Rroxscaffold_2G00103580
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
26572926 .. 26573558
633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00103580.1

Sequence Viewer

Length: 570 bp
ATGGCGGCCTCGGCTTCCGGCCGCCAACCCGGAGTCGAGCTCGAATCGCTTGCTCCGGCCACCAACTCGGTCCGGACCGGCATCGTCTTCGTCCGTCTCCGAAATCAGATCGGCCTTCGTCCGTCGTCTTTTACCGCGATCGCCGAATCCCGGCAGTTCGGCGTCATCCTCCGTCGTCGTTCTTCTAGGGCGGCTTTGTTTTCGGTTCGGCGTCGATCCGATTTGCTTGGTGTTTATGTGGAGCTTGTGGACACAAGCTCAAGATTCTGCTCCTACTCTGCTCCGCAACCTCAAGCCACTAATGCCACGACCGACCCATCTCAAGCAAGAGTTTTGAATTCGGTGTTTGAGAAATGGAATATTCGGGCCAATCCGAAGCAATGGAACACAACCGGAGACCCTTGCAGTGGAGCCGCCATAGACTCCACCGACCACTCCACCAAATTTGATGATCCCGCTTACAACCCCTTCATCATGTGTGACCGCTCTTATCAATCCGGCACCATTTGCCACATTACCCAACCGAAAGTTCAGAACTTGGGAGTTGTTGGTGTAATTCCGGACGAGTAA

Protein Analysis

189

Amino Acids

20.67

Weight (kDa)

9.3

Isoelectric Point (pI)

