Rroxscaffold_1G00058940

Di-glucose binding within endoplasmic reticulum

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000088
Physical Location & Seq
Reverse (-)
80916406 .. 80932890
16485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00058940.1

Sequence Viewer

Length: 1527 bp
ATGACTGCATTGACATTATTGTCAATTGCTCACAATGCATTCTCTGGGCCCATCCCCAAGGAGCTTGGAAACCTCAAGGACTTAAATATGCTGTCCTTTGGAATAAATAACTTCTCTGGAACACTGCCTCCCGAACTTGGTAATTTGGTCAAGCTTCAACAACTTTACATAAACAGCTGCGGACTCGGTGGTGAAATTCCTTCAACATTTGCTAACCTCCGCAATATGCAAGTCCTATGGGCATCAGACAGTCCCTTCTCAGGAAGGATACCTGATTTCATTGGGAATTGGACAAAGATAAACTCTCTGCGATTTCAAGGGAACTCTTTTAGAGGTCCAATACCGACCAGTTTTTCTCAACTAACTGCCTTGAATTCTCTGCGAATCAGTGATATCTACAATGTAAGCTCCTCTCTTGATTTCATAAAGAATTTGAAGAGCTTGACTGATTTAGCGCTACGAAATGCATTAATTACTGGTAGCATCCCTTCTGATATTGGAGAATACCAAAGTTTACAGATACTGGATTTGAGTTTCAACAATTTAACAGGTCAACTTCCAGGTGGCTTGTTCAACATGAGTTCTCTAACATACTTATTTCTTGGAAACAATAGCTTGCAGGGAGCTCTTCCTAGCCAAAAGAGTGATATTCTTCACACCATAGATTTGTCTTACAACTATTTATCGGGAAGTTTTCCCCCATGGGTAACCTCAATATCACAGCTGAACTTAGTGGTGAACAACTTCACATTGGACAGTTCAAACATAAATCTTCCTGGATTAAATTGCCTTCAAAGAAATTTTCCATGCAATAGAAATACCCCAAAATATGCAAAATTCTCAATCAACTGTGGTGGACTAGAATTGAGAGGGAGTGATGACATATTGTATGAGACTGAAGACTCAGCTCTTGGCCCAGCAACGTTTATTGTAACAAGTTCAGAGAAATGGGCTGTTAGCAATGTGGGTTTGTTTGCTGACAGAAAGAATCCGAGCTTTGTGGTAAATACCCTGGCACAAGTCAATAGGACAGATGTGACCCCAGAGCTTTTCCAGACCTCAAGGTTGTCTCCAGGATCACTGAGATACTATGGCCTGGGTCTTGAGAATGGGCCTTATACTGTAAAATTGCAATTTGCAGAAACAGTTTTCGATGATCGTGCCATGCAAACTTGGCAAAGTCTAGGACGGCGTATGTTTGATATCTATATTCAGGGGAACCTTGTATTGAAGGACTTTGACATATCAAAGGAGGCAGGAGGGGTTTTAAGAGCTGTTGTGAAAACCTTCAGTGTTAATGTTTCAGAGAATTATCTTGAAATTCATTTATTCTGGGCTGGTAAGGGGACCTGCTGCACACCTGATCAAGGTCATTACGGCCCACTAATAGCTGCTGTGCATGCTGCTTCAGATTTTACACCAACTGTTTCTGGTGTTCCACCAACTACTGTAGGAATGAAGAGCAGGACAGGACTGATGGGTATTCTGGTTCCTGTTGGAGTTTTGGTGTTGCTAGTTATAATTTGA

Protein Analysis

508

Amino Acids

55.37

Weight (kDa)

6.24

Isoelectric Point (pI)

