Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000088

Physical Location & Seq

Genomic Coordinates Forward (+)

14346635 .. 14354870

Gene Structure 8236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G012240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3132 bp

ATGAAGCAAGTAGCTACCTTCTCTTTCGGTAGAATATGTGATGACTACTTCTTCTTCTGTCTTATCTTCTTCCTGGGTTGCTTCTGGTTCCATGCTTCCACTGCCCAAAATGCTACTACGGACCCAACCGAAGTGGCGGCGTTGAACTCTATATTACTACAATGGGACGCGCCAGCGGTGCCTCTGTGGAACATCAGTGGAGAGCCATGCAGTGGATCGGCCATCAATGGCACCGCCTTCAAGGACGGCCTCAATAACCCAGCCATCACTTGCGACTGTAGTTTTGAAAGTAACACCACCTGCCATATCACTCAATTGAGAGTTTATGCTTTGGACAAAACAGGAGTGTTACCTGAAGAACTTGTGGCTTTGAAATATCTTACTTTTTTCAAAATCGATCAGAACTTTTTCACCGGTCCCCTACCAGCATGGATTGGCAATATGTCTGAGTTGACTACGTTGTCGATTGCCCACAATGACTTCTATGGACCCATCCCCAAGGAGCTTGGAAACCTTCAGAAACTAAATCTGCTGTCCTTTGGAATAAATAATTTCTCTGGAACACTGCCTCCAGAACTTGGTAATTTAGTCAATCTCGAAGAGCTTTACATAAACAGCTGTGGACTTGGTGGTGAAATTCCTTCAACATTTGTTAAGCTTAAAAAAATGCGAATCCTAGGGGCATCAGACAGTCCTTTCTCAGGAAAGATACCTGATTTCATAGGGAATTGGACAAAGTTAACCTCCTTGAGATTTGAAGGGAATTCTTTTGAAGGCCCAATACCAAGCAGTTTTTCTCAGTTGACCTCAATGAATTCTCTACGAATCAGTGATATCTATAATGTGAGCTCCTCTCTTGACTTCATAAAGAATTTGAAGAAATTGACTGATTTAGCTCTTCGAAATGCCTTAGTCACTGGCCGCATCCCTTCTGATATTAGAGAATATCAAAGTTTAAATATACTGGATTTGGGTTTCAACAATATAACAGGTCAACTCCCAAGTGACTTGTTCAACATGAATTCTCTCACATCCTTATTTCTTGGAAATAATAGTTTGTCTGGAGTTCTGCCTAGCCAAAAGAGTGATCGTCTTCAAACCATAGATTTATCTTATAACTATTTATCAGGAAGTCTTCCCCCATGGGTAACCACAATATCGCAACTGAACTTGGTGGTCAACAACTTCACTTTTAACGAAAGTTCAGAAATAATGTTTCCCGGATTGAATTGCCTTCAAAGAAATTTTCCTTGCAATAGATATCCCCCGCGCTATGCAAACTTCTCAATCAACTGTGGAGGACCAGACATGAAAGGAAGTGATGGCATATTATATGAGGCAGAAAACTCAACTCTTGGCCCAGCAACATATAATGTAACCAGTACAGAGAAATGGGCTGTTAGCAATGTGGGTTTGTTTGCTGAGAGGAAGAATCCAAGCTATTTGCTAACCTCCTTGGCACAGGTTACTGGGTCGGATGTGACCCCAGAGCTTTTCCAGACTGCAAGATTATCTGCAGGATCACTGAGATACTACGGCTTGGGTCTCCAGAATGGGCTTTATACAGTAAAATTACAATTTGCAGAAATGGTTTTTGATGATCGTGCATCACAAACTTGGAAAAGTTTAGGAAGGCGAGTATTTGATATCTATATTCAGGGGCATCTAGTAGTGAAGGACTTTGACATATCCAAGGAGGCAGATGGTGTTTTAAGAGTAGCAGCGAAAAACTTCAATGTAAACGTGTCGGACAATTATGTTGAAATTCATTTGTTCTGGGCTGGTAAGGGGACCTGTTGCATACCTTATCAAGGTGATTATGGTCCACTAATATCAACGGTCAATGCTGTTCCAGATTTTAAACCAACTGTTTCTGGGAATCCACCAACTACTCCAGGAAAGAAGAGCATGACAGGGGTGATTGTTGGCGTTGCAGTCTCTGTCGGAGTTGTGAGCTTGCTATTAATATTTGCAGTTTTATATTTGAGGAGAAAAATACCAGACAAAGATGACGATGAAGAACTTCAAGGATTAGACCCGCGACCAAATACATTCAGTTATAGTGAGTTAAAAGCTGCAACAGGAGATTTTAATCTTTCAAATAAACTAGGGGAGGGAGGATATGGCGCCGTTTACAAGGGCATACTTTCTGAAGCAAGGTTAGTGGCTGTGAAGCAACTTTCAGTAGCATCTCACCAAGGGAAGAGTCAATTTGCAGCAGAAATTGCTGCCATATCTGCAGTGCAACATCGCAATCTAGTGAAACTGTATGGATGCTGTATCGAAGGAAACCAGCGAATTTTGGTTTATGAATATCTTGAAAACAAGAGCCTTGATCAGGCACTTTTTGGAAACAACTTGCATCTTGATTGGCATACCAGATTCAATATCTTGTTGGGAACAGCAAGAGGACTTGCCTATCTTCATGAGGAGTCGAGGCCAAGGATTGTACATAGAGATGTCAAAGCCAGTAATATTTTGCTTGATGCAGACCTCTGCCCAAAAATATCAGATTTTGGACTGGCAAAGCTTTATGATGATGAGAAAACCCACATCAGCACCCGGGTTGCAGGGACAATAGGCTATTTGGCACCGGAGTATGCAATGCGGGGACATCTGACTGAAAAGGCTGATGTATTCGGTTTTGGAGTTGTCATTTTGGAGACTCTTAGTGGCAGACCAAACACTGACAATGACTTGGATGCCGGAGAGATTTATCTCCTTGATTGGGCATGGACTCTACATGAAAAAAATGAGCGTTTGGGGCTTGTGGATCTGAGACTGACCGACTTTGATGAAGAAGAAGCAAATAGATTGATAAGATTAGCTTTCCTGTGTACTCAGGCATCCCCATTGATGCGGCCATCTATGTCTCGTGTGGTGGCCATGCTTGCTGGAGATATTGAAGTAGGTAATGTTATGGCAAAGCCAAGTTATTTGACAGACTGGGATTTCAAAGATGTAACAGGAAGCTTCTTGATTGATGGTGATACCCCCTCAACTGGGATGACTCACCCCAACAATCAGTCTACTGGCATCACAACCGGTGCTAACACCGGAATTGACCTGATGCAGTCTCCTGTGAATTCTAATCATTCATTGCTCACTGGGATTATAGGAGAAGGAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

1043

Amino Acids

114.64

Weight (kDa)

5.31

Isoelectric Point (pI)

30.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	187 - 276	3.4e-07	Leucine-rich repeat region
LRR_14	PF23598	265 - 352	4.5e-06	Leucine-rich repeat region
Malectin	PF11721	428 - 612	9.2e-41	Malectin domain
PK_Tyr_Ser-Thr	PF07714	698 - 963	8.7e-45	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	698 - 901	5e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca	FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica	MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica	Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis	pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis	RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata	RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora	Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa	Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha	Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana	Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1116
AarI	CACCTGC	1 cut(s)	308
AasI	GACNNNNNNGTC	1 cut(s)	460
Acc36I	ACCTGC	1 cut(s)	308
AccB1I	GGYRCC	4 cut(s)	178, 230, 2126, 2590
AccB7I	CCANNNNNTGG	2 cut(s)	212, 578
AccI	GTMKAC	1 cut(s)	3029
AccII	CGCG	3 cut(s)	170, 1270, 2041
AciI	CCGC	8 cut(s)	137, 176, 234, 922, 1268, 2039, 2608, 2860
AclWI	GGATC	3 cut(s)	223, 1528, 2781
AcoI	YGGCCR	4 cut(s)	219, 919, 2861, 2883
