RchiOBHm_Chr5g0018881

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000088
Physical Location & Seq
Forward (+)
13363090 .. 13367603
4514 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29904

Sequence Viewer

Length: 2157 bp
ATGAAGGTAAGACGCCGCACAACGTTGTATACTCGAAACCCTAACCATAGCAGAGCAGAGAGAGAGGAGAGTAAAAGTCGCGGTATTATGTGTGCACTAAAAAATGAGAATCTTCCTGGGCTGAATTGCCTTCAGAGAAATTTTCCATGCAATAGAATTGCCCCACGATATGCAAATTTTTCAATCAAGTGTGGTGGACAAGAACTTAGAGGAAGTGATGGTATATTGTATGAGGCAGAAAACTCAACTCTTGGCCCAGCTACATTTAATGTAACCAGTACAGAGAAATGGGCGGTAAGCAATGCGGGTATGTTTGCTGACAGAAATATTACAGACTATGTGGTGAATACAGATGTGACCCCAGAGCTTTTCCAGACCTCAAGATTGTCTCCCGGATCGTTGAGGTACTTCGGCTTGGGTCTGGAGAATGGGCCTTATACTGTAACATTGCAATTTGCAGAAACGGTTTTTTTAGATCGTGCCTTGCAAACATGGGGAAGTCTTGGAAGGCGCCTATTTGATATCTATATTCAGGGTGATCTAAAATGGAAGGACTTCGACATCTCGAAGGAAGCAGGTGGAGTTTTCAGAGCTGTTGCTAGAAACTTCAATGTTAATGTGTCAGAAAATTATCTTGACATTCATCTGTTCTGGGCTGGTAAGGGGACCTGCTGCATACCCGAACAAGGTCATTACGGTCCTCTAATATCAGCGGTTAAACTTGTTCCAGAATTTACTCCAACTGTTTCTGGGATTCCACCAACTACTCCAGGAAAGAAGAGCAAGACAGGACTGATAGTTGGTATTGCAGTCTCTCTTGGAGTTGTGGGCTTGCTGTTAATATTTTCAGTTCTATATTTGAGGAGGAAAAAAGCAGAGAAATATGACGATGAAGGTCGTTTCTGTTGTTTGAGAAACATGGGACCTTGTTATGTAGTGCAGAGAAAATACTTATTATGTGTTGTGACACTAGCAGTCTTTTGCAATAGCATCTATATATCGTTTCTAAATTATTGTTCTCTCTTATTAGAATATGCAGACCTTCTAGCACTAGAGAACAGACCAAATACTTTCAGTTATTCCCAGTTGAAAGAAGCAACCGAAGATTTTAATCCTTCAAATAAGCTAGGAGAGGGAGGATATGGCCCTGTTTACAAGGGTACACTTTCCGATGGGAGGGCAGTGGCTGTGAAGCAACTTTCAGTAGCATCTCACCAAGGGAAGAGTCAATTTGCTGCGGAAATTGCTACCATATCTGCAGTGCAACATCGAAATCTAGTGAAACTGTATGGATGCTGTATCGAAGGAAGCCAGCGAATTTTGGTTTATGAATATCTTGAAAACAAGAGCCTTGATCAAGCACTTTTTGGAACAAATGACTTGCACCTTGACTGGCTTACCCGCTTCAATATATTGTTGGGAACAGCAAGAGGACTTGCTTATCTTCATGAGGAGTCAAGCCCAAGGGTTGTGCATAGAGATGTCAAAGCCAGTAATATTTTGCTCGATGCAGAACTCTCCCCAAAAATATCTGATTTTGGATTAGCAAAGCTCTATCATGATGACAAAACCCATATAAGTACCCGAGTTGCAGGGACAATAGGCTATTTGGCACCAGAGTATGCAATGCGTGGACATCTGACTGAAAAGGCTGATGTTTTCGGTTTTGGAGTTGTTCTTTTGGAGATTCTCAGTGGAAGACCAAATGCTGACAATGATTTGGATGCCGGAAAGACTTATCTCCTTGAATGGGCATGGACTCTACATGAAAATAACAGGACTCTGGAGTTGGTGGATCCAAGATTGACAGAGTTTGATGAAGAAGAAGCCATTAGGTTCATAAGAGTAGCTTTCCAATGCACACAGGGACCGCCAATGACGCGGCCATCTATGTCACGCGTGGTTGGCATGCTTTCTGGAGATATTGAAATAGGCAGCACTATCATGTCAAAGCCAAGTTATTTGACAGATTGGGACTATAAAGATGTAACAACAAGTAGCTTTTTGATTGATCGCGATACACCATCAACTGATGATAGGAGTGAGCTCCTTCAGCCCGACAGCACAACTGGTGCTAGCACCGATATTGACCTTGCGCCATCTCCTGTGGAGGTTAATCGATCAATGGTCACTGACATTATAAGAGAAGGAAGGTAA

