Rh5DG137200

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
13775343 .. 13784020
8678 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG137200.1

Sequence Viewer

Length: 3123 bp
ATGAAGCATTCTTCTCTATCATTACTATGCTTCTGCCTAGGCTATCTGGGTAGTTTCTGGTTTCACGTTTCCATGGCTCAAAATGCTACAAATGCTACTACGGACCCATCTGAAGTGTCGGCTTTGAACTCGATCTTCCAACAGTGGGGAGCACAGTCGGTGGCGCTGTGGAATATCAGTGGAGAGCCATGCAGTGGATCAGCCCTCAATGCAGATATATTTGAGAGCACTCCTAATAACCCTGCCATTACATGTGATTGTACCTTTGACAATAGTACCACCTGCCATATTACCCAACTGAGAGTTTATGCTCTAGACAAAACAGGAGGGCTTCCAGAAGAGCTTCTGGCTTTGAAATATCTGAAGTTTTTGAAAATAGATCAGAACTTTTTCACAGGCCCCTTACCCGCATGGATTGGCAATATGTCTGCATTGACGCTGTTGTCAATTGCCCACAATGCATTCTCTGGGCCGATCCCCAAGGAACTTGGAAATCTGAAGGACCTATATATGCTGTCCTTTGGATCAAATAATTTCTCTGGAACACTCCCTCCAGAACTTGGTAATCTAATCAAGCTCCAGCAACTTTACATAAACAGCTGTGGACTTACTGGTGAAATTCCTTCAACATTTGCTAACCTTCGTAACATGCAAATCCTTTGGGCATCAGACACTCCTTTCTCTGGAAAGATACCTGATTTCATTGGGAATTGGACGAAGCTAAACTCACTGAGACTTCAAGGAAACTCTTTAGAAGGCCCAATACCAACCAATTTTTCTCAGTTGACCTCATTGAATTCCCTGCGAATCAGTGATATATACAATGGGAGCTCGTCCTCTCTTGGTTTCATAAAAAATTTGAAGAACTTGACTGATTTAGTTCTACGAAATGCATTGATTACTGGTAGCCTACCTTCTGATATTGCAGAATATCCAAGATTACAGATACTGGATTTGAGTTTCAACAATTTGACAGGCCAACTCCCAAATGGCTTGTTTAACATGAGTTCGCTTACATACTTATTTCTGGGGAACAATAGTCTGTCTGGATCACTTCCTAACCAAAAGACCAGTATACTTCAGAACGTAGAATTGTCTTACAACTATTTATCAGGGAGTCTTCCTCCATGGGTAACCTCAACAGCGCAACTGAACTTAGTGGTGAACAACTTCACCTTTGACAGTTCAAACACAGCTCTTCCTGGGTTGAATTGCCTTCAGAGAAATTTTCCATGCAATAGAAATGCCCCACGATATGCAAATTTTTCAATCAAGTGTGGTGGACAAGAACTTAGAGGAAGTGATGGTATATTGTATGAGGCAGAAAACTCAACTCTTGGCCCAGCTACATTTAGTGTAACCAGTACAGAGAAATGGGCGGTAAGCAATGCGGGTTTGTTTGCTGACAGAAAGAATCCAGACTATGTGGTGAATACCCTGGCACAAGTCACTGGGACAGATGTGACCCCAGAGCTTTTCCAGACCTCAAGATTGTCTCCCGGATCACTGAGGTACTTCGGCCTGGGTCTGGAGAATGGGCCTTATACTGTAACATTGCAATTTGCAGAAACTGTTTTTTTAGATCGTACCTTACAAACATGGAAAAGTCTTGGTCGGCGCCTATTTGATATCTACATTCAGGGGGATCTAAAATGGAAGGACTTTGACATCTCGAAGGAGGCAGGTGGAGTTTTCAGAGCTGTTGCTAGAAACTTCAATGTTAATGTGTCAGAAAATTATCTTGACATTCATCTGTTCTGGGCTGGTAAGGGGACCTGCTGCATACCCGAACAAGGTGATTATGGCCCTCTAATATCAGCAGTTAAAGTTGTTCCAGAATTTACTCCAACTGTTTCTGGGATTCCACCAACTACTCCAGGAAAGAAGAGCAAGACAGGACTAATAGTTGGTATTGCAGTTCCTCTTGGAGTTGTGGGCTTGCTGTTAATATTTTCAGTTCTATATTTGAGGAGGAAAAAAGCAGAAAAATATGACGATGAAGACCTTCTAGCACTAGAGAACAGACCAAATACTTTCAGTTATTCCGAGTTGAAAGAAGCAACAGCAGATTTTAATCCTTCAAATAAGCTAGGAGAGGGAGGATATGGCCCTGTTTACAAGGGTACACTTTCCGATGGGAGGGTAGTGGCTGTGAAGCAACTTTCAGTGGCATCTCACCAAGGGAAGAGTCAATTTGGTGCAGAAATTGCTACTATATCTGCAGTGCAACATCGCAATCTAGTGAAATTGTATGGATGCTGTATCGAAGGAAGCCAGCGAATTTTGGTTTATGAATATCTTGAAAACAAGAGCCTTGATCAAGCACTTTTTGGAACAAATGACCTGCACCTTGACTGGCTTACACGCTTCAATATAATGTTGGGAACAGCAAGAGGACTTGCTTATCTTCATGAGGAGTCAAGCCCAAGGATTGTGCATAGAGATGTCAAAGCCAGTAATATTTTGCTCGACGCAGAACTCTGCCCAAAAATATCAGATTTTGGATTAGCAAAGCTATATGATGATGACAAAACCCATATCAGTACCCGAGTTGCAGGGACAATAGGCTATTTGGCACCAGAGTATGCAATGCGTGGACATCTGACCGAAAAGGCTGATGTTTTCAGTTTTGGGGTTGTTGTTTTGGAGATTCTCAGCGGAAGACCAAATGCTGACAGTGATTTGGATGCTGGAAAGACTTATCTCCTTGAATGGGCTTGGACTCTGCATGAAAATAACAAGACTTTGGAGTTGGTGGATCCCAGATTGACAGATTTTGATGATCAAGAAGCCATTAGGTTCATAAAAGTAGCTTTCCAATGCACACAGGGACCGCCAATGACGCGGCCATCTATGTCACGCGTGGTTGGGATGCTTTCTGGAGATATTGAATTAGGCAGTACTGTCATGTCAAAGCCAAGTTATTTGACAGATTGGGACTATAAAGATGTAACAACAAGTAGCTTTTTGATTGATCGCGATACACCATCAACTGATAGTAAGAGTGAGCTCAACCTTCAGCCCGGCAGCACAACTGGTGCTAGCACCGATATTGACCTTTATCCATCTCATGTGGAAGTTAATCGATCAATGGTCACCGACATTATAAGAGAAGGAAGGTAA

Protein Analysis

1040

Amino Acids

114.18

Weight (kDa)

5.41

Isoelectric Point (pI)

31.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 92 - 199 4.3e-09 Leucine-rich repeat region
LRR_14 PF23598 182 - 270 4e-08 Leucine-rich repeat region
Malectin PF11721 422 - 608 3.7e-37 Malectin domain
Pkinase PF00069 693 - 955 9.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 694 - 956 3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3107
AarI CACCTGC 2 cut(s) 290, 1673
AasI GACNNNNNNGTC 1 cut(s) 442
Acc36I ACCTGC 4 cut(s) 290, 1673, 1784, 2352
AccB1I GGYRCC 2 cut(s) 1617, 2575
AccB7I CCANNNNNTGG 2 cut(s) 194, 560
AccI GTMKAC 1 cut(s) 1075
AccII CGCG 3 cut(s) 2845, 2862, 2979
AciI CCGC 6 cut(s) 408, 1379, 1391, 2658, 2834, 2845
AclWI GGATC 8 cut(s) 205, 469, 532, 1057, 1510, 1653, 2753, 2766
AcoI YGGCCR 1 cut(s) 2846
AcsI RAATTY 7 cut(s) 618, 796, 856, 1225, 1261, 1838, 2280
AcuI CTGAAG 6 cut(s) 132, 383, 518, 1064, 1202, 3002
AcyI GRCGYC 1 cut(s) 1618
AfaI GTAC 8 cut(s) 262, 277, 1366, 1514, 1588, 2125, 2545, 2902
