Rmu_sc0024156.1_g000001
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024156.1
Physical Location & Seq
Reverse (-)
568 .. 2553
1986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024156.1_g000001.1.cds

Sequence Viewer

Length: 1587 bp
ctgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccactgggtaccggaggctcaaatttttccaccccatcgggtatcagagccaagctctctctctctaccccattgggtactggaggctcaaattctctaccccatcgggtatcagagcttgctccgctctccaccccatccggtactgagattgccactatatctgctgtgcaacacaataacctggtaaagttgtacggattctgcactgagggagttaaaaggcttcttgtctatgagtatctggagaacaacagtcttgatcaagcattatttggagagagatgtttaaatcttgattggtcaacacgttttaatatatgcttgggcatagctagaggtttaacttatcttcatgaagaatcaagggttcgaattgtacacagagatgtgaaggccagtaatattctgcttgacactaatctcatccccaagatatcggattttggtttggctaagctttttgatgagaaaaagacccacataagtacccgtgttgcgggaacaattgggtatcttgcaccggaatatgccatgcgtggacaccttacagagaagactgatgtctttgcctttggtgttctggctcttgaaattgttagtggtaggccaaattctgatccgagtttgggtgaagaaatgacttatcttctcgaatgggcttggcaattgcatgaaaacagacgggcagttgaactagtggactctagattatctgaattcaatgaggaagaagcacaacgaataatcaaaataggacttttgtgcactcaaacatcgccaatgctacgaccatccatgtcccgtgtagtgggaatgctttcaggagatatggaagtgacaacagtaacttcaaagcccggttacttgactgactggaaatttgatgatttaactacagtcaccagcctaaccgaactggacggtgtaagcattgtcaccaacatgagtgatatatatgacgactag

Protein Analysis

528

Amino Acids

55.51

Weight (kDa)

9.24

Isoelectric Point (pI)

