Rmu_sc0005472.1_g000014
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005472.1
Physical Location & Seq
Forward (+)
71788 .. 84871
13084 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005472.1_g000014.1.cds

Sequence Viewer

Length: 4332 bp
atgttattcaagttggattttgtgttatgtgaattggacgatgttgtgatttggggagcagggtggctccaggagaataaggatgggtggaccccgcagggccacttccgatttcagggtgaaatccgggggcgggtcctgtcaattatggtggtttcacttggtcagatgtcggccttgatcaaacttgatctagccaacaaagcagctccaacacctacatttgagaaaatcaacaaagagccagcgaacaaggcagatacttactactatacacatggcgaagctaccaccaaggaagagaaggataagacgaagacctttgacttcgagagcaacccctctctttctcttaccggtgaccacactccaatcccagaatcctcaggagccaactgtcagtgccaccaaaccctctgtcaacgtgcttcggtcctagtctcctcgggagccgactgtagtaccgcgaccacaacggttacggaaccagccaagcaaggtgatttttgctctactcgatctacgacgttgagtatcgattgtgtgattttgaagaagcttagcaaaagtcctcaccacgaggcacaaagaatcccgcgacgaggttggtgctctcctcgtttacaatttctcgaaagaagtcaggtcaatggacacccccaacgaccgcaccagaacggtactggcatgcccgcgcagaaaagagacttgaccagctgcaacaaaactagagccaaacataatgaactcctgttctatggggtttcgtatttgggatcccagaggattaatcagaatcactacgcttatgtttatcatagctgcagcttcatcttcatctttggttttgctgacatagcagaagctcaggccaccacatatccttctgaagcgcgagctctgacttcaatcttccagcaatggcagattaaggccaaatggaacacaaccagagatccatgcagtggagaggccatagacgactccatccaaatcgacgacaaagcttacaaccctttcgccaaatgcgcctgttcaaactccacttgccacattactcaactgaaagtttctaaattggaggttgttggcgtaattccggaacagctatggactttgaagtttctcacttatctcgatttaggtaacaattacttgacaggacctctctctgcttcaattggaaatctgagcagcttgcaaggcttgagcttaggccataacatgttatcaggccagctgccaaaggaactcggaaatctctctgatttgacatacttgggtattgggactatgaacttttccggtggtctgccacatgagctagggaatttattaaatttacagcagatttacttggatagttctggagttagcggtgagattccaccaacgtttgctaatctacgaaacttgaccacatttagggtgtcagacacagaactctctggcaggatacctgacttcataggatattggtcaaagcttacttctttggtatttcgagggaactcttttgaaggtcctataccagctacactgtccaatctgacttctctgagggagctgagaattagtgatataatatctactgccagtgggaactcttctcttggatttattaaggatatgaagtcaagatctctagaagtcctagagctgcgaaataacaatatttctgattcaattccttctaatattggagagttgcaatatttgtatcacctggcttctttgcctccagggttgaaatgcctccaaaggaactttccttgcaaagttgaccctggaatccatccttacattgggattaaatgtggtggtcctcagatcccgtcttccaatgggattgtgtatgatcaggaaaatgagacccttggtccagctacatattttgtgactggcacaagcagatggggagttagcaatgttggtattaaaacagagtatgaggatcctgagttattccggactgcaaggatctctgcttcatcacttagatactatggcttggggctggagaatggtctctacacagtcaaactccagtttgcagaacaacaaatcctagatactccaacgaaaaatcttgggagacgtgtatttgatatatatatccagggaattctagtttggaaggattttgatatacgaaaggaagcaggtgggaaatctttgcaagccgttcagaaggaatataaggcccaggtttcacaaaactaccttgaaattcatctcttttgggctggaaaggggacttgctgcgtacctgattatggtacttatggacctgttatttcagccatcagtgctacacctgcagatttcccacctactatcgttccgaaccatccaactagtaagaagaataggacggggctgattgtggggattgttgttggtggtggagtacttttgattctattgttgttggttttctgtatagttcaaagaagaaaaaggaataacaccagtaaaaatgaagatctgttgggaatagatattggaccactcactttcagtttttcagagctaaagacagctacagatgactttagtccagcgaataagattggagagggaggatttggacctgtctataaaggtactcttaatgatggaagagtaattgccgtgaagcaattgtctgcagcatcccagcaaggaaaaaatgagtttgtagctgaaattgccaccatatctgccgtgcgacacaataacctagtgaatttgcagggattctgcactgagggagttaaacggctccttgtctatgagtatctggaaaacaagagtcttgatcgtgcattatttggaaaaagaagtttgaatcttgattggtcatcaagatttgatatatgcttgggggtggctaaaggtttgacttatctccatgaggaatcaagggttcggattgtacacagagatgtgaaggccagtaatattctgctcgactctaatctcatccccaaaatatcagatttcggtttggccaagctttatgatgataaaaagacccacatcagtactcgtattgcgggaacaattgggtatcttgcaccggaatatgccatgcgtggacacctgacacagaagactgatgtgtttgcctttggtgttcttgctctagaaattgtcagtggtaggccaaattctgaccggagcttggaaggcgagatgatttatcttctcgaatgggcttggcacttgcatgaaaacaaacgcgaagttgaactagtggactctaggttatcagaattcaatgaggaagaggcaagacgaataaccaagatagggcttttgtgcactcaaacatcaccaatgcaacgaccaccaatgtcgcgtgtggtaggaatgctttcaggagatattgaagtaatgacagtaacttcaaagcctggttacttgacagactgggaatttgacgatacaagtactttcaccagtctaaccactgatatgtcagcaaagggaaatgatcctagctttgacaactcaccggcgaaaaccccaaccccaggtccaaacccgacccaatcccccaccaccctcctccacctcgctttcaaccaagaccacacctgcttctctgccgccaccgactccggcttccgcgtctacacctgcgacccctccggtctacgcggcgacgttggattcgtccagatgctcttccactgccactactttgccgtcttcggcggcggacccgacccgttctgccagcccaacaaggtcatgatctacgacgattgccagtcccgctgcgtcagcgagctcttgttccggtccgaggtcaagtcggtcaggctccgccgcgatcgcatctggaaaaccctaagggactgtgttccccccgacgccaagcctctaatcgacgacttctccctcaccctcaacgtcggcgaccgatgcctcctcgttggatccaacggcgccggcaaaaccatgatcctcaggattcttggaggcaagcacatggtcgaccccagcatggtccgggttctgggtcgctcggctttccacaacaccgctctcaccggcttcggcgacctgtcgtacctaggcggagagtggcggcgtgatgtggcctttgctggtttcgacgttccgatacagatggatgtttgggctgataaattgatcaacggggtagctgggattgacccacaaaggagagctgagctgatcaaggtgttggatattgatctttcatggaggttgcatattcatctcgcgatggcggacctgctccagttcttgaggaaggaatgtgaggagcaaggtgctatgatcgtttctcaagccccaaattggagagagagagtctga

Protein Analysis

1443

Amino Acids

159.93

Weight (kDa)

7.03

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56120 AT1G56120 AT1G56120 AT1G56130 AT1G56130 AT1G56130 AT1G56140 AT1G56145 AT1G56145 AT1G56145
fragaria_vesca FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_1g21070 FvH4_3g15410 FvH4_3g15410 FvH4_3g15430 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g15440 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g40970 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030 FvH4_3g41030
malus_domestica MD00G1023600.v1.1 MD00G1024400.v1.1 MD00G1024500.v1.1 MD00G1046700.v1.1 MD00G1047400.v1.1 MD00G1183000.v1.1 MD05G1180400.v1.1 MD05G1180500.v1.1 MD05G1257000.v1.1 MD05G1257600.v1.1 MD05G1260400.v1.1 MD05G1260700.v1.1 MD05G1260900.v1.1 MD05G1261000.v1.1 MD05G1261100.v1.1 MD15G1239100.v1.1 MD15G1239200.v1.1 MD15G1239300.v1.1 MD15G1239400.v1.1 MD15G1239500.v1.1 MD15G1240200.v1.1