AfiI CCNNNNNNNGG 8 cut(s) 145, 194, 560, 683, 1528, 1793, 2139, 2713
AflIII ACRYGT 2 cut(s) 251, 2860
AjnI CCWGG 4 cut(s) 1201, 1437, 1521, 1876
AjuI GAANNNNNNNTTGG 2 cut(s) 760, 792
AloI GAACNNNNNNTCC 2 cut(s) 535, 567
Alw21I GWGCWC 4 cut(s) 154, 230, 833, 3012
Alw26I GTCTC 2 cut(s) 727, 1500
AlwI GGATC 8 cut(s) 205, 469, 532, 1057, 1510, 1653, 2753, 2766
AlwNI CAGNNNCTG 2 cut(s) 949, 1571
Ama87I CYCGRG 1 cut(s) 2547
ApeKI GCWGC 2 cut(s) 1779, 3027
ApoI RAATTY 7 cut(s) 618, 796, 856, 1225, 1261, 1838, 2280
Asp700I GAANNNNTTC 4 cut(s) 342, 389, 1169, 2004
AspA2I CCTAGG 1 cut(s) 37
AspLEI GCGC 3 cut(s) 166, 1147, 1620
AsuC2I CCSGG 2 cut(s) 1500, 3024
AsuHPI GGTGA 7 cut(s) 626, 1165, 1174, 1441, 1808, 2168, 3088
AsuNHI GCTAGC 1 cut(s) 3041
AvaI CYCGRG 1 cut(s) 2547
AvaII GGWCC 4 cut(s) 103, 502, 1773, 2831
AvrII CCTAGG 1 cut(s) 37
BaeI ACNNNNGTAYC 2 cut(s) 259, 292
BamHI GGATCC 1 cut(s) 2758
BanI GGYRCC 2 cut(s) 1617, 2575
BanII GRGCYC 2 cut(s) 833, 3012
BarI GAAGNNNNNNTAC 4 cut(s) 747, 779, 898, 930
BbsI GAAGAC 3 cut(s) 1112, 2007, 2668
Bbv12I GWGCWC 4 cut(s) 154, 230, 833, 3012
BbvI GCAGC 2 cut(s) 1766, 3039
BccI CCATC 6 cut(s) 115, 1298, 2129, 2857, 2995, 3073
BciT130I CCWGG 4 cut(s) 1203, 1439, 1523, 1878
BclI TGATCA 2 cut(s) 2317, 2782
BcnI CCSGG 2 cut(s) 1500, 3024
BcoDI GTCTC 2 cut(s) 727, 1500
BfaI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 3042
BfmI CTRYAG 1 cut(s) 2220
BfoI RGCGCY 2 cut(s) 167, 1621
BfuAI ACCTGC 4 cut(s) 290, 1673, 1784, 2352
BisI GCNGC 3 cut(s) 1780, 2846, 3028
BlnI CCTAGG 1 cut(s) 37
BlsI GCNGC 3 cut(s) 1781, 2847, 3029
BmcAI AGTACT 1 cut(s) 2902
Bme1390I CCNGG 6 cut(s) 1203, 1439, 1500, 1523, 1878, 3024
Bme18I GGWCC 4 cut(s) 103, 502, 1773, 2831
BmeT110I CYCGRG 1 cut(s) 2547
BmiI GGNNCC 7 cut(s) 105, 400, 1619, 1774, 2577, 2760, 2832
BmrFI CCNGG 6 cut(s) 1203, 1439, 1500, 1523, 1878, 3024
BmrI ACTGGG 1 cut(s) 1461
BmsI GCATC 5 cut(s) 674, 2180, 2246, 2677, 2862
BmtI GCTAGC 1 cut(s) 3045
BmuI ACTGGG 1 cut(s) 1461
BpiI GAAGAC 3 cut(s) 1112, 2007, 2668
BplI GAGNNNNNCTC 2 cut(s) 1108, 1140
BpmI CTGGAG 5 cut(s) 537, 563, 1550, 1860, 2901
BpuEI CTTGAG 1 cut(s) 1471
BpuMI CCSGG 2 cut(s) 1500, 3024
Bsa29I ATCGAT 1 cut(s) 3085
BsaBI GATNNNNATC 1 cut(s) 2073
