RLG00000037039
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
87727660 .. 87730624
2965 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000037039

Sequence Viewer

Length: 839 bp
ATGATTAACTGCAGTGGTCCTCGGACTACGTTATCCAATGGAATTGTGTATGAGACGGACACTGTGCCCCTTGGTCCAGCTACATATTATGTGACTGACACAAACAGATGGGGAGTTAGCAATGTGTACAAGGCTCAGGTGGTTTCAGAGAATTACCATGAAATCCATTTCTCCTGGGCTGGAAAGGGGACTTGCTGTATACCAGAGGAGGGTACATATGGACCTCTTATTTCAGCCATCAGTGCTACACCTGTGGGTATCTTGCGCACCGGAATATGCTATGCGCCTATGCGTGGACACTTGACAGAGAAGACCGATGTGTTTGCCTATGGTGTTGTCATTCTAGAAATTGTAAGCGGTAGGCCAAATTCTGATCCAAGTTTGGAAGGCGATATGGTTTATCTTCTTAAATTGAGGTTTAGGTTTACCATAACACATCTTTTAGTTATCTTCAGCATTGTTTCACTTCATAATACTATTGTGTTCTTCCTCCTTAGATTATCTGAACTCAATAAGGAAGAAGCAAGACGAATTATCAACATAGGACTTTTGTGCACTCAGTCATCACCAATGCTACGACCACCCATGTCTCGCGTGATCGGAATGCTTGCAGGAGATATTGAAACGTACTGGAGATTTGATGATGCACCTACCATCACCAGCCAAACGAAATTTGGTGATGGGAGTACTGGCAACAGTCTAGGAACTGATATGTCAACTAGAGGAACTGACTTCAGCTTTTACAACTCGTCGGCAAGTACAAGCGTGATTGAGGATGCAGGGCAATTACCTTCAAATGCCACTCTTCCCATACTCGATAATACGAATGGTGGTGGTAG

Protein Analysis

279

Amino Acids

30.41

Weight (kDa)

5.37

Isoelectric Point (pI)