prunus_persica Prupe.4G104300_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104500_v2.0.a1 Prupe.4G104700_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G104900_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G105100_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.4G136900_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1 Prupe.7G040400_v2.0.a1
pyrus_communis pycom05g20610 pycom05g23640 pycom05g23650 pycom05g23660 pycom05g23700 pycom05g23820 pycom05g23830 pycom05g23840 pycom05g23850 pycom05g23960 pycom05g23970 pycom05g23980 pycom05g24080 pycom05g24100 pycom05g24110 pycom05g24180 pycom05g24190 pycom05g24230 pycom05g24240 pycom05g24420 pycom05g24440 pycom05g24450 pycom05g24460 pycom05g24480
rosa_chinensis RchiOBHm_Chr2g0114641 RchiOBHm_Chr2g0114651 RchiOBHm_Chr2g0114711 RchiOBHm_Chr2g0114821 RchiOBHm_Chr2g0114861 RchiOBHm_Chr2g0114871 RchiOBHm_Chr2g0124231 RchiOBHm_Chr2g0142621 RchiOBHm_Chr3g0487791 RchiOBHm_Chr5g0018731 RchiOBHm_Chr5g0018761 RchiOBHm_Chr5g0018861 RchiOBHm_Chr5g0018881 RchiOBHm_Chr5g0018891 RchiOBHm_Chr5g0018901 RchiOBHm_Chr5g0018911 RchiOBHm_Chr5g0025891 RchiOBHm_Chr5g0025931 RchiOBHm_Chr5g0067281 RchiOBHm_Chr5g0073701 RchiOBHm_Chr5g0073751 RchiOBHm_Chr5g0073781 RchiOBHm_Chr5g0083701 RchiOBHm_Chr5g0083711
rosa_laevigata RLG00000018119 RLG00000018124 RLG00000018129 RLG00000018789 RLG00000032392 RLG00000032393 RLG00000032396 RLG00000032397 RLG00000032404 RLG00000032405 RLG00000032407 RLG00000032408 RLG00000032409 RLG00000032881 RLG00000032882 RLG00000036415 RLG00000036417 RLG00000037039
rosa_multiflora Rmu_co7975474.1_g000001 Rmu_co7979010.1_g000001 Rmu_co8379171.1_g000001 Rmu_co8499889.1_g000001 Rmu_sc0000370.1_g000013 Rmu_sc0000370.1_g000026 Rmu_sc0000371.1_g000027 Rmu_sc0000371.1_g000040 Rmu_sc0000563.1_g000010 Rmu_sc0000563.1_g000020 Rmu_sc0000968.1_g000029 Rmu_sc0001296.1_g000001 Rmu_sc0001296.1_g000003 Rmu_sc0001296.1_g000005 Rmu_sc0002764.1_g000042 Rmu_sc0002764.1_g000056 Rmu_sc0002968.1_g000007 Rmu_sc0003020.1_g000001 Rmu_sc0003020.1_g000002 Rmu_sc0004438.1_g000005 Rmu_sc0004501.1_g000011 Rmu_sc0004990.1_g000002 Rmu_sc0004990.1_g000022 Rmu_sc0005472.1_g000014 Rmu_sc0005839.1_g000003 Rmu_sc0005839.1_g000004 Rmu_sc0009248.1_g000007 Rmu_sc0014265.1_g000001 Rmu_sc0014538.1_g000007 Rmu_sc0016536.1_g000001 Rmu_sc0024156.1_g000001 Rmu_sc0032205.1_g000001
rosa_roxburghii Rroxscaffold_1G00007560 Rroxscaffold_1G00007610 Rroxscaffold_1G00053320 Rroxscaffold_1G00058940 Rroxscaffold_1G00058950 Rroxscaffold_1G00059000 Rroxscaffold_1G00059010 Rroxscaffold_1G00059040 Rroxscaffold_1G00073840 Rroxscaffold_1G00073870 Rroxscaffold_1G00073910 Rroxscaffold_1G00073920 Rroxscaffold_2G00103580 Rroxscaffold_2G00120060 Rroxscaffold_2G00130350 Rroxscaffold_3G00218190 Rroxscaffold_3G00237270
rosa_rugosa Rorug02G0190800.1 Rorug02G0190900 Rorug02G0190900 Rorug02G0191000 Rorug02G0191100 Rorug02G0191200 Rorug02G0249700 Rorug02G0249800 Rorug02G0249900 Rorug02G0250000 Rorug05G0046300 Rorug05G0046400 Rorug05G0046500 Rorug05G0046600 Rorug05G0089500 Rorug05G0089500 Rorug05G0089600 Rorug05G0089700 Rorug05G0092000 Rorug05G0426100 Rorug05G0485000
