FvH4_3g40970
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000088
Physical Location & Seq
Forward (+)
34467019 .. 34478632
11614 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g40970.t3

Sequence Viewer

Length: 2832 bp
ATGACTTTTCTTCAATATCTGAATGTGGAAAAAAATTACTTGACAGGACCTATCTCTGCATCAATTGGAAATCTAAGCAGTGTCACATACTTGAACTTGGGACACAACGACTTATCAGGTGAAGTACCAAAGGACATTGTAAAACTCAACAATTTGACATTCTTGGCTCTTGGGACACTCAACCTTTCTGGTTCTCTGCCACCTGAGATAGGGTACATAACAACACTAATAAAGATTTTCATTGATAATTCCGGACTTAGCGGTGAGATTCCACCAACATTTGCTAATCTAACAAACTTGGAGACATTTTGGGCAACAGATACAAACCTCACTGGCAGGCTACCAGACTTCGTAGGAGATTGGACAAAGCTTACTACCTTGAGGTTTCAGGGAAACTCTTTTGAAGGTTCTATACCATCTTCACTGTCCAAATTGACTCGTTTGACAGAGCTGCGAATTACTGATTTAACGATTGACAATGACAACTCATCTCTTGGATTTATCAAGAATATGACGTCTCTAGAAGTCTTAATGCTGAGGAATAACAATATTACTGATTCAATTCCTTCCAACATTGGAGATTTCCTAAAATTGGTTCACCTGGATTTGAGCTTCAACAATTTGGTTGGACAAATACCAGCCTCACTATTTAATATGAATGTCCTCGCCATCCTGTTTCTTGGAAACAACAAGTTGAATGGTAGCCTTCCTGTGTCTAAAAGCTCAGCTCTTCTTGTTGTAGATTTATCTTACAATAATCTAGTAGGCCAGAGCTTTCCAAGTTGGGTCAGCGAACAAAACTTACAGCTTAACTTAGTGGCCAACAACTTCAGCATAGACAGTTCAGATAGCAGTGGTCTACCTTCAGGGTTGAATTGCCTTCAAAGGGGCTTTCCTTGCCACCATGATAGTCCAGTTTATTATAACTTCATGATTAATTGCGGTGGTCCGCAGACTAAGATTTCTGATGGGACTGTGTATGAGCAGGACAGTGAGCCCCTTGGTACAGCTACATATTATGTGACTGAAACAAACAGATGGGGAGTTAGCAATGTCGGTCTTAAAACACAGTTTGTAGCTGCATCATATTTGACTGGGACCAACATTCCGAAGTATACCATATCCACTTCATCTCCAATCAGAAATACTTCAGACCCTACATTATTTCAGACTGCAAGGATCTCTGCTTCATCACTCAGATACTATGGCTTGGGTCTTGAGAACGGAAACTACACCGTGAAGCTTGAATTTGCAGAACAAGCTATCCTGGATGAGTCTACAAGAAAAAGTCTTGGAAGACGTGTGTTTGATATATACATCCAGGATGTACGTGTTGCTAAAGATTTTGATATACGAAAGGAGACAAATAGGACATCTTTGGTAGCTATCGAAAGGGTATACAACGCTCAGGTGGTTTCAGAGAATTACCTTGAAATCCATTTCTTCTGGGCTGGAAAGGGGACCTGCTGCATCCCAGAGGAGGGTACTTATGGACCTCTTATTTCAGCCATCAGTGCTACACCTGAATTCAAACCTACCGTCAGCAACAAACTGCCAAGTACCAAGAAGAATAGGACTGGGATGATTGTGGGAATTGTTGTTAGTGGGGGGGTTTTAATTCTGTTGGTGCTGCTCTTCTATATTGTTCAAAGAAGAAAATGGCACAACGCCGATGATGACTATGATGAAGATCTGTTGGGGATAGATCTTGGACCTCTCACTTTCAGTTTTTCTGAACTGAAGGCAGCTACGAATGACTTTAGTCCAGATAATAAGCTTGGAGAGGGAGGATTTGGGCCCGTCTTCAAAGGTACCCTAAATGATGGAAGAGTGATTGCCGTAAAACAATTGTCTGCATCATCCCATCAAGGAAAGAACCAGTTTGTGACTGAGATTGCCACTATATCTGCTGTGCGACACAATAACCTAGTAAATCTGTTTGGATTCTGCACTGAGGGAGCTAAACGGCTCCTTGTCTATGAGTATCTGGAGAACAAGAGTCTTGATCAAGCGTTATTTGGAAAAAGAACCTTGCATCTTGATTGGCGAACACGTTTTGATATATGCTTGGGCGTTGCTAGAGGTTTAACATATCTTCATGAAGAATCAAGGCTTCGAATTGTACACAGAGATGTGAAGGCAAGTAACATTCTTCTTGACTCTAATCTCATTGCCAAAATATCAGATTTTGGTTTGGCCAAGCATTATGATGAGAAAAAGACTCACATGAGTACTCGAGTTGCGGGAACAATCGGGTATCTTGCACCGGAATATGCCATGCGTGGACACTTGACTGAGAAGACTGATGTGTTTGCCTATGGTGTTGTCATTCTAGAAATTGTCAGCGGTAGGCCAAATTCTGATCCAAGTTTGGAAGGAGATATGGTTTATCTTCTTGAACTGGCCTGGAACTTGCATGAAAACAAACGTGAAGTTGATCTTGTAGACTCTAGATTATCTGAATTCAATGAGGAAGAAGCAAGACGAATTATTAACATAGGACTTGTGTGCACTCAATCATCACCAAATCTACGACCCTCTATGTCTCGCGTGATCGGAATGCTTACAGGAGATATTGAAGTGACTCCTGCTACTTCGAAGCCTGGTTACTTGACAGACTGGAAATTCGATGATGTAACTACTATCACCAGCCAAACGAGATTCGGTGATGGAAGTACCGGCACCAGTTTAGCAACTGATAATTCAATTAGAGGAACTGACTTCAGCTTTTACAACTCATCGGCAGGTACAAGTGTGATGGGGGATTCAGGGCAATTACCTTCAAATACCACCCTTCCAATACTTAGTAGTACAAATGGTGATGGTAGGTAA

Protein Analysis

944

Amino Acids

103.78

Weight (kDa)

5.49

Isoelectric Point (pI)

37.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 19 - 154 3.4e-11 Leucine-rich repeat region
LRR_4 PF12799 172 - 213 3.5e-06 Leucine Rich repeats (2 copies)
Malectin PF11721 310 - 504 1.3e-40 Malectin domain
PK_Tyr_Ser-Thr PF07714 590 - 853 1.4e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 590 - 850 2.6e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 924
AatII GACGTC 1 cut(s) 518
Acc36I ACCTGC 2 cut(s) 1472, 2735
Acc65I GGTACC 1 cut(s) 1811
AccB1I GGYRCC 2 cut(s) 1811, 2681
AccI GTMKAC 5 cut(s) 859, 1115, 1277, 1398, 2445
AccII CGCG 1 cut(s) 2550
AccIII TCCGGA 1 cut(s) 251
AciI CCGC 5 cut(s) 261, 942, 950, 2243, 2346
AclWI GGATC 2 cut(s) 1187, 2357
AcoI YGGCCR 2 cut(s) 819, 2196
AcsI RAATTY 5 cut(s) 1247, 1526, 2356, 2462, 2624
AcuI CTGAAG 5 cut(s) 814, 849, 1134, 1760, 2707
AcyI GRCGYC 1 cut(s) 515
AfiI CCNNNNNNNGG 5 cut(s) 209, 592, 886, 1480, 1481
AflIII ACRYGT 3 cut(s) 1300, 1330, 2051
AjiI CACGTC 1 cut(s) 1301
AjnI CCWGG 5 cut(s) 600, 1266, 1320, 2405, 2602
AloI GAACNNNNNNTCC 2 cut(s) 1248, 1280
Alw21I GWGCWC 1 cut(s) 2513
Alw26I GTCTC 4 cut(s) 296, 522, 1355, 2550
Alw44I GTGCAC 1 cut(s) 2509
AlwI GGATC 2 cut(s) 1187, 2357
Ama87I CYCGRG 1 cut(s) 2235