33.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 20 - 129 3.7e-09 Leucine-rich repeat region
LRR_14 PF23598 119 - 204 5e-07 Leucine-rich repeat region
Malectin PF11721 280 - 466 1e-37 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1520
AasI GACNNNNNNGTC 1 cut(s) 19
Acc36I ACCTGC 1 cut(s) 1358
AciI CCGC 2 cut(s) 180, 220
AclI AACGTT 1 cut(s) 923
AclWI GGATC 1 cut(s) 1084
AcsI RAATTY 6 cut(s) 195, 373, 430, 799, 836, 1320
AcuI CTGAAG 3 cut(s) 918, 1273, 1392
AfeI AGCGCT 1 cut(s) 456
AfiI CCNNNNNNNGG 3 cut(s) 137, 260, 1367
AjnI CCWGG 5 cut(s) 559, 775, 1011, 1072, 1095
AloI GAACNNNNNNTCC 2 cut(s) 112, 144
Alw21I GWGCWC 1 cut(s) 628
Alw26I GTCTC 2 cut(s) 887, 1074
AlwI GGATC 1 cut(s) 1084
AlwNI CAGNNNCTG 1 cut(s) 523
Aor51HI AGCGCT 1 cut(s) 456
AoxI GGCC 5 cut(s) 47, 913, 1093, 1112, 1378
ApaI GGGCCC 1 cut(s) 51
ApeKI GCWGC 4 cut(s) 177, 1353, 1391, 1403
ApoI RAATTY 6 cut(s) 195, 373, 430, 799, 836, 1320
AseI ATTAAT 1 cut(s) 470
Asp700I GAANNNNTTC 2 cut(s) 743, 1286
AspLEI GCGC 1 cut(s) 457
AspS9I GGNCC 7 cut(s) 47, 48, 335, 914, 1112, 1347, 1379
AsuHPI GGTGA 2 cut(s) 203, 748
AvaII GGWCC 2 cut(s) 335, 1347
BaeGI GKGCMC 1 cut(s) 51
BanII GRGCYC 2 cut(s) 51, 628
BarI GAAGNNNNNNTAC 2 cut(s) 472, 504
BbsI GAAGAC 1 cut(s) 906
Bbv12I GWGCWC 1 cut(s) 628
BbvI GCAGC 4 cut(s) 164, 1340, 1378, 1390
BccI CCATC 2 cut(s) 59, 1471
BceAI ACGGC 2 cut(s) 1205, 1393
BcgI CGANNNNNNTGC 2 cut(s) 1142, 1176
BciT130I CCWGG 5 cut(s) 561, 777, 1013, 1074, 1097
BciVI GTATCC 1 cut(s) 261
BclI TGATCA 1 cut(s) 1363
BcoDI GTCTC 2 cut(s) 887, 1074
BfaI CTAG 4 cut(s) 633, 860, 1184, 1514
BfmI CTRYAG 1 cut(s) 1449
BfoI RGCGCY 1 cut(s) 458
BfuAI ACCTGC 1 cut(s) 1358
BfuI GTATCC 1 cut(s) 261
BisI GCNGC 4 cut(s) 178, 1354, 1392, 1404
BlsI GCNGC 4 cut(s) 179, 1355, 1393, 1405
Bme1390I CCNGG 5 cut(s) 561, 777, 1013, 1074, 1097
Bme18I GGWCC 2 cut(s) 335, 1347
BmgT120I GGNCC 7 cut(s) 47, 48, 335, 914, 1112, 1347, 1379
BmiI GGNNCC 4 cut(s) 49, 1220, 1348, 1491
BmrFI CCNGG 5 cut(s) 561, 777, 1013, 1074, 1097
BmsI GCATC 2 cut(s) 251, 492
BpiI GAAGAC 1 cut(s) 906
BpmI CTGGAG 1 cut(s) 1056