rosa_samantha Rh2AG249300 Rh2AG249800 Rh2CG252900 Rh2CG253200 Rh2CG254000 Rh2CG254200 Rh2DG257000 Rh2DG257100 Rh2DG257600 Rh2DG258000 Rh2DG333000 Rh2DG333100 Rh3DG318500 Rh4AG222800 Rh4DG033400 Rh5AG137400 Rh5AG137600 Rh5AG137700 Rh5AG137800 Rh5AG138100 Rh5AG138200 Rh5AG138300 Rh5AG138400 Rh5AG181400 Rh5AG181500 Rh5AG181600 Rh5AG483000 Rh5AG483600 Rh5AG537500 Rh5AG538200 Rh5BG129600 Rh5BG136800 Rh5BG136900 Rh5BG137000 Rh5CG148200 Rh5CG148400 Rh5CG197700 Rh5CG527400 Rh5CG527900 Rh5DG137200 Rh5DG137400 Rh5DG137600 Rh5DG137700 Rh5DG137800 Rh5DG137900 Rh5DG138000 Rh5DG180000 Rh5DG516100 Rh5DG516600 Rh5DG571400 Rh6DG496500
rosa_wichuraiana Rw0G007630 Rw2G019360 Rw2G019370 Rw2G019380 Rw2G019400 Rw2G019440 Rw2G019460 Rw2G024860 Rw5G012180 Rw5G012230 Rw5G012240 Rw5G012260 Rw5G016460 Rw5G016510 Rw5G044870 Rw5G044900 Rw5G044930 Rw5G044970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 2153, 2326, 3590, 3632
Acc36I ACCTGC 5 cut(s) 2153, 2326, 3590, 3632, 4257
AccB1I GGYRCC 1 cut(s) 3935
AccB7I CCANNNNNTGG 1 cut(s) 965
AccBSI CCGCTC 1 cut(s) 4034
AccI GTMKAC 3 cut(s) 3618, 3640, 3984
AccIII TCCGGA 2 cut(s) 1099, 1968
AclI AACGTT 1 cut(s) 1394
AcoI YGGCCR 1 cut(s) 2991
AcsI RAATTY 8 cut(s) 1330, 1339, 2124, 2229, 2728, 3151, 3257, 3419
AcuI CTGAAG 1 cut(s) 909
AcyI GRCGYC 2 cut(s) 3861, 3936
AflIII ACRYGT 2 cut(s) 1224, 2098
AgeI ACCGGT 1 cut(s) 356
AhdI GACNNNNNGTC 1 cut(s) 1878
AhlI ACTAGT 2 cut(s) 2357, 3235
AjiI CACGTC 1 cut(s) 2099
AjnI CCWGG 8 cut(s) 69, 1725, 1741, 1786, 2118, 2205, 3397, 3517
AjuI GAANNNNNNNTTGG 4 cut(s) 1752, 1784, 2116, 2148
AloI GAACNNNNNNTCC 2 cut(s) 2049, 2081
Alw21I GWGCWC 4 cut(s) 614, 901, 3308, 3780
Alw26I GTCTC 5 cut(s) 445, 699, 1865, 2033, 2089
Alw44I GTGCAC 1 cut(s) 3304
Ama87I CYCGRG 1 cut(s) 445
Aor13HI TCCGGA 2 cut(s) 1099, 1968
ApaLI GTGCAC 1 cut(s) 3304
ApoI RAATTY 8 cut(s) 1330, 1339, 2124, 2229, 2728, 3151, 3257, 3419
ArsI GACNNNNNNTTYG 6 cut(s) 403, 435, 3404, 3436, 3641, 3673
AseI ATTAAT 1 cut(s) 789
AsiGI ACCGGT 1 cut(s) 356
AsiSI GCGATCGC 1 cut(s) 3823
Asp700I GAANNNNTTC 1 cut(s) 3358
AspA2I CCTAGG 1 cut(s) 4063
AspLEI GCGC 4 cut(s) 697, 895, 1031, 3938
AsuC2I CCSGG 2 cut(s) 128, 4001
AvaI CYCGRG 1 cut(s) 445
AvrII CCTAGG 1 cut(s) 4063
AxyI CCTNAGG 3 cut(s) 385, 3839, 3956
BaeGI GKGCMC 1 cut(s) 3308
BaeI ACNNNNGTAYC 2 cut(s) 445, 478
BalI TGGCCA 1 cut(s) 2993
BamHI GGATCC 3 cut(s) 776, 1954, 3926
BanI GGYRCC 1 cut(s) 3935
BanII GRGCYC 2 cut(s) 901, 3780
BarI GAAGNNNNNNTAC 2 cut(s) 1512, 1544
BauI CACGAG 1 cut(s) 578
BbsI GAAGAC 4 cut(s) 323, 1830, 3101, 3688
Bbv12I GWGCWC 4 cut(s) 614, 901, 3308, 3780
BccI CCATC 9 cut(s) 77, 995, 1803, 1908, 2312, 2358, 2612, 4114, 4234