Aor13HI TCCGGA 1 cut(s) 251
AoxI GGCC 6 cut(s) 766, 819, 1796, 2196, 2351, 2403
ApaI GGGCCC 1 cut(s) 1800
ApaLI GTGCAC 1 cut(s) 2509
ApeKI GCWGC 5 cut(s) 451, 1079, 1467, 1630, 1745
ApoI RAATTY 5 cut(s) 1247, 1526, 2356, 2462, 2624
ArsI GACNNNNNNTTYG 4 cut(s) 1524, 1556, 2609, 2641
AseI ATTAAT 1 cut(s) 936
Asp700I GAANNNNTTC 1 cut(s) 1147
Asp718I GGTACC 1 cut(s) 1811
AspS9I GGNCC 8 cut(s) 47, 947, 1098, 1461, 1493, 1712, 1796, 1797
AsuHPI GGTGA 7 cut(s) 131, 275, 590, 2514, 2638, 2678, 2831
AsuII TTCGAA 2 cut(s) 2116, 2597
AvaI CYCGRG 1 cut(s) 2235
AvaII GGWCC 6 cut(s) 47, 947, 1098, 1461, 1493, 1712
BaeGI GKGCMC 2 cut(s) 1800, 2513
BaeI ACNNNNGTAYC 2 cut(s) 2739, 2772
BalI TGGCCA 2 cut(s) 821, 2198
BanI GGYRCC 2 cut(s) 1811, 2681
BanII GRGCYC 2 cut(s) 999, 1800
BarI GAAGNNNNNNTAC 4 cut(s) 396, 428, 2591, 2623
BbsI GAAGAC 3 cut(s) 1303, 1795, 2306
Bbv12I GWGCWC 1 cut(s) 2513
BbvCI CCTCAGC 1 cut(s) 536
BbvI GCAGC 5 cut(s) 438, 1066, 1454, 1617, 1757
BceAI ACGGC 2 cut(s) 1823, 1982
BciT130I CCWGG 5 cut(s) 602, 1268, 1322, 2407, 2604
BclI TGATCA 1 cut(s) 2005
BcoDI GTCTC 4 cut(s) 296, 522, 1355, 2550
BfaI CTAG 6 cut(s) 521, 761, 1928, 2079, 2333, 2451
BfuAI ACCTGC 2 cut(s) 1472, 2735
BglII AGATCT 2 cut(s) 1690, 1705
BisI GCNGC 5 cut(s) 452, 1080, 1468, 1631, 1746
BlpI GCTNAGC 1 cut(s) 724
BlsI GCNGC 5 cut(s) 453, 1081, 1469, 1632, 1747
BmcAI AGTACT 1 cut(s) 2233
Bme1390I CCNGG 5 cut(s) 602, 1268, 1322, 2407, 2604
Bme18I GGWCC 6 cut(s) 47, 947, 1098, 1461, 1493, 1712
BmeT110I CYCGRG 1 cut(s) 2235
BmgBI CACGTC 1 cut(s) 1301
BmgT120I GGNCC 8 cut(s) 47, 947, 1098, 1461, 1493, 1712, 1796, 1797
BmiI GGNNCC 6 cut(s) 1099, 1462, 1798, 1813, 1970, 2683
BmrFI CCNGG 5 cut(s) 602, 1268, 1322, 2407, 2604
BmrI ACTGGG 2 cut(s) 1104, 1587
BmsI GCATC 5 cut(s) 68, 1091, 1479, 1865, 2044
BmuI ACTGGG 2 cut(s) 1104, 1587
BoxI GACNNNNGTC 1 cut(s) 1761
BpiI GAAGAC 3 cut(s) 1303, 1795, 2306
BpmI CTGGAG 1 cut(s) 2009
Bpu10I CCTNAGC 2 cut(s) 536, 1407
Bpu1102I GCTNAGC 1 cut(s) 724
Bpu14I TTCGAA 2 cut(s) 2116, 2597
BpuEI CTTGAG 2 cut(s) 400, 1238
BsaAI YACGTR 1 cut(s) 1331
BsaBI GATNNNNATC 1 cut(s) 1689
BsaHI GRCGYC 1 cut(s) 515
BsaJI CCNNGG 1 cut(s) 1000
