TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 172, 262, 320 |
| AcoI | YGGCCR | 1 cut(s) | 552 |
| AcsI | RAATTY | 1 cut(s) | 389 |
| AfaI | GTAC | 5 cut(s) | 98, 339, 538, 560, 656 |
| AfeI | AGCGCT | 1 cut(s) | 103 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 243, 412 |
| AflIII | ACRYGT | 1 cut(s) | 526 |
| AgsI | TTSAA | 3 cut(s) | 319, 394, 509 |
| AjiI | CACGTC | 1 cut(s) | 529 |
| AjnI | CCWGG | 2 cut(s) | 405, 411 |
| AluBI | AGCT | 3 cut(s) | 145, 357, 443 |
| AluI | AGCT | 3 cut(s) | 145, 357, 443 |
| AlwI | GGATC | 3 cut(s) | 172, 262, 320 |
| Aor51HI | AGCGCT | 1 cut(s) | 103 |
| AoxI | GGCC | 1 cut(s) | 552 |
| ApeKI | GCWGC | 1 cut(s) | 440 |
| ApoI | RAATTY | 1 cut(s) | 389 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 27, 59 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AspS9I | GGNCC | 2 cut(s) | 403, 409 |
| AsuHPI | GGTGA | 4 cut(s) | 16, 74, 118, 159 |
| AvaII | GGWCC | 2 cut(s) | 403, 409 |
| BbsI | GAAGAC | 1 cut(s) | 428 |
| BbvI | GCAGC | 1 cut(s) | 452 |
| BciT130I | CCWGG | 2 cut(s) | 407, 413 |
| BciVI | GTATCC | 1 cut(s) | 61 |
| BclI | TGATCA | 2 cut(s) | 6, 139 |
| BfaI | CTAG | 1 cut(s) | 444 |
| BfoI | RGCGCY | 1 cut(s) | 105 |
| BfuI | GTATCC | 1 cut(s) | 61 |
| BisI | GCNGC | 1 cut(s) | 441 |
| BlsI | GCNGC | 1 cut(s) | 442 |
| Bme1390I | CCNGG | 2 cut(s) | 407, 413 |
| Bme18I | GGWCC | 2 cut(s) | 403, 409 |
| BmgBI | CACGTC | 1 cut(s) | 529 |
| BmgT120I | GGNCC | 2 cut(s) | 403, 409 |
| BmrFI | CCNGG | 2 cut(s) | 407, 413 |
| BmsI | GCATC | 2 cut(s) | 469, 481 |
| BpiI | GAAGAC | 1 cut(s) | 428 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 461, 493 |
| BsaBI | GATNNNNATC | 1 cut(s) | 471 |
| BsaJI | CCNNGG | 1 cut(s) | 330 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 218, 248 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 243, 412 |
| Bse1I | ACTGG | 2 cut(s) | 308, 486 |
| Bse8I | GATNNNNATC | 1 cut(s) | 471 |
| BseBI | CCWGG | 2 cut(s) | 407, 413 |
| BseDI | CCNNGG | 1 cut(s) | 330 |
| BseGI | GGATG | 4 cut(s) | 142, 259, 340, 553 |
| BseJI | GATNNNNATC | 1 cut(s) | 471 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 243, 412 |
| BseNI | ACTGG | 2 cut(s) | 308, 486 |
| BseRI | GAGGAG | 2 cut(s) | 168, 226 |
| BseXI | GCAGC | 1 cut(s) | 452 |
| BshFI | GGCC | 1 cut(s) | 554 |
| BslFI | GGGAC | 1 cut(s) | 381 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 243, 412 |
| BsmFI | GGGAC | 1 cut(s) | 381 |
| BsnI | GGCC | 1 cut(s) | 554 |
| Bsp1407I | TGTACA | 1 cut(s) | 96 |
| Bsp143I | GATC | 5 cut(s) | 6, 139, 177, 267, 325 |
| BspANI | GGCC | 1 cut(s) | 554 |
| BspPI | GGATC | 3 cut(s) | 172, 262, 320 |
| BsrGI | TGTACA | 1 cut(s) | 96 |
| BsrI | ACTGG | 2 cut(s) | 308, 486 |
| BssECI | CCNNGG | 1 cut(s) | 330 |
| BssMI | GATC | 5 cut(s) | 6, 139, 177, 267, 325 |
