Rh5AG137800

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
14207116 .. 14212107
4992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG137800.1

Sequence Viewer

Length: 369 bp
ATGTACGATGTACAATGTACGACGAGAGTCTATGCTCTAAACAAACGAGGAGTGTTTGCAAAGGAACTTTTGGCTTTGAGATACCTGACCTTCTTGAAAATCGATCAGAATTATTTCACAGGTCCTCTACCAGCATGGATCGGCAATATGACTGCATTGACATTATTGTCAATTGCTCACAATGCATTCTCTGGGCCCATCCCCAAGGAGCGTGGAAACCTCAAGGACTTAAATATGCTTTACATAAACAGCTGTGGACTCGGTGGTGAAATTCCTTCAACATTTGCTAACCTCCGCAATATGCAAGTCCTGCAGACCACCTTGGCTGAGATTCTTGCTCACAGTTCTCTTAAATTCTTCCTGGATTAA

Protein Analysis

122

Amino Acids

13.66

Weight (kDa)

9.0

Isoelectric Point (pI)

36.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 166
AciI CCGC 1 cut(s) 295
AclWI GGATC 1 cut(s) 146
AcsI RAATTY 2 cut(s) 270, 353
AfaI GTAC 3 cut(s) 5, 12, 19
AgsI TTSAA 2 cut(s) 97, 279
AjnI CCWGG 1 cut(s) 360
AluBI AGCT 1 cut(s) 252
AluI AGCT 1 cut(s) 252
AlwI GGATC 1 cut(s) 146
AoxI GGCC 1 cut(s) 194
ApaI GGGCCC 1 cut(s) 198
ApoI RAATTY 2 cut(s) 270, 353
Asp700I GAANNNNTTC 1 cut(s) 113
AspS9I GGNCC 3 cut(s) 122, 194, 195
AsuHPI GGTGA 1 cut(s) 278
AvaII GGWCC 1 cut(s) 122
BaeGI GKGCMC 1 cut(s) 198
BanII GRGCYC 1 cut(s) 198
BccI CCATC 1 cut(s) 206
BciT130I CCWGG 1 cut(s) 362
BfmI CTRYAG 1 cut(s) 311
Bme1390I CCNGG 1 cut(s) 362
Bme18I GGWCC 1 cut(s) 122
BmgT120I GGNCC 3 cut(s) 122, 194, 195
BmiI GGNNCC 1 cut(s) 196
BmrFI CCNGG 1 cut(s) 362
BoxI GACNNNNGTC 1 cut(s) 26
BpuEI CTTGAG 1 cut(s) 206
Bsa29I ATCGAT 1 cut(s) 102
BsaJI CCNNGG 2 cut(s) 204, 321
BseBI CCWGG 1 cut(s) 362
BseCI ATCGAT 1 cut(s) 102
BseDI CCNNGG 2 cut(s) 204, 321
BseGI GGATG 1 cut(s) 198
BseMII CTCAG 1 cut(s) 318
BseRI GAGGAG 1 cut(s) 63
BseSI GKGCMC 1 cut(s) 198
BshFI GGCC 1 cut(s) 196
BshVI ATCGAT 1 cut(s) 102
BsmI GAATGC 1 cut(s) 185
BsnI GGCC 1 cut(s) 196
Bsp120I GGGCCC 1 cut(s) 194
Bsp1286I GDGCHC 1 cut(s) 198
Bsp1407I TGTACA 1 cut(s) 10
Bsp143I GATC 2 cut(s) 103, 138
BspACI CCGC 1 cut(s) 295
BspANI GGCC 1 cut(s) 196
BspCNI CTCAG 1 cut(s) 319
BspDI ATCGAT 1 cut(s) 102
BspLI GGNNCC 1 cut(s) 196
BspMAI CTGCAG 1 cut(s) 315
BspPI GGATC 1 cut(s) 146
BsrGI TGTACA 1 cut(s) 10
BssECI CCNNGG 2 cut(s) 204, 321
BssMI GATC 2 cut(s) 103, 138
BssT1I CCWWGG 2 cut(s) 204, 321
Bst2UI CCWGG 1 cut(s) 362
Bst4CI ACNGT 1 cut(s) 344
BstAPI GCANNNNNTGC 1 cut(s) 310
BstAUI TGTACA 1 cut(s) 10
BstDEI CTNAG 1 cut(s) 327
BstF5I GGATG 1 cut(s) 198
BstKTI GATC 2 cut(s) 106, 141
BstMBI GATC 2 cut(s) 103, 138
BstMWI GCNNNNNNNGC 2 cut(s) 182, 310
BstNI CCWGG 1 cut(s) 362
BstPAI GACNNNNGTC 1 cut(s) 26
BstSCI CCNGG 1 cut(s) 360
BstSFI CTRYAG 1 cut(s) 311
BstSLI GKGCMC 1 cut(s) 198
Bsu15I ATCGAT 1 cut(s) 102
BsuRI GGCC 1 cut(s) 196
BsuTUI ATCGAT 1 cut(s) 102
BtsCI GGATG 1 cut(s) 198
Cfr13I GGNCC 3 cut(s) 122, 194, 195
ClaI ATCGAT 1 cut(s) 102
Csp6I GTAC 3 cut(s) 4, 11, 18
CspCI CAANNNNNGTGG 2 cut(s) 193, 228
CviAII CATG 1 cut(s) 135
CviJI RGCY 4 cut(s) 74, 196, 252, 326
CviKI_1 RGCY 4 cut(s) 74, 196, 252, 326
CviQI GTAC 3 cut(s) 4, 11, 18
DdeI CTNAG 1 cut(s) 327
DpnI GATC 2 cut(s) 105, 140
DpnII GATC 2 cut(s) 103, 138
DrdI GACNNNNNNGTC 1 cut(s) 166
DseDI GACNNNNNNGTC 1 cut(s) 166
Eco130I CCWWGG 2 cut(s) 204, 321
Eco24I GRGCYC 1 cut(s) 198
Eco47I GGWCC 1 cut(s) 122
EcoO109I RGGNCCY 1 cut(s) 122
EcoRII CCWGG 1 cut(s) 360
EcoT14I CCWWGG 2 cut(s) 204, 321
EcoT22I ATGCAT 1 cut(s) 187
EcoT38I GRGCYC 1 cut(s) 198
ErhI CCWWGG 2 cut(s) 204, 321
FaeI CATG 1 cut(s) 138
FaiI YATR 6 cut(s) 33, 136, 149, 236, 245, 302
FatI CATG 1 cut(s) 134
FokI GGATG 1 cut(s) 185
FriOI GRGCYC 1 cut(s) 198
HaeIII GGCC 1 cut(s) 196
Hin1II CATG 1 cut(s) 138
HinfI GANTC 3 cut(s) 27, 258, 331
HphI GGTGA 1 cut(s) 278
Hpy166II GTNNAC 1 cut(s) 257
Hpy188I TCNGA 1 cut(s) 108
Hpy188III TCNNGA 1 cut(s) 94
Hpy8I GTNNAC 1 cut(s) 257
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 2 cut(s) 100, 285
HpyCH4III ACNGT 1 cut(s) 344
HpyCH4V TGCA 5 cut(s) 59, 155, 185, 304, 313
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 310
HpyF3I CTNAG 1 cut(s) 327
Hsp92II CATG 1 cut(s) 138
Kzo9I GATC 2 cut(s) 103, 138
LmnI GCTCC 1 cut(s) 208
LpnPI CCDG 6 cut(s) 98, 105, 144, 177, 323, 347
MalI GATC 2 cut(s) 105, 140
MboI GATC 2 cut(s) 103, 138
MboII GAAGA 1 cut(s) 349
MfeI CAATTG 1 cut(s) 171
MhlI GDGCHC 1 cut(s) 198
MluCI AATT 4 cut(s) 109, 171, 270, 353
MlyI GAGTC 2 cut(s) 36, 252
MnlI CCTC 4 cut(s) 41, 135, 230, 302
Mph1103I ATGCAT 1 cut(s) 187
MroXI GAANNNNTTC 1 cut(s) 113
MseI TTAA 3 cut(s) 230, 351, 367
MspA1I CMGCKG 1 cut(s) 252
MspR9I CCNGG 1 cut(s) 362
MunI CAATTG 1 cut(s) 171
Mva1269I GAATGC 1 cut(s) 185
MvaI CCWGG 1 cut(s) 362
MwoI GCNNNNNNNGC 2 cut(s) 182, 310
NdeII GATC 2 cut(s) 103, 138
NlaIII CATG 1 cut(s) 138
NlaIV GGNNCC 1 cut(s) 196
NsiI ATGCAT 1 cut(s) 187
PctI GAATGC 1 cut(s) 185
PdmI GAANNNNTTC 1 cut(s) 113
PfeI GAWTC 1 cut(s) 331
PfoI TCCNGGA 1 cut(s) 360
PleI GAGTC 2 cut(s) 35, 252
PpsI GAGTC 2 cut(s) 35, 252
PpuMI RGGWCCY 1 cut(s) 122
PshAI GACNNNNGTC 1 cut(s) 26
Psp5II RGGWCCY 1 cut(s) 122
Psp6I CCWGG 1 cut(s) 360
PspGI CCWGG 1 cut(s) 360
PspN4I GGNNCC 1 cut(s) 196
PspOMI GGGCCC 1 cut(s) 194
PspPI GGNCC 3 cut(s) 122, 194, 195
PspPPI RGGWCCY 1 cut(s) 122
PstI CTGCAG 1 cut(s) 315
PvuII CAGCTG 1 cut(s) 252
RsaI GTAC 3 cut(s) 5, 12, 19
RsaNI GTAC 3 cut(s) 4, 11, 18
SaqAI TTAA 3 cut(s) 230, 351, 367
Sau3AI GATC 2 cut(s) 103, 138
Sau96I GGNCC 3 cut(s) 122, 194, 195
SchI GAGTC 2 cut(s) 36, 252
ScrFI CCNGG 1 cut(s) 362
SduI GDGCHC 1 cut(s) 198
SetI ASST 7 cut(s) 87, 92, 124, 222, 254, 294, 323
SfcI CTRYAG 1 cut(s) 311
SinI GGWCC 1 cut(s) 122
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
Sse9I AATT 4 cut(s) 109, 171, 270, 353
SsiI CCGC 1 cut(s) 295
StyD4I CCNGG 1 cut(s) 360
StyI CCWWGG 2 cut(s) 204, 321
TaaI ACNGT 1 cut(s) 344
TaqI TCGA 1 cut(s) 102
TasI AATT 4 cut(s) 109, 171, 270, 353
TatI WGTACW 1 cut(s) 10
TfiI GAWTC 1 cut(s) 331
Tru1I TTAA 3 cut(s) 230, 351, 367
Tru9I TTAA 3 cut(s) 230, 351, 367
VpaK11BI GGWCC 1 cut(s) 122
XapI RAATTY 2 cut(s) 270, 353
XmnI GAANNNNTTC 1 cut(s) 113
Zsp2I ATGCAT 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.