BsaWI WCCGGW 2 cut(s) 251, 2266
BsaXI ACNNNNNCTCC 4 cut(s) 1117, 1147, 2370, 2400
Bsc4I CCNNNNNNNGG 5 cut(s) 209, 592, 886, 1480, 1481
Bse118I RCCGGY 1 cut(s) 2678
Bse1I ACTGG 8 cut(s) 337, 914, 1099, 1582, 1879, 2406, 2624, 2685
Bse3DI GCAATG 2 cut(s) 1057, 2169
Bse8I GATNNNNATC 1 cut(s) 1689
BseAI TCCGGA 1 cut(s) 251
BseBI CCWGG 5 cut(s) 602, 1268, 1322, 2407, 2604
BseDI CCNNGG 1 cut(s) 1000
BseGI GGATG 7 cut(s) 669, 1276, 1317, 1330, 1470, 1587, 1859
BseJI GATNNNNATC 1 cut(s) 1689
BseLI CCNNNNNNNGG 5 cut(s) 209, 592, 886, 1480, 1481
BseMI GCAATG 2 cut(s) 1057, 2169
BseMII CTCAG 8 cut(s) 195, 527, 738, 1210, 1421, 1881, 1944, 2286
BseNI ACTGG 8 cut(s) 337, 914, 1099, 1582, 1879, 2406, 2624, 2685
BseRI GAGGAG 1 cut(s) 1493
BseSI GKGCMC 2 cut(s) 1800, 2513
BseXI GCAGC 5 cut(s) 438, 1066, 1454, 1617, 1757
BsgI GTGCAG 1 cut(s) 1933
Bsh1236I CGCG 1 cut(s) 2550
BshFI GGCC 6 cut(s) 768, 821, 1798, 2198, 2353, 2405
BshNI GGYRCC 2 cut(s) 1811, 2681
BsiHKAI GWGCWC 1 cut(s) 2513
BsiHKCI CYCGRG 1 cut(s) 2235
BsiSI CCGG 3 cut(s) 252, 2267, 2679
BslFI GGGAC 5 cut(s) 114, 187, 985, 1111, 1474
BslI CCNNNNNNNGG 5 cut(s) 209, 592, 886, 1480, 1481
BsmAI GTCTC 4 cut(s) 296, 522, 1355, 2550
BsmBI CGTCTC 1 cut(s) 522
BsmFI GGGAC 5 cut(s) 114, 187, 985, 1111, 1474
BsmI GAATGC 1 cut(s) 2565
BsnI GGCC 6 cut(s) 768, 821, 1798, 2198, 2353, 2405
BsoBI CYCGRG 1 cut(s) 2235
Bsp119I TTCGAA 2 cut(s) 2116, 2597
Bsp120I GGGCCC 1 cut(s) 1796
Bsp1286I GDGCHC 3 cut(s) 999, 1800, 2513
Bsp13I TCCGGA 1 cut(s) 251
Bsp1407I TGTACA 1 cut(s) 2122
Bsp143I GATC 7 cut(s) 1179, 1690, 1705, 2005, 2362, 2437, 2553
Bsp1720I GCTNAGC 1 cut(s) 724
BspACI CCGC 5 cut(s) 261, 942, 950, 2243, 2346
BspANI GGCC 6 cut(s) 768, 821, 1798, 2198, 2353, 2405
BspCNI CTCAG 8 cut(s) 196, 528, 737, 1209, 1420, 1882, 1945, 2287
BspEI TCCGGA 1 cut(s) 251
BspFNI CGCG 1 cut(s) 2550
BspHI TCATGA 2 cut(s) 930, 2098
BspLI GGNNCC 6 cut(s) 1099, 1462, 1798, 1813, 1970, 2683
BspMI ACCTGC 2 cut(s) 1472, 2735
BspPI GGATC 2 cut(s) 1187, 2357
BspQI GCTCTTC 2 cut(s) 735, 1640
BspT104I TTCGAA 2 cut(s) 2116, 2597
BspT107I GGYRCC 2 cut(s) 1811, 2681
BsrDI GCAATG 2 cut(s) 1057, 2169
BsrFI RCCGGY 1 cut(s) 2678