Protein Analysis

718

Amino Acids

80.0

Weight (kDa)

6.13

Isoelectric Point (pI)

34.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 60 - 239 9.2e-38 Malectin domain
Pkinase PF00069 372 - 634 9.9e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 373 - 635 4.5e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2141
AarI CACCTGC 1 cut(s) 566
Acc36I ACCTGC 2 cut(s) 566, 677
AccB1I GGYRCC 2 cut(s) 510, 1612
AccI GTMKAC 1 cut(s) 29
AccII CGCG 4 cut(s) 81, 1882, 1899, 2016
AciI CCGC 9 cut(s) 16, 81, 293, 305, 713, 1238, 1402, 1871, 1882
AclI AACGTT 1 cut(s) 23
AclWI GGATC 3 cut(s) 403, 1790, 1803
AcoI YGGCCR 1 cut(s) 1883
AcsI RAATTY 4 cut(s) 139, 175, 731, 1317
AcuI CTGAAG 2 cut(s) 116, 2036
AcyI GRCGYC 2 cut(s) 13, 511
AfaI GTAC 4 cut(s) 280, 407, 1162, 1582
AfiI CCNNNNNNNGG 3 cut(s) 686, 1176, 1750
AflIII ACRYGT 1 cut(s) 1897
AgsI TTSAA 8 cut(s) 183, 610, 1090, 1119, 1340, 1408, 1748, 1928
AjnI CCWGG 2 cut(s) 115, 769
AluBI AGCT 8 cut(s) 260, 367, 593, 1126, 1552, 1850, 2001, 2047
AluI AGCT 8 cut(s) 260, 367, 593, 1126, 1552, 1850, 2001, 2047
Alw21I GWGCWC 2 cut(s) 97, 2049
Alw26I GTCTC 2 cut(s) 393, 817
Alw44I GTGCAC 1 cut(s) 93
AlwI GGATC 3 cut(s) 403, 1790, 1803
AlwNI CAGNNNCTG 1 cut(s) 1187
Ama87I CYCGRG 1 cut(s) 1584
AoxI GGCC 4 cut(s) 253, 431, 1144, 1883
ApaLI GTGCAC 1 cut(s) 93
ApeKI GCWGC 3 cut(s) 672, 1235, 1935
ApoI RAATTY 4 cut(s) 139, 175, 731, 1317
Asp700I GAANNNNTTC 1 cut(s) 554
AspLEI GCGC 2 cut(s) 513, 2098
AspS9I GGNCC 7 cut(s) 254, 431, 666, 698, 923, 1145, 1868
AsuC2I CCSGG 1 cut(s) 393
AsuHPI GGTGA 3 cut(s) 355, 548, 1205
AsuNHI GCTAGC 1 cut(s) 2075
AvaI CYCGRG 1 cut(s) 1584
AvaII GGWCC 4 cut(s) 666, 698, 923, 1868
BaeGI GKGCMC 1 cut(s) 97
BamHI GGATCC 1 cut(s) 1795
BanI GGYRCC 2 cut(s) 510, 1612
BanII GRGCYC 1 cut(s) 2049
BbsI GAAGAC 1 cut(s) 1705
Bbv12I GWGCWC 2 cut(s) 97, 2049
BbvI GCAGC 3 cut(s) 659, 1222, 1947
BccI CCATC 5 cut(s) 212, 1166, 1894, 2032, 2107
BciT130I CCWGG 2 cut(s) 117, 771
BclI TGATCA 1 cut(s) 1354
BcnI CCSGG 1 cut(s) 393
