 1377, 2444, 2832
CspAI ACCGGT 2 cut(s) 413, 3038
CspCI CAANNNNNGTGG 4 cut(s) 114, 149, 2139, 2174
CviQI GTAC 3 cut(s) 1377, 2444, 2832
DdeI CTNAG 9 cut(s) 447, 700, 798, 910, 1416, 1520, 2663, 2771, 2835
DinI GGCGCC 1 cut(s) 2122
DpnI GATC 7 cut(s) 217, 399, 1089, 1516, 1596, 2331, 2769
DpnII GATC 7 cut(s) 215, 397, 1087, 1514, 1594, 2329, 2767
DraI TTTAAA 2 cut(s) 957, 1855
EaeI YGGCCR 4 cut(s) 219, 919, 2855, 2877
Eam1104I CTCTTC 4 cut(s) 594, 903, 1892, 2192
EarI CTCTTC 4 cut(s) 594, 903, 1892, 2192
Ecl136II GAGCTC 1 cut(s) 849
Eco130I CCWWGG 7 cut(s) 498, 676, 1142, 1449, 1686, 2191, 2435
Eco24I GRGCYC 1 cut(s) 851
Eco31I GGTCTC 2 cut(s) 1544, 2665
Eco32I GATATC 3 cut(s) 835, 1256, 1642
Eco47I GGWCC 6 cut(s) 121, 416, 488, 1295, 1785, 1817
Eco53kI GAGCTC 1 cut(s) 849
Eco57I CTGAAG 3 cut(s) 375, 500, 2166
Eco88I CYCGRG 1 cut(s) 2556
Eco91I GGTNACC 1 cut(s) 1147
EcoICRI GAGCTC 1 cut(s) 849
EcoNI CCTNNNNNAGG 3 cut(s) 699, 1803, 2330
EcoO109I RGGNCCY 1 cut(s) 1785
EcoO65I GGTNACC 1 cut(s) 1147
EcoRI GAATTC 2 cut(s) 763, 814
EcoRII CCWGG 2 cut(s) 72, 1888
EcoRV GATATC 3 cut(s) 835, 1256, 1642
EcoT14I CCWWGG 7 cut(s) 498, 676, 1142, 1449, 1686, 2191, 2435
EcoT22I ATGCAT 1 cut(s) 2358
EcoT38I GRGCYC 1 cut(s) 851
EgeI GGCGCC 1 cut(s) 2122
EheI GGCGCC 1 cut(s) 2122
ErhI CCWWGG 7 cut(s) 498, 676, 1142, 1449, 1686, 2191, 2435
Esp3I CGTCTC 1 cut(s) 2651
FalI AAGNNNNNCTT 2 cut(s) 2806, 2838
FaqI GGGAC 5 cut(s) 179, 402, 1798, 2581, 3118
FauI CCCGC 2 cut(s) 1269, 2040
FbaI TGATCA 1 cut(s) 2329
FblI GTMKAC 1 cut(s) 3023
Fnu4HI GCNGC 8 cut(s) 138, 922, 1716, 1792, 2070, 2211, 2223, 2855
FokI GGATG 8 cut(s) 479, 911, 1018, 1484, 2280, 2708, 2827, 3013
FriOI GRGCYC 1 cut(s) 851
Fsp4HI GCNGC 8 cut(s) 138, 922, 1716, 1792, 2070, 2211, 2223, 2855
FspBI CTAG 6 cut(s) 15, 677, 1074, 1661, 2102, 2252
GlaI GCGC 3 cut(s) 171, 1265, 2122
GluI GCNGC 8 cut(s) 138, 922, 1716, 1792, 2070, 2211, 2223, 2855
GsaI CCCAGC 3 cut(s) 263, 428, 1358
GsuI CTGGAG 5 cut(s) 555, 1083, 1526, 1872, 2910
HaeII RGCGCY 1 cut(s) 2124
HaeIII GGCC 9 cut(s) 221, 249, 777, 921, 1353, 1552, 2434, 2857, 2879
HapII CCGG 5 cut(s) 414, 1215, 2588, 2700, 3039
HgaI GACGC 2 cut(s) 176, 2668
HhaI GCGC 3 cut(s) 172, 1266, 2123
Hin1I GRCGYC 1 cut(s) 2121
Hin6I GCGC 3 cut(s) 170, 1264, 2121
HinP1I GCGC 3 cut(s) 170, 1264, 2121
HincII GTYRAC 4 cut(s) 741, 804, 995, 1180
HindII GTYRAC 4 cut(s) 741, 804, 995, 1180
HindIII AAGCTT 1 cut(s) 2522
HpaI GTTAAC 1 cut(s) 741
HpaII CCGG 5 cut(s) 414, 1215, 2588, 2700, 3039
HphI GGTGA 6 cut(s) 403, 644, 1820, 1924, 2180, 2993
