Rroxscaffold_2G00130350
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
66489935 .. 66499329
9395 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00130350.1

Sequence Viewer

Length: 3027 bp
ATGTCAGGAACTGCTTCCCCATCAGTTTTGGTCTTATTTTTGTTCATCTCTGGTGTAGCACAAGCTCAAGTTTCTGCTCCTACTCCTGCTCCGCAACCTGAAGCCACTAATGCCACCACTGACCCATCTCAAGCAAGAGTTTTGAATTCAGTGTTTGAGAAATGGAATATTCGGGCCAATCCGAAGCAATGGAACACAACCGGAGACCCATGCAGTGGAGCTGCCATAGACTCCACCAGTCACTCCACCAAATTTGATGATCCCGCTTACAACCCCTTCATCATATGTGACTGCTCTTATCAATCCGGCACCATTTGCCACATTACCCAACTGAAAGTTCAGAACTTGGGAGTTGTTGGTGTAATTCCAGACGAGTTATGGAGTTTGACTTCCCTCACCAATCTGAATTTGGAAAGGAATTGCCTGACAGGACCTCTCTCTGCAGCCATTGCAAATCTAACTGGCTTGCAATACTTTACTATTGGCATCAACGATTTATCAGGCGAGATACCAAAAGAAATTGGACAACTTACTGAACTGAGATCATTGTCTTTTGGGAGAAACAACTTTTCGGGTTCTCTGCCATCTGAGCTAGGGAATTTATTCAAATTACAACAGCTTTGGGCTAGAGAAGTTGAACTCTCTGGCAGGATACCAGACTTCATAGGGAATTTGTCAAAGCTTACTTCCTTGAGGTTTCAAGGAAACTCTTTCGAAGGTCCTATACCATTTGCATTTTCCAATCTGACATCTATTAAAGAGATATACATTAGTGATTTGTCGAATGCCAATGGGAGCTCTTCTCTTGCGTTTATTGAGAATATGAAGGCTCTAAATATCTTGGTGCTGAGGAATAACAATATTTCTGATTCAATTCCTTCCGATTTTGGATTGTACCAAAGTTTGTCTCAGCTGTTTCTTGGAAACAATAAGTTGAATGGCACCCTTCCCGAGTATAAGACAGCATCTCTTCTCAATATAGATTTGTCGTACAATTATCTAGATGGGAGCATTCCTTCTTGGGTCAAAGAAGAAAAATTACAGCTTAATTTAGTTGCCAACAACTTCAGCATAGAAAGTTTACAGAGCAGTGGTCTTCCTTCAGGGTTGGCTTGCCTTCAAAGAAACTTTCCTTGCAATCGTGGCCCTGGAATCTATTATAATTTTGGGATTAATTGTGGAGGACCTGAGTTTACGTCTTCCTCTGATGGGATTGTGTATGAGAAGGAAAATGAGCCCCTTGGACCAGCTTCATATTTTGTGACTGGCACAGGCAGATGGGGAGTTAGCAATGTCGGATATTTCGCTGGCAGTGCCAATCCTCAGTATACAAGCTTCTCCTTATCTCAATTCACAAATACTTTTGATTCTGTGCTATTCCAGACTGCAAGGCTCTCTGCTTCATCAATTAGATACTTTGGCTTGGGGCTTGAGAATGGTAACTACACCGTGAACCTCAAGTTTGCAGAACATGTCATTCTGGCTGCTTCTTCCGGGAAATTTCTTGGGAGACGTCTTTTTGATATTTATATCCAGGGCATTCTGGTATCAAAGAATTTTGATATACTAAAGGAGGCAGGTATGTCATCTTTCGGAGCTGTTCAGAAGCCATACACGGCTCATGTTTCGGAGAACTACCTTGAAATCCATCTCTTTTGGGCTGGAAAGGGGACTTGCTGTATACCTGAGCGGGGTACTTATGGACCTGCTATTGCAGCCATCAGTGCTACACCGGATTTCATACCTACTGTCAGTAACAACCCTCCAACTAGTAAGAAGAATAGAACTGGGCTGATTGTTGGGATTGTTGTGGGTGGTGGAGTACTTTTGGTTCTGTTGTTTGTGGCTTTTTATCTTATTCTAAGAAGAACAAGATCTGACCCTGATGATGACGAAGAGCTGTATGGGATAGATGTTGGACCACTTACTTTCAGTTATCCTGAACTAAAGTCAGCTACAAACGACTTTGATGAAGCTCATAAGCTTGGAGAGGGAGGATTTGGACCTGTCTATAGAGGAACACTTAGTGATGGAAGAGTAATTGCTGTGAAGCAATTGTCTGCAGCATCCCACCAAGGAAAGAACCAGTTTGTAACTGAGATTGCCACTATATCTGCTGTGCAACACAATAACCTGGTAAAGTTGTACGGATTCTGCACTGAGGGAGTTAAAAGGCTCCTTGTCTATGAGTATCTGGAGAACAACAGTCTTGATCAAGCATTATTTGGAGAGAGATGTTTAAATCTTGATTGGTCAACACGTTTTAATATATGCTTGGGCATAGCTAGAGGTTTAACTTATCTTCACGAAGAATCAAGGGTTCGAATTGTACACAGAGATGTGAAGGCCAGTAATATTCTGCTTGACACTAATCTGATCCCCAAGATATCGGATTTTGGTTTGGCTAAGCTTTTTGATGAGAAAAAGACCCACATAAGTACCCGTGTTGCAGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACCTTACAGAGAAGACTGATGTCTTTGCCTTTGGTGTTGTGGCTCTTGAAATTGTCAGTGGTAGGCCAAATTCTGATCCGAGTTTGGGTGAAGAAATGACTTATCTTCTCGAATGGGCTTGGCAATTGCATGAAAACAGACGGGCAGTTGAACTAGTGGACTCTAGATTATCTGAATTCAATGAGGAAGAAGCACAACGAATAATCAAAATAGGACTTTTGTGCACTCAAACATCACCAATGCTACGACCATCCATGTCCCGTGTAGTGGGAATGCTTTCAGGAGATATGGAAGTGACAACAGTAACTTCAAAGCCCGGTTACTTGACAGACTGGAAATTTGATGATTTAACGACAGTCACCAGCCTAACAAAACTGGATGGTGTAAGTACTGTCACCAACCTAGCGACTGATATGACGACTAAAGGAACTGATTTTAGCTTCAACAAATCATCGGCAAGTACAAGCATAATGGGCCAATCACCTCCTAAAGCCATTCATTCCATGTCTCAAAATACTGTTGATGGTCGGTGA

Protein Analysis

1008

Amino Acids

110.1

Weight (kDa)

5.52

Isoelectric Point (pI)

35.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 172 - 342 1.5e-10 Leucine-rich repeat region
Malectin PF11721 389 - 574 1.2e-38 Malectin domain
Pkinase PF00069 657 - 920 1.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 660 - 922 8.5e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1161
AatII GACGTC 1 cut(s) 1516
Acc36I ACCTGC 2 cut(s) 1568, 1714
AccB1I GGYRCC 2 cut(s) 308, 941
AccB7I CCANNNNNTGG 1 cut(s) 215
AccBSI CCGCTC 1 cut(s) 1690
AccI GTMKAC 2 cut(s) 1328, 1681
AciI CCGC 3 cut(s) 92, 264, 1690
AclWI GGATC 3 cut(s) 254, 2371, 2564
AcuI CTGAAG 3 cut(s) 120, 1051, 1086
AcyI GRCGYC 1 cut(s) 1513
AdeI CACNNNGTG 1 cut(s) 2027
AfaI GTAC 9 cut(s) 896, 992, 1696, 1824, 2147, 2331, 2440, 2884, 2956
AfiI CCNNNNNNNGG 5 cut(s) 215, 1209, 1691, 2579, 2761
AflIII ACRYGT 2 cut(s) 1471, 2258
AhlI ACTAGT 2 cut(s) 1769, 2647
AjnI CCWGG 3 cut(s) 1147, 1533, 2133
AjuI GAANNNNNNNTTGG 2 cut(s) 321, 353
Alw21I GWGCWC 2 cut(s) 800, 2720