BcoDI GTCTC 2 cut(s) 393, 817
BfaI CTAG 7 cut(s) 600, 971, 1046, 1052, 1127, 1277, 2076
BfmI CTRYAG 1 cut(s) 1257
BfoI RGCGCY 1 cut(s) 514
BfuAI ACCTGC 2 cut(s) 566, 677
BisI GCNGC 5 cut(s) 16, 673, 1236, 1883, 1936
BlsI GCNGC 5 cut(s) 17, 674, 1237, 1884, 1937
Bme1390I CCNGG 3 cut(s) 117, 393, 771
Bme18I GGWCC 4 cut(s) 666, 698, 923, 1868
BmeT110I CYCGRG 1 cut(s) 1584
BmgT120I GGNCC 7 cut(s) 254, 431, 666, 698, 923, 1145, 1868
BmiI GGNNCC 6 cut(s) 512, 667, 924, 1614, 1797, 1869
BmrFI CCNGG 3 cut(s) 117, 393, 771
BmrI ACTGGG 1 cut(s) 1078
BmsI GCATC 5 cut(s) 999, 1217, 1283, 1498, 1714
BmtI GCTAGC 1 cut(s) 2079
BmuI ACTGGG 1 cut(s) 1078
BpiI GAAGAC 1 cut(s) 1705
BpmI CTGGAG 4 cut(s) 443, 753, 1805, 1938
BpuEI CTTGAG 1 cut(s) 364
BpuMI CCSGG 1 cut(s) 393
Bsa29I ATCGAT 1 cut(s) 2119
BsaBI GATNNNNATC 1 cut(s) 1110
BsaHI GRCGYC 2 cut(s) 13, 511
BsaJI CCNNGG 3 cut(s) 116, 1216, 1463
Bsc4I CCNNNNNNNGG 3 cut(s) 686, 1176, 1750
Bse1I ACTGG 5 cut(s) 276, 1084, 1397, 1491, 2074
Bse3DI GCAATG 3 cut(s) 307, 446, 1632
Bse8I GATNNNNATC 1 cut(s) 1110
BseBI CCWGG 2 cut(s) 117, 771
BseCI ATCGAT 1 cut(s) 2119
BseDI CCNNGG 3 cut(s) 116, 1216, 1463
BseGI GGATG 2 cut(s) 1298, 1729
BseJI GATNNNNATC 1 cut(s) 1110
BseLI CCNNNNNNNGG 3 cut(s) 686, 1176, 1750
BseMI GCAATG 3 cut(s) 307, 446, 1632
BseMII CTCAG 1 cut(s) 1705
BseNI ACTGG 5 cut(s) 276, 1084, 1397, 1491, 2074
BseRI GAGGAG 3 cut(s) 80, 877, 1466
BseSI GKGCMC 1 cut(s) 97
BseXI GCAGC 3 cut(s) 659, 1222, 1947
BseYI CCCAGC 1 cut(s) 256
BsgI GTGCAG 1 cut(s) 959
Bsh1236I CGCG 4 cut(s) 81, 1882, 1899, 2016
BshFI GGCC 4 cut(s) 255, 433, 1146, 1885
BshNI GGYRCC 2 cut(s) 510, 1612
BshVI ATCGAT 1 cut(s) 2119
BsiHKAI GWGCWC 2 cut(s) 97, 2049
BsiHKCI CYCGRG 1 cut(s) 1584
BsiSI CCGG 2 cut(s) 393, 1728
BslFI GGGAC 5 cut(s) 679, 936, 1609, 1881, 1988
BslI CCNNNNNNNGG 3 cut(s) 686, 1176, 1750
BsmAI GTCTC 2 cut(s) 393, 817
BsmFI GGGAC 5 cut(s) 679, 936, 1609, 1881, 1988
BsnI GGCC 4 cut(s) 255, 433, 1146, 1885
BsoBI CYCGRG 1 cut(s) 1584
Bsp1286I GDGCHC 2 cut(s) 97, 2049
Bsp143I GATC 7 cut(s) 395, 475, 538, 1354, 1795, 2011, 2120
Bsp68I TCGCGA 1 cut(s) 2016
BspACI CCGC 9 cut(s) 16, 81, 293, 305, 713, 1238, 1402, 1871, 1882
BspANI GGCC 4 cut(s) 255, 433, 1146, 1885