21.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 745
AciI CCGC 2 cut(s) 743, 1118
AclWI GGATC 1 cut(s) 1232
AfiI CCNNNNNNNGG 3 cut(s) 1117, 1247, 1429
AflIII ACRYGT 1 cut(s) 926
AgsI TTSAA 4 cut(s) 1211, 1313, 1342, 1473
AhlI ACTAGT 1 cut(s) 1315
AjnI CCWGG 1 cut(s) 801
Alw21I GWGCWC 1 cut(s) 1388
Alw44I GTGCAC 1 cut(s) 1384
AlwI GGATC 1 cut(s) 1232
AoxI GGCC 2 cut(s) 1014, 1226
ApaLI GTGCAC 1 cut(s) 1384
ArsI GACNNNNNNTTYG 2 cut(s) 1484, 1516
Asp700I GAANNNNTTC 1 cut(s) 1438
AsuC2I CCSGG 1 cut(s) 1479
AsuHPI GGTGA 3 cut(s) 1262, 1513, 1549
AsuII TTCGAA 1 cut(s) 991
BaeGI GKGCMC 1 cut(s) 1388
BaeI ACNNNNGTAYC 2 cut(s) 1090, 1123
BbsI GAAGAC 1 cut(s) 1181
Bbv12I GWGCWC 1 cut(s) 1388
BciT130I CCWGG 1 cut(s) 803
BclI TGATCA 1 cut(s) 880
BcnI CCSGG 1 cut(s) 1479
BcuI ACTAGT 1 cut(s) 1315
BfaI CTAG 4 cut(s) 954, 1316, 1326, 1585
BfmI CTRYAG 1 cut(s) 1515
BlpI GCTNAGC 1 cut(s) 1074
Bme1390I CCNGG 2 cut(s) 803, 1479
BmrFI CCNGG 2 cut(s) 803, 1479
BmrI ACTGGG 9 cut(s) 80, 149, 218, 287, 356, 425, 494, 563, 632
BmuI ACTGGG 9 cut(s) 80, 149, 218, 287, 356, 425, 494, 563, 632
BoxI GACNNNNGTC 1 cut(s) 1181
BpiI GAAGAC 1 cut(s) 1181
BpmI CTGGAG 2 cut(s) 720, 884
Bpu1102I GCTNAGC 1 cut(s) 1074
Bpu14I TTCGAA 1 cut(s) 991
BpuMI CCSGG 1 cut(s) 1479
Bsc4I CCNNNNNNNGG 3 cut(s) 1117, 1247, 1429
BseBI CCWGG 1 cut(s) 803
BseGI GGATG 3 cut(s) 755, 1044, 1412
BseLI CCNNNNNNNGG 3 cut(s) 1117, 1247, 1429
BseMII CTCAG 2 cut(s) 756, 819
BseSI GKGCMC 1 cut(s) 1388
BsgI GTGCAG 1 cut(s) 808
BshFI GGCC 2 cut(s) 1016, 1228
BsiHKAI GWGCWC 1 cut(s) 1388
BslFI GGGAC 1 cut(s) 1405
BslI CCNNNNNNNGG 3 cut(s) 1117, 1247, 1429
BsmFI GGGAC 1 cut(s) 1405
BsmI GAATGC 1 cut(s) 1440
BsnI GGCC 2 cut(s) 1016, 1228
Bsp119I TTCGAA 1 cut(s) 991
Bsp1286I GDGCHC 1 cut(s) 1388
Bsp1407I TGTACA 1 cut(s) 997
Bsp143I GATC 2 cut(s) 880, 1237
Bsp1720I GCTNAGC 1 cut(s) 1074
BspACI CCGC 2 cut(s) 743, 1118
BspANI GGCC 2 cut(s) 1016, 1228
BspCNI CTCAG 2 cut(s) 757, 820
BspHI TCATGA 1 cut(s) 973
BspPI GGATC 1 cut(s) 1232
BspT104I TTCGAA 1 cut(s) 991
BsrBI CCGCTC 1 cut(s) 745
BsrGI TGTACA 1 cut(s) 997
BssMI GATC 2 cut(s) 880, 1237
Bst2UI CCWGG 1 cut(s) 803
Bst4CI ACNGT 4 cut(s) 875, 1465, 1519, 1544
BstAUI TGTACA 1 cut(s) 997
BstBI TTCGAA 1 cut(s) 991
BstC8I GCNNGC 1 cut(s) 738
BstDEI CTNAG 3 cut(s) 765, 828, 1074
BstF5I GGATG 3 cut(s) 755, 1044, 1412
BstKTI GATC 2 cut(s) 883, 1240
BstMBI GATC 2 cut(s) 880, 1237
BstMWI GCNNNNNNNGC 1 cut(s) 742
BstNI CCWGG 1 cut(s) 803
BstPAI GACNNNNGTC 1 cut(s) 1181
BstSCI CCNGG 2 cut(s) 801, 1477
BstSFI CTRYAG 1 cut(s) 1515
BstSLI GKGCMC 1 cut(s) 1388
BstV2I GAAGAC 1 cut(s) 1181
BsuRI GGCC 2 cut(s) 1016, 1228
BtgZI GCGATG 1 cut(s) 1380
BtsCI GGATG 3 cut(s) 755, 1044, 1412
Cac8I GCNNGC 1 cut(s) 738
CciI TCATGA 1 cut(s) 973
CsiI ACCWGGT 1 cut(s) 801
CviAII CATG 5 cut(s) 974, 1153, 1292, 1417, 1564
DdeI CTNAG 3 cut(s) 765, 828, 1074
DpnI GATC 2 cut(s) 882, 1239
DpnII GATC 2 cut(s) 880, 1237
DraI TTTAAA 1 cut(s) 909
Eco32I GATATC 1 cut(s) 1056
EcoRI GAATTC 1 cut(s) 1337
EcoRII CCWGG 1 cut(s) 801
EcoRV GATATC 1 cut(s) 1056
FaeI CATG 5 cut(s) 977, 1156, 1295, 1420, 1567