BpuEI CTTGAG 3 cut(s) 59, 1045, 1124
BsaJI CCNNGG 4 cut(s) 57, 701, 1011, 1096
BsaXI ACNNNNNCTCC 4 cut(s) 112, 142, 1491, 1521
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 260, 1367
Bse1I ACTGG 3 cut(s) 348, 481, 528
Bse3DI GCAATG 1 cut(s) 967
BseBI CCWGG 5 cut(s) 561, 777, 1013, 1074, 1097
BseDI CCNNGG 4 cut(s) 57, 701, 1011, 1096
BseGI GGATG 2 cut(s) 51, 483
BseLI CCNNNNNNNGG 3 cut(s) 137, 260, 1367
BseMI GCAATG 1 cut(s) 967
BseMII CTCAG 3 cut(s) 273, 918, 1073
BseNI ACTGG 3 cut(s) 348, 481, 528
BseRI GAGGAG 1 cut(s) 400
BseSI GKGCMC 1 cut(s) 51
BseXI GCAGC 4 cut(s) 164, 1340, 1378, 1390
BseYI CCCAGC 1 cut(s) 916
BsgI GTGCAG 1 cut(s) 1339
BshFI GGCC 5 cut(s) 49, 915, 1095, 1114, 1380
BsiHKAI GWGCWC 1 cut(s) 628
BslFI GGGAC 2 cut(s) 237, 1360
BslI CCNNNNNNNGG 3 cut(s) 137, 260, 1367
BsmAI GTCTC 2 cut(s) 887, 1074
BsmFI GGGAC 2 cut(s) 237, 1360
BsmI GAATGC 1 cut(s) 38
BsnI GGCC 5 cut(s) 49, 915, 1095, 1114, 1380
Bsp120I GGGCCC 1 cut(s) 47
Bsp1286I GDGCHC 2 cut(s) 51, 628
Bsp143I GATC 3 cut(s) 1076, 1156, 1363
Bsp19I CCATGG 1 cut(s) 701
BspACI CCGC 2 cut(s) 180, 220
BspANI GGCC 5 cut(s) 49, 915, 1095, 1114, 1380
BspCNI CTCAG 3 cut(s) 272, 917, 1074
BspLI GGNNCC 4 cut(s) 49, 1220, 1348, 1491
BspMI ACCTGC 1 cut(s) 1358
BspPI GGATC 1 cut(s) 1084
BspQI GCTCTTC 3 cut(s) 431, 633, 1454
BsrDI GCAATG 1 cut(s) 967
BsrI ACTGG 3 cut(s) 348, 481, 528
BssECI CCNNGG 4 cut(s) 57, 701, 1011, 1096
BssMI GATC 3 cut(s) 1076, 1156, 1363
BssT1I CCWWGG 2 cut(s) 57, 701
Bst2UI CCWGG 5 cut(s) 561, 777, 1013, 1074, 1097
Bst4CI ACNGT 7 cut(s) 251, 758, 851, 1123, 1147, 1426, 1450
Bst6I CTCTTC 3 cut(s) 431, 633, 1454
BstC8I GCNNGC 2 cut(s) 617, 1401
BstDEI CTNAG 4 cut(s) 259, 730, 904, 1082
BstDSI CCRYGG 1 cut(s) 701
BstEII GGTNACC 1 cut(s) 706
BstENI CCTNNNNNAGG 1 cut(s) 1365
BstF5I GGATG 2 cut(s) 51, 483
BstH2I RGCGCY 1 cut(s) 458
BstHHI GCGC 1 cut(s) 457
BstKTI GATC 3 cut(s) 1079, 1159, 1366
BstMAI GTCTC 2 cut(s) 887, 1074
BstMBI GATC 3 cut(s) 1076, 1156, 1363
BstMWI GCNNNNNNNGC 3 cut(s) 35, 1174, 1400
BstNI CCWGG 5 cut(s) 561, 777, 1013, 1074, 1097
BstNSI RCATGY 1 cut(s) 1403