BceAI ACGGC 6 cut(s) 2168, 2618, 2690, 2777, 3677, 3949
BcgI CGANNNNNNTGC 2 cut(s) 591, 625
BciT130I CCWGG 8 cut(s) 71, 1727, 1743, 1788, 2120, 2207, 3399, 3519
BciVI GTATCC 1 cut(s) 1449
BclI TGATCA 4 cut(s) 180, 1858, 4143, 4188
BcnI CCSGG 2 cut(s) 128, 4001
BcoDI GTCTC 5 cut(s) 445, 699, 1865, 2033, 2089
BcuI ACTAGT 2 cut(s) 2357, 3235
BfmI CTRYAG 5 cut(s) 457, 823, 2319, 2544, 2649
BfoI RGCGCY 1 cut(s) 3939
BfuAI ACCTGC 5 cut(s) 2153, 2326, 3590, 3632, 4257
BfuI GTATCC 1 cut(s) 1449
BglII AGATCT 2 cut(s) 1640, 2485
BlnI CCTAGG 1 cut(s) 4063
BlpI GCTNAGC 2 cut(s) 560, 4182
BmcAI AGTACT 3 cut(s) 2412, 3028, 3436
BmeRI GACNNNNNGTC 1 cut(s) 1878
BmeT110I CYCGRG 1 cut(s) 445
BmgBI CACGTC 1 cut(s) 2099
BmrI ACTGGG 1 cut(s) 3424
BmsI GCATC 4 cut(s) 2663, 3657, 3834, 3902
BmuI ACTGGG 1 cut(s) 3424
BoxI GACNNNNGTC 1 cut(s) 2556
BpiI GAAGAC 4 cut(s) 323, 1830, 3101, 3688
BpmI CTGGAG 6 cut(s) 53, 1389, 1725, 2030, 2039, 4238
Bpu10I CCTNAGC 2 cut(s) 867, 1213
Bpu1102I GCTNAGC 2 cut(s) 560, 4182
BpuEI CTTGAG 3 cut(s) 1228, 4282, 4287
BpuMI CCSGG 2 cut(s) 128, 4001
Bsa29I ATCGAT 1 cut(s) 537
BsaBI GATNNNNATC 1 cut(s) 4206
BsaHI GRCGYC 2 cut(s) 3861, 3936
BsaI GGTCTC 2 cut(s) 1865, 2033
BsaWI WCCGGW 8 cut(s) 356, 1099, 1304, 1968, 3061, 3159, 3635, 3786
BsaXI ACNNNNNCTCC 2 cut(s) 3869, 3899
Bse118I RCCGGY 4 cut(s) 356, 3499, 3938, 4040
Bse21I CCTNAGG 3 cut(s) 385, 3839, 3956
Bse3DI GCAATG 2 cut(s) 926, 1933
Bse8I GATNNNNATC 1 cut(s) 4206
BseAI TCCGGA 2 cut(s) 1099, 1968
BseBI CCWGG 8 cut(s) 71, 1727, 1743, 1788, 2120, 2207, 3399, 3519
BseCI ATCGAT 1 cut(s) 537
BseGI GGATG 7 cut(s) 88, 987, 1795, 2350, 2654, 2964, 4129
BseJI GATNNNNATC 1 cut(s) 4206
BseMI GCAATG 2 cut(s) 926, 1933
BseRI GAGGAG 5 cut(s) 433, 606, 3542, 3908, 4292
BseSI GKGCMC 1 cut(s) 3308
BseYI CCCAGC 3 cut(s) 2658, 3989, 4157
BsgI GTGCAG 1 cut(s) 2728
Bsh1285I CGRYCG 3 cut(s) 668, 3823, 3910
BshNI GGYRCC 1 cut(s) 3935
BshTI ACCGGT 1 cut(s) 356
BshVI ATCGAT 1 cut(s) 537
BsiEI CGRYCG 3 cut(s) 668, 3823, 3910
BsiHKAI GWGCWC 4 cut(s) 614, 901, 3308, 3780
BsiHKCI CYCGRG 1 cut(s) 445
BslFI GGGAC 4 cut(s) 1303, 2269, 3745, 3857
BsmAI GTCTC 5 cut(s) 445, 699, 1865, 2033, 2089
BsmBI CGTCTC 1 cut(s) 2089
BsmFI GGGAC 4 cut(s) 1303, 2269, 3745, 3857
BsmI GAATGC 1 cut(s) 3360
Bso31I GGTCTC 2 cut(s) 1865, 2033
BsoBI CYCGRG 1 cut(s) 445
Bsp1286I GDGCHC 4 cut(s) 614, 901, 3308, 3780
Bsp13I TCCGGA 2 cut(s) 1099, 1968
Bsp1407I TGTACA 1 cut(s) 2917
Bsp1720I GCTNAGC 2 cut(s) 560, 4182
Bsp68I TCGCGA 1 cut(s) 4238
BspDI ATCGAT 1 cut(s) 537
BspEI TCCGGA 2 cut(s) 1099, 1968
BspHI TCATGA 1 cut(s) 3738
BspMAI CTGCAG 3 cut(s) 827, 2323, 2653
BspMI ACCTGC 5 cut(s) 2153, 2326, 3590, 3632, 4257
BspQI GCTCTTC 1 cut(s) 3677
BspT107I GGYRCC 1 cut(s) 3935
BspTNI GGTCTC 2 cut(s) 1865, 2033
BsrBI CCGCTC 1 cut(s) 4034
BsrDI GCAATG 2 cut(s) 926, 1933
BsrFI RCCGGY 4 cut(s) 356, 3499, 3938, 4040