BspCNI CTCAG 1 cut(s) 1704
BspDI ATCGAT 1 cut(s) 2119
BspFNI CGCG 4 cut(s) 81, 1882, 1899, 2016
BspHI TCATGA 2 cut(s) 1447, 1558
BspLI GGNNCC 6 cut(s) 512, 667, 924, 1614, 1797, 1869
BspMAI CTGCAG 1 cut(s) 1261
BspMI ACCTGC 2 cut(s) 566, 677
BspOI GCTAGC 1 cut(s) 2079
BspPI GGATC 3 cut(s) 403, 1790, 1803
BspQI GCTCTTC 1 cut(s) 773
BspT107I GGYRCC 2 cut(s) 510, 1612
BsrDI GCAATG 3 cut(s) 307, 446, 1632
BsrI ACTGG 5 cut(s) 276, 1084, 1397, 1491, 2074
BssECI CCNNGG 3 cut(s) 116, 1216, 1463
BssMI GATC 7 cut(s) 395, 475, 538, 1354, 1795, 2011, 2120
BssNAI GTATAC 1 cut(s) 30
BssNI GRCGYC 2 cut(s) 13, 511
BssT1I CCWWGG 2 cut(s) 1216, 1463
Bst1107I GTATAC 1 cut(s) 30
Bst2UI CCWGG 2 cut(s) 117, 771
Bst4CI ACNGT 5 cut(s) 442, 466, 698, 745, 1287
Bst6I CTCTTC 2 cut(s) 773, 1217
BstACI GRCGYC 2 cut(s) 13, 511
BstC8I GCNNGC 4 cut(s) 833, 1313, 1910, 2077
BstDEI CTNAG 2 cut(s) 206, 1691
BstF5I GGATG 2 cut(s) 1298, 1729
BstFNI CGCG 4 cut(s) 81, 1882, 1899, 2016
BstH2I RGCGCY 1 cut(s) 514
BstHHI GCGC 2 cut(s) 513, 2098
BstKTI GATC 7 cut(s) 398, 478, 541, 1357, 1798, 2014, 2123
BstMAI GTCTC 2 cut(s) 393, 817
BstMBI GATC 7 cut(s) 395, 475, 538, 1354, 1795, 2011, 2120
BstMWI GCNNNNNNNGC 4 cut(s) 1244, 1879, 1905, 2053
BstNI CCWGG 2 cut(s) 117, 771
BstNSI RCATGY 1 cut(s) 1912
BstSCI CCNGG 3 cut(s) 115, 391, 769
BstSFI CTRYAG 1 cut(s) 1257
BstSLI GKGCMC 1 cut(s) 97
BstUI CGCG 4 cut(s) 81, 1882, 1899, 2016
BstV1I GCAGC 3 cut(s) 659, 1222, 1947
BstV2I GAAGAC 1 cut(s) 1705
BstX2I RGATCY 1 cut(s) 1795
BstYI RGATCY 1 cut(s) 1795
BstZ17I GTATAC 1 cut(s) 30
Bsu15I ATCGAT 1 cut(s) 2119
BsuRI GGCC 4 cut(s) 255, 433, 1146, 1885
BsuTUI ATCGAT 1 cut(s) 2119
BtsCI GGATG 2 cut(s) 1298, 1729
BtsI GCAGTG 2 cut(s) 1188, 1266
BtsIMutI CAGTG 4 cut(s) 1188, 1266, 1699, 2130
BtuMI TCGCGA 1 cut(s) 2016
BveI ACCTGC 2 cut(s) 566, 677
Cac8I GCNNGC 4 cut(s) 833, 1313, 1910, 2077
CaiI CAGNNNCTG 1 cut(s) 1187
CciI TCATGA 2 cut(s) 1447, 1558
CfoI GCGC 2 cut(s) 513, 2098
Cfr13I GGNCC 7 cut(s) 254, 431, 666, 698, 923, 1145, 1868
ClaI ATCGAT 1 cut(s) 2119
CseI GACGC 2 cut(s) 21, 1888
Csp6I GTAC 4 cut(s) 279, 406, 1161, 1581
CspCI CAANNNNNGTGG 2 cut(s) 175, 210
CviAII CATG 9 cut(s) 147, 492, 919, 1448, 1559, 1755, 1766, 1909, 1945
