Rw5G016460
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
20730388 .. 20740652
10265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G016460.1

Sequence Viewer

Length: 3147 bp
ATGTCGGGACGTTCATCATCATTGTCGTCTGTTCTGGTCTTTTTCCGGTGTGCTGCTGCCATCTGCTGCTTCATCTTTGGCCTTACTGGTGTAACAGAAGCTCAGGCTCCTTCTCAAGCTCCTTCATCTCAACCTCAGGCCACCACTGATCCATCTGAAGTGAAAGCTTTGAATTCAATCTTTGCGCAATGGGGGATTGAGGCCAATGTGAAGCAGTGGAACACAACTGGAGACCCATGTAGTGGAGCTGCCATTGACTCCACCGCATTCGACGATGGCGATTACAACCCCTTCATCAAATGTGACTGTTCCGATAATGTCACTTGCCACATAACCCAACTGAAAGTTTATGCCTTGGATGTTGTTGGTGTACTTCCGGATGAGTTATGGACATTGAGCTACCTATTCAATCTTAATTTGGGTCAGAATTACTTGACAGGACCTCTCTCTGCTTCCATTGGAAATCTAACTAGCATGCAATACTTGAGCCTTGGCATTAATGCTTTATCGGGCGAGCTACCAAAGGAACTCGGAAATCTCACTGAATTGCTATCATTTGCTATTGGGACAAACAACTTTTCTGGTCCTCTGCCATCTGAACTAGGGAGTTTATCAAAATTACAACAACTTTACCTTGATAGTTCTGGAGTTAGCGGTGAGATTCCATCAACATTTGCTAATCTACAAAGCTTGCATACACTTTGGGCATCAGATGTTGAACTCTCTGGCAGTATACCTGACTTCATAGGAAATTGGTCAAAGCTTACTTCCTTGAGGTTTCAAGGAAACTCCTTTGAAGGTCCTATACCATCTGCACTTTCCAATCTGACTTCTCTGACAGAGCTGTATATAACTGACATATCTACTACCAATGGGAGCTCTTCTCTTGGGTTTATTAAGGATATGAAGTCTCTATCTGTCTTAGTGCTAAGAAATAACAACATTTCTGATTCAATTCCTTCCAACATTGGAGAATACCAAAGTTTATCTCAGCTGGACTTGAGCTTCAACAATCTAACTGGACAAATACCAGACTCACTGTTTAATTTGAGTTCTCTTTCCATCCTGTTTCTTGGAAACAATAAGTTGAATGGTACTCTACCTGAATCTAAAAGCTCATCTCTTCTCAATGTAGATTTATCATACAATAATCTAGTTGGGAGCATTCCTTCTTGGGCCAACGGAACGAATTTACAGCTTAATTTAGTTGCCAACAACTTCACCCTGGACAATTCAAACAGCAGTGCTCTTCCTTCGGGGTTGAATTGCCTTCAAAGAGACTTTCCTTGCAACAGTGGGTCTGGAATTTATTATAACTTTGGGATCAAATGTGGGGGTCCTCAGATTACGTCTTCTAATAACATTGTGTATCAGACGGAAAATGAGACCCTTGGTCCAGCTACATATTTTGTGAATGACGAAAGCAGATGGGGAGTTAGCAACGTTGGGTATTTCACTGGAAGCAGCAATCCTCAGTACACAATTTTCTCCTCATCTCAATTCAAAAATACTCTAGATTCTGAGCTATTCCAGACTGCAAGGCTCTCTGCTTCATCACTTAGATATTATGGCTTGGGGCTTGAGAATGGTAACTACACAGTGAACCTACAGTTTGCTGAACAAGCTATCCTAGATTCTACTACATGGAAAAGTCTTGGGAGGCGCATGTTTAATATTTATATCCAGGGAAATCTGGTCCTAAAGGATTTTGACATACGAAAGGAGGCAGGGGGATCTTTCCTAGCTGTTCAGAAGGAATACACGGCTCAGGTTTCAGAGAACTACCTTGAAATCCATCTCTTTTGGGCCGGAAAGGGGACTTGTTGTGTACCTGCGCAGGGTACTTATGGACCTATTATTTCAGCCATTAGTGCTACACCAGATTTCGAACCTACTGTCAGTAACAATACTCCAACTAGTAAGAAGAATAGGACTGGGCTGATTGTGGGGATTGTTCTTGGTGGTGGAGTTTTAATTCTGGTGATGGTAGTTTTCTTCATTGTTCGAAGAAGAAAAAGGCCCGACTTCAATGATGTTGAAGAGCTGTTAGGGATTGATATTGGACCGCTCACTTTCAGTTATTCCGCACTAAAGTCGGCTACGAATGACTTTAGTCCGGAAAACAAGCTTGGAGAGGGAGGATTTGGACCTGTCTACAAAGGTACCCTTAACGATGGAAGAGTAATTGCCGTGAAGCAATTGTCTGCAGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCCGTGCAACACAATAACCTAGTGACTTTGTATGGGTTCTGCACTGAGGGAGTTAAAAGGCTCCTTGTCTATGAGTATCTGGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAAGAAAAGTTTGAATCTTGATTGGTCAACACGATTTGACATATGCTTGGGCGTAGCTAGAGGTTTAACTTATCTTCATGAGGAATCAAGGCTTCGAATTGTACATAGAGATGTGAAGGCTGGTAATATTCTGCTCGACTTTAATCTTATCCCCAAGATATCAGATTTTGGTTTGGCCAAGCTTTATGACAATAAAATGACCCACATAAGTACCGGGGTTGCGGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAAAAGACCGATGTGTTTGCATTTGGTGTTGTAGCTCTAGAGATTGTCAGTGGTAGGCCAAATTCTGACCCGAGTTTGGAAGAAGATAAGATGTATCTTCTGGAATGGGCTTGGAACTTGCATGAGAATAACCGTGAAGTCGAACTAGTGGACTACAGATTATCCGAATTCAATGAGGAAGAAGCAAAAAGAGTAATGAAGATAGGACTTTTATGCACTCAAACATCACCAATGCTGCGACCGACAATGTCTGGTGTTGTGGGAATGCTTACAGGAGCTATTGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACCGACTGGAAATTCAATGATGCAAGTAGTGCCAGCAACATAACACTTGGTATGTCGACTCAAGGAACTAATTCTAGCTTTTACAACTCATCGGCTAGTACAAGCATGGTAGGGGATGCAAGGCAAACACCTACAAATGACACTCATGCCATTCTTCACAATACTGTAAATGATGGTCGGTGA

Protein Analysis

1048

Amino Acids

113.88

Weight (kDa)

5.02

Isoelectric Point (pI)

35.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 125 - 213 3.9e-06 Leucine-rich repeat region
LRR_14 PF23598 200 - 306 3.5e-09 Leucine-rich repeat region
Malectin PF11721 440 - 623 2.1e-43 Malectin domain
Pkinase PF00069 706 - 966 4.3e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 707 - 969 3.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1314
Acc16I TGCGCA 2 cut(s) 186, 1836
Acc36I ACCTGC 1 cut(s) 1840
Acc65I GGTACC 1 cut(s) 2162
AccB1I GGYRCC 1 cut(s) 2162
AccB7I CCANNNNNTGG 1 cut(s) 242
AccBSI CCGCTC 1 cut(s) 2068
AccI GTMKAC 3 cut(s) 733, 2154, 3020
AccIII TCCGGA 2 cut(s) 376, 2116
AciI CCGC 5 cut(s) 264, 654, 2066, 2085, 2594
AclI AACGTT 1 cut(s) 1443
AclWI GGATC 3 cut(s) 143, 1331, 1741
AcoI YGGCCR 1 cut(s) 2547
AcsI RAATTY 6 cut(s) 172, 1189, 1305, 2707, 2813, 2975
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 9 cut(s) 372, 1096, 1478, 1830, 1843, 2164, 2475, 2584, 3064
