Rmu_sc0002764.1_g000042
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002764.1
Physical Location & Seq
Reverse (-)
175502 .. 177378
1877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002764.1_g000042.1.cds

Sequence Viewer

Length: 450 bp
ctggtttctccaccgcccggagccatacttgagataagccaatcaccaactagtcctccaacccaaccagtcgcatcttccgccgcccaatccgggggcaataaattcatacgccggaatccggtcactagtccggagaccggattctggattcccgtgaccggtcaccggattccagtcactagtcgccggagtcaatcactggagtccccggccggccactggtcaccggagtccggcaaggtctccgatgacttctctcaagctttgaattcagtatttgagaaatggaagattcgggccaatccggagcaatggaacaaaaccggagacccatgcactggagctgccataaacgccaccaaatttgatgacaccgattacaaccccttaatcatatgtgactgctcttatcaatccagcaccatttgccacattacccaactgtaa

Protein Analysis

149

Amino Acids

16.11

Weight (kDa)

6.31

Isoelectric Point (pI)

82.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 341
AccIII TCCGGA 2 cut(s) 133, 307
AciI CCGC 3 cut(s) 14, 81, 84
AcoI YGGCCR 2 cut(s) 213, 217
AcsI RAATTY 3 cut(s) 104, 271, 365
AgeI ACCGGT 1 cut(s) 161
AgsI TTSAA 1 cut(s) 271
AhlI ACTAGT 3 cut(s) 50, 128, 182
AluBI AGCT 2 cut(s) 266, 347
AluI AGCT 2 cut(s) 266, 347
Alw26I GTCTC 3 cut(s) 131, 250, 324
Aor13HI TCCGGA 2 cut(s) 133, 307
AoxI GGCC 3 cut(s) 213, 217, 300
ApeKI GCWGC 1 cut(s) 347
ApoI RAATTY 3 cut(s) 104, 271, 365
AsiGI ACCGGT 1 cut(s) 161
AspS9I GGNCC 1 cut(s) 300
AsuC2I CCSGG 3 cut(s) 18, 94, 212
AsuHPI GGTGA 3 cut(s) 36, 158, 219
BbvI GCAGC 1 cut(s) 334
BcnI CCSGG 3 cut(s) 18, 94, 212
BcoDI GTCTC 3 cut(s) 131, 250, 324
BcuI ACTAGT 3 cut(s) 50, 128, 182
BfaI CTAG 3 cut(s) 51, 129, 183
BisI GCNGC 2 cut(s) 84, 348
BlsI GCNGC 2 cut(s) 85, 349
Bme1390I CCNGG 3 cut(s) 18, 94, 212
BmgT120I GGNCC 1 cut(s) 300
BmiI GGNNCC 1 cut(s) 22
BmrFI CCNGG 3 cut(s) 18, 94, 212
BmsI GCATC 1 cut(s) 83
BpmI CTGGAG 2 cut(s) 224, 363
BpuEI CTTGAG 2 cut(s) 50, 246
BpuMI CCSGG 3 cut(s) 18, 94, 212
BsaI GGTCTC 3 cut(s) 131, 250, 324
BsaJI CCNNGG 2 cut(s) 93, 210
BsaWI WCCGGW 8 cut(s) 121, 133, 140, 161, 168, 229, 307, 326
BsaXI ACNNNNNCTCC 2 cut(s) 40, 70
Bse118I RCCGGY 2 cut(s) 161, 215
Bse1I ACTGG 5 cut(s) 68, 176, 207, 227, 346
Bse3DI GCAATG 1 cut(s) 320
BseAI TCCGGA 2 cut(s) 133, 307
BseDI CCNNGG 2 cut(s) 93, 210
BseMI GCAATG 1 cut(s) 320