CviQI GTAC 4 cut(s) 279, 406, 1161, 1581
DdeI CTNAG 2 cut(s) 206, 1691
DinI GGCGCC 1 cut(s) 512
DpnI GATC 7 cut(s) 397, 477, 540, 1356, 1797, 2013, 2122
DpnII GATC 7 cut(s) 395, 475, 538, 1354, 1795, 2011, 2120
EaeI YGGCCR 1 cut(s) 1883
Eam1104I CTCTTC 2 cut(s) 773, 1217
EarI CTCTTC 2 cut(s) 773, 1217
Ecl136II GAGCTC 1 cut(s) 2047
Eco130I CCWWGG 2 cut(s) 1216, 1463
Eco24I GRGCYC 1 cut(s) 2049
Eco32I GATATC 1 cut(s) 523
Eco47I GGWCC 4 cut(s) 666, 698, 923, 1868
Eco53kI GAGCTC 1 cut(s) 2047
Eco57I CTGAAG 2 cut(s) 116, 2036
Eco88I CYCGRG 1 cut(s) 1584
EcoICRI GAGCTC 1 cut(s) 2047
EcoO109I RGGNCCY 2 cut(s) 666, 923
EcoRII CCWGG 2 cut(s) 115, 769
EcoRV GATATC 1 cut(s) 523
EcoT14I CCWWGG 2 cut(s) 1216, 1463
EcoT38I GRGCYC 1 cut(s) 2049
EgeI GGCGCC 1 cut(s) 512
EheI GGCGCC 1 cut(s) 512
ErhI CCWWGG 2 cut(s) 1216, 1463
FaeI CATG 9 cut(s) 150, 495, 922, 1451, 1562, 1758, 1769, 1912, 1948
FalI AAGNNNNNCTT 2 cut(s) 1834, 1866
FaqI GGGAC 5 cut(s) 679, 936, 1609, 1881, 1988
FatI CATG 9 cut(s) 146, 491, 918, 1447, 1558, 1754, 1765, 1908, 1944
FauI CCCGC 2 cut(s) 298, 1409
FbaI TGATCA 1 cut(s) 1354
FblI GTMKAC 1 cut(s) 29
Fnu4HI GCNGC 5 cut(s) 16, 673, 1236, 1883, 1936
FokI GGATG 2 cut(s) 1305, 1736
FriOI GRGCYC 1 cut(s) 2049
Fsp4HI GCNGC 5 cut(s) 16, 673, 1236, 1883, 1936
FspBI CTAG 7 cut(s) 600, 971, 1046, 1052, 1127, 1277, 2076
GlaI GCGC 2 cut(s) 512, 2097
GluI GCNGC 5 cut(s) 16, 673, 1236, 1883, 1936
GsaI CCCAGC 1 cut(s) 260
GsuI CTGGAG 4 cut(s) 443, 753, 1805, 1938
HaeII RGCGCY 1 cut(s) 514
HaeIII GGCC 4 cut(s) 255, 433, 1146, 1885
HapII CCGG 2 cut(s) 393, 1728
HgaI GACGC 2 cut(s) 21, 1888
HhaI GCGC 2 cut(s) 513, 2098
Hin1I GRCGYC 2 cut(s) 13, 511
Hin1II CATG 9 cut(s) 150, 495, 922, 1451, 1562, 1758, 1769, 1912, 1948
Hin6I GCGC 2 cut(s) 511, 2096
HinP1I GCGC 2 cut(s) 511, 2096
HinfI GANTC 7 cut(s) 109, 754, 1225, 1454, 1687, 1759, 1780
HpaII CCGG 2 cut(s) 393, 1728
HphI GGTGA 3 cut(s) 355, 548, 1205
Hpy166II GTNNAC 6 cut(s) 30, 95, 197, 1153, 1163, 1634
Hpy188I TCNGA 6 cut(s) 135, 590, 625, 1171, 1534, 1641
Hpy8I GTNNAC 6 cut(s) 30, 95, 197, 1153, 1163, 1634
HpyCH4III ACNGT 5 cut(s) 442, 466, 698, 745, 1287
HpyCH4IV ACGT 1 cut(s) 23