62.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 500
AccBSI CCGCTC 1 cut(s) 486
AccII CGCG 1 cut(s) 137
AccIII TCCGGA 2 cut(s) 72, 559
AciI CCGC 8 cut(s) 5, 22, 135, 191, 284, 414, 456, 484
AclWI GGATC 2 cut(s) 210, 446
AcoI YGGCCR 2 cut(s) 19, 57
AcsI RAATTY 2 cut(s) 337, 443
AcyI GRCGYC 2 cut(s) 162, 211
AfiI CCNNNNNNNGG 2 cut(s) 150, 407
AgsI TTSAA 1 cut(s) 337
AjuI GAANNNNNNNTTGG 2 cut(s) 513, 545
AluBI AGCT 3 cut(s) 40, 244, 258
AluI AGCT 3 cut(s) 40, 244, 258
Alw21I GWGCWC 1 cut(s) 42
Alw26I GTCTC 2 cut(s) 101, 390
AlwI GGATC 2 cut(s) 210, 446
Aor13HI TCCGGA 2 cut(s) 72, 559
AoxI GGCC 5 cut(s) 6, 19, 57, 112, 366
ApoI RAATTY 2 cut(s) 337, 443
AsiSI GCGATCGC 1 cut(s) 141
AspS9I GGNCC 3 cut(s) 70, 75, 366
AsuC2I CCSGG 2 cut(s) 30, 151
AvaII GGWCC 2 cut(s) 70, 75
BanI GGYRCC 1 cut(s) 500
BanII GRGCYC 1 cut(s) 42
BbsI GAAGAC 1 cut(s) 79
Bbv12I GWGCWC 1 cut(s) 42
BccI CCATC 1 cut(s) 325
BcgI CGANNNNNNTGC 4 cut(s) 32, 66, 70, 104
BcnI CCSGG 2 cut(s) 30, 151
BcoDI GTCTC 2 cut(s) 101, 390
BfaI CTAG 1 cut(s) 186
BisI GCNGC 4 cut(s) 6, 22, 192, 414
BlsI GCNGC 4 cut(s) 7, 23, 193, 415
Bme1390I CCNGG 2 cut(s) 30, 151
Bme18I GGWCC 2 cut(s) 70, 75
BmgT120I GGNCC 3 cut(s) 70, 75, 366
BmiI GGNNCC 2 cut(s) 412, 502
BmrFI CCNGG 2 cut(s) 30, 151
BmsI GCATC 1 cut(s) 90
BpiI GAAGAC 1 cut(s) 79
BplI GAGNNNNNCTC 2 cut(s) 24, 56
BpuEI CTTGAG 3 cut(s) 244, 276, 306
BpuMI CCSGG 2 cut(s) 30, 151
BsaHI GRCGYC 2 cut(s) 162, 211
BsaI GGTCTC 1 cut(s) 390
BsaJI CCNNGG 1 cut(s) 9
BsaWI WCCGGW 3 cut(s) 72, 392, 559
Bsc4I CCNNNNNNNGG 2 cut(s) 150, 407
Bse118I RCCGGY 1 cut(s) 77
Bse3DI GCAATG 1 cut(s) 386
BseAI TCCGGA 2 cut(s) 72, 559
BseDI CCNNGG 1 cut(s) 9
BseGI GGATG 1 cut(s) 165
BseLI CCNNNNNNNGG 2 cut(s) 150, 407
BseMI GCAATG 1 cut(s) 386
BseX3I CGGCCG 1 cut(s) 19
Bsh1236I CGCG 1 cut(s) 137
Bsh1285I CGRYCG 3 cut(s) 22, 141, 312
BshFI GGCC 5 cut(s) 8, 21, 59, 114, 368
BshNI GGYRCC 1 cut(s) 500
BsiEI CGRYCG 3 cut(s) 22, 141, 312
BsiHKAI GWGCWC 1 cut(s) 42
BsiSI CCGG 9 cut(s) 18, 30, 56, 73, 78, 151, 393, 498, 560
BslI CCNNNNNNNGG 2 cut(s) 150, 407
BsmAI GTCTC 2 cut(s) 101, 390
BsmBI CGTCTC 1 cut(s) 101
BsnI GGCC 5 cut(s) 8, 21, 59, 114, 368
Bso31I GGTCTC 1 cut(s) 390
Bsp1286I GDGCHC 1 cut(s) 42
Bsp13I TCCGGA 2 cut(s) 72, 559
Bsp143I GATC 4 cut(s) 108, 138, 215, 451
BspACI CCGC 8 cut(s) 5, 22, 135, 191, 284, 414, 456, 484
BspANI GGCC 5 cut(s) 8, 21, 59, 114, 368
BspEI TCCGGA 2 cut(s) 72, 559
BspFNI CGCG 1 cut(s) 137
BspLI GGNNCC 2 cut(s) 412, 502
BspPI GGATC 2 cut(s) 210, 446
BspT107I GGYRCC 1 cut(s) 500
BspTNI GGTCTC 1 cut(s) 390
BsrBI CCGCTC 1 cut(s) 486
BsrDI GCAATG 1 cut(s) 386
BsrFI RCCGGY 1 cut(s) 77
BssAI RCCGGY 1 cut(s) 77
BssECI CCNNGG 1 cut(s) 9
BssMI GATC 4 cut(s) 108, 138, 215, 451
BssNI GRCGYC 2 cut(s) 162, 211
BstACI GRCGYC 2 cut(s) 162, 211
BstAPI GCANNNNNTGC 1 cut(s) 507
BstC8I GCNNGC 1 cut(s) 51
BstF5I GGATG 1 cut(s) 165
BstFNI CGCG 1 cut(s) 137
BstKTI GATC 4 cut(s) 111, 141, 218, 454
BstMAI GTCTC 2 cut(s) 101, 390
BstMBI GATC 4 cut(s) 108, 138, 215, 451
BstMCI CGRYCG 3 cut(s) 22, 141, 312
BstMWI GCNNNNNNNGC 4 cut(s) 11, 46, 302, 507
BstSCI CCNGG 2 cut(s) 28, 149
BstUI CGCG 1 cut(s) 137
BstV2I GAAGAC 1 cut(s) 79
BstZI CGGCCG 1 cut(s) 19
BsuRI GGCC 5 cut(s) 8, 21, 59, 114, 368
BtsCI GGATG 1 cut(s) 165
BtsI GCAGTG 1 cut(s) 412
BtsIMutI CAGTG 1 cut(s) 412
Cac8I GCNNGC 1 cut(s) 51
Cfr10I RCCGGY 1 cut(s) 77
Cfr13I GGNCC 3 cut(s) 70, 75, 366
CpoI CGGWCCG 2 cut(s) 70, 75
CseI GACGC 2 cut(s) 151, 200
CspCI CAANNNNNGTGG 2 cut(s) 427, 462
CspI CGGWCCG 2 cut(s) 70, 75
CviAII CATG 1 cut(s) 475
DpnI GATC 4 cut(s) 110, 140, 217, 453
