Rorug02G0190900
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
17804493 .. 17807070
2578 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0190900.1

Sequence Viewer

Length: 882 bp
ATGGTGAAGATGGTGTGGCTTATCTTCTTCCAGCTTCTGTTTCTGGGTATTTCTGGTGCAAGGCAAGAATCAGCTCAAGTCCTAGCTCTCTCTGAGACATCCCATGAGGTTCTACAAGATTCAACCTACTCTGTGAACCCACCTCCAAAGGTCTCACCTTTCTCTGATACCCTTAAACTGGTGTCTTCTCACTCAGAAACCCTTAAAAAGCTTGGATTTTTGGGGCTCAGAAACATCAATGTGATGGTCACCAACCCAAAGGAGGCAAAACCAAGAACCAGAAAGCTCTCTTCCATTGACCCATTTCCAGCTAGACCAAACCCACTACCCAAAACCTCAGACCCCCCACTCCACTCCTCTGTTGGCTTCTCTGTTCCTGCCAATGTAGCCAAAAACCCTCAACCTCCACACGCTCAAGTAGCCTCACCAGCACCAGCCCAAACAGCCTCACCTCCAATCCCTGAAACAGCATCACCCCCAGTCGAAATGTCTTTTCCCGAAGCCCCCGAAATCTCTCCTGTTTACCATCAAGCCACCCCTCCCCCTTTTGCTTACGAATTGCCACCGTGTAATCCGAGAGCCCCGGCACCTGGAATTGGGTTTGTGCATAAACTGTGGTGTGTAGCCAAGCCTACTGTTCCGGCAGACACATTGCAGGAGGCTGTGGACTATGCTTGTGGAGCTGGTGGTGCTGATTGCCAGGAGATTATGCCAAGCGGAAACTGCTACTATCCTGAGTCTGTTGTGGCCCATGCTTCGTATGCTTTCAACAGCTACTGGCAGAAGAACAAGAGGAATGGAGGCACTTGCAGCTTTGGTGGCACTGCTATGCTTATCAACAGTGATCCAAGTTATCAACTATGCCGTTTTGTTATCACCTAA

Protein Analysis

293

Amino Acids

31.55

Weight (kDa)

7.61

Isoelectric Point (pI)