BsaHI GRCGYC 1 cut(s) 1618
BsaJI CCNNGG 9 cut(s) 37, 72, 480, 1127, 1202, 1437, 1522, 2179, 2426
BsaXI ACNNNNNCTCC 2 cut(s) 535, 565
Bsc4I CCNNNNNNNGG 8 cut(s) 145, 194, 560, 683, 1528, 1793, 2139, 2713
Bse1I ACTGG 9 cut(s) 616, 907, 954, 1071, 1362, 1456, 2360, 2454, 3040
Bse3DI GCAATG 3 cut(s) 1393, 1553, 2595
Bse8I GATNNNNATC 1 cut(s) 2073
BseBI CCWGG 4 cut(s) 1203, 1439, 1523, 1878
BseCI ATCGAT 1 cut(s) 3085
BseDI CCNNGG 9 cut(s) 37, 72, 480, 1127, 1202, 1437, 1522, 2179, 2426
BseGI GGATG 3 cut(s) 2261, 2692, 2877
BseJI GATNNNNATC 1 cut(s) 2073
BseLI CCNNNNNNNGG 8 cut(s) 145, 194, 560, 683, 1528, 1793, 2139, 2713
BseMI GCAATG 3 cut(s) 1393, 1553, 2595
BseMII CTCAG 5 cut(s) 290, 722, 794, 1499, 2668
BseNI ACTGG 9 cut(s) 616, 907, 954, 1071, 1362, 1456, 2360, 2454, 3040
BseRI GAGGAG 2 cut(s) 1984, 2429
BseXI GCAGC 2 cut(s) 1766, 3039
BseYI CCCAGC 1 cut(s) 1342
BsgI GTGCAG 2 cut(s) 2220, 2330
Bsh1236I CGCG 3 cut(s) 2845, 2862, 2979
BshNI GGYRCC 2 cut(s) 1617, 2575
BshVI ATCGAT 1 cut(s) 3085
BsiHKAI GWGCWC 4 cut(s) 154, 230, 833, 3012
BsiHKCI CYCGRG 1 cut(s) 2547
BsiSI CCGG 2 cut(s) 1500, 3024
BslFI GGGAC 5 cut(s) 1468, 1786, 2572, 2844, 2951
BslI CCNNNNNNNGG 8 cut(s) 145, 194, 560, 683, 1528, 1793, 2139, 2713
BsmAI GTCTC 2 cut(s) 727, 1500
BsmFI GGGAC 5 cut(s) 1468, 1786, 2572, 2844, 2951
BsmI GAATGC 2 cut(s) 7, 461
BsoBI CYCGRG 1 cut(s) 2547
Bsp1286I GDGCHC 4 cut(s) 154, 230, 833, 3012
Bsp19I CCATGG 2 cut(s) 72, 1127
Bsp68I TCGCGA 1 cut(s) 2979
BspACI CCGC 6 cut(s) 408, 1379, 1391, 2658, 2834, 2845
BspCNI CTCAG 5 cut(s) 291, 723, 793, 1500, 2667
BspDI ATCGAT 1 cut(s) 3085
BspFNI CGCG 3 cut(s) 2845, 2862, 2979
BspHI TCATGA 1 cut(s) 2410
BspLI GGNNCC 7 cut(s) 105, 400, 1619, 1774, 2577, 2760, 2832
BspMAI CTGCAG 1 cut(s) 2224
BspMI ACCTGC 4 cut(s) 290, 1673, 1784, 2352
BspOI GCTAGC 1 cut(s) 3045
BspPI GGATC 8 cut(s) 205, 469, 532, 1057, 1510, 1653, 2753, 2766
BspQI GCTCTTC 3 cut(s) 333, 1203, 1880
BspT107I GGYRCC 2 cut(s) 1617, 2575
BsrDI GCAATG 3 cut(s) 1393, 1553, 2595
BsrI ACTGG 9 cut(s) 616, 907, 954, 1071, 1362, 1456, 2360, 2454, 3040
BssECI CCNNGG 9 cut(s) 37, 72, 480, 1127, 1202, 1437, 1522, 2179, 2426
BssNAI GTATAC 1 cut(s) 1076