Hpy166II GTNNAC 9 cut(s) 623, 741, 804, 995, 1180, 1820, 2128, 2832, 3024
Hpy8I GTNNAC 9 cut(s) 623, 741, 804, 995, 1180, 1820, 2128, 2832, 3024
HpyCH4III ACNGT 7 cut(s) 278, 692, 1289, 1561, 1834, 1864, 2262
HpyF10VI GCNNNNNNNGC 7 cut(s) 101, 110, 178, 2219, 2231, 2758, 2885
HpyF3I CTNAG 9 cut(s) 447, 700, 798, 910, 1416, 1520, 2663, 2771, 2835
Hsp92I GRCGYC 1 cut(s) 2121
HspAI GCGC 3 cut(s) 170, 1264, 2121
KasI GGCGCC 1 cut(s) 2120
Ksp22I TGATCA 1 cut(s) 2329
KspAI GTTAAC 1 cut(s) 741
Kzo9I GATC 7 cut(s) 215, 397, 1087, 1514, 1594, 2329, 2767
LguI GCTCTTC 3 cut(s) 594, 903, 1892
LmnI GCTCC 3 cut(s) 502, 854, 2964
Lsp1109I GCAGC 5 cut(s) 1727, 1778, 2056, 2209, 2222
MaeI CTAG 6 cut(s) 15, 677, 1074, 1661, 2102, 2252
MaeIII GTNAC 9 cut(s) 290, 348, 913, 1004, 1147, 1369, 1459, 1474, 2956
MalI GATC 7 cut(s) 217, 399, 1089, 1516, 1596, 2331, 2769
MboI GATC 7 cut(s) 215, 397, 1087, 1514, 1594, 2329, 2767
MfeI CAATTG 1 cut(s) 314
MflI RGATCY 1 cut(s) 2767
MhlI GDGCHC 1 cut(s) 851
MlsI TGGCCA 1 cut(s) 2879
MluNI TGGCCA 1 cut(s) 2879
Mly113I GGCGCC 1 cut(s) 2121
MlyI GAGTC 4 cut(s) 2209, 2435, 2725, 2998
MmeI TCCRAC 4 cut(s) 1449, 1722, 1918, 3036
Mox20I TGGCCA 1 cut(s) 2879
Mph1103I ATGCAT 1 cut(s) 2358
MroXI GAANNNNTTC 3 cut(s) 407, 1724, 2016
MscI TGGCCA 1 cut(s) 2879
MseI TTAA 9 cut(s) 660, 740, 956, 1194, 1706, 1854, 1958, 2063, 2085
MslI CAYNNNNRTG 1 cut(s) 2451
Msp20I TGGCCA 1 cut(s) 2879
MspA1I CMGCKG 2 cut(s) 176, 618
MspI CCGG 5 cut(s) 414, 1215, 2588, 2700, 3039
MspR9I CCNGG 3 cut(s) 74, 1215, 1890
MunI CAATTG 1 cut(s) 314
MvaI CCWGG 2 cut(s) 74, 1890
MvnI CGCG 3 cut(s) 170, 1264, 2035
MwoI GCNNNNNNNGC 7 cut(s) 101, 110, 178, 2219, 2231, 2758, 2885
NarI GGCGCC 1 cut(s) 2121
NciI CCSGG 1 cut(s) 1215
NcoI CCATGG 1 cut(s) 1142
NdeII GATC 7 cut(s) 215, 397, 1087, 1514, 1594, 2329, 2767
NheI GCTAGC 1 cut(s) 14
NlaIV GGNNCC 9 cut(s) 89, 123, 180, 232, 418, 490, 1786, 2122, 2586
NmuCI GTSAC 3 cut(s) 913, 1004, 1474
NsiI ATGCAT 1 cut(s) 2358
NspI RCATGY 2 cut(s) 39, 2356
NspV TTCGAA 2 cut(s) 240, 901
PagI TCATGA 1 cut(s) 2419
PaqCI CACCTGC 2 cut(s) 308, 1685
PciI ACATGT 1 cut(s) 35
PciSI GCTCTTC 3 cut(s) 594, 903, 1892
PdmI GAANNNNTTC 3 cut(s) 407, 1724, 2016
PfeI GAWTC 6 cut(s) 672, 825, 1426, 1873, 2376, 3079
PflMI CCANNNNNTGG 2 cut(s) 212, 578
PfoI TCCNGGA 2 cut(s) 1213, 1888
PinAI ACCGGT 2 cut(s) 413, 3038
PkrI GCNGC 8 cut(s) 139, 923, 1717, 1793, 2071, 2212, 2224, 2856
PleI GAGTC 4 cut(s) 2208, 2434, 2725, 2998
PluTI GGCGCC 1 cut(s) 2124
PpsI GAGTC 4 cut(s) 2208, 2434, 2725, 2998
PpuMI RGGWCCY 1 cut(s) 1785
PscI ACATGT 1 cut(s) 35
PshBI ATTAAT 1 cut(s) 1958