AcsI	RAATTY	9 cut(s)	636, 763, 814, 871, 1021, 1243, 1764, 2298, 3085
AcuI	CTGAAG	3 cut(s)	375, 500, 2172
AcyI	GRCGYC	1 cut(s)	2127
AfaI	GTAC	3 cut(s)	1384, 2451, 2839
AfiI	CCNNNNNNNGG	8 cut(s)	212, 578, 701, 1811, 2338, 2728, 3002, 3003
AflIII	ACRYGT	1 cut(s)	1743
AgeI	ACCGGT	2 cut(s)	413, 3044
AjnI	CCWGG	2 cut(s)	72, 1894
AjuI	GAANNNNNNNTTGG	2 cut(s)	778, 810
AloI	GAACNNNNNNTCC	2 cut(s)	553, 585
Alw21I	GWGCWC	1 cut(s)	851
Alw26I	GTCTC	6 cut(s)	1550, 1942, 2657, 2773, 2877, 3081
AlwI	GGATC	3 cut(s)	223, 1528, 2781
AlwNI	CAGNNNCTG	1 cut(s)	1940
Ama87I	CYCGRG	1 cut(s)	2562
AoxI	GGCC	8 cut(s)	219, 247, 775, 919, 1357, 2438, 2861, 2883
ApeKI	GCWGC	4 cut(s)	1721, 2075, 2216, 2228
ApoI	RAATTY	9 cut(s)	636, 763, 814, 871, 1021, 1243, 1764, 2298, 3085
ArsI	GACNNNNNNTTYG	2 cut(s)	266, 298
AseI	ATTAAT	1 cut(s)	1964
AsiGI	ACCGGT	2 cut(s)	413, 3044
Asp700I	GAANNNNTTC	3 cut(s)	407, 1730, 2022
AspA2I	CCTAGG	1 cut(s)	676
AspLEI	GCGC	3 cut(s)	172, 1272, 2129
AspS9I	GGNCC	8 cut(s)	121, 416, 488, 776, 1301, 1358, 1791, 1823
AsuC2I	CCSGG	3 cut(s)	1221, 2563, 2564
AsuHPI	GGTGA	7 cut(s)	403, 644, 1826, 1930, 2186, 2999, 3005
AsuII	TTCGAA	1 cut(s)	901
AvaI	CYCGRG	1 cut(s)	2562
AvaII	GGWCC	6 cut(s)	121, 416, 488, 1301, 1791, 1823
AvrII	CCTAGG	1 cut(s)	676
BalI	TGGCCA	1 cut(s)	2885
BanI	GGYRCC	4 cut(s)	178, 230, 2126, 2590
BanII	GRGCYC	1 cut(s)	851
BarI	GAAGNNNNNNTAC	2 cut(s)	765, 797
BauI	CACGAG	1 cut(s)	2874
BbsI	GAAGAC	2 cut(s)	1085, 1127
Bbv12I	GWGCWC	1 cut(s)	851
BbvI	GCAGC	4 cut(s)	1733, 2062, 2215, 2228
BccI	CCATC	7 cut(s)	230, 272, 500, 1316, 1697, 2872, 2978
BceAI	ACGGC	3 cut(s)	262, 1552, 2114
BciT130I	CCWGG	2 cut(s)	74, 1896
BclI	TGATCA	1 cut(s)	2335
BcnI	CCSGG	3 cut(s)	1221, 2563, 2564
BcoDI	GTCTC	6 cut(s)	1550, 1942, 2657, 2773, 2877, 3081
BfaI	CTAG	5 cut(s)	677, 1074, 1667, 2108, 2258
BfmI	CTRYAG	3 cut(s)	277, 1515, 2238
BfoI	RGCGCY	1 cut(s)	2130
BfuAI	ACCTGC	1 cut(s)	308
BisI	GCNGC	7 cut(s)	138, 922, 1722, 2076, 2217, 2229, 2861
BlnI	CCTAGG	1 cut(s)	676
BlsI	GCNGC	7 cut(s)	139, 923, 1723, 2077, 2218, 2230, 2862
Bme1390I	CCNGG	5 cut(s)	74, 1221, 1896, 2563, 2564
Bme18I	GGWCC	6 cut(s)	121, 416, 488, 1301, 1791, 1823
BmeT110I	CYCGRG	1 cut(s)	2562
BmgT120I	GGNCC	8 cut(s)	121, 416, 488, 776, 1301, 1358, 1791, 1823
BmiI	GGNNCC	9 cut(s)	89, 123, 180, 232, 418, 490, 1792, 2128, 2592
BmrFI	CCNGG	5 cut(s)	74, 1221, 1896, 2563, 2564
BmrI	ACTGGG	4 cut(s)	1479, 2956, 3012, 3117
BmuI	ACTGGG	4 cut(s)	1479, 2956, 3012, 3117