BssNI GRCGYC 1 cut(s) 1618
BssT1I CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
Bst1107I GTATAC 1 cut(s) 1076
Bst2UI CCWGG 4 cut(s) 1203, 1439, 1523, 1878
Bst4CI ACNGT 8 cut(s) 144, 156, 1184, 1549, 1573, 1852, 2678, 2905
Bst6I CTCTTC 4 cut(s) 333, 1203, 1880, 2180
BstACI GRCGYC 1 cut(s) 1618
BstAPI GCANNNNNTGC 1 cut(s) 2207
BstC8I GCNNGC 3 cut(s) 1940, 2276, 3043
BstDEI CTNAG 7 cut(s) 299, 731, 780, 1156, 1292, 1508, 2654
BstDSI CCRYGG 2 cut(s) 72, 1127
BstEII GGTNACC 2 cut(s) 1132, 3094
BstF5I GGATG 3 cut(s) 2261, 2692, 2877
BstFNI CGCG 3 cut(s) 2845, 2862, 2979
BstH2I RGCGCY 2 cut(s) 167, 1621
BstHHI GCGC 3 cut(s) 166, 1147, 1620
BstMAI GTCTC 2 cut(s) 727, 1500
BstMWI GCNNNNNNNGC 6 cut(s) 83, 92, 209, 458, 2207, 2842
BstNI CCWGG 4 cut(s) 1203, 1439, 1523, 1878
BstNSI RCATGY 2 cut(s) 255, 652
BstPI GGTNACC 2 cut(s) 1132, 3094
BstSCI CCNGG 6 cut(s) 1201, 1437, 1498, 1521, 1876, 3022
BstSFI CTRYAG 1 cut(s) 2220
BstUI CGCG 3 cut(s) 2845, 2862, 2979
BstV1I GCAGC 2 cut(s) 1766, 3039
BstV2I GAAGAC 3 cut(s) 1112, 2007, 2668
BstX2I RGATCY 2 cut(s) 1645, 2758
BstYI RGATCY 2 cut(s) 1645, 2758
BstZ17I GTATAC 1 cut(s) 1076
Bsu15I ATCGAT 1 cut(s) 3085
BsuTUI ATCGAT 1 cut(s) 3085
BtgI CCRYGG 2 cut(s) 72, 1127
BtgZI GCGATG 1 cut(s) 2216
BtsCI GGATG 3 cut(s) 2261, 2692, 2877
BtsI GCAGTG 2 cut(s) 199, 2229
BtuMI TCGCGA 1 cut(s) 2979
BveI ACCTGC 4 cut(s) 290, 1673, 1784, 2352
Cac8I GCNNGC 3 cut(s) 1940, 2276, 3043
CaiI CAGNNNCTG 2 cut(s) 949, 1571
CciI TCATGA 1 cut(s) 2410
CfoI GCGC 3 cut(s) 166, 1147, 1620
ClaI ATCGAT 1 cut(s) 3085
CseI GACGC 3 cut(s) 445, 2480, 2851
Csp6I GTAC 8 cut(s) 261, 276, 1365, 1513, 1587, 2124, 2544, 2901
CspCI CAANNNNNGTGG 2 cut(s) 1261, 1296
CviQI GTAC 8 cut(s) 261, 276, 1365, 1513, 1587, 2124, 2544, 2901
DdeI CTNAG 7 cut(s) 299, 731, 780, 1156, 1292, 1508, 2654
DinI GGCGCC 1 cut(s) 1619
DrdI GACNNNNNNGTC 1 cut(s) 442
DseDI GACNNNNNNGTC 1 cut(s) 442
EaeI YGGCCR 1 cut(s) 2846
Eam1104I CTCTTC 4 cut(s) 333, 1203, 1880, 2180
EarI CTCTTC 4 cut(s) 333, 1203, 1880, 2180
Ecl136II GAGCTC 2 cut(s) 831, 3010
Eco130I CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
Eco24I GRGCYC 2 cut(s) 833, 3012
Eco32I GATATC 1 cut(s) 1630
