Rmu_sc0003020.1_g000001
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003020.1
Physical Location & Seq
Forward (+)
1 .. 923
923 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003020.1_g000001.1.cds

Sequence Viewer

Length: 616 bp
atcagattttggtttggccaagctttatgacaataaaatgacccacataagtaccggggttgcgggaacaattgggtatcttgcaccggaatatgccatgcgtggacaccttacagaaaagaccgatgtgtttgcatttggtgttgtagctctagagattgtcagtggtaggccaaattctgacccgagtttggaagaagataagatgtatcttctggaatgggcttggaacttgcatgagaacaaccgtgaagtcgaactagtggactacagattatccgaattcaatggggaagaagcaaaaagagtaatgaagataggacttttgtgcactcaaacatcaccaatgctgcgaccgacaatgtccggtgttgtgggaatgcttacaggagctattgaagtgacaacagtaacttcaaagcccggttacttgaccgactggaaattcaatgatgcaagtagtgccagcaacataacacttggtatgtcgactcaaggaactaattctagcgtttacaactcatcggctagtacaagcatagtaggggatgcaaggcaaacacctacaaatgacactcatgccattcttcacaatactgttaatgatggtcggtga

Protein Analysis

204

Amino Acids

22.23

Weight (kDa)

5.06

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 489
AciI CCGC 1 cut(s) 63
AcoI YGGCCR 1 cut(s) 16
AcsI RAATTY 3 cut(s) 176, 282, 444
AfaI GTAC 2 cut(s) 53, 533
AfiI CCNNNNNNNGG 1 cut(s) 191
AgsI TTSAA 4 cut(s) 287, 399, 418, 449
AhlI ACTAGT 1 cut(s) 260
AluBI AGCT 3 cut(s) 23, 150, 393
AluI AGCT 3 cut(s) 23, 150, 393
Alw21I GWGCWC 1 cut(s) 333
Alw44I GTGCAC 1 cut(s) 329
Ama87I CYCGRG 1 cut(s) 185
AoxI GGCC 2 cut(s) 16, 171
ApaLI GTGCAC 1 cut(s) 329
ApeKI GCWGC 1 cut(s) 350
ApoI RAATTY 3 cut(s) 176, 282, 444
Asp700I GAANNNNTTC 1 cut(s) 503
AsuC2I CCSGG 2 cut(s) 56, 424
AsuHPI GGTGA 1 cut(s) 334
AvaI CYCGRG 1 cut(s) 185
BaeGI GKGCMC 1 cut(s) 333
BaeI ACNNNNGTAYC 2 cut(s) 35, 68
BalI TGGCCA 1 cut(s) 18
Bbv12I GWGCWC 1 cut(s) 333
BbvI GCAGC 1 cut(s) 337
BccI CCATC 1 cut(s) 600
BcgI CGANNNNNNTGC 2 cut(s) 114, 148
BcnI CCSGG 2 cut(s) 56, 424
BcuI ACTAGT 1 cut(s) 260
BfaI CTAG 4 cut(s) 153, 261, 508, 529
BfmI CTRYAG 1 cut(s) 269
BisI GCNGC 1 cut(s) 351
BlsI GCNGC 1 cut(s) 352
Bme1390I CCNGG 2 cut(s) 56, 424
BmeT110I CYCGRG 1 cut(s) 185
BmrFI CCNGG 2 cut(s) 56, 424
BmsI GCATC 2 cut(s) 443, 539
BpuEI CTTGAG 1 cut(s) 478
BpuMI CCSGG 2 cut(s) 56, 424
BsaJI CCNNGG 1 cut(s) 55
BsaWI WCCGGW 2 cut(s) 86, 366