FaqI GGGAC 1 cut(s) 1405
FatI CATG 5 cut(s) 973, 1152, 1291, 1416, 1563
FauI CCCGC 1 cut(s) 1111
FbaI TGATCA 1 cut(s) 880
FokI GGATG 3 cut(s) 742, 1031, 1399
FspBI CTAG 4 cut(s) 954, 1316, 1326, 1585
GsuI CTGGAG 2 cut(s) 720, 884
HaeIII GGCC 2 cut(s) 1016, 1228
Hin1II CATG 5 cut(s) 977, 1156, 1295, 1420, 1567
HincII GTYRAC 1 cut(s) 924
HindII GTYRAC 1 cut(s) 924
HindIII AAGCTT 1 cut(s) 1076
HinfI GANTC 3 cut(s) 819, 980, 1322
HphI GGTGA 3 cut(s) 1262, 1513, 1549
Hpy166II GTNNAC 5 cut(s) 924, 1000, 1160, 1321, 1386
Hpy188III TCNNGA 8 cut(s) 863, 878, 914, 974, 1208, 1271, 1326, 1443
Hpy8I GTNNAC 5 cut(s) 924, 1000, 1160, 1321, 1386
HpyAV CCTTC 1 cut(s) 1006
HpyCH4III ACNGT 4 cut(s) 875, 1465, 1519, 1544
HpyCH4IV ACGT 1 cut(s) 928
HpyCH4V TGCA 5 cut(s) 790, 825, 1139, 1291, 1386
HpyF10VI GCNNNNNNNGC 1 cut(s) 742
HpyF3I CTNAG 3 cut(s) 765, 828, 1074
HpySE526I ACGT 1 cut(s) 928
Hsp92II CATG 5 cut(s) 977, 1156, 1295, 1420, 1567
Ksp22I TGATCA 1 cut(s) 880
Kzo9I GATC 2 cut(s) 880, 1237
LmnI GCTCC 1 cut(s) 745
MabI ACCWGGT 1 cut(s) 801
MaeI CTAG 4 cut(s) 954, 1316, 1326, 1585
MaeII ACGT 1 cut(s) 928
MaeIII GTNAC 5 cut(s) 1456, 1465, 1481, 1519, 1555
MalI GATC 2 cut(s) 882, 1239
MbiI CCGCTC 1 cut(s) 745
MboI GATC 2 cut(s) 880, 1237
MboII GAAGA 6 cut(s) 962, 989, 1186, 1259, 1265, 1361
MfeI CAATTG 2 cut(s) 1125, 1286
MhlI GDGCHC 1 cut(s) 1388
MlyI GAGTC 1 cut(s) 1316
MroXI GAANNNNTTC 1 cut(s) 1438
MseI TTAA 5 cut(s) 837, 908, 933, 962, 1511
MslI CAYNNNNRTG 2 cut(s) 1005, 1562
MspR9I CCNGG 2 cut(s) 803, 1479
MunI CAATTG 2 cut(s) 1125, 1286
Mva1269I GAATGC 1 cut(s) 1440
MvaI CCWGG 1 cut(s) 803
MwoI GCNNNNNNNGC 1 cut(s) 742
NciI CCSGG 1 cut(s) 1479
NdeII GATC 2 cut(s) 880, 1237
NlaIII CATG 5 cut(s) 977, 1156, 1295, 1420, 1567
NmuCI GTSAC 3 cut(s) 1456, 1519, 1555
NspV TTCGAA 1 cut(s) 991
PagI TCATGA 1 cut(s) 973
PctI GAATGC 1 cut(s) 1440
PdmI GAANNNNTTC 1 cut(s) 1438
PfeI GAWTC 2 cut(s) 819, 980
PleI GAGTC 1 cut(s) 1316
PpsI GAGTC 1 cut(s) 1316
PshAI GACNNNNGTC 1 cut(s) 1181
Psp6I CCWGG 1 cut(s) 801
PspGI CCWGG 1 cut(s) 801
RseI CAYNNNNRTG 2 cut(s) 1005, 1562
SaqAI TTAA 5 cut(s) 837, 908, 933, 962, 1511
Sau3AI GATC 2 cut(s) 880, 1237
SchI GAGTC 1 cut(s) 1316
ScrFI CCNGG 2 cut(s) 803, 1479
SduI GDGCHC 1 cut(s) 1388
SexAI ACCWGGT 1 cut(s) 801
SfcI CTRYAG 1 cut(s) 1515
SfuI TTCGAA 1 cut(s) 991
SmiMI CAYNNNNRTG 2 cut(s) 1005, 1562
SpeI ACTAGT 1 cut(s) 1315
SsiI CCGC 2 cut(s) 743, 1118
SspI AATATT 1 cut(s) 1024
SspMI CTAG 4 cut(s) 954, 1316, 1326, 1585
StyD4I CCNGG 2 cut(s) 801, 1477
TaaI ACNGT 4 cut(s) 875, 1465, 1519, 1544
TaiI ACGT 1 cut(s) 931
TaqI TCGA 2 cut(s) 991, 1272
TatI WGTACW 1 cut(s) 997
TfiI GAWTC 2 cut(s) 819, 980
Tru1I TTAA 5 cut(s) 837, 908, 933, 962, 1511
Tru9I TTAA 5 cut(s) 837, 908, 933, 962, 1511
TseFI GTSAC 3 cut(s) 1456, 1519, 1555
Tsp45I GTSAC 3 cut(s) 1456, 1519, 1555
TspDTI ATGAA 3 cut(s) 962, 990, 1308
TspGWI ACGGA 1 cut(s) 831
VneI GTGCAC 1 cut(s) 1384
XbaI TCTAGA 1 cut(s) 1325
XmnI GAANNNNTTC 1 cut(s) 1438
XspI CTAG 4 cut(s) 954, 1316, 1326, 1585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.