Alw26I GTCTC 4 cut(s) 198, 912, 1504, 3006
Alw44I GTGCAC 1 cut(s) 2716
AlwI GGATC 3 cut(s) 254, 2371, 2564
AlwNI CAGNNNCTG 1 cut(s) 11
Ama87I CYCGRG 1 cut(s) 950
AoxI GGCC 5 cut(s) 174, 1144, 2346, 2558, 2968
ApaLI GTGCAC 1 cut(s) 2716
ApeKI GCWGC 5 cut(s) 221, 443, 1484, 1715, 2063
ArsI GACNNNNNNTTYG 2 cut(s) 2816, 2848
AseI ATTAAT 1 cut(s) 1173
Asp700I GAANNNNTTC 3 cut(s) 13, 602, 2770
AsuC2I CCSGG 2 cut(s) 1495, 2811
AsuHPI GGTGA 6 cut(s) 388, 2594, 2721, 2845, 2881, 2967
AsuII TTCGAA 2 cut(s) 714, 2323
AvaI CYCGRG 1 cut(s) 950
AvaII GGWCC 7 cut(s) 431, 719, 1184, 1244, 1703, 1919, 2003
BaeGI GKGCMC 1 cut(s) 2720
BaeI ACNNNNGTAYC 2 cut(s) 2422, 2455
BanI GGYRCC 2 cut(s) 308, 941
BanII GRGCYC 2 cut(s) 800, 1239
BarI GAAGNNNNNNTAC 6 cut(s) 708, 740, 1023, 1055, 1319, 1351
BbsI GAAGAC 3 cut(s) 1088, 1191, 2513
Bbv12I GWGCWC 2 cut(s) 800, 2720
BbvCI CCTCAGC 1 cut(s) 848
BbvI GCAGC 5 cut(s) 208, 455, 1471, 1727, 2075
BceAI ACGGC 1 cut(s) 1632
BciT130I CCWGG 3 cut(s) 1149, 1535, 2135
BciVI GTATCC 1 cut(s) 645
BclI TGATCA 1 cut(s) 2212
BcnI CCSGG 2 cut(s) 1495, 2811
BcoDI GTCTC 4 cut(s) 198, 912, 1504, 3006
BcuI ACTAGT 2 cut(s) 1769, 2647
BfaI CTAG 8 cut(s) 593, 627, 1001, 1770, 2286, 2648, 2658, 2897
BfmI CTRYAG 3 cut(s) 441, 2011, 2061
BfuAI ACCTGC 2 cut(s) 1568, 1714
BfuI GTATCC 1 cut(s) 645
BglII AGATCT 1 cut(s) 1874
BisI GCNGC 5 cut(s) 222, 444, 1485, 1716, 2064
BlpI GCTNAGC 1 cut(s) 2406
BlsI GCNGC 5 cut(s) 223, 445, 1486, 1717, 2065
BmcAI AGTACT 2 cut(s) 1824, 2884
Bme1390I CCNGG 5 cut(s) 1149, 1495, 1535, 2135, 2811
Bme18I GGWCC 7 cut(s) 431, 719, 1184, 1244, 1703, 1919, 2003
BmeT110I CYCGRG 1 cut(s) 950
BmiI GGNNCC 3 cut(s) 310, 943, 2177
BmrFI CCNGG 5 cut(s) 1149, 1495, 1535, 2135, 2811
BmrI ACTGGG 1 cut(s) 1797
BmsI GCATC 3 cut(s) 495, 974, 2075
BmuI ACTGGG 1 cut(s) 1797
BoxI GACNNNNGTC 1 cut(s) 2513
BpiI GAAGAC 3 cut(s) 1088, 1191, 2513
BplI GAGNNNNNCTC 2 cut(s) 787, 819
BpmI CTGGAG 1 cut(s) 2216
Bpu10I CCTNAGC 2 cut(s) 848, 1686
Bpu1102I GCTNAGC 1 cut(s) 2406
Bpu14I TTCGAA 2 cut(s) 714, 2323
BpuEI CTTGAG 5 cut(s) 51, 114, 712, 1442, 1451
BpuMI CCSGG 2 cut(s) 1495, 2811