| Bst2UI | CCWGG | 2 cut(s) | 407, 413 |
| Bst4CI | ACNGT | 2 cut(s) | 195, 536 |
| Bst6I | CTCTTC | 1 cut(s) | 437 |
| BstAUI | TGTACA | 1 cut(s) | 96 |
| BstC8I | GCNNGC | 1 cut(s) | 588 |
| BstF5I | GGATG | 4 cut(s) | 142, 259, 340, 553 |
| BstH2I | RGCGCY | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstKTI | GATC | 5 cut(s) | 9, 142, 180, 270, 328 |
| BstMBI | GATC | 5 cut(s) | 6, 139, 177, 267, 325 |
| BstNI | CCWGG | 2 cut(s) | 407, 413 |
| BstSCI | CCNGG | 2 cut(s) | 405, 411 |
| BstV1I | GCAGC | 1 cut(s) | 452 |
| BstV2I | GAAGAC | 1 cut(s) | 428 |
| BstX2I | RGATCY | 1 cut(s) | 267 |
| BstYI | RGATCY | 1 cut(s) | 267 |
| BsuI | GTATCC | 1 cut(s) | 61 |
| BsuRI | GGCC | 1 cut(s) | 554 |
| BtgZI | GCGATG | 1 cut(s) | 458 |
| BtrI | CACGTC | 1 cut(s) | 529 |
| BtsCI | GGATG | 4 cut(s) | 142, 259, 340, 553 |
| Cac8I | GCNNGC | 1 cut(s) | 588 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Cfr13I | GGNCC | 2 cut(s) | 403, 409 |
| CsiI | ACCWGGT | 1 cut(s) | 405 |
| Csp6I | GTAC | 5 cut(s) | 97, 338, 537, 559, 655 |
| CviAII | CATG | 2 cut(s) | 41, 133 |
| CviJI | RGCY | 5 cut(s) | 145, 357, 443, 554, 639 |
| CviKI_1 | RGCY | 5 cut(s) | 145, 357, 443, 554, 639 |
| CviQI | GTAC | 5 cut(s) | 97, 338, 537, 559, 655 |
| DpnI | GATC | 5 cut(s) | 8, 141, 179, 269, 327 |
| DpnII | GATC | 5 cut(s) | 6, 139, 177, 267, 325 |
| EaeI | YGGCCR | 1 cut(s) | 552 |
| Eam1104I | CTCTTC | 1 cut(s) | 437 |
| EarI | CTCTTC | 1 cut(s) | 437 |
| Eco47I | GGWCC | 2 cut(s) | 403, 409 |
| Eco47III | AGCGCT | 1 cut(s) | 103 |
| EcoRII | CCWGG | 2 cut(s) | 405, 411 |
| FaeI | CATG | 2 cut(s) | 44, 136 |
| FaiI | YATR | 9 cut(s) | 27, 31, 42, 134, 149, 231, 513, 515, 632 |
| FaqI | GGGAC | 1 cut(s) | 381 |
| FatI | CATG | 2 cut(s) | 40, 132 |
| FbaI | TGATCA | 2 cut(s) | 6, 139 |
| Fnu4HI | GCNGC | 1 cut(s) | 441 |
| FokI | GGATG | 4 cut(s) | 149, 266, 347, 560 |
| Fsp4HI | GCNGC | 1 cut(s) | 441 |
| FspBI | CTAG | 1 cut(s) | 444 |
| GlaI | GCGC | 1 cut(s) | 103 |
| GluI | GCNGC | 1 cut(s) | 441 |
| HaeII | RGCGCY | 1 cut(s) | 105 |
| HaeIII | GGCC | 1 cut(s) | 554 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin1II | CATG | 2 cut(s) | 44, 136 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HincII | GTYRAC | 1 cut(s) | 532 |
| HindII | GTYRAC | 1 cut(s) | 532 |
| HinfI | GANTC | 2 cut(s) | 120, 482 |
| HphI | GGTGA | 4 cut(s) | 16, 74, 118, 159 |
| Hpy166II | GTNNAC | 1 cut(s) | 532 |
| Hpy188I | TCNGA | 4 cut(s) | 223, 334, 481, 520 |
| Hpy188III | TCNNGA | 4 cut(s) | 265, 380, 464, 693 |
| Hpy8I | GTNNAC | 1 cut(s) | 532 |
| HpyAV | CCTTC | 2 cut(s) | 109, 139 |
| HpyCH4III | ACNGT | 2 cut(s) | 195, 536 |
| HpyCH4IV | ACGT | 1 cut(s) | 528 |
| HpyCH4V | TGCA | 2 cut(s) | 279, 586 |
| HpySE526I | ACGT | 1 cut(s) | 528 |