BsrGI TGTACA 1 cut(s) 2122
BsrI ACTGG 8 cut(s) 337, 914, 1099, 1582, 1879, 2406, 2624, 2685
BssAI RCCGGY 1 cut(s) 2678
BssECI CCNNGG 1 cut(s) 1000
BssMI GATC 7 cut(s) 1179, 1690, 1705, 2005, 2362, 2437, 2553
BssNAI GTATAC 2 cut(s) 1116, 1399
BssNI GRCGYC 1 cut(s) 515
BssT1I CCWWGG 1 cut(s) 1000
Bst1107I GTATAC 2 cut(s) 1116, 1399
Bst2UI CCWGG 5 cut(s) 602, 1268, 1322, 2407, 2604
Bst4CI ACNGT 7 cut(s) 426, 842, 976, 992, 1071, 1237, 1540
Bst6I CTCTTC 3 cut(s) 735, 1640, 1822
BstACI GRCGYC 1 cut(s) 515
BstAUI TGTACA 1 cut(s) 2122
BstBAI YACGTR 1 cut(s) 1331
BstBI TTCGAA 2 cut(s) 2116, 2597
BstC8I GCNNGC 1 cut(s) 338
BstENI CCTNNNNNAGG 1 cut(s) 207
BstF5I GGATG 7 cut(s) 669, 1276, 1317, 1330, 1470, 1587, 1859
BstFNI CGCG 1 cut(s) 2550
BstKTI GATC 7 cut(s) 1182, 1693, 1708, 2008, 2365, 2440, 2556
BstMAI GTCTC 4 cut(s) 296, 522, 1355, 2550
BstMBI GATC 7 cut(s) 1179, 1690, 1705, 2005, 2362, 2437, 2553
BstMWI GCNNNNNNNGC 3 cut(s) 897, 1259, 1514
BstNI CCWGG 5 cut(s) 602, 1268, 1322, 2407, 2604
BstPAI GACNNNNGTC 1 cut(s) 1761
BstSCI CCNGG 5 cut(s) 600, 1266, 1320, 2405, 2602
BstSLI GKGCMC 2 cut(s) 1800, 2513
BstUI CGCG 1 cut(s) 2550
BstV1I GCAGC 5 cut(s) 438, 1066, 1454, 1617, 1757
BstV2I GAAGAC 3 cut(s) 1303, 1795, 2306
BstX2I RGATCY 3 cut(s) 1179, 1690, 1705
BstYI RGATCY 3 cut(s) 1179, 1690, 1705
BstZ17I GTATAC 2 cut(s) 1116, 1399
BsuRI GGCC 6 cut(s) 768, 821, 1798, 2198, 2353, 2405
BtrI CACGTC 1 cut(s) 1301
BtsCI GGATG 7 cut(s) 669, 1276, 1317, 1330, 1470, 1587, 1859
BtsI GCAGTG 2 cut(s) 85, 859
BtsIMutI CAGTG 7 cut(s) 85, 330, 422, 859, 997, 1519, 1950
BveI ACCTGC 2 cut(s) 1472, 2735
Cac8I GCNNGC 1 cut(s) 338
CciI TCATGA 2 cut(s) 930, 2098
Cfr10I RCCGGY 1 cut(s) 2678
Cfr13I GGNCC 8 cut(s) 47, 947, 1098, 1461, 1493, 1712, 1796, 1797
CviAII CATG 6 cut(s) 905, 931, 2099, 2227, 2278, 2417
DpnI GATC 7 cut(s) 1181, 1692, 1707, 2007, 2364, 2439, 2555
DpnII GATC 7 cut(s) 1179, 1690, 1705, 2005, 2362, 2437, 2553
EaeI YGGCCR 2 cut(s) 819, 2196
Eam1104I CTCTTC 3 cut(s) 735, 1640, 1822
EarI CTCTTC 3 cut(s) 735, 1640, 1822
Eco130I CCWWGG 1 cut(s) 1000
Eco24I GRGCYC 2 cut(s) 999, 1800
Eco47I GGWCC 6 cut(s) 47, 947, 1098, 1461, 1493, 1712