AfiI CCNNNNNNNGG 4 cut(s) 242, 1815, 1838, 2722
AhdI GACNNNNNGTC 1 cut(s) 1392
AhlI ACTAGT 2 cut(s) 1916, 2791
AjnI CCWGG 2 cut(s) 1224, 1683
AjuI GAANNNNNNNTTGG 2 cut(s) 2112, 2144
AloI GAACNNNNNNTCC 2 cut(s) 1611, 1643
Alw21I GWGCWC 2 cut(s) 881, 1249
Alw26I GTCTC 4 cut(s) 225, 915, 1272, 1379
AlwI GGATC 3 cut(s) 143, 1331, 1741
Ama87I CYCGRG 1 cut(s) 2716
Aor13HI TCCGGA 2 cut(s) 376, 2116
AoxI GGCC 8 cut(s) 79, 138, 201, 1176, 1806, 2018, 2547, 2702
ApeKI GCWGC 7 cut(s) 53, 56, 66, 248, 1464, 2207, 2881
ApoI RAATTY 6 cut(s) 172, 1189, 1305, 2707, 2813, 2975
ArsI GACNNNNNNTTYG 2 cut(s) 1881, 1913
AseI ATTAAT 1 cut(s) 498
Asp700I GAANNNNTTC 1 cut(s) 3034
Asp718I GGTACC 1 cut(s) 2162
AspLEI GCGC 3 cut(s) 187, 1665, 1837
AsuC2I CCSGG 2 cut(s) 2587, 2955
AsuHPI GGTGA 4 cut(s) 668, 1213, 1993, 2865
AsuII TTCGAA 3 cut(s) 1887, 2005, 2467
AvaI CYCGRG 1 cut(s) 2716
AvaII GGWCC 9 cut(s) 440, 584, 800, 1337, 1394, 1696, 1850, 2063, 2147
AxyI CCTNAGG 1 cut(s) 135
BaeI ACNNNNGTAYC 4 cut(s) 2146, 2179, 2566, 2599
BalI TGGCCA 1 cut(s) 2549
BanI GGYRCC 1 cut(s) 2162
BanII GRGCYC 1 cut(s) 881
BarI GAAGNNNNNNTAC 2 cut(s) 789, 821
BbsI GAAGAC 1 cut(s) 1344
Bbv12I GWGCWC 2 cut(s) 881, 1249
BbvI GCAGC 7 cut(s) 40, 43, 53, 235, 1476, 2219, 2868
BceAI ACGGC 3 cut(s) 1779, 2174, 2246
BcgI CGANNNNNNTGC 4 cut(s) 2076, 2110, 2645, 2679
BciT130I CCWGG 2 cut(s) 1226, 1685
BclI TGATCA 1 cut(s) 2356
BcnI CCSGG 2 cut(s) 2587, 2955
BcoDI GTCTC 4 cut(s) 225, 915, 1272, 1379
BcuI ACTAGT 2 cut(s) 1916, 2791
BfmI CTRYAG 3 cut(s) 1607, 2205, 2800
BfuAI ACCTGC 1 cut(s) 1840
BisI GCNGC 7 cut(s) 54, 57, 67, 249, 1465, 2208, 2882
BlsI GCNGC 7 cut(s) 55, 58, 68, 250, 1466, 2209, 2883
Bme1390I CCNGG 4 cut(s) 1226, 1685, 2587, 2955
Bme18I GGWCC 9 cut(s) 440, 584, 800, 1337, 1394, 1696, 1850, 2063, 2147
BmeRI GACNNNNNGTC 1 cut(s) 1392
BmeT110I CYCGRG 1 cut(s) 2716
BmiI GGNNCC 4 cut(s) 108, 1338, 2164, 2321
BmrFI CCNGG 4 cut(s) 1226, 1685, 2587, 2955
BmrI ACTGGG 1 cut(s) 1944
BmsI GCATC 4 cut(s) 716, 2219, 2974, 3070
BmuI ACTGGG 1 cut(s) 1944
BoxI GACNNNNGTC 1 cut(s) 2112
BpiI GAAGAC 1 cut(s) 1344
BplI GAGNNNNNCTC 2 cut(s) 868, 900
BpmI CTGGAG 2 cut(s) 249, 666