BsrGI TGTACA 1 cut(s) 2917
BssAI RCCGGY 4 cut(s) 356, 3499, 3938, 4040
BssNI GRCGYC 2 cut(s) 3861, 3936
BssSI CACGAG 1 cut(s) 578
BssT1I CCWWGG 3 cut(s) 294, 1876, 4063
Bst2BI CACGAG 1 cut(s) 578
Bst2UI CCWGG 8 cut(s) 71, 1727, 1743, 1788, 2120, 2207, 3399, 3519
Bst4CI ACNGT 8 cut(s) 398, 458, 478, 680, 1542, 2038, 3385, 3848
Bst6I CTCTTC 5 cut(s) 294, 1612, 2617, 3264, 3677
BstACI GRCGYC 2 cut(s) 3861, 3936
BstAUI TGTACA 1 cut(s) 2917
BstEII GGTNACC 1 cut(s) 359
BstF5I GGATG 7 cut(s) 88, 987, 1795, 2350, 2654, 2964, 4129
BstH2I RGCGCY 1 cut(s) 3939
BstHHI GCGC 4 cut(s) 697, 895, 1031, 3938
BstMAI GTCTC 5 cut(s) 445, 699, 1865, 2033, 2089
BstMCI CGRYCG 3 cut(s) 668, 3823, 3910
BstNI CCWGG 8 cut(s) 71, 1727, 1743, 1788, 2120, 2207, 3399, 3519
BstNSI RCATGY 2 cut(s) 691, 1228
BstPAI GACNNNNGTC 1 cut(s) 2556
BstPI GGTNACC 1 cut(s) 359
BstSFI CTRYAG 5 cut(s) 457, 823, 2319, 2544, 2649
BstSLI GKGCMC 1 cut(s) 3308
BstV2I GAAGAC 4 cut(s) 323, 1830, 3101, 3688
BstX2I RGATCY 8 cut(s) 776, 955, 1640, 1830, 1954, 1980, 2485, 3926
BstYI RGATCY 8 cut(s) 776, 955, 1640, 1830, 1954, 1980, 2485, 3926
Bsu15I ATCGAT 1 cut(s) 537
Bsu36I CCTNAGG 3 cut(s) 385, 3839, 3956
BsuI GTATCC 1 cut(s) 1449
BsuTUI ATCGAT 1 cut(s) 537
BtgZI GCGATG 1 cut(s) 4253
BtrI CACGTC 1 cut(s) 2099
BtsCI GGATG 7 cut(s) 88, 987, 1795, 2350, 2654, 2964, 4129
BtsI GCAGTG 2 cut(s) 970, 3676
BtsIMutI CAGTG 9 cut(s) 407, 970, 1538, 1603, 2314, 2745, 3145, 3453, 3676
BtuMI TCGCGA 1 cut(s) 4238
BveI ACCTGC 5 cut(s) 2153, 2326, 3590, 3632, 4257
CciI TCATGA 1 cut(s) 3738
CfoI GCGC 4 cut(s) 697, 895, 1031, 3938
Cfr10I RCCGGY 4 cut(s) 356, 3499, 3938, 4040
ClaI ATCGAT 1 cut(s) 537
CpoI CGGWCCG 1 cut(s) 3789
CseI GACGC 3 cut(s) 3604, 3757, 3869
CspAI ACCGGT 1 cut(s) 356
CspCI CAANNNNNGTGG 2 cut(s) 132, 167
CspI CGGWCCG 1 cut(s) 3789
DinI GGCGCC 1 cut(s) 3937
DriI GACNNNNNGTC 1 cut(s) 1878
EaeI YGGCCR 1 cut(s) 2991
Eam1104I CTCTTC 5 cut(s) 294, 1612, 2617, 3264, 3677
Eam1105I GACNNNNNGTC 1 cut(s) 1878
EarI CTCTTC 5 cut(s) 294, 1612, 2617, 3264, 3677
EciI GGCGGA 4 cut(s) 3720, 3803, 4083, 4259
Ecl136II GAGCTC 2 cut(s) 899, 3778
Eco130I CCWWGG 3 cut(s) 294, 1876, 4063
Eco24I GRGCYC 2 cut(s) 901, 3780
Eco31I GGTCTC 2 cut(s) 1865, 2033
Eco53kI GAGCTC 2 cut(s) 899, 3778
Eco57I CTGAAG 1 cut(s) 909
Eco81I CCTNAGG 3 cut(s) 385, 3839, 3956
Eco88I CYCGRG 1 cut(s) 445
Eco91I GGTNACC 1 cut(s) 359
EcoICRI GAGCTC 2 cut(s) 899, 3778
EcoO109I RGGNCCY 3 cut(s) 136, 1163, 1523
EcoO65I GGTNACC 1 cut(s) 359
EcoRI GAATTC 2 cut(s) 2124, 3257
EcoRII CCWGG 8 cut(s) 69, 1725, 1741, 1786, 2118, 2205, 3397, 3517
EcoT14I CCWWGG 3 cut(s) 294, 1876, 4063
EcoT38I GRGCYC 2 cut(s) 901, 3780
EgeI GGCGCC 1 cut(s) 3937
EheI GGCGCC 1 cut(s) 3937
ErhI CCWWGG 3 cut(s) 294, 1876, 4063
Esp3I CGTCTC 1 cut(s) 2089
FalI AAGNNNNNCTT 2 cut(s) 2595, 2627