39.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 266
AccI GTMKAC 1 cut(s) 199
AccII CGCG 1 cut(s) 594
AciI CCGC 1 cut(s) 357
AclWI GGATC 1 cut(s) 368
AcsI RAATTY 2 cut(s) 367, 671
AcuI CTGAAG 2 cut(s) 436, 718
AfaI GTAC 5 cut(s) 128, 214, 629, 688, 760
AfiI CCNNNNNNNGG 2 cut(s) 209, 293
AgsI TTSAA 2 cut(s) 623, 795
AjnI CCWGG 1 cut(s) 173
AluBI AGCT 2 cut(s) 80, 738
AluI AGCT 2 cut(s) 80, 738
Alw21I GWGCWC 1 cut(s) 557
Alw26I GTCTC 2 cut(s) 47, 594
Alw44I GTGCAC 1 cut(s) 553
AlwI GGATC 1 cut(s) 368
AoxI GGCC 1 cut(s) 362
ApaLI GTGCAC 1 cut(s) 553
ApoI RAATTY 2 cut(s) 367, 671
AspLEI GCGC 2 cut(s) 267, 286
AspS9I GGNCC 3 cut(s) 17, 74, 221
AsuHPI GGTGA 3 cut(s) 558, 649, 689
AvaII GGWCC 3 cut(s) 17, 74, 221
BaeGI GKGCMC 2 cut(s) 69, 557
BbsI GAAGAC 1 cut(s) 317
Bbv12I GWGCWC 1 cut(s) 557
BccI CCATC 4 cut(s) 102, 245, 662, 674
BcgI CGANNNNNNTGC 2 cut(s) 305, 339
BciT130I CCWGG 1 cut(s) 175
BcoDI GTCTC 2 cut(s) 47, 594
BfaI CTAG 3 cut(s) 344, 701, 720
BfmI CTRYAG 1 cut(s) 10
BmcAI AGTACT 1 cut(s) 688
Bme1390I CCNGG 1 cut(s) 175
Bme18I GGWCC 3 cut(s) 17, 74, 221
BmgT120I GGNCC 3 cut(s) 17, 74, 221
BmrFI CCNGG 1 cut(s) 175
BmsI GCATC 2 cut(s) 634, 766
BpiI GAAGAC 1 cut(s) 317
BpmI CTGGAG 1 cut(s) 652
Bpu10I CCTNAGC 1 cut(s) 135
BsaJI CCNNGG 3 cut(s) 20, 70, 174
BsaWI WCCGGW 1 cut(s) 269
Bsc4I CCNNNNNNNGG 2 cut(s) 209, 293
Bse1I ACTGG 2 cut(s) 635, 694
Bse3DI GCAATG 1 cut(s) 127
BseBI CCWGG 1 cut(s) 175
BseDI CCNNGG 3 cut(s) 20, 70, 174
BseGI GGATG 1 cut(s) 781
BseLI CCNNNNNNNGG 2 cut(s) 209, 293
BseMI GCAATG 1 cut(s) 127
BseMII CTCAG 2 cut(s) 149, 572
BseNI ACTGG 2 cut(s) 635, 694
BseRI GAGGAG 1 cut(s) 221
BseSI GKGCMC 2 cut(s) 69, 557
Bsh1236I CGCG 1 cut(s) 594
BshFI GGCC 1 cut(s) 364
BsiHKAI GWGCWC 1 cut(s) 557
BsiSI CCGG 1 cut(s) 270
BslFI GGGAC 1 cut(s) 202
BslI CCNNNNNNNGG 2 cut(s) 209, 293
BsmAI GTCTC 2 cut(s) 47, 594
BsmBI CGTCTC 1 cut(s) 47
BsmFI GGGAC 1 cut(s) 202
BsmI GAATGC 1 cut(s) 609
BsnI GGCC 1 cut(s) 364
Bsp1286I GDGCHC 2 cut(s) 69, 557
Bsp1407I TGTACA 1 cut(s) 126
Bsp143I GATC 2 cut(s) 373, 597
BspACI CCGC 1 cut(s) 357
BspANI GGCC 1 cut(s) 364
BspCNI CTCAG 2 cut(s) 148, 571
BspFNI CGCG 1 cut(s) 594
BspMAI CTGCAG 1 cut(s) 14
BspPI GGATC 1 cut(s) 368
BsrDI GCAATG 1 cut(s) 127
BsrGI TGTACA 1 cut(s) 126
BsrI ACTGG 2 cut(s) 635, 694
BssECI CCNNGG 3 cut(s) 20, 70, 174
BssMI GATC 2 cut(s) 373, 597
BssNAI GTATAC 1 cut(s) 200
BssT1I CCWWGG 1 cut(s) 70
Bst1107I GTATAC 1 cut(s) 200
Bst2UI CCWGG 1 cut(s) 175
Bst4CI ACNGT 2 cut(s) 64, 698
Bst6I CTCTTC 1 cut(s) 810
BstAUI TGTACA 1 cut(s) 126
BstC8I GCNNGC 1 cut(s) 609
BstDEI CTNAG 3 cut(s) 135, 494, 558
BstF5I GGATG 1 cut(s) 781
BstFNI CGCG 1 cut(s) 594
BstHHI GCGC 2 cut(s) 267, 286
BstKTI GATC 2 cut(s) 376, 600
BstMAI GTCTC 2 cut(s) 47, 594
BstMBI GATC 2 cut(s) 373, 597
BstMWI GCNNNNNNNGC 1 cut(s) 242
BstNI CCWGG 1 cut(s) 175
BstSCI CCNGG 1 cut(s) 173
BstSFI CTRYAG 1 cut(s) 10
BstSLI GKGCMC 2 cut(s) 69, 557
BstUI CGCG 1 cut(s) 594
BstV2I GAAGAC 1 cut(s) 317
BstZ17I GTATAC 1 cut(s) 200
BsuRI GGCC 1 cut(s) 364
BtsCI GGATG 1 cut(s) 781
BtsI GCAGTG 1 cut(s) 19
BtsIMutI CAGTG 3 cut(s) 19, 60, 247
Cac8I GCNNGC 1 cut(s) 609
CfoI GCGC 2 cut(s) 267, 286
Cfr13I GGNCC 3 cut(s) 17, 74, 221
Csp6I GTAC 5 cut(s) 127, 213, 628, 687, 759
CviAII CATG 2 cut(s) 158, 586
CviJI RGCY 7 cut(s) 80, 134, 179, 236, 364, 663, 738
CviKI_1 RGCY 7 cut(s) 80, 134, 179, 236, 364, 663, 738
CviQI GTAC 5 cut(s) 127, 213, 628, 687, 759