Bpu10I CCTNAGC 2 cut(s) 102, 1767
Bpu14I TTCGAA 3 cut(s) 1887, 2005, 2467
BpuEI CTTGAG 6 cut(s) 99, 505, 793, 1021, 1601, 3009
BpuMI CCSGG 2 cut(s) 2587, 2955
BsaI GGTCTC 2 cut(s) 225, 1379
BsaJI CCNNGG 7 cut(s) 354, 490, 1224, 1390, 1684, 2218, 2586
BsaWI WCCGGW 4 cut(s) 45, 376, 2116, 2617
Bsc4I CCNNNNNNNGG 4 cut(s) 242, 1815, 1838, 2722
Bse1I ACTGG 7 cut(s) 91, 232, 1024, 1462, 1939, 2230, 2975
Bse21I CCTNAGG 1 cut(s) 135
Bse3DI GCAATG 1 cut(s) 194
BseAI TCCGGA 2 cut(s) 376, 2116
BseBI CCWGG 2 cut(s) 1226, 1685
BseDI CCNNGG 7 cut(s) 354, 490, 1224, 1390, 1684, 2218, 2586
BseGI GGATG 5 cut(s) 364, 385, 1062, 2210, 3085
BseLI CCNNNNNNNGG 4 cut(s) 242, 1815, 1838, 2722
BseMI GCAATG 1 cut(s) 194
BseMII CTCAG 9 cut(s) 116, 149, 1004, 1355, 1487, 1512, 1781, 2232, 2295
BseNI ACTGG 7 cut(s) 91, 232, 1024, 1462, 1939, 2230, 2975
BseRI GAGGAG 1 cut(s) 1480
BseXI GCAGC 7 cut(s) 40, 43, 53, 235, 1476, 2219, 2868
BsgI GTGCAG 2 cut(s) 798, 2284
Bsh1285I CGRYCG 1 cut(s) 2888
BshFI GGCC 8 cut(s) 81, 140, 203, 1178, 1808, 2020, 2549, 2704
BshNI GGYRCC 1 cut(s) 2162
BsiEI CGRYCG 1 cut(s) 2888
BsiHKAI GWGCWC 2 cut(s) 881, 1249
BsiHKCI CYCGRG 1 cut(s) 2716
BsiSI CCGG 7 cut(s) 46, 377, 1809, 2117, 2586, 2618, 2955
BslFI GGGAC 3 cut(s) 21, 580, 1831
BslI CCNNNNNNNGG 4 cut(s) 242, 1815, 1838, 2722
BsmAI GTCTC 4 cut(s) 225, 915, 1272, 1379
BsmFI GGGAC 3 cut(s) 21, 580, 1831
BsmI GAATGC 3 cut(s) 266, 1164, 2916
BsnI GGCC 8 cut(s) 81, 140, 203, 1178, 1808, 2020, 2549, 2704
Bso31I GGTCTC 2 cut(s) 225, 1379
BsoBI CYCGRG 1 cut(s) 2716
Bsp119I TTCGAA 3 cut(s) 1887, 2005, 2467
Bsp1286I GDGCHC 2 cut(s) 881, 1249
Bsp13I TCCGGA 2 cut(s) 376, 2116
Bsp1407I TGTACA 1 cut(s) 2473
Bsp143I GATC 4 cut(s) 148, 1323, 1733, 2356
BspACI CCGC 5 cut(s) 264, 654, 2066, 2085, 2594
BspANI GGCC 8 cut(s) 81, 140, 203, 1178, 1808, 2020, 2549, 2704
BspCNI CTCAG 9 cut(s) 115, 148, 1003, 1354, 1486, 1513, 1780, 2233, 2296
BspEI TCCGGA 2 cut(s) 376, 2116
BspHI TCATGA 1 cut(s) 2449
BspLI GGNNCC 4 cut(s) 108, 1338, 2164, 2321
BspMAI CTGCAG 1 cut(s) 2209
BspMI ACCTGC 1 cut(s) 1840
BspPI GGATC 3 cut(s) 143, 1331, 1741
BspQI GCTCTTC 3 cut(s) 886, 1254, 2034
BspT104I TTCGAA 3 cut(s) 1887, 2005, 2467