BstPI GGTNACC 1 cut(s) 706
BstSCI CCNGG 5 cut(s) 559, 775, 1011, 1072, 1095
BstSFI CTRYAG 1 cut(s) 1449
BstSLI GKGCMC 1 cut(s) 51
BstV1I GCAGC 4 cut(s) 164, 1340, 1378, 1390
BstV2I GAAGAC 1 cut(s) 906
BsuI GTATCC 1 cut(s) 261
BsuRI GGCC 5 cut(s) 49, 915, 1095, 1114, 1380
BtgI CCRYGG 1 cut(s) 701
BtsCI GGATG 2 cut(s) 51, 483
BtsI GCAGTG 1 cut(s) 122
BtsIMutI CAGTG 4 cut(s) 122, 394, 1079, 1297
BveI ACCTGC 1 cut(s) 1358
Cac8I GCNNGC 2 cut(s) 617, 1401
CaiI CAGNNNCTG 1 cut(s) 523
CfoI GCGC 1 cut(s) 457
Cfr13I GGNCC 7 cut(s) 47, 48, 335, 914, 1112, 1347, 1379
CspCI CAANNNNNGTGG 2 cut(s) 835, 870
CviAII CATG 5 cut(s) 577, 702, 807, 1165, 1400
DdeI CTNAG 4 cut(s) 259, 730, 904, 1082
DpnI GATC 3 cut(s) 1078, 1158, 1365
DpnII GATC 3 cut(s) 1076, 1156, 1363
DrdI GACNNNNNNGTC 1 cut(s) 19
DseDI GACNNNNNNGTC 1 cut(s) 19
Eam1104I CTCTTC 3 cut(s) 431, 633, 1454
EarI CTCTTC 3 cut(s) 431, 633, 1454
Ecl136II GAGCTC 1 cut(s) 626
Eco130I CCWWGG 2 cut(s) 57, 701
Eco24I GRGCYC 2 cut(s) 51, 628
Eco32I GATATC 2 cut(s) 394, 1204
Eco47I GGWCC 2 cut(s) 335, 1347
Eco47III AGCGCT 1 cut(s) 456
Eco53kI GAGCTC 1 cut(s) 626
Eco57I CTGAAG 3 cut(s) 918, 1273, 1392
Eco91I GGTNACC 1 cut(s) 706
EcoICRI GAGCTC 1 cut(s) 626
EcoNI CCTNNNNNAGG 1 cut(s) 1365
EcoO109I RGGNCCY 1 cut(s) 1347
EcoO65I GGTNACC 1 cut(s) 706
EcoRI GAATTC 1 cut(s) 373
EcoRII CCWGG 5 cut(s) 559, 775, 1011, 1072, 1095
EcoRV GATATC 2 cut(s) 394, 1204
EcoT14I CCWWGG 2 cut(s) 57, 701
EcoT22I ATGCAT 2 cut(s) 40, 469
EcoT38I GRGCYC 2 cut(s) 51, 628
ErhI CCWWGG 2 cut(s) 57, 701
FaeI CATG 5 cut(s) 580, 705, 810, 1168, 1403
FaqI GGGAC 2 cut(s) 237, 1360
FatI CATG 5 cut(s) 576, 701, 806, 1164, 1399
FbaI TGATCA 1 cut(s) 1363
Fnu4HI GCNGC 4 cut(s) 178, 1354, 1392, 1404
FokI GGATG 2 cut(s) 38, 470
FriOI GRGCYC 2 cut(s) 51, 628
Fsp4HI GCNGC 4 cut(s) 178, 1354, 1392, 1404
FspBI CTAG 4 cut(s) 633, 860, 1184, 1514
GlaI GCGC 1 cut(s) 456
GluI GCNGC 4 cut(s) 178, 1354, 1392, 1404
GsaI CCCAGC 1 cut(s) 920
GsuI CTGGAG 1 cut(s) 1056
HaeII RGCGCY 1 cut(s) 458
HaeIII GGCC 5 cut(s) 49, 915, 1095, 1114, 1380
HhaI GCGC 1 cut(s) 457
Hin1II CATG 5 cut(s) 580, 705, 810, 1168, 1403