BpiI	GAAGAC	2 cut(s)	1085, 1127
BplI	GAGNNNNNCTC	2 cut(s)	838, 870
BpmI	CTGGAG	5 cut(s)	555, 1083, 1532, 1878, 2916
Bpu14I	TTCGAA	1 cut(s)	901
BpuEI	CTTGAG	1 cut(s)	769
BpuMI	CCSGG	3 cut(s)	1221, 2563, 2564
Bsa29I	ATCGAT	1 cut(s)	396
BsaBI	GATNNNNATC	1 cut(s)	2091
BsaHI	GRCGYC	1 cut(s)	2127
BsaI	GGTCTC	1 cut(s)	1550
BsaJI	CCNNGG	9 cut(s)	73, 498, 676, 1142, 1455, 1692, 2197, 2441, 2562
BsaWI	WCCGGW	4 cut(s)	413, 2593, 3044, 3056
BsaXI	ACNNNNNCTCC	2 cut(s)	553, 583
Bsc4I	CCNNNNNNNGG	8 cut(s)	212, 578, 701, 1811, 2338, 2728, 3002, 3003
Bse118I	RCCGGY	2 cut(s)	413, 3044
Bse3DI	GCAATG	3 cut(s)	1411, 2610, 3098
Bse8I	GATNNNNATC	1 cut(s)	2091
BseBI	CCWGG	2 cut(s)	74, 1896
BseCI	ATCGAT	1 cut(s)	396
BseDI	CCNNGG	9 cut(s)	73, 498, 676, 1142, 1455, 1692, 2197, 2441, 2562
BseGI	GGATG	8 cut(s)	492, 924, 1031, 1483, 2279, 2707, 2846, 3012
BseJI	GATNNNNATC	1 cut(s)	2091
BseLI	CCNNNNNNNGG	8 cut(s)	212, 578, 701, 1811, 2338, 2728, 3002, 3003
BseMI	GCAATG	3 cut(s)	1411, 2610, 3098
BseMII	CTCAG	7 cut(s)	438, 714, 812, 1413, 1517, 2768, 2855
BseRI	GAGGAG	3 cut(s)	841, 2002, 2444
BseXI	GCAGC	4 cut(s)	1733, 2062, 2215, 2228
BseYI	CCCAGC	2 cut(s)	259, 1360
Bsh1236I	CGCG	3 cut(s)	170, 1270, 2041
BshFI	GGCC	8 cut(s)	221, 249, 777, 921, 1359, 2440, 2863, 2885
BshNI	GGYRCC	4 cut(s)	178, 230, 2126, 2590
BshTI	ACCGGT	2 cut(s)	413, 3044
BshVI	ATCGAT	1 cut(s)	396
BsiHKAI	GWGCWC	1 cut(s)	851
BsiHKCI	CYCGRG	1 cut(s)	2562
BsiSI	CCGG	7 cut(s)	414, 1221, 2563, 2594, 2706, 3045, 3057
BslFI	GGGAC	5 cut(s)	179, 402, 1804, 2587, 2625
BslI	CCNNNNNNNGG	8 cut(s)	212, 578, 701, 1811, 2338, 2728, 3002, 3003
BsmAI	GTCTC	6 cut(s)	1550, 1942, 2657, 2773, 2877, 3081
BsmFI	GGGAC	5 cut(s)	179, 402, 1804, 2587, 2625
BsnI	GGCC	8 cut(s)	221, 249, 777, 921, 1359, 2440, 2863, 2885
Bso31I	GGTCTC	1 cut(s)	1550
BsoBI	CYCGRG	1 cut(s)	2562
Bsp119I	TTCGAA	1 cut(s)	901
Bsp1286I	GDGCHC	1 cut(s)	851
Bsp1407I	TGTACA	1 cut(s)	2449
Bsp143I	GATC	7 cut(s)	215, 397, 1087, 1520, 1600, 2335, 2773
Bsp19I	CCATGG	1 cut(s)	1142
BspACI	CCGC	8 cut(s)	137, 176, 234, 922, 1268, 2039, 2608, 2860
BspANI	GGCC	8 cut(s)	221, 249, 777, 921, 1359, 2440, 2863, 2885
BspCNI	CTCAG	7 cut(s)	439, 713, 811, 1414, 1518, 2769, 2854
BspDI	ATCGAT	1 cut(s)	396
BspFNI	CGCG	3 cut(s)	170, 1270, 2041
BspHI	TCATGA	1 cut(s)	2425
BspLI	GGNNCC	9 cut(s)	89, 123, 180, 232, 418, 490, 1792, 2128, 2592
BspMAI	CTGCAG	2 cut(s)	1519, 2242
BspMI	ACCTGC	1 cut(s)	308