FaqI GGGAC 4 cut(s) 1303, 2269, 3745, 3857
FauI CCCGC 6 cut(s) 102, 126, 603, 700, 3031, 3770
FbaI TGATCA 4 cut(s) 180, 1858, 4143, 4188
FblI GTMKAC 3 cut(s) 3618, 3640, 3984
FokI GGATG 7 cut(s) 95, 974, 1782, 2337, 2641, 2951, 4136
FriOI GRGCYC 2 cut(s) 901, 3780
GlaI GCGC 4 cut(s) 696, 894, 1030, 3937
GsaI CCCAGC 3 cut(s) 2662, 3993, 4161
GsuI CTGGAG 6 cut(s) 53, 1389, 1725, 2030, 2039, 4238
HaeII RGCGCY 1 cut(s) 3939
HgaI GACGC 3 cut(s) 3604, 3757, 3869
HhaI GCGC 4 cut(s) 697, 895, 1031, 3938
Hin1I GRCGYC 2 cut(s) 3861, 3936
Hin6I GCGC 4 cut(s) 695, 893, 1029, 3936
HinP1I GCGC 4 cut(s) 695, 893, 1029, 3936
HincII GTYRAC 3 cut(s) 422, 1783, 3985
HindII GTYRAC 3 cut(s) 422, 1783, 3985
HindIII AAGCTT 4 cut(s) 557, 1005, 1484, 2996
Hpy99I CGWCG 9 cut(s) 529, 603, 1001, 3653, 3752, 3863, 3881, 3905, 4109
HpyAV CCTTC 9 cut(s) 298, 894, 1514, 1701, 2131, 2185, 2926, 3164, 4261
HpyCH4III ACNGT 8 cut(s) 398, 458, 478, 680, 1542, 2038, 3385, 3848
HpyCH4IV ACGT 7 cut(s) 424, 527, 1394, 2098, 3651, 3900, 4107
HpySE526I ACGT 7 cut(s) 424, 527, 1394, 2098, 3651, 3900, 4107
Hsp92I GRCGYC 2 cut(s) 3861, 3936
HspAI GCGC 4 cut(s) 695, 893, 1029, 3936
KasI GGCGCC 1 cut(s) 3935
Kpn2I TCCGGA 2 cut(s) 1099, 1968
KroI GCCGGC 1 cut(s) 3938
KroNI GCCGGC 1 cut(s) 3940
Ksp22I TGATCA 4 cut(s) 180, 1858, 4143, 4188
LguI GCTCTTC 1 cut(s) 3677
LweI GCATC 4 cut(s) 2663, 3657, 3834, 3902
MaeII ACGT 7 cut(s) 424, 527, 1394, 2098, 3651, 3900, 4107
MaeIII GTNAC 6 cut(s) 359, 478, 1145, 1897, 3385, 3401
MbiI CCGCTC 1 cut(s) 4034
MfeI CAATTG 3 cut(s) 1179, 2642, 3045
MflI RGATCY 8 cut(s) 776, 955, 1640, 1830, 1954, 1980, 2485, 3926
MhlI GDGCHC 4 cut(s) 614, 901, 3308, 3780
MlsI TGGCCA 1 cut(s) 2993
MluNI TGGCCA 1 cut(s) 2993
Mly113I GGCGCC 1 cut(s) 3936
MlyI GAGTC 5 cut(s) 977, 2803, 2948, 3236, 3596
MmeI TCCRAC 7 cut(s) 236, 2102, 2378, 3634, 3904, 3954, 4179
Mox20I TGGCCA 1 cut(s) 2993
MroI TCCGGA 2 cut(s) 1099, 1968
MroNI GCCGGC 1 cut(s) 3938
MroXI GAANNNNTTC 1 cut(s) 3358
MscI TGGCCA 1 cut(s) 2993
MseI TTAA 8 cut(s) 789, 930, 1337, 1623, 1812, 1938, 2613, 2757
MslI CAYNNNNRTG 3 cut(s) 2925, 3210, 3458
Msp20I TGGCCA 1 cut(s) 2993
MspA1I CMGCKG 3 cut(s) 717, 1240, 3765
MunI CAATTG 3 cut(s) 1179, 2642, 3045
Mva1269I GAATGC 1 cut(s) 3360
MvaI CCWGG 8 cut(s) 71, 1727, 1743, 1788, 2120, 2207, 3399, 3519
NaeI GCCGGC 1 cut(s) 3940
NarI GGCGCC 1 cut(s) 3936
NciI CCSGG 2 cut(s) 128, 4001
NgoMIV GCCGGC 1 cut(s) 3938
NmeAIII GCCGAG 1 cut(s) 3995
NmuCI GTSAC 2 cut(s) 359, 1897
NruI TCGCGA 1 cut(s) 4238
NspI RCATGY 2 cut(s) 691, 1228
PaeI GCATGC 1 cut(s) 691
PagI TCATGA 1 cut(s) 3738
PaqCI CACCTGC 4 cut(s) 2153, 2326, 3590, 3632
PciI ACATGT 1 cut(s) 1224
PciSI GCTCTTC 1 cut(s) 3677
PcsI WCGNNNNNNNCGW 1 cut(s) 3657
PctI GAATGC 1 cut(s) 3360
PdiI GCCGGC 1 cut(s) 3940
PdmI GAANNNNTTC 1 cut(s) 3358
PflMI CCANNNNNTGG 1 cut(s) 965