BsaHI GRCGYC 1 cut(s) 1513
BsaI GGTCTC 1 cut(s) 198
BsaJI CCNNGG 4 cut(s) 1147, 1240, 1534, 2074
BsaWI WCCGGW 3 cut(s) 200, 1732, 2473
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 5 cut(s) 215, 1209, 1691, 2579, 2761
Bse1I ACTGG 8 cut(s) 237, 466, 1270, 1792, 2086, 2349, 2831, 2874
Bse3DI GCAATG 3 cut(s) 194, 447, 1297
BseBI CCWGG 3 cut(s) 1149, 1535, 2135
BseDI CCNNGG 4 cut(s) 1147, 1240, 1534, 2074
BseGI GGATG 3 cut(s) 2066, 2744, 2878
BseLI CCNNNNNNNGG 5 cut(s) 215, 1209, 1691, 2579, 2761
BseMI GCAATG 3 cut(s) 194, 447, 1297
BseMII CTCAG 9 cut(s) 530, 579, 839, 923, 1179, 1337, 1677, 2088, 2151
BseNI ACTGG 8 cut(s) 237, 466, 1270, 1792, 2086, 2349, 2831, 2874
BseSI GKGCMC 1 cut(s) 2720
BseXI GCAGC 5 cut(s) 208, 455, 1471, 1727, 2075
BsgI GTGCAG 1 cut(s) 2140
BshFI GGCC 5 cut(s) 176, 1146, 2348, 2560, 2970
BshNI GGYRCC 2 cut(s) 308, 941
BsiHKAI GWGCWC 2 cut(s) 800, 2720
BsiHKCI CYCGRG 1 cut(s) 950
BsiSI CCGG 6 cut(s) 201, 306, 1494, 1733, 2474, 2811
BslFI GGGAC 2 cut(s) 1684, 2737
BslI CCNNNNNNNGG 5 cut(s) 215, 1209, 1691, 2579, 2761
BsmAI GTCTC 4 cut(s) 198, 912, 1504, 3006
BsmBI CGTCTC 1 cut(s) 1504
BsmFI GGGAC 2 cut(s) 1684, 2737
BsmI GAATGC 4 cut(s) 790, 1011, 1539, 2772
BsnI GGCC 5 cut(s) 176, 1146, 2348, 2560, 2970
Bso31I GGTCTC 1 cut(s) 198
BsoBI CYCGRG 1 cut(s) 950
Bsp119I TTCGAA 2 cut(s) 714, 2323
Bsp1286I GDGCHC 3 cut(s) 800, 1239, 2720
Bsp1407I TGTACA 1 cut(s) 2329
Bsp143I GATC 6 cut(s) 259, 542, 1874, 2212, 2376, 2569
Bsp1720I GCTNAGC 1 cut(s) 2406
BspACI CCGC 3 cut(s) 92, 264, 1690
BspANI GGCC 5 cut(s) 176, 1146, 2348, 2560, 2970
BspCNI CTCAG 9 cut(s) 531, 580, 840, 922, 1180, 1336, 1678, 2089, 2152
BspLI GGNNCC 3 cut(s) 310, 943, 2177
BspMAI CTGCAG 2 cut(s) 445, 2065
BspMI ACCTGC 2 cut(s) 1568, 1714
BspPI GGATC 3 cut(s) 254, 2371, 2564
BspQI GCTCTTC 2 cut(s) 805, 1890
BspT104I TTCGAA 2 cut(s) 714, 2323
BspT107I GGYRCC 2 cut(s) 308, 941
BspTNI GGTCTC 1 cut(s) 198
BsrBI CCGCTC 1 cut(s) 1690
BsrDI GCAATG 3 cut(s) 194, 447, 1297
BsrGI TGTACA 1 cut(s) 2329
BsrI ACTGG 8 cut(s) 237, 466, 1270, 1792, 2086, 2349, 2831, 2874
BssECI CCNNGG 4 cut(s) 1147, 1240, 1534, 2074