PsiI TTATAA 1 cut(s) 1116
Psp124BI GAGCTC 1 cut(s) 851
Psp5II RGGWCCY 1 cut(s) 1785
Psp6I CCWGG 2 cut(s) 72, 1888
PspEI GGTNACC 1 cut(s) 1147
PspFI CCCAGC 3 cut(s) 259, 424, 1354
PspGI CCWGG 2 cut(s) 72, 1888
PspN4I GGNNCC 9 cut(s) 89, 123, 180, 232, 418, 490, 1786, 2122, 2586
PspPI GGNCC 9 cut(s) 121, 416, 488, 776, 1295, 1352, 1550, 1785, 1817
PspPPI RGGWCCY 1 cut(s) 1785
PstI CTGCAG 2 cut(s) 1513, 2236
PstNI CAGNNNCTG 1 cut(s) 1934
PsuI RGATCY 1 cut(s) 2767
PvuII CAGCTG 1 cut(s) 618
RsaI GTAC 3 cut(s) 1378, 2445, 2833
RsaNI GTAC 3 cut(s) 1377, 2444, 2832
RseI CAYNNNNRTG 1 cut(s) 2451
SacI GAGCTC 1 cut(s) 851
SapI GCTCTTC 3 cut(s) 594, 903, 1892
SaqAI TTAA 9 cut(s) 660, 740, 956, 1194, 1706, 1854, 1958, 2063, 2085
SatI GCNGC 8 cut(s) 138, 922, 1716, 1792, 2070, 2211, 2223, 2855
Sau3AI GATC 7 cut(s) 215, 397, 1087, 1514, 1594, 2329, 2767
Sau96I GGNCC 9 cut(s) 121, 416, 488, 776, 1295, 1352, 1550, 1785, 1817
SchI GAGTC 4 cut(s) 2209, 2435, 2725, 2998
ScrFI CCNGG 3 cut(s) 74, 1215, 1890
SduI GDGCHC 1 cut(s) 851
SfcI CTRYAG 4 cut(s) 277, 1509, 2232, 3108
SfoI GGCGCC 1 cut(s) 2122
SfuI TTCGAA 2 cut(s) 240, 901
SinI GGWCC 6 cut(s) 121, 416, 488, 1295, 1785, 1817
SmiMI CAYNNNNRTG 1 cut(s) 2451
SmlI CTYRAG 1 cut(s) 748
SmoI CTYRAG 1 cut(s) 748
SsiI CCGC 7 cut(s) 137, 176, 234, 922, 1262, 2033, 2854
SspDI GGCGCC 1 cut(s) 2120
SspI AATATT 2 cut(s) 1962, 2470
SspMI CTAG 6 cut(s) 15, 677, 1074, 1661, 2102, 2252
SstI GAGCTC 1 cut(s) 851
StyD4I CCNGG 3 cut(s) 72, 1213, 1888
StyI CCWWGG 7 cut(s) 498, 676, 1142, 1449, 1686, 2191, 2435
TaaI ACNGT 7 cut(s) 278, 692, 1289, 1561, 1834, 1864, 2262
TaqI TCGA 7 cut(s) 240, 396, 464, 597, 901, 2277, 2429
TaqII GACCGA 1 cut(s) 2795
TatI WGTACW 3 cut(s) 1376, 2443, 2831
TauI GCSGC 3 cut(s) 140, 924, 2857
TfiI GAWTC 6 cut(s) 672, 825, 1426, 1873, 2376, 3079
Tru1I TTAA 9 cut(s) 660, 740, 956, 1194, 1706, 1854, 1958, 2063, 2085
Tru9I TTAA 9 cut(s) 660, 740, 956, 1194, 1706, 1854, 1958, 2063, 2085
TseFI GTSAC 3 cut(s) 913, 1004, 1474
TseI GCWGC 5 cut(s) 1715, 1791, 2069, 2210, 2222
Tsp45I GTSAC 3 cut(s) 913, 1004, 1474
TspGWI ACGGA 1 cut(s) 134
Van91I CCANNNNNTGG 2 cut(s) 212, 578
VpaK11BI GGWCC 6 cut(s) 121, 416, 488, 1295, 1785, 1817
VspI ATTAAT 1 cut(s) 1958
XagI CCTNNNNNAGG 3 cut(s) 699, 1803, 2330
XapI RAATTY 7 cut(s) 636, 763, 814, 871, 1237, 1758, 2292
XceI RCATGY 2 cut(s) 39, 2356
XmaJI CCTAGG 1 cut(s) 676
XmiI GTMKAC 1 cut(s) 3023
XmnI GAANNNNTTC 3 cut(s) 407, 1724, 2016
XspI CTAG 6 cut(s) 15, 677, 1074, 1661, 2102, 2252
Zsp2I ATGCAT 1 cut(s) 2358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.