BspT107I GGYRCC 1 cut(s) 2162
BspTNI GGTCTC 2 cut(s) 225, 1379
BsrBI CCGCTC 1 cut(s) 2068
BsrDI GCAATG 1 cut(s) 194
BsrGI TGTACA 1 cut(s) 2473
BsrI ACTGG 7 cut(s) 91, 232, 1024, 1462, 1939, 2230, 2975
BssECI CCNNGG 7 cut(s) 354, 490, 1224, 1390, 1684, 2218, 2586
BssMI GATC 4 cut(s) 148, 1323, 1733, 2356
BssNAI GTATAC 1 cut(s) 734
BssT1I CCWWGG 4 cut(s) 354, 490, 1390, 2218
Bst1107I GTATAC 1 cut(s) 734
Bst2UI CCWGG 2 cut(s) 1226, 1685
Bst4CI ACNGT 9 cut(s) 308, 1041, 1295, 1600, 1611, 1897, 2780, 2941, 3130
Bst6I CTCTTC 5 cut(s) 886, 1128, 1254, 2034, 2173
BstAPI GCANNNNNTGC 1 cut(s) 2993
BstAUI TGTACA 1 cut(s) 2473
BstBI TTCGAA 3 cut(s) 1887, 2005, 2467
BstC8I GCNNGC 4 cut(s) 476, 515, 692, 2998
BstF5I GGATG 5 cut(s) 364, 385, 1062, 2210, 3085
BstHHI GCGC 3 cut(s) 187, 1665, 1837
BstKTI GATC 4 cut(s) 151, 1326, 1736, 2359
BstMAI GTCTC 4 cut(s) 225, 915, 1272, 1379
BstMBI GATC 4 cut(s) 148, 1323, 1733, 2356
BstMCI CGRYCG 1 cut(s) 2888
BstMWI GCNNNNNNNGC 3 cut(s) 1622, 1871, 2993
BstNI CCWGG 2 cut(s) 1226, 1685
BstNSI RCATGY 2 cut(s) 478, 1669
BstPAI GACNNNNGTC 1 cut(s) 2112
BstSCI CCNGG 4 cut(s) 1224, 1683, 2585, 2953
BstSFI CTRYAG 3 cut(s) 1607, 2205, 2800
BstV1I GCAGC 7 cut(s) 40, 43, 53, 235, 1476, 2219, 2868
BstV2I GAAGAC 1 cut(s) 1344
BstX2I RGATCY 1 cut(s) 1733
BstYI RGATCY 1 cut(s) 1733
BstZ17I GTATAC 1 cut(s) 734
Bsu36I CCTNAGG 1 cut(s) 135
BsuRI GGCC 8 cut(s) 81, 140, 203, 1178, 1808, 2020, 2549, 2704
BtsCI GGATG 5 cut(s) 364, 385, 1062, 2210, 3085
BtsI GCAGTG 2 cut(s) 221, 1249
BveI ACCTGC 1 cut(s) 1840
Cac8I GCNNGC 4 cut(s) 476, 515, 692, 2998
CciI TCATGA 1 cut(s) 2449
CfoI GCGC 3 cut(s) 187, 1665, 1837
Csp6I GTAC 9 cut(s) 371, 1095, 1477, 1829, 1842, 2163, 2474, 2583, 3063
CviAII CATG 9 cut(s) 237, 475, 1644, 1666, 2450, 2629, 2768, 3070, 3110
CviQI GTAC 9 cut(s) 371, 1095, 1477, 1829, 1842, 2163, 2474, 2583, 3063
DpnI GATC 4 cut(s) 150, 1325, 1735, 2358
DpnII GATC 4 cut(s) 148, 1323, 1733, 2356
DriI GACNNNNNGTC 1 cut(s) 1392
EaeI YGGCCR 1 cut(s) 2547
Eam1104I CTCTTC 5 cut(s) 886, 1128, 1254, 2034, 2173
Eam1105I GACNNNNNGTC 1 cut(s) 1392
EarI CTCTTC 5 cut(s) 886, 1128, 1254, 2034, 2173
Ecl136II GAGCTC 1 cut(s) 879