59.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
X8 PF07983 205 - 277 1.4e-23 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 586
AciI CCGC 1 cut(s) 717
AclWI GGATC 1 cut(s) 839
AfiI CCNNNNNNNGG 4 cut(s) 178, 262, 590, 596
AgsI TTSAA 2 cut(s) 123, 769
AjnI CCWGG 2 cut(s) 589, 699
AluBI AGCT 9 cut(s) 34, 74, 86, 211, 286, 311, 683, 774, 813
AluI AGCT 9 cut(s) 34, 74, 86, 211, 286, 311, 683, 774, 813
Alw26I GTCTC 2 cut(s) 89, 157
AlwI GGATC 1 cut(s) 839
AlwNI CAGNNNCTG 2 cut(s) 37, 777
AoxI GGCC 1 cut(s) 747
ApeKI GCWGC 1 cut(s) 810
AspS9I GGNCC 1 cut(s) 748
AsuC2I CCSGG 1 cut(s) 584
AsuHPI GGTGA 7 cut(s) 16, 147, 241, 417, 441, 465, 868
BanI GGYRCC 1 cut(s) 586
BanII GRGCYC 2 cut(s) 228, 583
BbsI GAAGAC 1 cut(s) 177
BbvI GCAGC 1 cut(s) 822
BccI CCATC 3 cut(s) 4, 238, 534
BceAI ACGGC 1 cut(s) 849
BciT130I CCWGG 2 cut(s) 591, 701
BcnI CCSGG 1 cut(s) 584
BcoDI GTCTC 2 cut(s) 89, 157
BfaI CTAG 2 cut(s) 83, 312
BisI GCNGC 1 cut(s) 811
BlsI GCNGC 1 cut(s) 812
Bme1390I CCNGG 3 cut(s) 584, 591, 701
BmgT120I GGNCC 1 cut(s) 748
BmiI GGNNCC 1 cut(s) 588
BmrFI CCNGG 3 cut(s) 584, 591, 701
BmrI ACTGGG 1 cut(s) 473
BmsI GCATC 1 cut(s) 479
BmuI ACTGGG 1 cut(s) 473
BpiI GAAGAC 1 cut(s) 177
BpuEI CTTGAG 2 cut(s) 60, 399
BpuMI CCSGG 1 cut(s) 584
BsaI GGTCTC 1 cut(s) 157
BsaJI CCNNGG 1 cut(s) 582
Bsc4I CCNNNNNNNGG 4 cut(s) 178, 262, 590, 596
Bse1I ACTGG 3 cut(s) 183, 479, 782
Bse3DI GCAATG 1 cut(s) 650
BseBI CCWGG 2 cut(s) 591, 701
BseDI CCNNGG 1 cut(s) 582
BseGI GGATG 1 cut(s) 98
BseLI CCNNNNNNNGG 4 cut(s) 178, 262, 590, 596
BseMI GCAATG 1 cut(s) 650
BseMII CTCAG 5 cut(s) 84, 207, 241, 351, 726
BseNI ACTGG 3 cut(s) 183, 479, 782
BseRI GAGGAG 1 cut(s) 346
BseXI GCAGC 1 cut(s) 822
BshFI GGCC 1 cut(s) 749
BshNI GGYRCC 1 cut(s) 586
BsiSI CCGG 2 cut(s) 584, 641
BslI CCNNNNNNNGG 4 cut(s) 178, 262, 590, 596
BsmAI GTCTC 2 cut(s) 89, 157
BsnI GGCC 1 cut(s) 749
Bso31I GGTCTC 1 cut(s) 157
Bsp1286I GDGCHC 2 cut(s) 228, 583
Bsp143I GATC 1 cut(s) 844
BspACI CCGC 1 cut(s) 717
BspANI GGCC 1 cut(s) 749
BspCNI CTCAG 5 cut(s) 85, 206, 240, 350, 727
BspLI GGNNCC 1 cut(s) 588
BspPI GGATC 1 cut(s) 839
BspT107I GGYRCC 1 cut(s) 586
BspTNI GGTCTC 1 cut(s) 157
BsrDI GCAATG 1 cut(s) 650
BsrI ACTGG 3 cut(s) 183, 479, 782
BssECI CCNNGG 1 cut(s) 582
BssMI GATC 1 cut(s) 844
Bst2UI CCWGG 2 cut(s) 591, 701
Bst4CI ACNGT 4 cut(s) 567, 615, 637, 842
Bst6I CTCTTC 1 cut(s) 295
BstDEI CTNAG 5 cut(s) 93, 193, 227, 337, 735
BstEII GGTNACC 1 cut(s) 247
BstF5I GGATG 1 cut(s) 98
BstKTI GATC 1 cut(s) 847
BstMAI GTCTC 2 cut(s) 89, 157
BstMBI GATC 1 cut(s) 844
BstNI CCWGG 2 cut(s) 591, 701
BstPI GGTNACC 1 cut(s) 247
BstSCI CCNGG 3 cut(s) 582, 589, 699
BstV1I GCAGC 1 cut(s) 822
BstV2I GAAGAC 1 cut(s) 177
BsuRI GGCC 1 cut(s) 749
BtsCI GGATG 1 cut(s) 98
BtsI GCAGTG 1 cut(s) 822
BtsIMutI CAGTG 2 cut(s) 822, 847
CaiI CAGNNNCTG 2 cut(s) 37, 777
Cfr13I GGNCC 1 cut(s) 748
CviAII CATG 2 cut(s) 104, 752