Eco47I GGWCC 4 cut(s) 103, 502, 1773, 2831
Eco53kI GAGCTC 2 cut(s) 831, 3010
Eco57I CTGAAG 6 cut(s) 132, 383, 518, 1064, 1202, 3002
Eco88I CYCGRG 1 cut(s) 2547
Eco91I GGTNACC 2 cut(s) 1132, 3094
EcoICRI GAGCTC 2 cut(s) 831, 3010
EcoO109I RGGNCCY 3 cut(s) 398, 502, 1773
EcoO65I GGTNACC 2 cut(s) 1132, 3094
EcoRI GAATTC 1 cut(s) 796
EcoRII CCWGG 4 cut(s) 1201, 1437, 1521, 1876
EcoRV GATATC 1 cut(s) 1630
EcoT14I CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
EcoT22I ATGCAT 2 cut(s) 463, 895
EcoT38I GRGCYC 2 cut(s) 833, 3012
EgeI GGCGCC 1 cut(s) 1619
EheI GGCGCC 1 cut(s) 1619
ErhI CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
FaqI GGGAC 5 cut(s) 1468, 1786, 2572, 2844, 2951
FauI CCCGC 2 cut(s) 415, 1384
FbaI TGATCA 2 cut(s) 2317, 2782
FblI GTMKAC 1 cut(s) 1075
Fnu4HI GCNGC 3 cut(s) 1780, 2846, 3028
FokI GGATG 3 cut(s) 2268, 2699, 2884
FriOI GRGCYC 2 cut(s) 833, 3012
Fsp4HI GCNGC 3 cut(s) 1780, 2846, 3028
FspBI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 3042
GlaI GCGC 3 cut(s) 165, 1146, 1619
GluI GCNGC 3 cut(s) 1780, 2846, 3028
GsaI CCCAGC 1 cut(s) 1346
GsuI CTGGAG 5 cut(s) 537, 563, 1550, 1860, 2901
HaeII RGCGCY 2 cut(s) 167, 1621
HapII CCGG 2 cut(s) 1500, 3024
HgaI GACGC 3 cut(s) 445, 2480, 2851
HhaI GCGC 3 cut(s) 166, 1147, 1620
Hin1I GRCGYC 1 cut(s) 1618
Hin6I GCGC 3 cut(s) 164, 1145, 1618
HinP1I GCGC 3 cut(s) 164, 1145, 1618
HincII GTYRAC 1 cut(s) 786
HindII GTYRAC 1 cut(s) 786
HinfI GANTC 8 cut(s) 807, 1117, 1414, 1861, 2188, 2417, 2650, 2722
HpaII CCGG 2 cut(s) 1500, 3024
HphI GGTGA 7 cut(s) 626, 1165, 1174, 1441, 1808, 2168, 3088
Hpy166II GTNNAC 8 cut(s) 605, 786, 1076, 1165, 1283, 2116, 2126, 2597
Hpy8I GTNNAC 8 cut(s) 605, 786, 1076, 1165, 1283, 2116, 2126, 2597
Hpy99I CGWCG 1 cut(s) 2474
HpyCH4III ACNGT 8 cut(s) 144, 156, 1184, 1549, 1573, 1852, 2678, 2905
HpyCH4IV ACGT 2 cut(s) 66, 1086
HpyF10VI GCNNNNNNNGC 6 cut(s) 83, 92, 209, 458, 2207, 2842
HpyF3I CTNAG 7 cut(s) 299, 731, 780, 1156, 1292, 1508, 2654
HpySE526I ACGT 2 cut(s) 66, 1086
Hsp92I GRCGYC 1 cut(s) 1618
HspAI GCGC 3 cut(s) 164, 1145, 1618
KasI GGCGCC 1 cut(s) 1617
Ksp22I TGATCA 2 cut(s) 2317, 2782
LguI GCTCTTC 3 cut(s) 333, 1203, 1880
LmnI GCTCC 3 cut(s) 149, 582, 828
