RchiOBHm_Chr2g0114651
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
26526276 .. 26527551
1276 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48786

Sequence Viewer

Length: 663 bp
ATGAAGAATAATCTCACCCCCAAGATATCGGATTTTGGTTTGGCTAAGCTTTTTGATGAGAAAAAGACCCACATAAGTACCCGTGTTGCGGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTGTGGCTCTTGAAATTGTCAGTGGTAGGCCAAATTCTGATCCGAGTTTGGGTGAAGAAATGACTTATCTTCTCGAATGGGCTTGGCAATTGCATGAAAACAGACGGGCAGTTGAACTAGTGGACTCTAGATTATCTGAATTCAATGAGGAAGAAGCACAACGAATAATCAAAATAGGACTTTTGTGCACTCAAACATCACCAATGCTACGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACTGACTGGAAATTTGATGATTTAACTACAGTCACCAGCCTAACAAAACTAGACGGTGTAAGTATTGTCACCAACGTGACTGATATGACGACCAGAGGAACTGATTTTAGCTTCAACAACTCATTAGCAAGTACAAGCATAATGGGGCAATCACCTCCTAATGCCATTCATTCTATGTCCAAAAATAATGTTGATGGTCGGTGA

Protein Analysis

220

Amino Acids

24.33

Weight (kDa)

5.42

Isoelectric Point (pI)