Eco57I CTGAAG 5 cut(s) 814, 849, 1134, 1760, 2707
Eco88I CYCGRG 1 cut(s) 2235
EcoNI CCTNNNNNAGG 1 cut(s) 207
EcoO109I RGGNCCY 2 cut(s) 47, 1461
EcoRI GAATTC 2 cut(s) 1526, 2462
EcoRII CCWGG 5 cut(s) 600, 1266, 1320, 2405, 2602
EcoT14I CCWWGG 1 cut(s) 1000
EcoT38I GRGCYC 2 cut(s) 999, 1800
ErhI CCWWGG 1 cut(s) 1000
Esp3I CGTCTC 1 cut(s) 522
FaeI CATG 6 cut(s) 908, 934, 2102, 2230, 2281, 2420
FalI AAGNNNNNCTT 2 cut(s) 2424, 2456
FaqI GGGAC 5 cut(s) 114, 187, 985, 1111, 1474
FatI CATG 6 cut(s) 904, 930, 2098, 2226, 2277, 2416
FauI CCCGC 1 cut(s) 2236
FbaI TGATCA 1 cut(s) 2005
FblI GTMKAC 5 cut(s) 859, 1115, 1277, 1398, 2445
Fnu4HI GCNGC 5 cut(s) 452, 1080, 1468, 1631, 1746
FokI GGATG 7 cut(s) 656, 1283, 1304, 1337, 1457, 1594, 1846
FriOI GRGCYC 2 cut(s) 999, 1800
Fsp4HI GCNGC 5 cut(s) 452, 1080, 1468, 1631, 1746
FspBI CTAG 6 cut(s) 521, 761, 1928, 2079, 2333, 2451
GluI GCNGC 5 cut(s) 452, 1080, 1468, 1631, 1746
GsuI CTGGAG 1 cut(s) 2009
HaeIII GGCC 6 cut(s) 768, 821, 1798, 2198, 2353, 2405
HapII CCGG 3 cut(s) 252, 2267, 2679
Hin1I GRCGYC 1 cut(s) 515
Hin1II CATG 6 cut(s) 908, 934, 2102, 2230, 2281, 2420
HindIII AAGCTT 3 cut(s) 368, 1241, 1775
HpaII CCGG 3 cut(s) 252, 2267, 2679
HphI GGTGA 7 cut(s) 131, 275, 590, 2514, 2638, 2678, 2831
Hpy166II GTNNAC 9 cut(s) 598, 860, 1116, 1278, 1399, 2125, 2285, 2446, 2511
Hpy8I GTNNAC 9 cut(s) 598, 860, 1116, 1278, 1399, 2125, 2285, 2446, 2511
HpyCH4III ACNGT 7 cut(s) 426, 842, 976, 992, 1071, 1237, 1540
HpyCH4IV ACGT 5 cut(s) 515, 1300, 1330, 2053, 2428
HpyF10VI GCNNNNNNNGC 3 cut(s) 897, 1259, 1514
HpySE526I ACGT 5 cut(s) 515, 1300, 1330, 2053, 2428
Hsp92I GRCGYC 1 cut(s) 515
Hsp92II CATG 6 cut(s) 908, 934, 2102, 2230, 2281, 2420
Kpn2I TCCGGA 1 cut(s) 251
KpnI GGTACC 1 cut(s) 1815
Ksp22I TGATCA 1 cut(s) 2005
Kzo9I GATC 7 cut(s) 1179, 1690, 1705, 2005, 2362, 2437, 2553
LguI GCTCTTC 2 cut(s) 735, 1640
LmnI GCTCC 2 cut(s) 1958, 1974
Lsp1109I GCAGC 5 cut(s) 438, 1066, 1454, 1617, 1757
LweI GCATC 5 cut(s) 68, 1091, 1479, 1865, 2044
MaeI CTAG 6 cut(s) 521, 761, 1928, 2079, 2333, 2451
MaeII ACGT 5 cut(s) 515, 1300, 1330, 2053, 2428
MaeIII GTNAC 7 cut(s) 82, 1021, 1885, 2144, 2581, 2606, 2635