DdeI CTNAG 3 cut(s) 135, 494, 558
DpnI GATC 2 cut(s) 375, 599
DpnII GATC 2 cut(s) 373, 597
Eam1104I CTCTTC 1 cut(s) 810
EarI CTCTTC 1 cut(s) 810
Eco130I CCWWGG 1 cut(s) 70
Eco47I GGWCC 3 cut(s) 17, 74, 221
Eco57I CTGAAG 2 cut(s) 436, 718
EcoRII CCWGG 1 cut(s) 173
EcoT14I CCWWGG 1 cut(s) 70
ErhI CCWWGG 1 cut(s) 70
Esp3I CGTCTC 1 cut(s) 47
FaeI CATG 2 cut(s) 161, 589
FaqI GGGAC 1 cut(s) 202
FatI CATG 2 cut(s) 157, 585
FauNDI CATATG 1 cut(s) 217
FblI GTMKAC 1 cut(s) 199
FokI GGATG 1 cut(s) 788
FspBI CTAG 3 cut(s) 344, 701, 720
FspI TGCGCA 1 cut(s) 266
GlaI GCGC 2 cut(s) 266, 285
GsuI CTGGAG 1 cut(s) 652
HaeIII GGCC 1 cut(s) 364
HapII CCGG 1 cut(s) 270
HhaI GCGC 2 cut(s) 267, 286
Hin1II CATG 2 cut(s) 161, 589
Hin6I GCGC 2 cut(s) 265, 284
HinP1I GCGC 2 cut(s) 265, 284
HincII GTYRAC 1 cut(s) 717
HindII GTYRAC 1 cut(s) 717
HpaII CCGG 1 cut(s) 270
HphI GGTGA 3 cut(s) 558, 649, 689
Hpy166II GTNNAC 6 cut(s) 127, 200, 296, 426, 555, 717
Hpy188I TCNGA 5 cut(s) 24, 148, 373, 505, 602
Hpy188III TCNNGA 1 cut(s) 344
Hpy8I GTNNAC 6 cut(s) 127, 200, 296, 426, 555, 717
Hpy99I CGWCG 1 cut(s) 754
HpyAV CCTTC 2 cut(s) 380, 801
HpyCH4III ACNGT 2 cut(s) 64, 698
HpyCH4IV ACGT 2 cut(s) 29, 626
HpyCH4V TGCA 5 cut(s) 12, 555, 611, 647, 779
HpyF10VI GCNNNNNNNGC 1 cut(s) 242
HpyF3I CTNAG 3 cut(s) 135, 494, 558
HpySE526I ACGT 2 cut(s) 29, 626
Hsp92II CATG 2 cut(s) 161, 589
HspAI GCGC 2 cut(s) 265, 284
Kzo9I GATC 2 cut(s) 373, 597
LweI GCATC 2 cut(s) 634, 766
MaeI CTAG 3 cut(s) 344, 701, 720
MaeII ACGT 2 cut(s) 29, 626
MaeIII GTNAC 1 cut(s) 91
MalI GATC 2 cut(s) 375, 599
MboI GATC 2 cut(s) 373, 597
MboII GAAGA 6 cut(s) 322, 395, 442, 478, 530, 797
MhlI GDGCHC 2 cut(s) 69, 557
MluCI AATT 8 cut(s) 42, 151, 348, 367, 410, 531, 671, 785
MnlI CCTC 8 cut(s) 30, 199, 202, 234, 408, 500, 716, 766
MseI TTAA 2 cut(s) 6, 408
MspI CCGG 1 cut(s) 270
MspR9I CCNGG 1 cut(s) 175
Mva1269I GAATGC 1 cut(s) 609
MvaI CCWGG 1 cut(s) 175
MvnI CGCG 1 cut(s) 594
MwoI GCNNNNNNNGC 1 cut(s) 242
NdeI CATATG 1 cut(s) 217
NdeII GATC 2 cut(s) 373, 597
NlaIII CATG 2 cut(s) 161, 589
NmuCI GTSAC 1 cut(s) 91
NsbI TGCGCA 1 cut(s) 266
PctI GAATGC 1 cut(s) 609
Psp6I CCWGG 1 cut(s) 173
PspGI CCWGG 1 cut(s) 173
PspPI GGNCC 3 cut(s) 17, 74, 221
PstI CTGCAG 1 cut(s) 14
RsaI GTAC 5 cut(s) 128, 214, 629, 688, 760
RsaNI GTAC 5 cut(s) 127, 213, 628, 687, 759
SaqAI TTAA 2 cut(s) 6, 408
Sau3AI GATC 2 cut(s) 373, 597
Sau96I GGNCC 3 cut(s) 17, 74, 221
ScaI AGTACT 1 cut(s) 688
ScrFI CCNGG 1 cut(s) 175
SduI GDGCHC 2 cut(s) 69, 557
SfaNI GCATC 2 cut(s) 634, 766
SfcI CTRYAG 1 cut(s) 10
SinI GGWCC 3 cut(s) 17, 74, 221
Sse9I AATT 8 cut(s) 42, 151, 348, 367, 410, 531, 671, 785
SsiI CCGC 1 cut(s) 357
SspMI CTAG 3 cut(s) 344, 701, 720
StyD4I CCNGG 1 cut(s) 173
StyI CCWWGG 1 cut(s) 70
TaaI ACNGT 2 cut(s) 64, 698
TaiI ACGT 2 cut(s) 32, 629
TaqI TCGA 1 cut(s) 816
TaqII GACCGA 1 cut(s) 329
TasI AATT 8 cut(s) 42, 151, 348, 367, 410, 531, 671, 785
TatI WGTACW 3 cut(s) 126, 686, 758
Tru1I TTAA 2 cut(s) 6, 408
Tru9I TTAA 2 cut(s) 6, 408
TscAI CASTG 3 cut(s) 19, 67, 247
TseFI GTSAC 1 cut(s) 91
Tsp45I GTSAC 1 cut(s) 91
TspDTI ATGAA 2 cut(s) 174, 458
TspGWI ACGGA 1 cut(s) 71
TspRI CASTG 3 cut(s) 19, 67, 247
VneI GTGCAC 1 cut(s) 553
VpaK11BI GGWCC 3 cut(s) 17, 74, 221
XapI RAATTY 2 cut(s) 367, 671
XbaI TCTAGA 1 cut(s) 343
XcmI CCANNNNNNNNNTGG 1 cut(s) 671
XmiI GTMKAC 1 cut(s) 199
XspI CTAG 3 cut(s) 344, 701, 720
ZrmI AGTACT 1 cut(s) 688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.