Lsp1109I GCAGC 2 cut(s) 1766, 3039
LweI GCATC 5 cut(s) 674, 2180, 2246, 2677, 2862
MaeI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 3042
MaeII ACGT 2 cut(s) 66, 1086
MaeIII GTNAC 9 cut(s) 644, 1132, 1357, 1447, 1462, 1549, 2856, 2950, 3094
MfeI CAATTG 1 cut(s) 447
MflI RGATCY 2 cut(s) 1645, 2758
MhlI GDGCHC 4 cut(s) 154, 230, 833, 3012
MluI ACGCGT 1 cut(s) 2860
Mly113I GGCGCC 1 cut(s) 1618
MlyI GAGTC 4 cut(s) 1126, 2197, 2426, 2716
MmeI TCCRAC 2 cut(s) 163, 1871
Mph1103I ATGCAT 2 cut(s) 463, 895
MroXI GAANNNNTTC 4 cut(s) 342, 389, 1169, 2004
MseI TTAA 6 cut(s) 999, 1722, 1824, 1946, 2073, 3081
MslI CAYNNNNRTG 2 cut(s) 25, 2442
MspA1I CMGCKG 2 cut(s) 600, 2658
MspI CCGG 2 cut(s) 1500, 3024
MspR9I CCNGG 6 cut(s) 1203, 1439, 1500, 1523, 1878, 3024
MunI CAATTG 1 cut(s) 447
Mva1269I GAATGC 2 cut(s) 7, 461
MvaI CCWGG 4 cut(s) 1203, 1439, 1523, 1878
MvnI CGCG 3 cut(s) 2845, 2862, 2979
MwoI GCNNNNNNNGC 6 cut(s) 83, 92, 209, 458, 2207, 2842
NarI GGCGCC 1 cut(s) 1618
NciI CCSGG 2 cut(s) 1500, 3024
NcoI CCATGG 2 cut(s) 72, 1127
NheI GCTAGC 1 cut(s) 3041
NlaIV GGNNCC 7 cut(s) 105, 400, 1619, 1774, 2577, 2760, 2832
NmuCI GTSAC 4 cut(s) 1447, 1462, 2856, 3094
NruI TCGCGA 1 cut(s) 2979
NsiI ATGCAT 2 cut(s) 463, 895
NspI RCATGY 2 cut(s) 255, 652
PagI TCATGA 1 cut(s) 2410
PaqCI CACCTGC 2 cut(s) 290, 1673
PciI ACATGT 1 cut(s) 251
PciSI GCTCTTC 3 cut(s) 333, 1203, 1880
PctI GAATGC 2 cut(s) 7, 461
PdmI GAANNNNTTC 4 cut(s) 342, 389, 1169, 2004
PfeI GAWTC 4 cut(s) 807, 1414, 1861, 2650
PflMI CCANNNNNTGG 2 cut(s) 194, 560
PfoI TCCNGGA 2 cut(s) 1498, 1876
PkrI GCNGC 3 cut(s) 1781, 2847, 3029
PleI GAGTC 4 cut(s) 1125, 2196, 2425, 2716
PluTI GGCGCC 1 cut(s) 1621
PpsI GAGTC 4 cut(s) 1125, 2196, 2425, 2716
PpuMI RGGWCCY 2 cut(s) 502, 1773
PscI ACATGT 1 cut(s) 251
PsiI TTATAA 1 cut(s) 3107
Psp124BI GAGCTC 2 cut(s) 833, 3012
Psp5II RGGWCCY 2 cut(s) 502, 1773
Psp6I CCWGG 4 cut(s) 1201, 1437, 1521, 1876
PspEI GGTNACC 2 cut(s) 1132, 3094
PspFI CCCAGC 1 cut(s) 1342
PspGI CCWGG 4 cut(s) 1201, 1437, 1521, 1876
PspN4I GGNNCC 7 cut(s) 105, 400, 1619, 1774, 2577, 2760, 2832
PspPPI RGGWCCY 2 cut(s) 502, 1773
PstI CTGCAG 1 cut(s) 2224
PstNI CAGNNNCTG 2 cut(s) 949, 1571
PsuI RGATCY 2 cut(s) 1645, 2758