MalI GATC 7 cut(s) 1181, 1692, 1707, 2007, 2364, 2439, 2555
MboI GATC 7 cut(s) 1179, 1690, 1705, 2005, 2362, 2437, 2553
MfeI CAATTG 2 cut(s) 63, 1847
MflI RGATCY 3 cut(s) 1179, 1690, 1705
MhlI GDGCHC 3 cut(s) 999, 1800, 2513
MlsI TGGCCA 2 cut(s) 821, 2198
MluNI TGGCCA 2 cut(s) 821, 2198
MlyI GAGTC 7 cut(s) 430, 1283, 2008, 2153, 2215, 2441, 2578
MmeI TCCRAC 2 cut(s) 594, 607
Mox20I TGGCCA 2 cut(s) 821, 2198
MroI TCCGGA 1 cut(s) 251
MroXI GAANNNNTTC 1 cut(s) 1147
MscI TGGCCA 2 cut(s) 821, 2198
MseI TTAA 9 cut(s) 467, 530, 651, 810, 936, 1062, 1616, 2087, 2493
MslI CAYNNNNRTG 2 cut(s) 2130, 2208
Msp20I TGGCCA 2 cut(s) 821, 2198
MspA1I CMGCKG 1 cut(s) 2346
MspI CCGG 3 cut(s) 252, 2267, 2679
MspR9I CCNGG 5 cut(s) 602, 1268, 1322, 2407, 2604
MunI CAATTG 2 cut(s) 63, 1847
Mva1269I GAATGC 1 cut(s) 2565
MvaI CCWGG 5 cut(s) 602, 1268, 1322, 2407, 2604
MvnI CGCG 1 cut(s) 2550
MwoI GCNNNNNNNGC 3 cut(s) 897, 1259, 1514
NdeII GATC 7 cut(s) 1179, 1690, 1705, 2005, 2362, 2437, 2553
NlaIII CATG 6 cut(s) 908, 934, 2102, 2230, 2281, 2420
NlaIV GGNNCC 6 cut(s) 1099, 1462, 1798, 1813, 1970, 2683
NmuCI GTSAC 4 cut(s) 82, 1021, 1885, 2581
NspV TTCGAA 2 cut(s) 2116, 2597
PaeR7I CTCGAG 1 cut(s) 2235
PagI TCATGA 2 cut(s) 930, 2098
PciSI GCTCTTC 2 cut(s) 735, 1640
PctI GAATGC 1 cut(s) 2565
PdmI GAANNNNTTC 1 cut(s) 1147
PfeI GAWTC 6 cut(s) 268, 557, 1944, 2105, 2661, 2765
PfoI TCCNGGA 2 cut(s) 1266, 1320
PkrI GCNGC 5 cut(s) 453, 1081, 1469, 1632, 1747
PleI GAGTC 7 cut(s) 430, 1282, 2007, 2153, 2215, 2441, 2578
PpsI GAGTC 7 cut(s) 430, 1282, 2007, 2153, 2215, 2441, 2578
Ppu21I YACGTR 1 cut(s) 1331
PpuMI RGGWCCY 2 cut(s) 47, 1461
PshAI GACNNNNGTC 1 cut(s) 1761
PshBI ATTAAT 1 cut(s) 936
PsiI TTATAA 1 cut(s) 924
Psp5II RGGWCCY 2 cut(s) 47, 1461
Psp6I CCWGG 5 cut(s) 600, 1266, 1320, 2405, 2602
PspGI CCWGG 5 cut(s) 600, 1266, 1320, 2405, 2602
PspN4I GGNNCC 6 cut(s) 1099, 1462, 1798, 1813, 1970, 2683
PspOMI GGGCCC 1 cut(s) 1796
PspPI GGNCC 8 cut(s) 47, 947, 1098, 1461, 1493, 1712, 1796, 1797
PspPPI RGGWCCY 2 cut(s) 47, 1461
PspXI VCTCGAGB 1 cut(s) 2235
PsrI GAACNNNNNNTAC 4 cut(s) 786, 818, 1214, 1246
PsuI RGATCY 3 cut(s) 1179, 1690, 1705
RseI CAYNNNNRTG 2 cut(s) 2130, 2208