DdeI CTNAG 5 cut(s) 93, 193, 227, 337, 735
DpnI GATC 1 cut(s) 846
DpnII GATC 1 cut(s) 844
Eam1104I CTCTTC 1 cut(s) 295
EarI CTCTTC 1 cut(s) 295
Eco24I GRGCYC 2 cut(s) 228, 583
Eco31I GGTCTC 1 cut(s) 157
Eco91I GGTNACC 1 cut(s) 247
EcoO65I GGTNACC 1 cut(s) 247
EcoRII CCWGG 2 cut(s) 589, 699
EcoT38I GRGCYC 2 cut(s) 228, 583
FaeI CATG 2 cut(s) 107, 755
FaiI YATR 8 cut(s) 105, 609, 672, 710, 753, 762, 830, 862
FatI CATG 2 cut(s) 103, 751
Fnu4HI GCNGC 1 cut(s) 811
FokI GGATG 1 cut(s) 85
FriOI GRGCYC 2 cut(s) 228, 583
Fsp4HI GCNGC 1 cut(s) 811
FspBI CTAG 2 cut(s) 83, 312
GluI GCNGC 1 cut(s) 811
HaeIII GGCC 1 cut(s) 749
HapII CCGG 2 cut(s) 584, 641
Hin1II CATG 2 cut(s) 107, 755
HindIII AAGCTT 1 cut(s) 209
HinfI GANTC 3 cut(s) 68, 119, 737
HpaII CCGG 2 cut(s) 584, 641
HphI GGTGA 7 cut(s) 16, 147, 241, 417, 441, 465, 868
Hpy166II GTNNAC 3 cut(s) 136, 523, 667
Hpy188I TCNGA 6 cut(s) 94, 166, 196, 230, 340, 576
Hpy188III TCNNGA 2 cut(s) 497, 734
Hpy8I GTNNAC 3 cut(s) 136, 523, 667
HpyCH4III ACNGT 4 cut(s) 567, 615, 637, 842
HpyCH4V TGCA 4 cut(s) 59, 607, 655, 810
HpyF3I CTNAG 5 cut(s) 93, 193, 227, 337, 735
Hsp92II CATG 2 cut(s) 107, 755
Kzo9I GATC 1 cut(s) 844
LmnI GCTCC 1 cut(s) 680
Lsp1109I GCAGC 1 cut(s) 822
LweI GCATC 1 cut(s) 479
MaeI CTAG 2 cut(s) 83, 312
MaeIII GTNAC 1 cut(s) 247
MalI GATC 1 cut(s) 846
MboI GATC 1 cut(s) 844
MboII GAAGA 6 cut(s) 16, 19, 19, 177, 282, 796
MhlI GDGCHC 2 cut(s) 228, 583
MluCI AATT 2 cut(s) 557, 594
MlyI GAGTC 1 cut(s) 746
MseI TTAA 2 cut(s) 174, 204
MslI CAYNNNNRTG 2 cut(s) 239, 827
MspI CCGG 2 cut(s) 584, 641
MspR9I CCNGG 3 cut(s) 584, 591, 701
MvaI CCWGG 2 cut(s) 591, 701
NciI CCSGG 1 cut(s) 584
NdeII GATC 1 cut(s) 844
NlaIII CATG 2 cut(s) 107, 755
NlaIV GGNNCC 1 cut(s) 588
NmuCI GTSAC 1 cut(s) 247
PfeI GAWTC 2 cut(s) 68, 119
PkrI GCNGC 1 cut(s) 812
PleI GAGTC 1 cut(s) 745
PpsI GAGTC 1 cut(s) 745
Psp6I CCWGG 2 cut(s) 589, 699
PspEI GGTNACC 1 cut(s) 247
PspGI CCWGG 2 cut(s) 589, 699
PspN4I GGNNCC 1 cut(s) 588
PspPI GGNCC 1 cut(s) 748
PstNI CAGNNNCTG 2 cut(s) 37, 777
RseI CAYNNNNRTG 2 cut(s) 239, 827
SaqAI TTAA 2 cut(s) 174, 204
SatI GCNGC 1 cut(s) 811
Sau3AI GATC 1 cut(s) 844
Sau96I GGNCC 1 cut(s) 748
SchI GAGTC 1 cut(s) 746
ScrFI CCNGG 3 cut(s) 584, 591, 701
SduI GDGCHC 2 cut(s) 228, 583
SfaNI GCATC 1 cut(s) 479
SmiMI CAYNNNNRTG 2 cut(s) 239, 827
SmlI CTYRAG 2 cut(s) 75, 414
SmoI CTYRAG 2 cut(s) 75, 414
Sse9I AATT 2 cut(s) 557, 594
SsiI CCGC 1 cut(s) 717
SspMI CTAG 2 cut(s) 83, 312
StyD4I CCNGG 3 cut(s) 582, 589, 699
TaaI ACNGT 4 cut(s) 567, 615, 637, 842
TaqI TCGA 1 cut(s) 483
TasI AATT 2 cut(s) 557, 594
TfiI GAWTC 2 cut(s) 68, 119
Tru1I TTAA 2 cut(s) 174, 204
Tru9I TTAA 2 cut(s) 174, 204
TscAI CASTG 2 cut(s) 829, 847
TseFI GTSAC 1 cut(s) 247
TseI GCWGC 1 cut(s) 810
Tsp45I GTSAC 1 cut(s) 247
TspRI CASTG 2 cut(s) 829, 847
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XspI CTAG 2 cut(s) 83, 312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.