HpyF10VI GCNNNNNNNGC 4 cut(s) 1244, 1879, 1905, 2053
HpyF3I CTNAG 2 cut(s) 206, 1691
HpySE526I ACGT 1 cut(s) 23
Hsp92I GRCGYC 2 cut(s) 13, 511
Hsp92II CATG 9 cut(s) 150, 495, 922, 1451, 1562, 1758, 1769, 1912, 1948
HspAI GCGC 2 cut(s) 511, 2096
KasI GGCGCC 1 cut(s) 510
Ksp22I TGATCA 1 cut(s) 1354
Kzo9I GATC 7 cut(s) 395, 475, 538, 1354, 1795, 2011, 2120
LguI GCTCTTC 1 cut(s) 773
LmnI GCTCC 1 cut(s) 2052
Lsp1109I GCAGC 3 cut(s) 659, 1222, 1947
LweI GCATC 5 cut(s) 999, 1217, 1283, 1498, 1714
MaeI CTAG 7 cut(s) 600, 971, 1046, 1052, 1127, 1277, 2076
MaeII ACGT 1 cut(s) 23
MaeIII GTNAC 7 cut(s) 271, 355, 442, 964, 1893, 1987, 2128
MalI GATC 7 cut(s) 397, 477, 540, 1356, 1797, 2013, 2122
MboI GATC 7 cut(s) 395, 475, 538, 1354, 1795, 2011, 2120
MboII GAAGA 8 cut(s) 104, 790, 1115, 1234, 1436, 1710, 1832, 1835
MflI RGATCY 1 cut(s) 1795
MhlI GDGCHC 2 cut(s) 97, 2049
MluI ACGCGT 1 cut(s) 1897
Mly113I GGCGCC 1 cut(s) 511
MlyI GAGTC 4 cut(s) 1234, 1463, 1753, 1774
MmeI TCCRAC 1 cut(s) 764
MroXI GAANNNNTTC 1 cut(s) 554
MseI TTAA 6 cut(s) 267, 615, 717, 839, 1110, 2115
MslI CAYNNNNRTG 2 cut(s) 1479, 1943
MspA1I CMGCKG 1 cut(s) 713
MspI CCGG 2 cut(s) 393, 1728
MspR9I CCNGG 3 cut(s) 117, 393, 771
MvaI CCWGG 2 cut(s) 117, 771
MvnI CGCG 4 cut(s) 81, 1882, 1899, 2016
MwoI GCNNNNNNNGC 4 cut(s) 1244, 1879, 1905, 2053
NarI GGCGCC 1 cut(s) 511
NciI CCSGG 1 cut(s) 393
NdeII GATC 7 cut(s) 395, 475, 538, 1354, 1795, 2011, 2120
NheI GCTAGC 1 cut(s) 2075
NlaIII CATG 9 cut(s) 150, 495, 922, 1451, 1562, 1758, 1769, 1912, 1948
NlaIV GGNNCC 6 cut(s) 512, 667, 924, 1614, 1797, 1869
NmuCI GTSAC 4 cut(s) 355, 964, 1893, 2128
NruI TCGCGA 1 cut(s) 2016
NspI RCATGY 1 cut(s) 1912
PaeI GCATGC 1 cut(s) 1912
PagI TCATGA 2 cut(s) 1447, 1558
PaqCI CACCTGC 1 cut(s) 566
PciSI GCTCTTC 1 cut(s) 773
PdmI GAANNNNTTC 1 cut(s) 554
PfeI GAWTC 3 cut(s) 109, 754, 1687
PfoI TCCNGGA 2 cut(s) 391, 769
PkrI GCNGC 5 cut(s) 17, 674, 1237, 1884, 1937
PleI GAGTC 4 cut(s) 1233, 1462, 1753, 1774
PluTI GGCGCC 1 cut(s) 514
PpsI GAGTC 4 cut(s) 1233, 1462, 1753, 1774
PpuMI RGGWCCY 2 cut(s) 666, 923
PsiI TTATAA 1 cut(s) 2141
Psp124BI GAGCTC 1 cut(s) 2049
Psp1406I AACGTT 1 cut(s) 23
Psp5II RGGWCCY 2 cut(s) 666, 923
Psp6I CCWGG 2 cut(s) 115, 769
PspFI CCCAGC 1 cut(s) 256
