Rmu_sc0000968.1_g000029
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000968.1
Physical Location & Seq
Forward (+)
189690 .. 193270
3581 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000968.1_g000029.1.cds

Sequence Viewer

Length: 777 bp
atgtcgggacgttcatcatcatcgtcgtctgttctggtctttttccggtgtgctgctgccatctgctgcttcatctttggccttactggtgtaacagaagctcaggctccttctcaagctccttcatctcaacctcaggccaccactgatccatctgaagtgaaagctttgaattcaatctttgcgcaatgggggattgaggccaatgtgaagcagtggaacacaactggagacccatgtagtggagctgccattgactccaccgcattcgacgatggcgattacaaccccttcatcaaatgtgactgttccgataatgtcacttgccacataacccaactgaaagtttatgccttggatgttgttggtgtacttccggatgagttatggacattgagctacctattcaatcttaatttgggtcagaattacttgacaggacctctctctgcttccattggaaatctaactagcatgcaatacttgagccttggcattaatgctttatcgggcgagctaccaaaggaactcggaaatctcactgaattgctatcatttgctattgggacaaacaacttttctggtcctctgccatctgaactaggcagtttatcaaaattacaacaactagtgctaagaaataacaacatttctgattcaattccttccaacattggagaataccaaagtttatctcagctggacttgagcttcaacaatctaactggacaaataccagactcgctgtttaacttgagttctctttccatcctgtaa

Protein Analysis

258

Amino Acids

27.48

Weight (kDa)