BspPI	GGATC	3 cut(s)	223, 1528, 2781
BspQI	GCTCTTC	3 cut(s)	594, 903, 1898
BspT104I	TTCGAA	1 cut(s)	901
BspT107I	GGYRCC	4 cut(s)	178, 230, 2126, 2590
BspTNI	GGTCTC	1 cut(s)	1550
BsrDI	GCAATG	3 cut(s)	1411, 2610, 3098
BsrFI	RCCGGY	2 cut(s)	413, 3044
BsrGI	TGTACA	1 cut(s)	2449
BssAI	RCCGGY	2 cut(s)	413, 3044
BssECI	CCNNGG	9 cut(s)	73, 498, 676, 1142, 1455, 1692, 2197, 2441, 2562
BssMI	GATC	7 cut(s)	215, 397, 1087, 1520, 1600, 2335, 2773
BssNI	GRCGYC	1 cut(s)	2127
BssSI	CACGAG	1 cut(s)	2874
BssT1I	CCWWGG	7 cut(s)	498, 676, 1142, 1455, 1692, 2197, 2441
Bst2BI	CACGAG	1 cut(s)	2874
Bst2UI	CCWGG	2 cut(s)	74, 1896
Bst4CI	ACNGT	7 cut(s)	278, 692, 1295, 1567, 1840, 1870, 2268
Bst6I	CTCTTC	4 cut(s)	594, 903, 1898, 2198
BstACI	GRCGYC	1 cut(s)	2127
BstAPI	GCANNNNNTGC	1 cut(s)	2225
BstAUI	TGTACA	1 cut(s)	2449
BstBI	TTCGAA	1 cut(s)	901
BstC8I	GCNNGC	3 cut(s)	174, 1958, 2892
BstDEI	CTNAG	9 cut(s)	447, 700, 798, 910, 1422, 1526, 2669, 2777, 2841
BstDSI	CCRYGG	1 cut(s)	1142
BstEII	GGTNACC	1 cut(s)	1147
BstENI	CCTNNNNNAGG	3 cut(s)	699, 1809, 2336
BstF5I	GGATG	8 cut(s)	492, 924, 1031, 1483, 2279, 2707, 2846, 3012
BstFNI	CGCG	3 cut(s)	170, 1270, 2041
BstH2I	RGCGCY	1 cut(s)	2130
BstHHI	GCGC	3 cut(s)	172, 1272, 2129
BstKTI	GATC	7 cut(s)	218, 400, 1090, 1523, 1603, 2338, 2776
BstMAI	GTCTC	6 cut(s)	1550, 1942, 2657, 2773, 2877, 3081
BstMBI	GATC	7 cut(s)	215, 397, 1087, 1520, 1600, 2335, 2773
BstMWI	GCNNNNNNNGC	7 cut(s)	101, 110, 178, 2225, 2237, 2764, 2891
BstNI	CCWGG	2 cut(s)	74, 1896
BstPI	GGTNACC	1 cut(s)	1147
BstSCI	CCNGG	5 cut(s)	72, 1219, 1894, 2561, 2562
BstSFI	CTRYAG	3 cut(s)	277, 1515, 2238
BstUI	CGCG	3 cut(s)	170, 1270, 2041
BstV1I	GCAGC	4 cut(s)	1733, 2062, 2215, 2228
BstV2I	GAAGAC	2 cut(s)	1085, 1127
BstX2I	RGATCY	1 cut(s)	2773
BstYI	RGATCY	1 cut(s)	2773
Bsu15I	ATCGAT	1 cut(s)	396
BsuRI	GGCC	8 cut(s)	221, 249, 777, 921, 1359, 2440, 2863, 2885
BsuTUI	ATCGAT	1 cut(s)	396
BtgI	CCRYGG	1 cut(s)	1142
BtgZI	GCGATG	1 cut(s)	2234
BtsCI	GGATG	8 cut(s)	492, 924, 1031, 1483, 2279, 2707, 2846, 3012
BtsI	GCAGTG	4 cut(s)	99, 217, 563, 2247
BveI	ACCTGC	1 cut(s)	308
Cac8I	GCNNGC	3 cut(s)	174, 1958, 2892
CaiI	CAGNNNCTG	1 cut(s)	1940
CciI	TCATGA	1 cut(s)	2425
CfoI	GCGC	3 cut(s)	172, 1272, 2129
Cfr10I	RCCGGY	2 cut(s)	413, 3044
Cfr13I	GGNCC	8 cut(s)	121, 416, 488, 776, 1301, 1358, 1791, 1823
Cfr9I	CCCGGG	1 cut(s)	2562
ClaI	ATCGAT	1 cut(s)	396
CseI	GACGC	1 cut(s)	176
Csp6I	GTAC	3 cut(s)	1383, 2450, 2838
CspAI	ACCGGT	2 cut(s)	413, 3044