DpnII GATC 4 cut(s) 108, 138, 215, 451
EaeI YGGCCR 2 cut(s) 19, 57
EagI CGGCCG 1 cut(s) 19
Ecl136II GAGCTC 1 cut(s) 40
EclXI CGGCCG 1 cut(s) 19
Eco24I GRGCYC 1 cut(s) 42
Eco31I GGTCTC 1 cut(s) 390
Eco47I GGWCC 2 cut(s) 70, 75
Eco52I CGGCCG 1 cut(s) 19
Eco53kI GAGCTC 1 cut(s) 40
EcoICRI GAGCTC 1 cut(s) 40
EcoRI GAATTC 1 cut(s) 337
EcoT38I GRGCYC 1 cut(s) 42
Esp3I CGTCTC 1 cut(s) 101
FaeI CATG 1 cut(s) 478
FaiI YATR 3 cut(s) 237, 419, 476
FatI CATG 1 cut(s) 474
FauI CCCGC 1 cut(s) 463
Fnu4HI GCNGC 4 cut(s) 6, 22, 192, 414
FokI GGATG 1 cut(s) 152
FriOI GRGCYC 1 cut(s) 42
Fsp4HI GCNGC 4 cut(s) 6, 22, 192, 414
FspBI CTAG 1 cut(s) 186
GluI GCNGC 4 cut(s) 6, 22, 192, 414
HaeIII GGCC 5 cut(s) 8, 21, 59, 114, 368
HapII CCGG 9 cut(s) 18, 30, 56, 73, 78, 151, 393, 498, 560
HgaI GACGC 2 cut(s) 151, 200
Hin1I GRCGYC 2 cut(s) 162, 211
Hin1II CATG 1 cut(s) 478
HinfI GANTC 5 cut(s) 33, 44, 146, 264, 422
HpaII CCGG 9 cut(s) 18, 30, 56, 73, 78, 151, 393, 498, 560
Hpy166II GTNNAC 1 cut(s) 250
Hpy188I TCNGA 5 cut(s) 101, 108, 220, 375, 534
Hpy188III TCNNGA 3 cut(s) 73, 261, 560
Hpy8I GTNNAC 1 cut(s) 250
Hpy99I CGWCG 4 cut(s) 127, 177, 180, 216
HpyAV CCTTC 2 cut(s) 125, 478
HpyCH4V TGCA 1 cut(s) 405
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 46, 302, 507
Hsp92I GRCGYC 2 cut(s) 162, 211
Hsp92II CATG 1 cut(s) 478
Kpn2I TCCGGA 2 cut(s) 72, 559
Kzo9I GATC 4 cut(s) 108, 138, 215, 451
LmnI GCTCC 5 cut(s) 58, 241, 275, 286, 410
LpnPI CCDG 8 cut(s) 31, 43, 69, 86, 91, 164, 406, 511
LweI GCATC 1 cut(s) 90
MaeI CTAG 1 cut(s) 186
MaeIII GTNAC 1 cut(s) 479
MalI GATC 4 cut(s) 110, 140, 217, 453
MbiI CCGCTC 1 cut(s) 486
MboI GATC 4 cut(s) 108, 138, 215, 451
MboII GAAGA 2 cut(s) 79, 174
MhlI GDGCHC 1 cut(s) 42
MluCI AATT 3 cut(s) 337, 443, 555
MlyI GAGTC 2 cut(s) 42, 416
MnlI CCTC 3 cut(s) 19, 179, 300
MroI TCCGGA 2 cut(s) 72, 559
MspI CCGG 9 cut(s) 18, 30, 56, 73, 78, 151, 393, 498, 560
MspR9I CCNGG 2 cut(s) 30, 151
MvnI CGCG 1 cut(s) 137
MwoI GCNNNNNNNGC 4 cut(s) 11, 46, 302, 507
NciI CCSGG 2 cut(s) 30, 151
NdeII GATC 4 cut(s) 108, 138, 215, 451
NlaIII CATG 1 cut(s) 478
NlaIV GGNNCC 2 cut(s) 412, 502
NmuCI GTSAC 1 cut(s) 479
PfeI GAWTC 3 cut(s) 44, 146, 264
PkrI GCNGC 4 cut(s) 7, 23, 193, 415
Ple19I CGATCG 1 cut(s) 141
PleI GAGTC 2 cut(s) 41, 416
PpsI GAGTC 2 cut(s) 41, 416
Psp124BI GAGCTC 1 cut(s) 42
PspN4I GGNNCC 2 cut(s) 412, 502
PspPI GGNCC 3 cut(s) 70, 75, 366
PvuI CGATCG 1 cut(s) 141
RgaI GCGATCGC 1 cut(s) 141
Rsr2I CGGWCCG 2 cut(s) 70, 75
RsrII CGGWCCG 2 cut(s) 70, 75
SacI GAGCTC 1 cut(s) 42
SatI GCNGC 4 cut(s) 6, 22, 192, 414
Sau3AI GATC 4 cut(s) 108, 138, 215, 451
Sau96I GGNCC 3 cut(s) 70, 75, 366
SchI GAGTC 2 cut(s) 42, 416
ScrFI CCNGG 2 cut(s) 30, 151
SduI GDGCHC 1 cut(s) 42
SetI ASST 4 cut(s) 42, 246, 260, 292
SfaAI GCGATCGC 1 cut(s) 141
SfaNI GCATC 1 cut(s) 90
SgfI GCGATCGC 1 cut(s) 141
SinI GGWCC 2 cut(s) 70, 75
SmlI CTYRAG 3 cut(s) 259, 291, 321
SmoI CTYRAG 3 cut(s) 259, 291, 321
Sse9I AATT 3 cut(s) 337, 443, 555
SsiI CCGC 8 cut(s) 5, 22, 135, 191, 284, 414, 456, 484
SspI AATATT 1 cut(s) 361
SspMI CTAG 1 cut(s) 186
SstI GAGCTC 1 cut(s) 42
StyD4I CCNGG 2 cut(s) 28, 149
TaqI TCGA 3 cut(s) 36, 42, 214
TaqII GACCGA 2 cut(s) 58, 326
TasI AATT 3 cut(s) 337, 443, 555
TauI GCSGC 4 cut(s) 8, 24, 194, 416
TfiI GAWTC 3 cut(s) 44, 146, 264
TscAI CASTG 1 cut(s) 412
TseFI GTSAC 1 cut(s) 479
Tsp45I GTSAC 1 cut(s) 479
TspDTI ATGAA 1 cut(s) 460
TspGWI ACGGA 3 cut(s) 83, 111, 161
TspRI CASTG 1 cut(s) 412
VpaK11BI GGWCC 2 cut(s) 70, 75
XapI RAATTY 2 cut(s) 337, 443
XspI CTAG 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.