Eco130I CCWWGG 4 cut(s) 354, 490, 1390, 2218
Eco24I GRGCYC 1 cut(s) 881
Eco31I GGTCTC 2 cut(s) 225, 1379
Eco32I GATATC 1 cut(s) 2532
Eco47I GGWCC 9 cut(s) 440, 584, 800, 1337, 1394, 1696, 1850, 2063, 2147
Eco53kI GAGCTC 1 cut(s) 879
Eco57I CTGAAG 1 cut(s) 177
Eco81I CCTNAGG 1 cut(s) 135
Eco88I CYCGRG 1 cut(s) 2716
EcoICRI GAGCTC 1 cut(s) 879
EcoO109I RGGNCCY 3 cut(s) 440, 800, 1337
EcoRI GAATTC 2 cut(s) 172, 2813
EcoRII CCWGG 2 cut(s) 1224, 1683
EcoRV GATATC 1 cut(s) 2532
EcoT14I CCWWGG 4 cut(s) 354, 490, 1390, 2218
EcoT38I GRGCYC 1 cut(s) 881
ErhI CCWWGG 4 cut(s) 354, 490, 1390, 2218
FaeI CATG 9 cut(s) 240, 478, 1647, 1669, 2453, 2632, 2771, 3073, 3113
FalI AAGNNNNNCTT 2 cut(s) 2151, 2183
FaqI GGGAC 3 cut(s) 21, 580, 1831
FatI CATG 9 cut(s) 236, 474, 1643, 1665, 2449, 2628, 2767, 3069, 3109
FauI CCCGC 1 cut(s) 2587
FauNDI CATATG 1 cut(s) 2414
FbaI TGATCA 1 cut(s) 2356
FblI GTMKAC 3 cut(s) 733, 2154, 3020
Fnu4HI GCNGC 7 cut(s) 54, 57, 67, 249, 1465, 2208, 2882
FokI GGATG 5 cut(s) 371, 392, 1049, 2197, 3092
FriOI GRGCYC 1 cut(s) 881
Fsp4HI GCNGC 7 cut(s) 54, 57, 67, 249, 1465, 2208, 2882
FspI TGCGCA 2 cut(s) 186, 1836
GlaI GCGC 3 cut(s) 186, 1664, 1836
GluI GCNGC 7 cut(s) 54, 57, 67, 249, 1465, 2208, 2882
GsuI CTGGAG 2 cut(s) 249, 666
HaeIII GGCC 8 cut(s) 81, 140, 203, 1178, 1808, 2020, 2549, 2704
HapII CCGG 7 cut(s) 46, 377, 1809, 2117, 2586, 2618, 2955
HhaI GCGC 3 cut(s) 187, 1665, 1837
Hin1II CATG 9 cut(s) 240, 478, 1647, 1669, 2453, 2632, 2771, 3073, 3113
Hin6I GCGC 3 cut(s) 185, 1663, 1835
HinP1I GCGC 3 cut(s) 185, 1663, 1835
HincII GTYRAC 2 cut(s) 2400, 3021
HindII GTYRAC 2 cut(s) 2400, 3021
HindIII AAGCTT 5 cut(s) 165, 688, 761, 2126, 2552
HpaII CCGG 7 cut(s) 46, 377, 1809, 2117, 2586, 2618, 2955
HphI GGTGA 4 cut(s) 668, 1213, 1993, 2865
Hpy99I CGWCG 1 cut(s) 275
HpyCH4III ACNGT 9 cut(s) 308, 1041, 1295, 1600, 1611, 1897, 2780, 2941, 3130
HpyCH4IV ACGT 3 cut(s) 10, 1349, 1443
HpyF10VI GCNNNNNNNGC 3 cut(s) 1622, 1871, 2993
HpySE526I ACGT 3 cut(s) 10, 1349, 1443
Hsp92II CATG 9 cut(s) 240, 478, 1647, 1669, 2453, 2632, 2771, 3073, 3113
HspAI GCGC 3 cut(s) 185, 1663, 1835
Kpn2I TCCGGA 2 cut(s) 376, 2116
KpnI GGTACC 1 cut(s) 2166