CspCI	CAANNNNNGTGG	4 cut(s)	114, 149, 2145, 2180
CviQI	GTAC	3 cut(s)	1383, 2450, 2838
DdeI	CTNAG	9 cut(s)	447, 700, 798, 910, 1422, 1526, 2669, 2777, 2841
DinI	GGCGCC	1 cut(s)	2128
DpnI	GATC	7 cut(s)	217, 399, 1089, 1522, 1602, 2337, 2775
DpnII	GATC	7 cut(s)	215, 397, 1087, 1520, 1600, 2335, 2773
DraI	TTTAAA	2 cut(s)	957, 1861
DrdI	GACNNNNNNGTC	1 cut(s)	460
DseDI	GACNNNNNNGTC	1 cut(s)	460
EaeI	YGGCCR	4 cut(s)	219, 919, 2861, 2883
Eam1104I	CTCTTC	4 cut(s)	594, 903, 1898, 2198
EarI	CTCTTC	4 cut(s)	594, 903, 1898, 2198
Ecl136II	GAGCTC	1 cut(s)	849
Eco130I	CCWWGG	7 cut(s)	498, 676, 1142, 1455, 1692, 2197, 2441
Eco24I	GRGCYC	1 cut(s)	851
Eco31I	GGTCTC	1 cut(s)	1550
Eco32I	GATATC	3 cut(s)	835, 1262, 1648
Eco47I	GGWCC	6 cut(s)	121, 416, 488, 1301, 1791, 1823
Eco53kI	GAGCTC	1 cut(s)	849
Eco57I	CTGAAG	3 cut(s)	375, 500, 2172
Eco88I	CYCGRG	1 cut(s)	2562
Eco91I	GGTNACC	1 cut(s)	1147
EcoICRI	GAGCTC	1 cut(s)	849
EcoNI	CCTNNNNNAGG	3 cut(s)	699, 1809, 2336
EcoO109I	RGGNCCY	1 cut(s)	1791
EcoO65I	GGTNACC	1 cut(s)	1147
EcoRI	GAATTC	4 cut(s)	763, 814, 1021, 3085
EcoRII	CCWGG	2 cut(s)	72, 1894
EcoRV	GATATC	3 cut(s)	835, 1262, 1648
EcoT14I	CCWWGG	7 cut(s)	498, 676, 1142, 1455, 1692, 2197, 2441
EcoT38I	GRGCYC	1 cut(s)	851
EgeI	GGCGCC	1 cut(s)	2128
EheI	GGCGCC	1 cut(s)	2128
ErhI	CCWWGG	7 cut(s)	498, 676, 1142, 1455, 1692, 2197, 2441
FalI	AAGNNNNNCTT	2 cut(s)	2812, 2844
FaqI	GGGAC	5 cut(s)	179, 402, 1804, 2587, 2625
FauI	CCCGC	3 cut(s)	1275, 2046, 2601
FbaI	TGATCA	1 cut(s)	2335
FblI	GTMKAC	1 cut(s)	3029
Fnu4HI	GCNGC	7 cut(s)	138, 922, 1722, 2076, 2217, 2229, 2861
FokI	GGATG	8 cut(s)	479, 911, 1018, 1490, 2286, 2714, 2833, 3019
FriOI	GRGCYC	1 cut(s)	851
Fsp4HI	GCNGC	7 cut(s)	138, 922, 1722, 2076, 2217, 2229, 2861
FspBI	CTAG	5 cut(s)	677, 1074, 1667, 2108, 2258
GlaI	GCGC	3 cut(s)	171, 1271, 2128
GluI	GCNGC	7 cut(s)	138, 922, 1722, 2076, 2217, 2229, 2861
GsaI	CCCAGC	2 cut(s)	263, 1364
GsuI	CTGGAG	5 cut(s)	555, 1083, 1532, 1878, 2916
HaeII	RGCGCY	1 cut(s)	2130
HaeIII	GGCC	8 cut(s)	221, 249, 777, 921, 1359, 2440, 2863, 2885
HapII	CCGG	7 cut(s)	414, 1221, 2563, 2594, 2706, 3045, 3057
HgaI	GACGC	1 cut(s)	176
HhaI	GCGC	3 cut(s)	172, 1272, 2129
Hin1I	GRCGYC	1 cut(s)	2127
Hin6I	GCGC	3 cut(s)	170, 1270, 2127
HinP1I	GCGC	3 cut(s)	170, 1270, 2127
HincII	GTYRAC	5 cut(s)	453, 741, 804, 995, 1180
HindII	GTYRAC	5 cut(s)	453, 741, 804, 995, 1180
HindIII	AAGCTT	3 cut(s)	656, 2528, 2971
HpaI	GTTAAC	1 cut(s)	741