SapI GCTCTTC 2 cut(s) 735, 1640
SaqAI TTAA 9 cut(s) 467, 530, 651, 810, 936, 1062, 1616, 2087, 2493
SatI GCNGC 5 cut(s) 452, 1080, 1468, 1631, 1746
Sau3AI GATC 7 cut(s) 1179, 1690, 1705, 2005, 2362, 2437, 2553
Sau96I GGNCC 8 cut(s) 47, 947, 1098, 1461, 1493, 1712, 1796, 1797
ScaI AGTACT 1 cut(s) 2233
SchI GAGTC 7 cut(s) 430, 1283, 2008, 2153, 2215, 2441, 2578
ScrFI CCNGG 5 cut(s) 602, 1268, 1322, 2407, 2604
SduI GDGCHC 3 cut(s) 999, 1800, 2513
SfaNI GCATC 5 cut(s) 68, 1091, 1479, 1865, 2044
Sfr274I CTCGAG 1 cut(s) 2235
SfuI TTCGAA 2 cut(s) 2116, 2597
SinI GGWCC 6 cut(s) 47, 947, 1098, 1461, 1493, 1712
SlaI CTCGAG 1 cut(s) 2235
SmiMI CAYNNNNRTG 2 cut(s) 2130, 2208
SmlI CTYRAG 3 cut(s) 379, 1217, 2235
SmoI CTYRAG 3 cut(s) 379, 1217, 2235
SsiI CCGC 5 cut(s) 261, 942, 950, 2243, 2346
SspI AATATT 1 cut(s) 550
SspMI CTAG 6 cut(s) 521, 761, 1928, 2079, 2333, 2451
StyD4I CCNGG 5 cut(s) 600, 1266, 1320, 2405, 2602
StyI CCWWGG 1 cut(s) 1000
TaaI ACNGT 7 cut(s) 426, 842, 976, 992, 1071, 1237, 1540
TaiI ACGT 5 cut(s) 518, 1303, 1333, 2056, 2431
TaqI TCGA 5 cut(s) 1389, 2116, 2236, 2597, 2628
TaqII GACCGA 1 cut(s) 1046
TatI WGTACW 3 cut(s) 2122, 2231, 2810
TfiI GAWTC 6 cut(s) 268, 557, 1944, 2105, 2661, 2765
Tru1I TTAA 9 cut(s) 467, 530, 651, 810, 936, 1062, 1616, 2087, 2493
Tru9I TTAA 9 cut(s) 467, 530, 651, 810, 936, 1062, 1616, 2087, 2493
TscAI CASTG 7 cut(s) 85, 337, 429, 859, 997, 1519, 1957
TseFI GTSAC 4 cut(s) 82, 1021, 1885, 2581
TseI GCWGC 5 cut(s) 451, 1079, 1467, 1630, 1745
Tsp45I GTSAC 4 cut(s) 82, 1021, 1885, 2581
TspDTI ATGAA 9 cut(s) 229, 671, 919, 1119, 1179, 1701, 2087, 2115, 2433
TspGWI ACGGA 1 cut(s) 1239
TspRI CASTG 7 cut(s) 85, 337, 429, 859, 997, 1519, 1957
VneI GTGCAC 1 cut(s) 2509
VpaK11BI GGWCC 6 cut(s) 47, 947, 1098, 1461, 1493, 1712
VspI ATTAAT 1 cut(s) 936
XagI CCTNNNNNAGG 1 cut(s) 207
XapI RAATTY 5 cut(s) 1247, 1526, 2356, 2462, 2624
XbaI TCTAGA 3 cut(s) 520, 2332, 2450
XhoI CTCGAG 1 cut(s) 2235
XmiI GTMKAC 5 cut(s) 859, 1115, 1277, 1398, 2445
XmnI GAANNNNTTC 1 cut(s) 1147
XspI CTAG 6 cut(s) 521, 761, 1928, 2079, 2333, 2451
ZraI GACGTC 1 cut(s) 516
ZrmI AGTACT 1 cut(s) 2233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.