BseNI ACTGG 5 cut(s) 68, 176, 207, 227, 346
BseX3I CGGCCG 1 cut(s) 213
BseXI GCAGC 1 cut(s) 334
Bsh1285I CGRYCG 1 cut(s) 216
BshFI GGCC 3 cut(s) 215, 219, 302
BshTI ACCGGT 1 cut(s) 161
BsiEI CGRYCG 1 cut(s) 216
BslFI GGGAC 1 cut(s) 193
BsmAI GTCTC 3 cut(s) 131, 250, 324
BsmFI GGGAC 1 cut(s) 193
BsnI GGCC 3 cut(s) 215, 219, 302
Bso31I GGTCTC 3 cut(s) 131, 250, 324
Bsp13I TCCGGA 2 cut(s) 133, 307
BspACI CCGC 3 cut(s) 14, 81, 84
BspANI GGCC 3 cut(s) 215, 219, 302
BspEI TCCGGA 2 cut(s) 133, 307
BspLI GGNNCC 1 cut(s) 22
BspTNI GGTCTC 3 cut(s) 131, 250, 324
BsrDI GCAATG 1 cut(s) 320
BsrFI RCCGGY 2 cut(s) 161, 215
BsrI ACTGG 5 cut(s) 68, 176, 207, 227, 346
BssAI RCCGGY 2 cut(s) 161, 215
BssECI CCNNGG 2 cut(s) 93, 210
Bst4CI ACNGT 1 cut(s) 447
BstAPI GCANNNNNTGC 1 cut(s) 429
BstC8I GCNNGC 1 cut(s) 217
BstEII GGTNACC 2 cut(s) 164, 225
BstMAI GTCTC 3 cut(s) 131, 250, 324
BstMCI CGRYCG 1 cut(s) 216
BstMWI GCNNNNNNNGC 3 cut(s) 80, 356, 429
BstPI GGTNACC 2 cut(s) 164, 225
BstSCI CCNGG 3 cut(s) 16, 92, 210
BstV1I GCAGC 1 cut(s) 334
BstZI CGGCCG 1 cut(s) 213
BsuRI GGCC 3 cut(s) 215, 219, 302
BtsIMutI CAGTG 3 cut(s) 200, 220, 339
Cac8I GCNNGC 1 cut(s) 217
Cfr10I RCCGGY 2 cut(s) 161, 215
Cfr13I GGNCC 1 cut(s) 300
CspAI ACCGGT 1 cut(s) 161
CspCI CAANNNNNGTGG 2 cut(s) 349, 384
CviAII CATG 1 cut(s) 336
CviJI RGCY 7 cut(s) 23, 39, 215, 219, 266, 302, 347
CviKI_1 RGCY 7 cut(s) 23, 39, 215, 219, 266, 302, 347
EaeI YGGCCR 2 cut(s) 213, 217
EagI CGGCCG 1 cut(s) 213
EciI GGCGGA 1 cut(s) 70
EclXI CGGCCG 1 cut(s) 213
Eco31I GGTCTC 3 cut(s) 131, 250, 324
Eco52I CGGCCG 1 cut(s) 213
Eco91I GGTNACC 2 cut(s) 164, 225
EcoO65I GGTNACC 2 cut(s) 164, 225
EcoRI GAATTC 1 cut(s) 271
FaeI CATG 1 cut(s) 339
FaiI YATR 6 cut(s) 26, 110, 337, 353, 398, 400
FaqI GGGAC 1 cut(s) 193
FatI CATG 1 cut(s) 335
FauNDI CATATG 1 cut(s) 398
Fnu4HI GCNGC 2 cut(s) 84, 348
FseI GGCCGGCC 1 cut(s) 219
Fsp4HI GCNGC 2 cut(s) 84, 348
FspBI CTAG 3 cut(s) 51, 129, 183
GluI GCNGC 2 cut(s) 84, 348
GsuI CTGGAG 2 cut(s) 224, 363
HaeIII GGCC 3 cut(s) 215, 219, 302
Hin1II CATG 1 cut(s) 339
HindIII AAGCTT 1 cut(s) 264
HinfI GANTC 8 cut(s) 118, 144, 151, 172, 193, 206, 233, 295
HphI GGTGA 3 cut(s) 36, 158, 219
Hpy188I TCNGA 1 cut(s) 250
Hpy188III TCNNGA 3 cut(s) 134, 148, 308