Hin6I GCGC 1 cut(s) 455
HinP1I GCGC 1 cut(s) 455
HincII GTYRAC 1 cut(s) 554
HindII GTYRAC 1 cut(s) 554
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 4 cut(s) 183, 384, 902, 988
HphI GGTGA 2 cut(s) 203, 748
Hpy166II GTNNAC 4 cut(s) 515, 554, 739, 857
Hpy188I TCNGA 6 cut(s) 247, 493, 943, 993, 1306, 1411
Hpy188III TCNNGA 8 cut(s) 117, 131, 261, 416, 687, 1054, 1103, 1316
Hpy8I GTNNAC 4 cut(s) 515, 554, 739, 857
HpyAV CCTTC 7 cut(s) 210, 258, 265, 498, 800, 1225, 1297
HpyCH4III ACNGT 7 cut(s) 251, 758, 851, 1123, 1147, 1426, 1450
HpyCH4IV ACGT 1 cut(s) 923
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 1174, 1400
HpyF3I CTNAG 4 cut(s) 259, 730, 904, 1082
HpySE526I ACGT 1 cut(s) 923
Hsp92II CATG 5 cut(s) 580, 705, 810, 1168, 1403
HspAI GCGC 1 cut(s) 455
Ksp22I TGATCA 1 cut(s) 1363
Kzo9I GATC 3 cut(s) 1076, 1156, 1363
LguI GCTCTTC 3 cut(s) 431, 633, 1454
LmnI GCTCC 3 cut(s) 61, 413, 623
Lsp1109I GCAGC 4 cut(s) 164, 1340, 1378, 1390
LweI GCATC 2 cut(s) 251, 492
MaeI CTAG 4 cut(s) 633, 860, 1184, 1514
MaeII ACGT 1 cut(s) 923
MaeIII GTNAC 3 cut(s) 706, 931, 1036
MalI GATC 3 cut(s) 1078, 1158, 1365
MboI GATC 3 cut(s) 1076, 1156, 1363
MboII GAAGA 6 cut(s) 448, 620, 644, 764, 911, 1471
MfeI CAATTG 1 cut(s) 24
MhlI GDGCHC 2 cut(s) 51, 628
MlyI GAGTC 2 cut(s) 177, 896
MmeI TCCRAC 1 cut(s) 1477
Mph1103I ATGCAT 2 cut(s) 40, 469
MroXI GAANNNNTTC 2 cut(s) 743, 1286
MseI TTAA 6 cut(s) 83, 470, 545, 782, 1268, 1296
MspA1I CMGCKG 2 cut(s) 177, 724
MspR9I CCNGG 5 cut(s) 561, 777, 1013, 1074, 1097
MunI CAATTG 1 cut(s) 24
Mva1269I GAATGC 1 cut(s) 38
MvaI CCWGG 5 cut(s) 561, 777, 1013, 1074, 1097
MwoI GCNNNNNNNGC 3 cut(s) 35, 1174, 1400
NcoI CCATGG 1 cut(s) 701
NdeII GATC 3 cut(s) 1076, 1156, 1363
NlaIII CATG 5 cut(s) 580, 705, 810, 1168, 1403
NlaIV GGNNCC 4 cut(s) 49, 1220, 1348, 1491
NmuCI GTSAC 1 cut(s) 1036
NsiI ATGCAT 2 cut(s) 40, 469
NspI RCATGY 1 cut(s) 1403
PaeI GCATGC 1 cut(s) 1403
PciSI GCTCTTC 3 cut(s) 431, 633, 1454
PctI GAATGC 1 cut(s) 38
PdmI GAANNNNTTC 2 cut(s) 743, 1286
PfeI GAWTC 2 cut(s) 384, 988
PfoI TCCNGGA 2 cut(s) 775, 1072