BssMI GATC 6 cut(s) 259, 542, 1874, 2212, 2376, 2569
BssNAI GTATAC 2 cut(s) 1329, 1682
BssNI GRCGYC 1 cut(s) 1513
BssT1I CCWWGG 2 cut(s) 1240, 2074
Bst1107I GTATAC 2 cut(s) 1329, 1682
Bst2UI CCWGG 3 cut(s) 1149, 1535, 2135
Bst4CI ACNGT 7 cut(s) 1450, 1750, 2207, 2797, 2851, 2887, 3013
Bst6I CTCTTC 4 cut(s) 805, 975, 1890, 2029
BstACI GRCGYC 1 cut(s) 1513
BstAPI GCANNNNNTGC 2 cut(s) 315, 449
BstAUI TGTACA 1 cut(s) 2329
BstBI TTCGAA 2 cut(s) 714, 2323
BstC8I GCNNGC 3 cut(s) 467, 1114, 1309
BstF5I GGATG 3 cut(s) 2066, 2744, 2878
BstKTI GATC 6 cut(s) 262, 545, 1877, 2215, 2379, 2572
BstMAI GTCTC 4 cut(s) 198, 912, 1504, 3006
BstMBI GATC 6 cut(s) 259, 542, 1874, 2212, 2376, 2569
BstMWI GCNNNNNNNGC 9 cut(s) 110, 315, 449, 589, 1143, 1313, 1715, 1724, 2967
BstNI CCWGG 3 cut(s) 1149, 1535, 2135
BstNSI RCATGY 1 cut(s) 1475
BstPAI GACNNNNGTC 1 cut(s) 2513
BstSCI CCNGG 5 cut(s) 1147, 1493, 1533, 2133, 2809
BstSFI CTRYAG 3 cut(s) 441, 2011, 2061
BstSLI GKGCMC 1 cut(s) 2720
BstV1I GCAGC 5 cut(s) 208, 455, 1471, 1727, 2075
BstV2I GAAGAC 3 cut(s) 1088, 1191, 2513
BstX2I RGATCY 1 cut(s) 1874
BstYI RGATCY 1 cut(s) 1874
BstZ17I GTATAC 2 cut(s) 1329, 1682
BsuI GTATCC 1 cut(s) 645
BsuRI GGCC 5 cut(s) 176, 1146, 2348, 2560, 2970
BtsCI GGATG 3 cut(s) 2066, 2744, 2878
BtsI GCAGTG 3 cut(s) 220, 1096, 1318
BtsIMutI CAGTG 8 cut(s) 117, 156, 220, 1096, 1318, 1729, 2157, 2557
BveI ACCTGC 2 cut(s) 1568, 1714
Cac8I GCNNGC 3 cut(s) 467, 1114, 1309
CaiI CAGNNNCTG 1 cut(s) 11
CsiI ACCWGGT 1 cut(s) 2133
Csp6I GTAC 9 cut(s) 895, 991, 1695, 1823, 2146, 2330, 2439, 2883, 2955
CspCI CAANNNNNGTGG 2 cut(s) 235, 270
CviAII CATG 7 cut(s) 210, 1472, 1622, 2485, 2624, 2749, 2998
CviQI GTAC 9 cut(s) 895, 991, 1695, 1823, 2146, 2330, 2439, 2883, 2955
DpnI GATC 6 cut(s) 261, 544, 1876, 2214, 2378, 2571
DpnII GATC 6 cut(s) 259, 542, 1874, 2212, 2376, 2569
DraI TTTAAA 1 cut(s) 2241
DraIII CACNNNGTG 1 cut(s) 2027
Eam1104I CTCTTC 4 cut(s) 805, 975, 1890, 2029
EarI CTCTTC 4 cut(s) 805, 975, 1890, 2029
Ecl136II GAGCTC 1 cut(s) 798
Eco130I CCWWGG 2 cut(s) 1240, 2074
Eco24I GRGCYC 2 cut(s) 800, 1239
Eco31I GGTCTC 1 cut(s) 198
Eco32I GATATC 1 cut(s) 2388