4.14

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 186
AccB7I CCANNNNNTGG 1 cut(s) 242
AccIII TCCGGA 1 cut(s) 376
AciI CCGC 1 cut(s) 264
AclWI GGATC 1 cut(s) 143
AcsI RAATTY 1 cut(s) 172
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 1 cut(s) 372
AfiI CCNNNNNNNGG 1 cut(s) 242
AgsI TTSAA 5 cut(s) 172, 177, 409, 660, 715
AhlI ACTAGT 1 cut(s) 628
AluBI AGCT 8 cut(s) 101, 119, 167, 248, 399, 517, 700, 711
AluI AGCT 8 cut(s) 101, 119, 167, 248, 399, 517, 700, 711
Alw26I GTCTC 1 cut(s) 225
AlwI GGATC 1 cut(s) 143
Aor13HI TCCGGA 1 cut(s) 376
AoxI GGCC 3 cut(s) 79, 138, 201
ApeKI GCWGC 4 cut(s) 53, 56, 66, 248
ApoI RAATTY 1 cut(s) 172
AseI ATTAAT 1 cut(s) 498
AspLEI GCGC 1 cut(s) 187
AspS9I GGNCC 2 cut(s) 440, 584
AvaII GGWCC 2 cut(s) 440, 584
AxyI CCTNAGG 1 cut(s) 135
BbvI GCAGC 4 cut(s) 40, 43, 53, 235
BccI CCATC 5 cut(s) 68, 160, 269, 601, 776
BcoDI GTCTC 1 cut(s) 225
BcuI ACTAGT 1 cut(s) 628
BfaI CTAG 3 cut(s) 471, 602, 629
BisI GCNGC 4 cut(s) 54, 57, 67, 249
BlsI GCNGC 4 cut(s) 55, 58, 68, 250
Bme18I GGWCC 2 cut(s) 440, 584
BmgT120I GGNCC 2 cut(s) 440, 584
BmiI GGNNCC 1 cut(s) 108
BpmI CTGGAG 1 cut(s) 249
Bpu10I CCTNAGC 1 cut(s) 102
BpuEI CTTGAG 4 cut(s) 99, 505, 727, 775
BsaI GGTCTC 1 cut(s) 225
BsaJI CCNNGG 2 cut(s) 354, 490
BsaWI WCCGGW 2 cut(s) 45, 376
Bsc4I CCNNNNNNNGG 1 cut(s) 242
Bse1I ACTGG 3 cut(s) 91, 232, 730
Bse21I CCTNAGG 1 cut(s) 135
Bse3DI GCAATG 1 cut(s) 194
BseAI TCCGGA 1 cut(s) 376
BseDI CCNNGG 2 cut(s) 354, 490
BseGI GGATG 3 cut(s) 364, 385, 768
BseLI CCNNNNNNNGG 1 cut(s) 242
BseMI GCAATG 1 cut(s) 194
BseMII CTCAG 3 cut(s) 116, 149, 710
BseNI ACTGG 3 cut(s) 91, 232, 730
BseXI GCAGC 4 cut(s) 40, 43, 53, 235
BshFI GGCC 3 cut(s) 81, 140, 203
BsiSI CCGG 2 cut(s) 46, 377
BslFI GGGAC 2 cut(s) 21, 580
BslI CCNNNNNNNGG 1 cut(s) 242
BsmAI GTCTC 1 cut(s) 225
BsmFI GGGAC 2 cut(s) 21, 580
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 3 cut(s) 81, 140, 203
Bso31I GGTCTC 1 cut(s) 225
Bsp13I TCCGGA 1 cut(s) 376
Bsp143I GATC 1 cut(s) 148
BspACI CCGC 1 cut(s) 264
BspANI GGCC 3 cut(s) 81, 140, 203
BspCNI CTCAG 3 cut(s) 115, 148, 709
BspEI TCCGGA 1 cut(s) 376
BspLI GGNNCC 1 cut(s) 108
BspPI GGATC 1 cut(s) 143
BspTNI GGTCTC 1 cut(s) 225
BsrDI GCAATG 1 cut(s) 194
BsrI ACTGG 3 cut(s) 91, 232, 730
BssECI CCNNGG 2 cut(s) 354, 490
BssMI GATC 1 cut(s) 148
BssT1I CCWWGG 2 cut(s) 354, 490
Bst4CI ACNGT 1 cut(s) 308
BstC8I GCNNGC 2 cut(s) 476, 515
BstDEI CTNAG 4 cut(s) 102, 135, 635, 696
BstF5I GGATG 3 cut(s) 364, 385, 768
BstHHI GCGC 1 cut(s) 187
BstKTI GATC 1 cut(s) 151
BstMAI GTCTC 1 cut(s) 225
BstMBI GATC 1 cut(s) 148
BstNSI RCATGY 1 cut(s) 478
BstV1I GCAGC 4 cut(s) 40, 43, 53, 235
Bsu36I CCTNAGG 1 cut(s) 135
BsuRI GGCC 3 cut(s) 81, 140, 203
BtsCI GGATG 3 cut(s) 364, 385, 768
BtsI GCAGTG 1 cut(s) 221
BtsIMutI CAGTG 3 cut(s) 144, 221, 540
Cac8I GCNNGC 2 cut(s) 476, 515
CfoI GCGC 1 cut(s) 187
Cfr13I GGNCC 2 cut(s) 440, 584
Csp6I GTAC 1 cut(s) 371
CviAII CATG 2 cut(s) 237, 475
CviQI GTAC 1 cut(s) 371
DdeI CTNAG 4 cut(s) 102, 135, 635, 696
DpnI GATC 1 cut(s) 150
DpnII GATC 1 cut(s) 148
Eco130I CCWWGG 2 cut(s) 354, 490
Eco31I GGTCTC 1 cut(s) 225
Eco47I GGWCC 2 cut(s) 440, 584
Eco57I CTGAAG 1 cut(s) 177
Eco81I CCTNAGG 1 cut(s) 135
EcoO109I RGGNCCY 1 cut(s) 440
EcoRI GAATTC 1 cut(s) 172
EcoT14I CCWWGG 2 cut(s) 354, 490
ErhI CCWWGG 2 cut(s) 354, 490
FaeI CATG 2 cut(s) 240, 478