Ksp22I TGATCA 1 cut(s) 2356
Kzo9I GATC 4 cut(s) 148, 1323, 1733, 2356
LguI GCTCTTC 3 cut(s) 886, 1254, 2034
LmnI GCTCC 7 cut(s) 112, 124, 245, 876, 1161, 2325, 2921
Lsp1109I GCAGC 7 cut(s) 40, 43, 53, 235, 1476, 2219, 2868
LweI GCATC 4 cut(s) 716, 2219, 2974, 3070
MaeII ACGT 3 cut(s) 10, 1349, 1443
MalI GATC 4 cut(s) 150, 1325, 1735, 2358
MbiI CCGCTC 1 cut(s) 2068
MboI GATC 4 cut(s) 148, 1323, 1733, 2356
MfeI CAATTG 2 cut(s) 2198, 2601
MflI RGATCY 1 cut(s) 1733
MhlI GDGCHC 2 cut(s) 881, 1249
MlsI TGGCCA 1 cut(s) 2549
MluNI TGGCCA 1 cut(s) 2549
MlyI GAGTC 4 cut(s) 251, 1028, 2359, 3016
MmeI TCCRAC 2 cut(s) 987, 1937
Mox20I TGGCCA 1 cut(s) 2549
MroI TCCGGA 2 cut(s) 376, 2116
MroXI GAANNNNTTC 1 cut(s) 3034
MscI TGGCCA 1 cut(s) 2549
MslI CAYNNNNRTG 1 cut(s) 2481
Msp20I TGGCCA 1 cut(s) 2549
MspA1I CMGCKG 1 cut(s) 994
MspI CCGG 7 cut(s) 46, 377, 1809, 2117, 2586, 2618, 2955
MspR9I CCNGG 4 cut(s) 1226, 1685, 2587, 2955
MunI CAATTG 2 cut(s) 2198, 2601
Mva1269I GAATGC 3 cut(s) 266, 1164, 2916
MvaI CCWGG 2 cut(s) 1226, 1685
MwoI GCNNNNNNNGC 3 cut(s) 1622, 1871, 2993
NciI CCSGG 2 cut(s) 2587, 2955
NdeI CATATG 1 cut(s) 2414
NdeII GATC 4 cut(s) 148, 1323, 1733, 2356
NlaIII CATG 9 cut(s) 240, 478, 1647, 1669, 2453, 2632, 2771, 3073, 3113
NlaIV GGNNCC 4 cut(s) 108, 1338, 2164, 2321
NmuCI GTSAC 4 cut(s) 302, 319, 2281, 2932
NsbI TGCGCA 2 cut(s) 186, 1836
NspI RCATGY 2 cut(s) 478, 1669
NspV TTCGAA 3 cut(s) 1887, 2005, 2467
PaeI GCATGC 1 cut(s) 478
PagI TCATGA 1 cut(s) 2449
PciSI GCTCTTC 3 cut(s) 886, 1254, 2034
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PctI GAATGC 3 cut(s) 266, 1164, 2916
PdmI GAANNNNTTC 1 cut(s) 3034
PfeI GAWTC 7 cut(s) 661, 950, 1106, 1517, 1634, 2386, 2456
PflFI GACNNNGTC 1 cut(s) 2893
PflMI CCANNNNNTGG 1 cut(s) 242
PkrI GCNGC 7 cut(s) 55, 58, 68, 250, 1466, 2209, 2883
PleI GAGTC 4 cut(s) 251, 1028, 2358, 3016
PpsI GAGTC 4 cut(s) 251, 1028, 2358, 3016
PpuMI RGGWCCY 3 cut(s) 440, 800, 1337
PshAI GACNNNNGTC 1 cut(s) 2112
PshBI ATTAAT 1 cut(s) 498
PsiI TTATAA 1 cut(s) 1314
Psp124BI GAGCTC 1 cut(s) 881
Psp1406I AACGTT 1 cut(s) 1443
Psp5II RGGWCCY 3 cut(s) 440, 800, 1337
Psp6I CCWGG 2 cut(s) 1224, 1683
PspGI CCWGG 2 cut(s) 1224, 1683