Eco47I GGWCC 7 cut(s) 431, 719, 1184, 1244, 1703, 1919, 2003
Eco53kI GAGCTC 1 cut(s) 798
Eco57I CTGAAG 3 cut(s) 120, 1051, 1086
Eco88I CYCGRG 1 cut(s) 950
EcoICRI GAGCTC 1 cut(s) 798
EcoO109I RGGNCCY 3 cut(s) 431, 719, 1184
EcoRI GAATTC 2 cut(s) 145, 2669
EcoRII CCWGG 3 cut(s) 1147, 1533, 2133
EcoRV GATATC 1 cut(s) 2388
EcoT14I CCWWGG 2 cut(s) 1240, 2074
EcoT38I GRGCYC 2 cut(s) 800, 1239
ErhI CCWWGG 2 cut(s) 1240, 2074
Esp3I CGTCTC 1 cut(s) 1504
FaeI CATG 7 cut(s) 213, 1475, 1625, 2488, 2627, 2752, 3001
FaqI GGGAC 2 cut(s) 1684, 2737
FatI CATG 7 cut(s) 209, 1471, 1621, 2484, 2623, 2748, 2997
FauI CCCGC 2 cut(s) 271, 1683
FauNDI CATATG 1 cut(s) 284
FbaI TGATCA 1 cut(s) 2212
FblI GTMKAC 2 cut(s) 1328, 1681
Fnu4HI GCNGC 5 cut(s) 222, 444, 1485, 1716, 2064
FokI GGATG 3 cut(s) 2053, 2731, 2885
FriOI GRGCYC 2 cut(s) 800, 1239
Fsp4HI GCNGC 5 cut(s) 222, 444, 1485, 1716, 2064
FspBI CTAG 8 cut(s) 593, 627, 1001, 1770, 2286, 2648, 2658, 2897
GluI GCNGC 5 cut(s) 222, 444, 1485, 1716, 2064
GsuI CTGGAG 1 cut(s) 2216
HaeIII GGCC 5 cut(s) 176, 1146, 2348, 2560, 2970
HapII CCGG 6 cut(s) 201, 306, 1494, 1733, 2474, 2811
Hin1I GRCGYC 1 cut(s) 1513
Hin1II CATG 7 cut(s) 213, 1475, 1625, 2488, 2627, 2752, 3001
HincII GTYRAC 1 cut(s) 2256
HindII GTYRAC 1 cut(s) 2256
HindIII AAGCTT 4 cut(s) 680, 1333, 1982, 2408
HinfI GANTC 7 cut(s) 230, 869, 1152, 1367, 2151, 2312, 2654
HpaII CCGG 6 cut(s) 201, 306, 1494, 1733, 2474, 2811
HphI GGTGA 6 cut(s) 388, 2594, 2721, 2845, 2881, 2967
HpyCH4III ACNGT 7 cut(s) 1450, 1750, 2207, 2797, 2851, 2887, 3013
HpyCH4IV ACGT 3 cut(s) 1196, 1513, 2260
HpyF10VI GCNNNNNNNGC 9 cut(s) 110, 315, 449, 589, 1143, 1313, 1715, 1724, 2967
HpySE526I ACGT 3 cut(s) 1196, 1513, 2260
Hsp92I GRCGYC 1 cut(s) 1513
Hsp92II CATG 7 cut(s) 213, 1475, 1625, 2488, 2627, 2752, 3001
Ksp22I TGATCA 1 cut(s) 2212
Kzo9I GATC 6 cut(s) 259, 542, 1874, 2212, 2376, 2569
LguI GCTCTTC 2 cut(s) 805, 1890
LmnI GCTCC 7 cut(s) 82, 94, 218, 795, 1008, 1595, 2181
Lsp1109I GCAGC 5 cut(s) 208, 455, 1471, 1727, 2075
LweI GCATC 3 cut(s) 495, 974, 2075
MabI ACCWGGT 1 cut(s) 2133
MaeI CTAG 8 cut(s) 593, 627, 1001, 1770, 2286, 2648, 2658, 2897