FaiI YATR 5 cut(s) 238, 332, 351, 388, 476
FaqI GGGAC 2 cut(s) 21, 580
FatI CATG 2 cut(s) 236, 474
Fnu4HI GCNGC 4 cut(s) 54, 57, 67, 249
FokI GGATG 3 cut(s) 371, 392, 755
Fsp4HI GCNGC 4 cut(s) 54, 57, 67, 249
FspBI CTAG 3 cut(s) 471, 602, 629
FspI TGCGCA 1 cut(s) 186
GlaI GCGC 1 cut(s) 186
GluI GCNGC 4 cut(s) 54, 57, 67, 249
GsuI CTGGAG 1 cut(s) 249
HaeIII GGCC 3 cut(s) 81, 140, 203
HapII CCGG 2 cut(s) 46, 377
HhaI GCGC 1 cut(s) 187
Hin1II CATG 2 cut(s) 240, 478
Hin6I GCGC 1 cut(s) 185
HinP1I GCGC 1 cut(s) 185
HindIII AAGCTT 1 cut(s) 165
HinfI GANTC 3 cut(s) 257, 656, 740
HpaII CCGG 2 cut(s) 46, 377
Hpy166II GTNNAC 1 cut(s) 371
Hpy188I TCNGA 6 cut(s) 157, 313, 426, 533, 598, 655
Hpy188III TCNNGA 2 cut(s) 6, 377
Hpy8I GTNNAC 1 cut(s) 371
Hpy99I CGWCG 2 cut(s) 28, 275
HpyAV CCTTC 4 cut(s) 120, 132, 301, 675
HpyCH4III ACNGT 1 cut(s) 308
HpyCH4IV ACGT 1 cut(s) 10
HpyCH4V TGCA 1 cut(s) 478
HpyF3I CTNAG 4 cut(s) 102, 135, 635, 696
HpySE526I ACGT 1 cut(s) 10
Hsp92II CATG 2 cut(s) 240, 478
HspAI GCGC 1 cut(s) 185
Kpn2I TCCGGA 1 cut(s) 376
Kzo9I GATC 1 cut(s) 148
LmnI GCTCC 3 cut(s) 112, 124, 245
Lsp1109I GCAGC 4 cut(s) 40, 43, 53, 235
MaeI CTAG 3 cut(s) 471, 602, 629
MaeII ACGT 1 cut(s) 10
MaeIII GTNAC 3 cut(s) 91, 302, 319
MalI GATC 1 cut(s) 150
MboI GATC 1 cut(s) 148
MluCI AATT 6 cut(s) 172, 415, 427, 545, 617, 660
MlyI GAGTC 2 cut(s) 251, 734
MmeI TCCRAC 1 cut(s) 693
MnlI CCTC 4 cut(s) 144, 193, 453, 597
MroI TCCGGA 1 cut(s) 376
MseI TTAA 3 cut(s) 414, 498, 750
MspA1I CMGCKG 1 cut(s) 700
MspI CCGG 2 cut(s) 46, 377
Mva1269I GAATGC 1 cut(s) 266
NdeII GATC 1 cut(s) 148
NlaIII CATG 2 cut(s) 240, 478
NlaIV GGNNCC 1 cut(s) 108
NmuCI GTSAC 2 cut(s) 302, 319
NsbI TGCGCA 1 cut(s) 186
NspI RCATGY 1 cut(s) 478
PaeI GCATGC 1 cut(s) 478
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PctI GAATGC 1 cut(s) 266
PfeI GAWTC 1 cut(s) 656
PflMI CCANNNNNTGG 1 cut(s) 242
PkrI GCNGC 4 cut(s) 55, 58, 68, 250
PleI GAGTC 2 cut(s) 251, 734
PpsI GAGTC 2 cut(s) 251, 734
PpuMI RGGWCCY 1 cut(s) 440
PshBI ATTAAT 1 cut(s) 498
Psp5II RGGWCCY 1 cut(s) 440
PspN4I GGNNCC 1 cut(s) 108
PspPI GGNCC 2 cut(s) 440, 584
PspPPI RGGWCCY 1 cut(s) 440
PvuII CAGCTG 1 cut(s) 700
RsaI GTAC 1 cut(s) 372
RsaNI GTAC 1 cut(s) 371
SaqAI TTAA 3 cut(s) 414, 498, 750
SatI GCNGC 4 cut(s) 54, 57, 67, 249
Sau3AI GATC 1 cut(s) 148
Sau96I GGNCC 2 cut(s) 440, 584
SchI GAGTC 2 cut(s) 251, 734
SinI GGWCC 2 cut(s) 440, 584
SmlI CTYRAG 4 cut(s) 114, 484, 706, 754
SmoI CTYRAG 4 cut(s) 114, 484, 706, 754
SpeI ACTAGT 1 cut(s) 628
SphI GCATGC 1 cut(s) 478
Sse9I AATT 6 cut(s) 172, 415, 427, 545, 617, 660
SsiI CCGC 1 cut(s) 264
SspMI CTAG 3 cut(s) 471, 602, 629
StyI CCWWGG 2 cut(s) 354, 490
TaaI ACNGT 1 cut(s) 308
TaiI ACGT 1 cut(s) 13
TaqI TCGA 1 cut(s) 270
TasI AATT 6 cut(s) 172, 415, 427, 545, 617, 660
TatI WGTACW 1 cut(s) 370
TfiI GAWTC 1 cut(s) 656
Tru1I TTAA 3 cut(s) 414, 498, 750
Tru9I TTAA 3 cut(s) 414, 498, 750
TscAI CASTG 3 cut(s) 151, 221, 547
TseFI GTSAC 2 cut(s) 302, 319
TseI GCWGC 4 cut(s) 53, 56, 66, 248
Tsp45I GTSAC 2 cut(s) 302, 319
TspDTI ATGAA 3 cut(s) 61, 114, 283
TspRI CASTG 3 cut(s) 151, 221, 547
Van91I CCANNNNNTGG 1 cut(s) 242
VpaK11BI GGWCC 2 cut(s) 440, 584
VspI ATTAAT 1 cut(s) 498
XapI RAATTY 1 cut(s) 172
XceI RCATGY 1 cut(s) 478
XspI CTAG 3 cut(s) 471, 602, 629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.