PspGI CCWGG 2 cut(s) 115, 769
PspN4I GGNNCC 6 cut(s) 512, 667, 924, 1614, 1797, 1869
PspPI GGNCC 7 cut(s) 254, 431, 666, 698, 923, 1145, 1868
PspPPI RGGWCCY 2 cut(s) 666, 923
PstI CTGCAG 1 cut(s) 1261
PstNI CAGNNNCTG 1 cut(s) 1187
PsuI RGATCY 1 cut(s) 1795
RruI TCGCGA 1 cut(s) 2016
RsaI GTAC 4 cut(s) 280, 407, 1162, 1582
RsaNI GTAC 4 cut(s) 279, 406, 1161, 1581
RseI CAYNNNNRTG 2 cut(s) 1479, 1943
SacI GAGCTC 1 cut(s) 2049
SapI GCTCTTC 1 cut(s) 773
SaqAI TTAA 6 cut(s) 267, 615, 717, 839, 1110, 2115
SatI GCNGC 5 cut(s) 16, 673, 1236, 1883, 1936
Sau3AI GATC 7 cut(s) 395, 475, 538, 1354, 1795, 2011, 2120
Sau96I GGNCC 7 cut(s) 254, 431, 666, 698, 923, 1145, 1868
SchI GAGTC 4 cut(s) 1234, 1463, 1753, 1774
ScrFI CCNGG 3 cut(s) 117, 393, 771
SduI GDGCHC 2 cut(s) 97, 2049
SfaNI GCATC 5 cut(s) 999, 1217, 1283, 1498, 1714
SfcI CTRYAG 1 cut(s) 1257
SfoI GGCGCC 1 cut(s) 512
SinI GGWCC 4 cut(s) 666, 698, 923, 1868
SmiMI CAYNNNNRTG 2 cut(s) 1479, 1943
SmlI CTYRAG 1 cut(s) 379
SmoI CTYRAG 1 cut(s) 379
SphI GCATGC 1 cut(s) 1912
SsiI CCGC 9 cut(s) 16, 81, 293, 305, 713, 1238, 1402, 1871, 1882
SspDI GGCGCC 1 cut(s) 510
SspI AATATT 3 cut(s) 328, 843, 1498
SspMI CTAG 7 cut(s) 600, 971, 1046, 1052, 1127, 1277, 2076
SstI GAGCTC 1 cut(s) 2049
StyD4I CCNGG 3 cut(s) 115, 391, 769
StyI CCWWGG 2 cut(s) 1216, 1463
TaaI ACNGT 5 cut(s) 442, 466, 698, 745, 1287
TaiI ACGT 1 cut(s) 26
TaqI TCGA 7 cut(s) 34, 558, 566, 1270, 1302, 1506, 2119
TatI WGTACW 1 cut(s) 278
TauI GCSGC 2 cut(s) 18, 1885
TfiI GAWTC 3 cut(s) 109, 754, 1687
Tru1I TTAA 6 cut(s) 267, 615, 717, 839, 1110, 2115
Tru9I TTAA 6 cut(s) 267, 615, 717, 839, 1110, 2115
TscAI CASTG 4 cut(s) 1188, 1266, 1699, 2137
TseFI GTSAC 4 cut(s) 355, 964, 1893, 2128
TseI GCWGC 3 cut(s) 672, 1235, 1935
Tsp45I GTSAC 4 cut(s) 355, 964, 1893, 2128
TspDTI ATGAA 8 cut(s) 17, 632, 906, 1344, 1436, 1782, 1828, 1833
TspRI CASTG 4 cut(s) 1188, 1266, 1699, 2137
VneI GTGCAC 1 cut(s) 93
VpaK11BI GGWCC 4 cut(s) 666, 698, 923, 1868
XapI RAATTY 4 cut(s) 139, 175, 731, 1317
XceI RCATGY 1 cut(s) 1912
XmiI GTMKAC 1 cut(s) 29
XmnI GAANNNNTTC 1 cut(s) 554
XspI CTAG 7 cut(s) 600, 971, 1046, 1052, 1127, 1277, 2076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.