HpaII	CCGG	7 cut(s)	414, 1221, 2563, 2594, 2706, 3045, 3057
HphI	GGTGA	7 cut(s)	403, 644, 1826, 1930, 2186, 2999, 3005
HpyCH4III	ACNGT	7 cut(s)	278, 692, 1295, 1567, 1840, 1870, 2268
HpyCH4IV	ACGT	2 cut(s)	458, 1743
HpyF10VI	GCNNNNNNNGC	7 cut(s)	101, 110, 178, 2225, 2237, 2764, 2891
HpyF3I	CTNAG	9 cut(s)	447, 700, 798, 910, 1422, 1526, 2669, 2777, 2841
HpySE526I	ACGT	2 cut(s)	458, 1743
Hsp92I	GRCGYC	1 cut(s)	2127
HspAI	GCGC	3 cut(s)	170, 1270, 2127
KasI	GGCGCC	1 cut(s)	2126
Ksp22I	TGATCA	1 cut(s)	2335
KspAI	GTTAAC	1 cut(s)	741
Kzo9I	GATC	7 cut(s)	215, 397, 1087, 1520, 1600, 2335, 2773
LguI	GCTCTTC	3 cut(s)	594, 903, 1898
LmnI	GCTCC	2 cut(s)	502, 854
Lsp1109I	GCAGC	4 cut(s)	1733, 2062, 2215, 2228
MaeI	CTAG	5 cut(s)	677, 1074, 1667, 2108, 2258
MaeII	ACGT	2 cut(s)	458, 1743
MaeIII	GTNAC	9 cut(s)	290, 348, 913, 1004, 1147, 1375, 1465, 1480, 2962
MalI	GATC	7 cut(s)	217, 399, 1089, 1522, 1602, 2337, 2775
MboI	GATC	7 cut(s)	215, 397, 1087, 1520, 1600, 2335, 2773
MfeI	CAATTG	1 cut(s)	314
MflI	RGATCY	1 cut(s)	2773
MhlI	GDGCHC	1 cut(s)	851
MlsI	TGGCCA	1 cut(s)	2885
MluNI	TGGCCA	1 cut(s)	2885
Mly113I	GGCGCC	1 cut(s)	2127
MlyI	GAGTC	5 cut(s)	2215, 2441, 2659, 2731, 3004
MmeI	TCCRAC	3 cut(s)	1455, 1728, 1924
Mox20I	TGGCCA	1 cut(s)	2885
MroXI	GAANNNNTTC	3 cut(s)	407, 1730, 2022
MscI	TGGCCA	1 cut(s)	2885
MslI	CAYNNNNRTG	1 cut(s)	2457
Msp20I	TGGCCA	1 cut(s)	2885
MspA1I	CMGCKG	2 cut(s)	176, 618
MspI	CCGG	7 cut(s)	414, 1221, 2563, 2594, 2706, 3045, 3057
MspR9I	CCNGG	5 cut(s)	74, 1221, 1896, 2563, 2564
MunI	CAATTG	1 cut(s)	314
MvaI	CCWGG	2 cut(s)	74, 1896
MvnI	CGCG	3 cut(s)	170, 1270, 2041
MwoI	GCNNNNNNNGC	7 cut(s)	101, 110, 178, 2225, 2237, 2764, 2891
NarI	GGCGCC	1 cut(s)	2127
NciI	CCSGG	3 cut(s)	1221, 2563, 2564
NcoI	CCATGG	1 cut(s)	1142
NdeII	GATC	7 cut(s)	215, 397, 1087, 1520, 1600, 2335, 2773
NlaIV	GGNNCC	9 cut(s)	89, 123, 180, 232, 418, 490, 1792, 2128, 2592
NmuCI	GTSAC	3 cut(s)	913, 1004, 1480
NspV	TTCGAA	1 cut(s)	901
PagI	TCATGA	1 cut(s)	2425
PaqCI	CACCTGC	1 cut(s)	308
PciSI	GCTCTTC	3 cut(s)	594, 903, 1898
PdmI	GAANNNNTTC	3 cut(s)	407, 1730, 2022
PfeI	GAWTC	5 cut(s)	672, 825, 1432, 1879, 2382
PflMI	CCANNNNNTGG	2 cut(s)	212, 578
PfoI	TCCNGGA	2 cut(s)	1219, 1894
PinAI	ACCGGT	2 cut(s)	413, 3044
PkrI	GCNGC	7 cut(s)	139, 923, 1723, 2077, 2218, 2230, 2862
PleI	GAGTC	5 cut(s)	2214, 2440, 2659, 2731, 3004
PluTI	GGCGCC	1 cut(s)	2130
PpsI	GAGTC	5 cut(s)	2214, 2440, 2659, 2731, 3004
PpuMI	RGGWCCY	1 cut(s)	1791