PvuII CAGCTG 1 cut(s) 600
RruI TCGCGA 1 cut(s) 2979
RsaI GTAC 8 cut(s) 262, 277, 1366, 1514, 1588, 2125, 2545, 2902
RsaNI GTAC 8 cut(s) 261, 276, 1365, 1513, 1587, 2124, 2544, 2901
RseI CAYNNNNRTG 2 cut(s) 25, 2442
SacI GAGCTC 2 cut(s) 833, 3012
SapI GCTCTTC 3 cut(s) 333, 1203, 1880
SaqAI TTAA 6 cut(s) 999, 1722, 1824, 1946, 2073, 3081
SatI GCNGC 3 cut(s) 1780, 2846, 3028
ScaI AGTACT 1 cut(s) 2902
SchI GAGTC 4 cut(s) 1126, 2197, 2426, 2716
ScrFI CCNGG 6 cut(s) 1203, 1439, 1500, 1523, 1878, 3024
SduI GDGCHC 4 cut(s) 154, 230, 833, 3012
SfaNI GCATC 5 cut(s) 674, 2180, 2246, 2677, 2862
SfcI CTRYAG 1 cut(s) 2220
SfoI GGCGCC 1 cut(s) 1619
SinI GGWCC 4 cut(s) 103, 502, 1773, 2831
SmiMI CAYNNNNRTG 2 cut(s) 25, 2442
SmlI CTYRAG 1 cut(s) 1486
SmoI CTYRAG 1 cut(s) 1486
SsiI CCGC 6 cut(s) 408, 1379, 1391, 2658, 2834, 2845
SspDI GGCGCC 1 cut(s) 1617
SspI AATATT 2 cut(s) 1950, 2461
SspMI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 3042
SstI GAGCTC 2 cut(s) 833, 3012
StyD4I CCNGG 6 cut(s) 1201, 1437, 1498, 1521, 1876, 3022
StyI CCWWGG 6 cut(s) 37, 72, 480, 1127, 2179, 2426
TaaI ACNGT 8 cut(s) 144, 156, 1184, 1549, 1573, 1852, 2678, 2905
TaiI ACGT 2 cut(s) 69, 1089
TaqI TCGA 5 cut(s) 131, 1673, 2265, 2469, 3085
TaqII GACCGA 1 cut(s) 2621
TatI WGTACW 2 cut(s) 1364, 2900
TauI GCSGC 1 cut(s) 2848
TfiI GAWTC 4 cut(s) 807, 1414, 1861, 2650
Tru1I TTAA 6 cut(s) 999, 1722, 1824, 1946, 2073, 3081
Tru9I TTAA 6 cut(s) 999, 1722, 1824, 1946, 2073, 3081
TseFI GTSAC 4 cut(s) 1447, 1462, 2856, 3094
TseI GCWGC 2 cut(s) 1779, 3027
Tsp45I GTSAC 4 cut(s) 1447, 1462, 2856, 3094
TspDTI ATGAA 9 cut(s) 17, 691, 838, 1739, 2013, 2307, 2399, 2745, 2791
TspGWI ACGGA 1 cut(s) 116
Van91I CCANNNNNTGG 2 cut(s) 194, 560
VpaK11BI GGWCC 4 cut(s) 103, 502, 1773, 2831
XapI RAATTY 7 cut(s) 618, 796, 856, 1225, 1261, 1838, 2280
XbaI TCTAGA 1 cut(s) 313
XceI RCATGY 2 cut(s) 255, 652
XcmI CCANNNNNNNNNTGG 1 cut(s) 986
XmaJI CCTAGG 1 cut(s) 37
XmiI GTMKAC 1 cut(s) 1075
XmnI GAANNNNTTC 4 cut(s) 342, 389, 1169, 2004
XspI CTAG 8 cut(s) 38, 314, 1707, 2009, 2015, 2090, 2240, 3042
ZrmI AGTACT 1 cut(s) 2902
Zsp2I ATGCAT 2 cut(s) 463, 895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.