Bsc4I CCNNNNNNNGG 1 cut(s) 191
Bse1I ACTGG 1 cut(s) 444
BseDI CCNNGG 1 cut(s) 55
BseGI GGATG 1 cut(s) 554
BseLI CCNNNNNNNGG 1 cut(s) 191
BseNI ACTGG 1 cut(s) 444
BseSI GKGCMC 1 cut(s) 333
BseXI GCAGC 1 cut(s) 337
Bsh1285I CGRYCG 1 cut(s) 357
BshFI GGCC 2 cut(s) 18, 173
BsiEI CGRYCG 1 cut(s) 357
BsiHKAI GWGCWC 1 cut(s) 333
BsiHKCI CYCGRG 1 cut(s) 185
BsiSI CCGG 4 cut(s) 55, 87, 367, 424
BslI CCNNNNNNNGG 1 cut(s) 191
BsmI GAATGC 1 cut(s) 385
BsnI GGCC 2 cut(s) 18, 173
BsoBI CYCGRG 1 cut(s) 185
Bsp1286I GDGCHC 1 cut(s) 333
BspACI CCGC 1 cut(s) 63
BspANI GGCC 2 cut(s) 18, 173
BsrI ACTGG 1 cut(s) 444
BssECI CCNNGG 1 cut(s) 55
Bst4CI ACNGT 3 cut(s) 249, 410, 599
BstAPI GCANNNNNTGC 1 cut(s) 462
BstC8I GCNNGC 1 cut(s) 467
BstF5I GGATG 1 cut(s) 554
BstMCI CGRYCG 1 cut(s) 357
BstMWI GCNNNNNNNGC 1 cut(s) 462
BstSCI CCNGG 2 cut(s) 54, 422
BstSFI CTRYAG 1 cut(s) 269
BstSLI GKGCMC 1 cut(s) 333
BstV1I GCAGC 1 cut(s) 337
BsuRI GGCC 2 cut(s) 18, 173
BtsCI GGATG 1 cut(s) 554
BtsIMutI CAGTG 1 cut(s) 170
Cac8I GCNNGC 1 cut(s) 467
Csp6I GTAC 2 cut(s) 52, 532
CviAII CATG 3 cut(s) 98, 237, 579
CviJI RGCY 8 cut(s) 18, 23, 150, 173, 225, 393, 422, 528
CviKI_1 RGCY 8 cut(s) 18, 23, 150, 173, 225, 393, 422, 528
CviQI GTAC 2 cut(s) 52, 532
EaeI YGGCCR 1 cut(s) 16
Eco88I CYCGRG 1 cut(s) 185
EcoRI GAATTC 1 cut(s) 282
FaeI CATG 3 cut(s) 101, 240, 582
FaiI YATR 9 cut(s) 28, 48, 94, 99, 238, 474, 486, 540, 580
FatI CATG 3 cut(s) 97, 236, 578
FauI CCCGC 1 cut(s) 56
FblI GTMKAC 1 cut(s) 489
Fnu4HI GCNGC 1 cut(s) 351
FokI GGATG 1 cut(s) 561
Fsp4HI GCNGC 1 cut(s) 351
FspBI CTAG 4 cut(s) 153, 261, 508, 529
GluI GCNGC 1 cut(s) 351
HaeIII GGCC 2 cut(s) 18, 173
HapII CCGG 4 cut(s) 55, 87, 367, 424
Hin1II CATG 3 cut(s) 101, 240, 582
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HindIII AAGCTT 1 cut(s) 21
HinfI GANTC 1 cut(s) 491
HpaII CCGG 4 cut(s) 55, 87, 367, 424
HphI GGTGA 1 cut(s) 334
Hpy166II GTNNAC 5 cut(s) 105, 266, 331, 490, 515
Hpy188I TCNGA 3 cut(s) 5, 182, 281
Hpy188III TCNNGA 2 cut(s) 153, 216
Hpy8I GTNNAC 5 cut(s) 105, 266, 331, 490, 515
HpyCH4III ACNGT 3 cut(s) 249, 410, 599
HpyCH4V TGCA 6 cut(s) 84, 135, 236, 331, 456, 552
HpyF10VI GCNNNNNNNGC 1 cut(s) 462