| Hsp92II | CATG | 2 cut(s) | 44, 136 |
| HspAI | GCGC | 1 cut(s) | 102 |
| Ksp22I | TGATCA | 2 cut(s) | 6, 139 |
| Kzo9I | GATC | 5 cut(s) | 6, 139, 177, 267, 325 |
| Lsp1109I | GCAGC | 1 cut(s) | 452 |
| LweI | GCATC | 2 cut(s) | 469, 481 |
| MabI | ACCWGGT | 1 cut(s) | 405 |
| MaeI | CTAG | 1 cut(s) | 444 |
| MaeII | ACGT | 1 cut(s) | 528 |
| MaeIII | GTNAC | 2 cut(s) | 89, 124 |
| MalI | GATC | 5 cut(s) | 8, 141, 179, 269, 327 |
| MboI | GATC | 5 cut(s) | 6, 139, 177, 267, 325 |
| MboII | GAAGA | 6 cut(s) | 170, 211, 307, 424, 433, 681 |
| MfeI | CAATTG | 2 cut(s) | 599, 609 |
| MflI | RGATCY | 1 cut(s) | 267 |
| MluCI | AATT | 5 cut(s) | 79, 389, 599, 609, 646 |
| MseI | TTAA | 1 cut(s) | 615 |
| MslI | CAYNNNNRTG | 2 cut(s) | 131, 465 |
| MspR9I | CCNGG | 2 cut(s) | 407, 413 |
| MunI | CAATTG | 2 cut(s) | 599, 609 |
| MvaI | CCWGG | 2 cut(s) | 407, 413 |
| NdeII | GATC | 5 cut(s) | 6, 139, 177, 267, 325 |
| NlaIII | CATG | 2 cut(s) | 44, 136 |
| NmeAIII | GCCGAG | 1 cut(s) | 580 |
| NmuCI | GTSAC | 2 cut(s) | 89, 124 |
| PfeI | GAWTC | 2 cut(s) | 120, 482 |
| PflFI | GACNNNGTC | 1 cut(s) | 407 |
| PfoI | TCCNGGA | 1 cut(s) | 411 |
| PkrI | GCNGC | 1 cut(s) | 442 |
| Psp6I | CCWGG | 2 cut(s) | 405, 411 |
| PspGI | CCWGG | 2 cut(s) | 405, 411 |
| PspPI | GGNCC | 2 cut(s) | 403, 409 |
| PsuI | RGATCY | 1 cut(s) | 267 |
| PsyI | GACNNNGTC | 1 cut(s) | 407 |
| RsaI | GTAC | 5 cut(s) | 98, 339, 538, 560, 656 |
| RsaNI | GTAC | 5 cut(s) | 97, 338, 537, 559, 655 |
| RseI | CAYNNNNRTG | 2 cut(s) | 131, 465 |
| SaqAI | TTAA | 1 cut(s) | 615 |
| SatI | GCNGC | 1 cut(s) | 441 |
| Sau3AI | GATC | 5 cut(s) | 6, 139, 177, 267, 325 |
| Sau96I | GGNCC | 2 cut(s) | 403, 409 |
| ScrFI | CCNGG | 2 cut(s) | 407, 413 |
| SetI | ASST | 9 cut(s) | 64, 91, 131, 147, 355, 359, 411, 445, 531 |
| SexAI | ACCWGGT | 1 cut(s) | 405 |
| SfaNI | GCATC | 2 cut(s) | 469, 481 |
| SinI | GGWCC | 2 cut(s) | 403, 409 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 131, 465 |
| Sse9I | AATT | 5 cut(s) | 79, 389, 599, 609, 646 |
| SspMI | CTAG | 1 cut(s) | 444 |
| StyD4I | CCNGG | 2 cut(s) | 405, 411 |
| TaaI | ACNGT | 2 cut(s) | 195, 536 |
| TaiI | ACGT | 1 cut(s) | 531 |
| TaqI | TCGA | 5 cut(s) | 189, 197, 273, 324, 465 |
| TasI | AATT | 5 cut(s) | 79, 389, 599, 609, 646 |
| TatI | WGTACW | 2 cut(s) | 96, 536 |
| TfiI | GAWTC | 2 cut(s) | 120, 482 |
| Tru1I | TTAA | 1 cut(s) | 615 |
| Tru9I | TTAA | 1 cut(s) | 615 |
| TseFI | GTSAC | 2 cut(s) | 89, 124 |
| TseI | GCWGC | 1 cut(s) | 440 |
| Tsp45I | GTSAC | 2 cut(s) | 89, 124 |
| TspDTI | ATGAA | 3 cut(s) | 121, 270, 656 |
| Tth111I | GACNNNGTC | 1 cut(s) | 407 |
| VpaK11BI | GGWCC | 2 cut(s) | 403, 409 |
| XapI | RAATTY | 1 cut(s) | 389 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 247 |
| XspI | CTAG | 1 cut(s) | 444 |