HpyCH4III ACNGT 1 cut(s) 447
HpyCH4V TGCA 1 cut(s) 339
HpyF10VI GCNNNNNNNGC 3 cut(s) 80, 356, 429
Hsp92II CATG 1 cut(s) 339
Kpn2I TCCGGA 2 cut(s) 133, 307
KroI GCCGGC 1 cut(s) 215
KroNI GCCGGC 1 cut(s) 217
LmnI GCTCC 3 cut(s) 20, 310, 344
Lsp1109I GCAGC 1 cut(s) 334
LweI GCATC 1 cut(s) 83
MaeI CTAG 3 cut(s) 51, 129, 183
MaeIII GTNAC 6 cut(s) 124, 157, 164, 178, 225, 401
MboII GAAGA 2 cut(s) 69, 304
MluCI AATT 3 cut(s) 104, 271, 365
MlyI GAGTC 3 cut(s) 202, 215, 242
MmeI TCCRAC 1 cut(s) 83
MnlI CCTC 1 cut(s) 66
MroI TCCGGA 2 cut(s) 133, 307
MroNI GCCGGC 1 cut(s) 215
MseI TTAA 1 cut(s) 392
MspR9I CCNGG 3 cut(s) 18, 94, 212
MwoI GCNNNNNNNGC 3 cut(s) 80, 356, 429
NaeI GCCGGC 1 cut(s) 217
NciI CCSGG 3 cut(s) 18, 94, 212
NdeI CATATG 1 cut(s) 398
NgoMIV GCCGGC 1 cut(s) 215
NlaIII CATG 1 cut(s) 339
NlaIV GGNNCC 1 cut(s) 22
NmuCI GTSAC 6 cut(s) 124, 157, 164, 178, 225, 401
PdiI GCCGGC 1 cut(s) 217
PfeI GAWTC 5 cut(s) 118, 144, 151, 172, 295
PflMI CCANNNNNTGG 1 cut(s) 341
PinAI ACCGGT 1 cut(s) 161
PkrI GCNGC 2 cut(s) 85, 349
PleI GAGTC 3 cut(s) 201, 214, 241
PpsI GAGTC 3 cut(s) 201, 214, 241
PspEI GGTNACC 2 cut(s) 164, 225
PspN4I GGNNCC 1 cut(s) 22
PspPI GGNCC 1 cut(s) 300
RigI GGCCGGCC 1 cut(s) 219
SaqAI TTAA 1 cut(s) 392
SatI GCNGC 2 cut(s) 84, 348
Sau96I GGNCC 1 cut(s) 300
SchI GAGTC 3 cut(s) 202, 215, 242
ScrFI CCNGG 3 cut(s) 18, 94, 212
SetI ASST 3 cut(s) 246, 268, 349
SfaNI GCATC 1 cut(s) 83
SmlI CTYRAG 2 cut(s) 29, 261
SmoI CTYRAG 2 cut(s) 29, 261
SpeI ACTAGT 3 cut(s) 50, 128, 182
Sse9I AATT 3 cut(s) 104, 271, 365
SsiI CCGC 3 cut(s) 14, 81, 84
SspMI CTAG 3 cut(s) 51, 129, 183
StyD4I CCNGG 3 cut(s) 16, 92, 210
TaaI ACNGT 1 cut(s) 447
TasI AATT 3 cut(s) 104, 271, 365
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 5 cut(s) 118, 144, 151, 172, 295
Tru1I TTAA 1 cut(s) 392
Tru9I TTAA 1 cut(s) 392
TscAI CASTG 3 cut(s) 207, 227, 346
TseFI GTSAC 6 cut(s) 124, 157, 164, 178, 225, 401
TseI GCWGC 1 cut(s) 347
Tsp45I GTSAC 6 cut(s) 124, 157, 164, 178, 225, 401
TspDTI ATGAA 1 cut(s) 97
TspRI CASTG 3 cut(s) 207, 227, 346
Van91I CCANNNNNTGG 1 cut(s) 341
XapI RAATTY 3 cut(s) 104, 271, 365
XspI CTAG 3 cut(s) 51, 129, 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.