PkrI GCNGC 4 cut(s) 179, 1355, 1393, 1405
PleI GAGTC 2 cut(s) 177, 896
PpsI GAGTC 2 cut(s) 177, 896
PpuMI RGGWCCY 1 cut(s) 1347
PshBI ATTAAT 1 cut(s) 470
PsiI TTATAA 1 cut(s) 1520
Psp124BI GAGCTC 1 cut(s) 628
Psp1406I AACGTT 1 cut(s) 923
Psp5II RGGWCCY 1 cut(s) 1347
Psp6I CCWGG 5 cut(s) 559, 775, 1011, 1072, 1095
PspEI GGTNACC 1 cut(s) 706
PspFI CCCAGC 1 cut(s) 916
PspGI CCWGG 5 cut(s) 559, 775, 1011, 1072, 1095
PspN4I GGNNCC 4 cut(s) 49, 1220, 1348, 1491
PspOMI GGGCCC 1 cut(s) 47
PspPI GGNCC 7 cut(s) 47, 48, 335, 914, 1112, 1347, 1379
PspPPI RGGWCCY 1 cut(s) 1347
PstNI CAGNNNCTG 1 cut(s) 523
PvuII CAGCTG 2 cut(s) 177, 724
SacI GAGCTC 1 cut(s) 628
SapI GCTCTTC 3 cut(s) 431, 633, 1454
SaqAI TTAA 6 cut(s) 83, 470, 545, 782, 1268, 1296
SatI GCNGC 4 cut(s) 178, 1354, 1392, 1404
Sau3AI GATC 3 cut(s) 1076, 1156, 1363
Sau96I GGNCC 7 cut(s) 47, 48, 335, 914, 1112, 1347, 1379
SchI GAGTC 2 cut(s) 177, 896
ScrFI CCNGG 5 cut(s) 561, 777, 1013, 1074, 1097
SduI GDGCHC 2 cut(s) 51, 628
SfaNI GCATC 2 cut(s) 251, 492
SfcI CTRYAG 1 cut(s) 1449
SinI GGWCC 2 cut(s) 335, 1347
SmlI CTYRAG 3 cut(s) 74, 1060, 1103
SmoI CTYRAG 3 cut(s) 74, 1060, 1103
SphI GCATGC 1 cut(s) 1403
SsiI CCGC 2 cut(s) 180, 220
SspMI CTAG 4 cut(s) 633, 860, 1184, 1514
SstI GAGCTC 1 cut(s) 628
StyD4I CCNGG 5 cut(s) 559, 775, 1011, 1072, 1095
StyI CCWWGG 2 cut(s) 57, 701
TaaI ACNGT 7 cut(s) 251, 758, 851, 1123, 1147, 1426, 1450
TaiI ACGT 1 cut(s) 926
TaqI TCGA 1 cut(s) 1152
TfiI GAWTC 2 cut(s) 384, 988
Tru1I TTAA 6 cut(s) 83, 470, 545, 782, 1268, 1296
Tru9I TTAA 6 cut(s) 83, 470, 545, 782, 1268, 1296
TscAI CASTG 4 cut(s) 129, 394, 1086, 1297
TseFI GTSAC 1 cut(s) 1036
TseI GCWGC 4 cut(s) 177, 1353, 1391, 1403
Tsp45I GTSAC 1 cut(s) 1036
TspDTI ATGAA 4 cut(s) 268, 412, 1313, 1472
TspRI CASTG 4 cut(s) 129, 394, 1086, 1297
VpaK11BI GGWCC 2 cut(s) 335, 1347
VspI ATTAAT 1 cut(s) 470
XagI CCTNNNNNAGG 1 cut(s) 1365
XapI RAATTY 6 cut(s) 195, 373, 430, 799, 836, 1320
XceI RCATGY 1 cut(s) 1403
XmnI GAANNNNTTC 2 cut(s) 743, 1286
XspI CTAG 4 cut(s) 633, 860, 1184, 1514
Zsp2I ATGCAT 2 cut(s) 40, 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.