MaeII ACGT 3 cut(s) 1196, 1513, 2260
MalI GATC 6 cut(s) 261, 544, 1876, 2214, 2378, 2571
MbiI CCGCTC 1 cut(s) 1690
MboI GATC 6 cut(s) 259, 542, 1874, 2212, 2376, 2569
MfeI CAATTG 3 cut(s) 2054, 2457, 2618
MflI RGATCY 1 cut(s) 1874
MhlI GDGCHC 3 cut(s) 800, 1239, 2720
MlyI GAGTC 2 cut(s) 224, 2648
MmeI TCCRAC 3 cut(s) 1276, 1790, 1897
MroXI GAANNNNTTC 3 cut(s) 13, 602, 2770
MseI TTAA 8 cut(s) 756, 1047, 1173, 2169, 2240, 2265, 2294, 2843
MslI CAYNNNNRTG 1 cut(s) 2337
MspA1I CMGCKG 1 cut(s) 913
MspI CCGG 6 cut(s) 201, 306, 1494, 1733, 2474, 2811
MspR9I CCNGG 5 cut(s) 1149, 1495, 1535, 2135, 2811
MunI CAATTG 3 cut(s) 2054, 2457, 2618
Mva1269I GAATGC 4 cut(s) 790, 1011, 1539, 2772
MvaI CCWGG 3 cut(s) 1149, 1535, 2135
MwoI GCNNNNNNNGC 9 cut(s) 110, 315, 449, 589, 1143, 1313, 1715, 1724, 2967
NciI CCSGG 2 cut(s) 1495, 2811
NdeI CATATG 1 cut(s) 284
NdeII GATC 6 cut(s) 259, 542, 1874, 2212, 2376, 2569
NlaIII CATG 7 cut(s) 213, 1475, 1625, 2488, 2627, 2752, 3001
NlaIV GGNNCC 3 cut(s) 310, 943, 2177
NmuCI GTSAC 6 cut(s) 239, 287, 1261, 2788, 2851, 2887
NspI RCATGY 1 cut(s) 1475
NspV TTCGAA 2 cut(s) 714, 2323
PciI ACATGT 1 cut(s) 1471
PciSI GCTCTTC 2 cut(s) 805, 1890
PctI GAATGC 4 cut(s) 790, 1011, 1539, 2772
PdmI GAANNNNTTC 3 cut(s) 13, 602, 2770
PfeI GAWTC 5 cut(s) 869, 1152, 1367, 2151, 2312
PflMI CCANNNNNTGG 1 cut(s) 215
PfoI TCCNGGA 1 cut(s) 1493
PkrI GCNGC 5 cut(s) 223, 445, 1486, 1717, 2065
PleI GAGTC 2 cut(s) 224, 2648
PpsI GAGTC 2 cut(s) 224, 2648
PpuMI RGGWCCY 3 cut(s) 431, 719, 1184
PscI ACATGT 1 cut(s) 1471
PshAI GACNNNNGTC 1 cut(s) 2513
PshBI ATTAAT 1 cut(s) 1173
PsiI TTATAA 1 cut(s) 1161
Psp124BI GAGCTC 1 cut(s) 800
Psp5II RGGWCCY 3 cut(s) 431, 719, 1184
Psp6I CCWGG 3 cut(s) 1147, 1533, 2133
PspGI CCWGG 3 cut(s) 1147, 1533, 2133
PspN4I GGNNCC 3 cut(s) 310, 943, 2177
PspPPI RGGWCCY 3 cut(s) 431, 719, 1184
PsrI GAACNNNNNNTAC 2 cut(s) 1815, 1847
PstI CTGCAG 2 cut(s) 445, 2065
PstNI CAGNNNCTG 1 cut(s) 11
PsuI RGATCY 1 cut(s) 1874
PvuII CAGCTG 1 cut(s) 913
RsaI GTAC 9 cut(s) 896, 992, 1696, 1824, 2147, 2331, 2440, 2884, 2956
RsaNI GTAC 9 cut(s) 895, 991, 1695, 1823, 2146, 2330, 2439, 2883, 2955
RseI CAYNNNNRTG 1 cut(s) 2337