31.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 3 - 135 4.3e-14 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 5 - 133 9.4e-13 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 89
AclWI GGATC 1 cut(s) 203
AcsI RAATTY 3 cut(s) 202, 308, 470
AfaI GTAC 2 cut(s) 79, 592
AfiI CCNNNNNNNGG 3 cut(s) 88, 218, 400
AgsI TTSAA 5 cut(s) 182, 284, 313, 444, 574
AhlI ACTAGT 1 cut(s) 286
AleI CACNNNNGTG 1 cut(s) 533
AluBI AGCT 2 cut(s) 49, 570
AluI AGCT 2 cut(s) 49, 570
Alw21I GWGCWC 1 cut(s) 359
Alw44I GTGCAC 1 cut(s) 355
AlwI GGATC 1 cut(s) 203
AoxI GGCC 1 cut(s) 197
ApaLI GTGCAC 1 cut(s) 355
ApoI RAATTY 3 cut(s) 202, 308, 470
ArsI GACNNNNNNTTYG 2 cut(s) 455, 487
Asp700I GAANNNNTTC 1 cut(s) 409
AsuC2I CCSGG 1 cut(s) 450
AsuHPI GGTGA 6 cut(s) 7, 233, 360, 484, 520, 603
BaeGI GKGCMC 1 cut(s) 359
BaeI ACNNNNGTAYC 2 cut(s) 61, 94
BbsI GAAGAC 1 cut(s) 152
Bbv12I GWGCWC 1 cut(s) 359
BccI CCATC 2 cut(s) 391, 647
BcnI CCSGG 1 cut(s) 450
BcuI ACTAGT 1 cut(s) 286
BfaI CTAG 3 cut(s) 287, 297, 509
BfmI CTRYAG 1 cut(s) 486
BlpI GCTNAGC 1 cut(s) 45
Bme1390I CCNGG 1 cut(s) 450
BmrFI CCNGG 1 cut(s) 450
BoxI GACNNNNGTC 1 cut(s) 152
BpiI GAAGAC 1 cut(s) 152
Bpu1102I GCTNAGC 1 cut(s) 45
BpuMI CCSGG 1 cut(s) 450
BsaWI WCCGGW 1 cut(s) 112
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 218, 400
Bse1I ACTGG 1 cut(s) 470
BseGI GGATG 1 cut(s) 383
BseLI CCNNNNNNNGG 3 cut(s) 88, 218, 400
BseNI ACTGG 1 cut(s) 470
BseSI GKGCMC 1 cut(s) 359
BshFI GGCC 1 cut(s) 199
BsiHKAI GWGCWC 1 cut(s) 359
BsiSI CCGG 2 cut(s) 113, 450
BslFI GGGAC 1 cut(s) 376
BslI CCNNNNNNNGG 3 cut(s) 88, 218, 400
BsmFI GGGAC 1 cut(s) 376
BsmI GAATGC 1 cut(s) 411
BsnI GGCC 1 cut(s) 199
Bsp1286I GDGCHC 1 cut(s) 359
Bsp143I GATC 1 cut(s) 208
Bsp1720I GCTNAGC 1 cut(s) 45
BspACI CCGC 1 cut(s) 89
BspANI GGCC 1 cut(s) 199
BspPI GGATC 1 cut(s) 203
BsrI ACTGG 1 cut(s) 470
BssMI GATC 1 cut(s) 208
Bst4CI ACNGT 3 cut(s) 436, 490, 515
BstDEI CTNAG 1 cut(s) 45
BstF5I GGATG 1 cut(s) 383
BstKTI GATC 1 cut(s) 211
BstMBI GATC 1 cut(s) 208
BstPAI GACNNNNGTC 1 cut(s) 152
BstSCI CCNGG 1 cut(s) 448
BstSFI CTRYAG 1 cut(s) 486
BstSLI GKGCMC 1 cut(s) 359
BstV2I GAAGAC 1 cut(s) 152
BsuRI GGCC 1 cut(s) 199
BtsCI GGATG 1 cut(s) 383
BtsIMutI CAGTG 1 cut(s) 196
Csp6I GTAC 2 cut(s) 78, 591
CviAII CATG 3 cut(s) 124, 263, 388
CviJI RGCY 8 cut(s) 44, 49, 176, 199, 251, 448, 498, 570
CviKI_1 RGCY 8 cut(s) 44, 49, 176, 199, 251, 448, 498, 570
CviQI GTAC 2 cut(s) 78, 591
DdeI CTNAG 1 cut(s) 45
DpnI GATC 1 cut(s) 210
DpnII GATC 1 cut(s) 208
Eco32I GATATC 1 cut(s) 27
EcoRI GAATTC 1 cut(s) 308
EcoRV GATATC 1 cut(s) 27
FaeI CATG 3 cut(s) 127, 266, 391
FaiI YATR 9 cut(s) 74, 120, 125, 264, 389, 422, 545, 599, 635
FaqI GGGAC 1 cut(s) 376
FatI CATG 3 cut(s) 123, 262, 387
FauI CCCGC 1 cut(s) 82
FokI GGATG 1 cut(s) 370
FspBI CTAG 3 cut(s) 287, 297, 509
HaeIII GGCC 1 cut(s) 199
HapII CCGG 2 cut(s) 113, 450
Hin1II CATG 3 cut(s) 127, 266, 391
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 1 cut(s) 293
HpaII CCGG 2 cut(s) 113, 450
HphI GGTGA 6 cut(s) 7, 233, 360, 484, 520, 603
Hpy166II GTNNAC 3 cut(s) 131, 292, 357
Hpy188I TCNGA 4 cut(s) 31, 208, 213, 307
Hpy188III TCNNGA 4 cut(s) 179, 242, 297, 414
Hpy8I GTNNAC 3 cut(s) 131, 292, 357
HpyCH4III ACNGT 3 cut(s) 436, 490, 515
HpyCH4IV ACGT 1 cut(s) 534
HpyCH4V TGCA 3 cut(s) 110, 262, 357
HpyF3I CTNAG 1 cut(s) 45
HpySE526I ACGT 1 cut(s) 534
Hsp92II CATG 3 cut(s) 127, 266, 391
Kzo9I GATC 1 cut(s) 208
LpnPI CCDG 6 cut(s) 126, 399, 451, 463, 508, 565
MaeI CTAG 3 cut(s) 287, 297, 509
MaeII ACGT 1 cut(s) 534
MaeIII GTNAC 6 cut(s) 427, 436, 452, 490, 526, 535
MalI GATC 1 cut(s) 210
MboI GATC 1 cut(s) 208
MboII GAAGA 5 cut(s) 16, 157, 230, 236, 332
MfeI CAATTG 2 cut(s) 96, 257
MhlI GDGCHC 1 cut(s) 359
MluCI AATT 6 cut(s) 96, 183, 202, 257, 308, 470
MlyI GAGTC 1 cut(s) 287
MnlI CCTC 3 cut(s) 310, 548, 624
MroXI GAANNNNTTC 1 cut(s) 409
MseI TTAA 1 cut(s) 482
MslI CAYNNNNRTG 1 cut(s) 533
MspI CCGG 2 cut(s) 113, 450
MspR9I CCNGG 1 cut(s) 450
MunI CAATTG 2 cut(s) 96, 257
Mva1269I GAATGC 1 cut(s) 411
NciI CCSGG 1 cut(s) 450
NdeII GATC 1 cut(s) 208
NlaIII CATG 3 cut(s) 127, 266, 391
NmuCI GTSAC 4 cut(s) 427, 490, 526, 535
OliI CACNNNNGTG 1 cut(s) 533
PctI GAATGC 1 cut(s) 411
PdmI GAANNNNTTC 1 cut(s) 409
PleI GAGTC 1 cut(s) 287
PpsI GAGTC 1 cut(s) 287
PshAI GACNNNNGTC 1 cut(s) 152
RsaI GTAC 2 cut(s) 79, 592
RsaNI GTAC 2 cut(s) 78, 591
RseI CAYNNNNRTG 1 cut(s) 533
SaqAI TTAA 1 cut(s) 482
Sau3AI GATC 1 cut(s) 208
SchI GAGTC 1 cut(s) 287
ScrFI CCNGG 1 cut(s) 450
SduI GDGCHC 1 cut(s) 359
SetI ASST 5 cut(s) 51, 138, 537, 572, 616
SfcI CTRYAG 1 cut(s) 486
SmiMI CAYNNNNRTG 1 cut(s) 533
SpeI ACTAGT 1 cut(s) 286
Sse9I AATT 6 cut(s) 96, 183, 202, 257, 308, 470
SsiI CCGC 1 cut(s) 89
SspMI CTAG 3 cut(s) 287, 297, 509
StyD4I CCNGG 1 cut(s) 448
TaaI ACNGT 3 cut(s) 436, 490, 515
TaiI ACGT 1 cut(s) 537
TaqI TCGA 1 cut(s) 243
TasI AATT 6 cut(s) 96, 183, 202, 257, 308, 470
TatI WGTACW 1 cut(s) 590
Tru1I TTAA 1 cut(s) 482
Tru9I TTAA 1 cut(s) 482
TscAI CASTG 1 cut(s) 196
TseFI GTSAC 4 cut(s) 427, 490, 526, 535
Tsp45I GTSAC 4 cut(s) 427, 490, 526, 535
TspDTI ATGAA 3 cut(s) 17, 279, 617
TspRI CASTG 1 cut(s) 196
VneI GTGCAC 1 cut(s) 355
XapI RAATTY 3 cut(s) 202, 308, 470
XbaI TCTAGA 1 cut(s) 296
XmnI GAANNNNTTC 1 cut(s) 409
XspI CTAG 3 cut(s) 287, 297, 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.