PfoI TCCNGGA 1 cut(s) 69
PinAI ACCGGT 1 cut(s) 356
Ple19I CGATCG 1 cut(s) 3823
PleI GAGTC 5 cut(s) 977, 2802, 2948, 3236, 3596
PluTI GGCGCC 1 cut(s) 3939
PpsI GAGTC 5 cut(s) 977, 2802, 2948, 3236, 3596
PpuMI RGGWCCY 3 cut(s) 136, 1163, 1523
PscI ACATGT 1 cut(s) 1224
PshAI GACNNNNGTC 1 cut(s) 2556
PshBI ATTAAT 1 cut(s) 789
Psp124BI GAGCTC 2 cut(s) 901, 3780
Psp1406I AACGTT 1 cut(s) 1394
Psp5II RGGWCCY 3 cut(s) 136, 1163, 1523
Psp6I CCWGG 8 cut(s) 69, 1725, 1741, 1786, 2118, 2205, 3397, 3517
PspEI GGTNACC 1 cut(s) 359
PspFI CCCAGC 3 cut(s) 2658, 3989, 4157
PspGI CCWGG 8 cut(s) 69, 1725, 1741, 1786, 2118, 2205, 3397, 3517
PspPPI RGGWCCY 3 cut(s) 136, 1163, 1523
PstI CTGCAG 3 cut(s) 827, 2323, 2653
PsuI RGATCY 8 cut(s) 776, 955, 1640, 1830, 1954, 1980, 2485, 3926
PvuI CGATCG 1 cut(s) 3823
PvuII CAGCTG 2 cut(s) 717, 1240
RgaI GCGATCGC 1 cut(s) 3823
RruI TCGCGA 1 cut(s) 4238
RseI CAYNNNNRTG 3 cut(s) 2925, 3210, 3458
Rsr2I CGGWCCG 1 cut(s) 3789
RsrII CGGWCCG 1 cut(s) 3789
SacI GAGCTC 2 cut(s) 901, 3780
SalI GTCGAC 1 cut(s) 3983
SapI GCTCTTC 1 cut(s) 3677
SaqAI TTAA 8 cut(s) 789, 930, 1337, 1623, 1812, 1938, 2613, 2757
ScaI AGTACT 3 cut(s) 2412, 3028, 3436
SchI GAGTC 5 cut(s) 977, 2803, 2948, 3236, 3596
SduI GDGCHC 4 cut(s) 614, 901, 3308, 3780
SfaAI GCGATCGC 1 cut(s) 3823
SfaNI GCATC 4 cut(s) 2663, 3657, 3834, 3902
SfcI CTRYAG 5 cut(s) 457, 823, 2319, 2544, 2649
SfoI GGCGCC 1 cut(s) 3937
SgfI GCGATCGC 1 cut(s) 3823
SgrAI CRCCGGYG 1 cut(s) 3499
SmiMI CAYNNNNRTG 3 cut(s) 2925, 3210, 3458
SmlI CTYRAG 3 cut(s) 1207, 4261, 4302
SmoI CTYRAG 3 cut(s) 1207, 4261, 4302
SpeI ACTAGT 2 cut(s) 2357, 3235
SphI GCATGC 1 cut(s) 691
SspDI GGCGCC 1 cut(s) 3935
SspI AATATT 4 cut(s) 1675, 1699, 1715, 2944
SstI GAGCTC 2 cut(s) 901, 3780
StyI CCWWGG 3 cut(s) 294, 1876, 4063
TaaI ACNGT 8 cut(s) 398, 458, 478, 680, 1542, 2038, 3385, 3848
TaiI ACGT 7 cut(s) 427, 530, 1397, 2101, 3654, 3903, 4110
TaqII GACCGA 3 cut(s) 421, 3793, 3924
TatI WGTACW 4 cut(s) 2410, 2917, 3026, 3434
TauI GCSGC 5 cut(s) 3596, 3648, 3705, 3819, 4081
Tru1I TTAA 8 cut(s) 789, 930, 1337, 1623, 1812, 1938, 2613, 2757
Tru9I TTAA 8 cut(s) 789, 930, 1337, 1623, 1812, 1938, 2613, 2757
TscAI CASTG 9 cut(s) 407, 970, 1545, 1603, 2314, 2752, 3145, 3460, 3683
TseFI GTSAC 2 cut(s) 359, 1897
Tsp45I GTSAC 2 cut(s) 359, 1897
TspGWI ACGGA 1 cut(s) 497
TspRI CASTG 9 cut(s) 407, 970, 1545, 1603, 2314, 2752, 3145, 3460, 3683
Van91I CCANNNNNTGG 1 cut(s) 965
VneI GTGCAC 1 cut(s) 3304
VspI ATTAAT 1 cut(s) 789
XapI RAATTY 8 cut(s) 1330, 1339, 2124, 2229, 2728, 3151, 3257, 3419
XbaI TCTAGA 2 cut(s) 1645, 3127
XceI RCATGY 2 cut(s) 691, 1228
XcmI CCANNNNNNNNNTGG 2 cut(s) 680, 1802
XmaJI CCTAGG 1 cut(s) 4063
XmiI GTMKAC 3 cut(s) 3618, 3640, 3984
XmnI GAANNNNTTC 1 cut(s) 3358
ZrmI AGTACT 3 cut(s) 2412, 3028, 3436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.