PspN4I GGNNCC 4 cut(s) 108, 1338, 2164, 2321
PspPPI RGGWCCY 3 cut(s) 440, 800, 1337
PstI CTGCAG 1 cut(s) 2209
PsuI RGATCY 1 cut(s) 1733
PsyI GACNNNGTC 1 cut(s) 2893
PvuII CAGCTG 1 cut(s) 994
RsaI GTAC 9 cut(s) 372, 1096, 1478, 1830, 1843, 2164, 2475, 2584, 3064
RsaNI GTAC 9 cut(s) 371, 1095, 1477, 1829, 1842, 2163, 2474, 2583, 3063
RseI CAYNNNNRTG 1 cut(s) 2481
SacI GAGCTC 1 cut(s) 881
SalI GTCGAC 1 cut(s) 3019
SapI GCTCTTC 3 cut(s) 886, 1254, 2034
SatI GCNGC 7 cut(s) 54, 57, 67, 249, 1465, 2208, 2882
Sau3AI GATC 4 cut(s) 148, 1323, 1733, 2356
SchI GAGTC 4 cut(s) 251, 1028, 2359, 3016
ScrFI CCNGG 4 cut(s) 1226, 1685, 2587, 2955
SduI GDGCHC 2 cut(s) 881, 1249
SfaNI GCATC 4 cut(s) 716, 2219, 2974, 3070
SfcI CTRYAG 3 cut(s) 1607, 2205, 2800
SfuI TTCGAA 3 cut(s) 1887, 2005, 2467
SinI GGWCC 9 cut(s) 440, 584, 800, 1337, 1394, 1696, 1850, 2063, 2147
SmiMI CAYNNNNRTG 1 cut(s) 2481
SmlI CTYRAG 6 cut(s) 114, 484, 772, 1000, 1580, 3024
SmoI CTYRAG 6 cut(s) 114, 484, 772, 1000, 1580, 3024
SpeI ACTAGT 2 cut(s) 1916, 2791
SphI GCATGC 1 cut(s) 478
SsiI CCGC 5 cut(s) 264, 654, 2066, 2085, 2594
SspI AATATT 2 cut(s) 1675, 2500
SstI GAGCTC 1 cut(s) 881
StyD4I CCNGG 4 cut(s) 1224, 1683, 2585, 2953
StyI CCWWGG 4 cut(s) 354, 490, 1390, 2218
TaaI ACNGT 9 cut(s) 308, 1041, 1295, 1600, 1611, 1897, 2780, 2941, 3130
TaiI ACGT 3 cut(s) 13, 1352, 1446
TaqI TCGA 7 cut(s) 270, 1887, 2005, 2467, 2508, 2787, 3020
TaqII GACCGA 3 cut(s) 2669, 2902, 2981
TatI WGTACW 4 cut(s) 370, 1476, 2473, 3062
TfiI GAWTC 7 cut(s) 661, 950, 1106, 1517, 1634, 2386, 2456
TseFI GTSAC 4 cut(s) 302, 319, 2281, 2932
TseI GCWGC 7 cut(s) 53, 56, 66, 248, 1464, 2207, 2881
Tsp45I GTSAC 4 cut(s) 302, 319, 2281, 2932
TspDTI ATGAA 9 cut(s) 61, 114, 283, 733, 920, 1542, 1987, 2438, 2858
TspGWI ACGGA 2 cut(s) 1197, 1391
Tth111I GACNNNGTC 1 cut(s) 2893
Van91I CCANNNNNTGG 1 cut(s) 242
VpaK11BI GGWCC 9 cut(s) 440, 584, 800, 1337, 1394, 1696, 1850, 2063, 2147
VspI ATTAAT 1 cut(s) 498
XapI RAATTY 6 cut(s) 172, 1189, 1305, 2707, 2813, 2975
XbaI TCTAGA 2 cut(s) 1513, 2683
XceI RCATGY 2 cut(s) 478, 1669
XmiI GTMKAC 3 cut(s) 733, 2154, 3020
XmnI GAANNNNTTC 1 cut(s) 3034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.