PshBI	ATTAAT	1 cut(s)	1964
PsiI	TTATAA	1 cut(s)	1116
Psp124BI	GAGCTC	1 cut(s)	851
Psp5II	RGGWCCY	1 cut(s)	1791
Psp6I	CCWGG	2 cut(s)	72, 1894
PspEI	GGTNACC	1 cut(s)	1147
PspFI	CCCAGC	2 cut(s)	259, 1360
PspGI	CCWGG	2 cut(s)	72, 1894
PspN4I	GGNNCC	9 cut(s)	89, 123, 180, 232, 418, 490, 1792, 2128, 2592
PspPI	GGNCC	8 cut(s)	121, 416, 488, 776, 1301, 1358, 1791, 1823
PspPPI	RGGWCCY	1 cut(s)	1791
PstI	CTGCAG	2 cut(s)	1519, 2242
PstNI	CAGNNNCTG	1 cut(s)	1940
PsuI	RGATCY	1 cut(s)	2773
PvuII	CAGCTG	1 cut(s)	618
RsaI	GTAC	3 cut(s)	1384, 2451, 2839
RsaNI	GTAC	3 cut(s)	1383, 2450, 2838
RseI	CAYNNNNRTG	1 cut(s)	2457
SacI	GAGCTC	1 cut(s)	851
SapI	GCTCTTC	3 cut(s)	594, 903, 1898
SatI	GCNGC	7 cut(s)	138, 922, 1722, 2076, 2217, 2229, 2861
Sau3AI	GATC	7 cut(s)	215, 397, 1087, 1520, 1600, 2335, 2773
Sau96I	GGNCC	8 cut(s)	121, 416, 488, 776, 1301, 1358, 1791, 1823
SchI	GAGTC	5 cut(s)	2215, 2441, 2659, 2731, 3004
ScrFI	CCNGG	5 cut(s)	74, 1221, 1896, 2563, 2564
SduI	GDGCHC	1 cut(s)	851
SfcI	CTRYAG	3 cut(s)	277, 1515, 2238
SfoI	GGCGCC	1 cut(s)	2128
SfuI	TTCGAA	1 cut(s)	901
SinI	GGWCC	6 cut(s)	121, 416, 488, 1301, 1791, 1823
SmaI	CCCGGG	1 cut(s)	2564
SmiMI	CAYNNNNRTG	1 cut(s)	2457
SmlI	CTYRAG	1 cut(s)	748
SmoI	CTYRAG	1 cut(s)	748
SsiI	CCGC	8 cut(s)	137, 176, 234, 922, 1268, 2039, 2608, 2860
SspDI	GGCGCC	1 cut(s)	2126
SspI	AATATT	2 cut(s)	1968, 2476
SspMI	CTAG	5 cut(s)	677, 1074, 1667, 2108, 2258
SstI	GAGCTC	1 cut(s)	851
StyD4I	CCNGG	5 cut(s)	72, 1219, 1894, 2561, 2562
StyI	CCWWGG	7 cut(s)	498, 676, 1142, 1455, 1692, 2197, 2441
TaaI	ACNGT	7 cut(s)	278, 692, 1295, 1567, 1840, 1870, 2268
TaiI	ACGT	2 cut(s)	461, 1746
TaqI	TCGA	6 cut(s)	396, 464, 597, 901, 2283, 2435
TaqII	GACCGA	1 cut(s)	2801
TatI	WGTACW	3 cut(s)	1382, 2449, 2837
TauI	GCSGC	3 cut(s)	140, 924, 2863
TfiI	GAWTC	5 cut(s)	672, 825, 1432, 1879, 2382
TseFI	GTSAC	3 cut(s)	913, 1004, 1480
TseI	GCWGC	4 cut(s)	1721, 2075, 2216, 2228
Tsp45I	GTSAC	3 cut(s)	913, 1004, 1480
TspGWI	ACGGA	1 cut(s)	134
TspMI	CCCGGG	1 cut(s)	2562
Van91I	CCANNNNNTGG	2 cut(s)	212, 578
VpaK11BI	GGWCC	6 cut(s)	121, 416, 488, 1301, 1791, 1823
VspI	ATTAAT	1 cut(s)	1964
XagI	CCTNNNNNAGG	3 cut(s)	699, 1809, 2336
XapI	RAATTY	9 cut(s)	636, 763, 814, 871, 1021, 1243, 1764, 2298, 3085
XmaI	CCCGGG	1 cut(s)	2562
XmaJI	CCTAGG	1 cut(s)	676
XmiI	GTMKAC	1 cut(s)	3029
XmnI	GAANNNNTTC	3 cut(s)	407, 1730, 2022
XspI	CTAG	5 cut(s)	677, 1074, 1667, 2108, 2258

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.