Hsp92II CATG 3 cut(s) 101, 240, 582
LmnI GCTCC 1 cut(s) 390
LpnPI CCDG 8 cut(s) 68, 100, 201, 373, 380, 425, 437, 479
Lsp1109I GCAGC 1 cut(s) 337
LweI GCATC 2 cut(s) 443, 539
MaeI CTAG 4 cut(s) 153, 261, 508, 529
MaeIII GTNAC 3 cut(s) 401, 410, 426
MboII GAAGA 6 cut(s) 204, 207, 210, 306, 326, 579
MfeI CAATTG 1 cut(s) 70
MhlI GDGCHC 1 cut(s) 333
MlsI TGGCCA 1 cut(s) 18
MluCI AATT 5 cut(s) 70, 176, 282, 444, 503
MluNI TGGCCA 1 cut(s) 18
MlyI GAGTC 1 cut(s) 485
Mox20I TGGCCA 1 cut(s) 18
MroXI GAANNNNTTC 1 cut(s) 503
MscI TGGCCA 1 cut(s) 18
MseI TTAA 1 cut(s) 601
Msp20I TGGCCA 1 cut(s) 18
MspI CCGG 4 cut(s) 55, 87, 367, 424
MspR9I CCNGG 2 cut(s) 56, 424
MunI CAATTG 1 cut(s) 70
Mva1269I GAATGC 1 cut(s) 385
MwoI GCNNNNNNNGC 1 cut(s) 462
NciI CCSGG 2 cut(s) 56, 424
NlaIII CATG 3 cut(s) 101, 240, 582
NmuCI GTSAC 1 cut(s) 401
PctI GAATGC 1 cut(s) 385
PdmI GAANNNNTTC 1 cut(s) 503
PflFI GACNNNGTC 1 cut(s) 362
PkrI GCNGC 1 cut(s) 352
PleI GAGTC 1 cut(s) 485
PpsI GAGTC 1 cut(s) 485
PsyI GACNNNGTC 1 cut(s) 362
RsaI GTAC 2 cut(s) 53, 533
RsaNI GTAC 2 cut(s) 52, 532
SalI GTCGAC 1 cut(s) 488
SaqAI TTAA 1 cut(s) 601
SatI GCNGC 1 cut(s) 351
SchI GAGTC 1 cut(s) 485
ScrFI CCNGG 2 cut(s) 56, 424
SduI GDGCHC 1 cut(s) 333
SetI ASST 5 cut(s) 25, 112, 152, 395, 566
SfaNI GCATC 2 cut(s) 443, 539
SfcI CTRYAG 1 cut(s) 269
SmlI CTYRAG 1 cut(s) 493
SmoI CTYRAG 1 cut(s) 493
SpeI ACTAGT 1 cut(s) 260
Sse9I AATT 5 cut(s) 70, 176, 282, 444, 503
SsiI CCGC 1 cut(s) 63
SspMI CTAG 4 cut(s) 153, 261, 508, 529
StyD4I CCNGG 2 cut(s) 54, 422
TaaI ACNGT 3 cut(s) 249, 410, 599
TaqI TCGA 2 cut(s) 256, 489
TaqII GACCGA 3 cut(s) 138, 371, 450
TasI AATT 5 cut(s) 70, 176, 282, 444, 503
TatI WGTACW 1 cut(s) 531
Tru1I TTAA 1 cut(s) 601
Tru9I TTAA 1 cut(s) 601
TscAI CASTG 1 cut(s) 170
TseFI GTSAC 1 cut(s) 401
TseI GCWGC 1 cut(s) 350
Tsp45I GTSAC 1 cut(s) 401
TspDTI ATGAA 1 cut(s) 327
TspRI CASTG 1 cut(s) 170
Tth111I GACNNNGTC 1 cut(s) 362
VneI GTGCAC 1 cut(s) 329
XapI RAATTY 3 cut(s) 176, 282, 444
XbaI TCTAGA 1 cut(s) 152
XmiI GTMKAC 1 cut(s) 489
XmnI GAANNNNTTC 1 cut(s) 503
XspI CTAG 4 cut(s) 153, 261, 508, 529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.