SacI GAGCTC 1 cut(s) 800
SapI GCTCTTC 2 cut(s) 805, 1890
SaqAI TTAA 8 cut(s) 756, 1047, 1173, 2169, 2240, 2265, 2294, 2843
SatI GCNGC 5 cut(s) 222, 444, 1485, 1716, 2064
Sau3AI GATC 6 cut(s) 259, 542, 1874, 2212, 2376, 2569
ScaI AGTACT 2 cut(s) 1824, 2884
SchI GAGTC 2 cut(s) 224, 2648
ScrFI CCNGG 5 cut(s) 1149, 1495, 1535, 2135, 2811
SduI GDGCHC 3 cut(s) 800, 1239, 2720
SexAI ACCWGGT 1 cut(s) 2133
SfaNI GCATC 3 cut(s) 495, 974, 2075
SfcI CTRYAG 3 cut(s) 441, 2011, 2061
SfuI TTCGAA 2 cut(s) 714, 2323
SinI GGWCC 7 cut(s) 431, 719, 1184, 1244, 1703, 1919, 2003
SmiMI CAYNNNNRTG 1 cut(s) 2337
SmlI CTYRAG 5 cut(s) 66, 129, 691, 1430, 1457
SmoI CTYRAG 5 cut(s) 66, 129, 691, 1430, 1457
SpeI ACTAGT 2 cut(s) 1769, 2647
SsiI CCGC 3 cut(s) 92, 264, 1690
SspI AATATT 3 cut(s) 169, 862, 2356
SspMI CTAG 8 cut(s) 593, 627, 1001, 1770, 2286, 2648, 2658, 2897
SstI GAGCTC 1 cut(s) 800
StyD4I CCNGG 5 cut(s) 1147, 1493, 1533, 2133, 2809
StyI CCWWGG 2 cut(s) 1240, 2074
TaaI ACNGT 7 cut(s) 1450, 1750, 2207, 2797, 2851, 2887, 3013
TaiI ACGT 3 cut(s) 1199, 1516, 2263
TaqI TCGA 4 cut(s) 714, 782, 2323, 2604
TatI WGTACW 4 cut(s) 1822, 2329, 2882, 2954
TfiI GAWTC 5 cut(s) 869, 1152, 1367, 2151, 2312
Tru1I TTAA 8 cut(s) 756, 1047, 1173, 2169, 2240, 2265, 2294, 2843
Tru9I TTAA 8 cut(s) 756, 1047, 1173, 2169, 2240, 2265, 2294, 2843
TscAI CASTG 8 cut(s) 124, 156, 220, 1096, 1318, 1729, 2164, 2557
TseFI GTSAC 6 cut(s) 239, 287, 1261, 2788, 2851, 2887
TseI GCWGC 5 cut(s) 221, 443, 1484, 1715, 2063
Tsp45I GTSAC 6 cut(s) 239, 287, 1261, 2788, 2851, 2887
TspGWI ACGGA 1 cut(s) 2163
TspRI CASTG 8 cut(s) 124, 156, 220, 1096, 1318, 1729, 2164, 2557
Van91I CCANNNNNTGG 1 cut(s) 215
VneI GTGCAC 1 cut(s) 2716
VpaK11BI GGWCC 7 cut(s) 431, 719, 1184, 1244, 1703, 1919, 2003
VspI ATTAAT 1 cut(s) 1173
XbaI TCTAGA 2 cut(s) 1000, 2657
XceI RCATGY 1 cut(s) 1475
XcmI CCANNNNNNNNNTGG 2 cut(s) 375, 406
XmiI GTMKAC 2 cut(s) 1328, 1681
XmnI GAANNNNTTC 3 cut(s) 13, 602, 2770
XspI CTAG 8 cut(s) 593, 627, 1001, 1770, 2286, 2648, 2658, 2897
ZraI GACGTC 1 cut(s) 1514
ZrmI AGTACT 2 cut(s) 1824, 2884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.