DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 90 |
| AccII | CGCG | 1 cut(s) | 208 |
| AclI | AACGTT | 1 cut(s) | 15 |
| AclWI | GGATC | 1 cut(s) | 611 |
| AcsI | RAATTY | 3 cut(s) | 281, 341, 653 |
| AfaI | GTAC | 1 cut(s) | 403 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 90 |
| AgsI | TTSAA | 5 cut(s) | 8, 20, 137, 341, 653 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 454, 486 |
| Alw21I | GWGCWC | 2 cut(s) | 361, 534 |
| AlwI | GGATC | 1 cut(s) | 611 |
| AoxI | GGCC | 2 cut(s) | 54, 95 |
| ApeKI | GCWGC | 2 cut(s) | 482, 632 |
| ApoI | RAATTY | 3 cut(s) | 281, 341, 653 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 398, 430 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 15 |
| AsuHPI | GGTGA | 1 cut(s) | 457 |
| BbsI | GAAGAC | 1 cut(s) | 421 |
| Bbv12I | GWGCWC | 2 cut(s) | 361, 534 |
| BbvI | GCAGC | 2 cut(s) | 469, 644 |
| BccI | CCATC | 1 cut(s) | 392 |
| BceAI | ACGGC | 2 cut(s) | 41, 233 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 595, 629 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BclI | TGATCA | 2 cut(s) | 244, 609 |
| BfaI | CTAG | 1 cut(s) | 486 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BisI | GCNGC | 2 cut(s) | 483, 633 |
| BlsI | GCNGC | 2 cut(s) | 484, 634 |
| BmsI | GCATC | 2 cut(s) | 106, 388 |
| BpiI | GAAGAC | 1 cut(s) | 421 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 505, 537 |
| BpmI | CTGGAG | 2 cut(s) | 431, 590 |
| BpuEI | CTTGAG | 2 cut(s) | 355, 463 |
| Bsa29I | ATCGAT | 1 cut(s) | 615 |
| BsaJI | CCNNGG | 1 cut(s) | 215 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 292, 322, 348, 378 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 90 |
| Bse1I | ACTGG | 2 cut(s) | 414, 527 |
| BseCI | ATCGAT | 1 cut(s) | 615 |
| BseDI | CCNNGG | 1 cut(s) | 215 |
| BseGI | GGATG | 1 cut(s) | 403 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 90 |
| BseNI | ACTGG | 2 cut(s) | 414, 527 |
| BseRI | GAGGAG | 1 cut(s) | 460 |
| BseXI | GCAGC | 2 cut(s) | 469, 644 |
| Bsh1236I | CGCG | 1 cut(s) | 208 |
| BshFI | GGCC | 2 cut(s) | 56, 97 |
| BshVI | ATCGAT | 1 cut(s) | 615 |
| BsiHKAI | GWGCWC | 2 cut(s) | 361, 534 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 90 |
| BsmI | GAATGC | 1 cut(s) | 322 |
| BsnI | GGCC | 2 cut(s) | 56, 97 |
| Bsp1286I | GDGCHC | 2 cut(s) | 361, 534 |
| Bsp143I | GATC | 4 cut(s) | 244, 346, 609, 616 |
| BspANI | GGCC | 2 cut(s) | 56, 97 |
| BspDI | ATCGAT | 1 cut(s) | 615 |
| BspFNI | CGCG | 1 cut(s) | 208 |
| BspPI | GGATC | 1 cut(s) | 611 |
| BsrI | ACTGG | 2 cut(s) | 414, 527 |
| BssECI | CCNNGG | 1 cut(s) | 215 |
| BssMI | GATC | 4 cut(s) | 244, 346, 609, 616 |
| Bst4CI | ACNGT | 1 cut(s) | 492 |
| Bst6I | CTCTTC | 1 cut(s) | 506 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 125 |
| BstC8I | GCNNGC | 1 cut(s) | 534 |
| BstDSI | CCRYGG | 1 cut(s) | 215 |
| BstEII | GGTNACC | 1 cut(s) | 298 |
| BstF5I | GGATG | 1 cut(s) | 403 |
| BstFNI | CGCG | 1 cut(s) | 208 |
| BstKTI | GATC | 4 cut(s) | 247, 349, 612, 619 |
| BstMBI | GATC | 4 cut(s) | 244, 346, 609, 616 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 125 |
| BstPI | GGTNACC | 1 cut(s) | 298 |
| BstUI | CGCG | 1 cut(s) | 208 |
| BstV1I | GCAGC | 2 cut(s) | 469, 644 |
| BstV2I | GAAGAC | 1 cut(s) | 421 |
| Bsu15I | ATCGAT | 1 cut(s) | 615 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BsuRI | GGCC | 2 cut(s) | 56, 97 |
| BsuTUI | ATCGAT | 1 cut(s) | 615 |
| BtgI | CCRYGG | 1 cut(s) | 215 |
| BtsCI | GGATG | 1 cut(s) | 403 |
| BtsIMutI | CAGTG | 1 cut(s) | 534 |
| Cac8I | GCNNGC | 1 cut(s) | 534 |
| ClaI | ATCGAT | 1 cut(s) | 615 |
| Csp6I | GTAC | 1 cut(s) | 402 |
| CviAII | CATG | 4 cut(s) | 125, 332, 479, 607 |
| CviJI | RGCY | 3 cut(s) | 56, 97, 220 |
| CviKI_1 | RGCY | 3 cut(s) | 56, 97, 220 |
| CviQI | GTAC | 1 cut(s) | 402 |
| DpnI | GATC | 4 cut(s) | 246, 348, 611, 618 |
| DpnII | GATC | 4 cut(s) | 244, 346, 609, 616 |
| DraI | TTTAAA | 2 cut(s) | 109, 286 |
| Eam1104I | CTCTTC | 1 cut(s) | 506 |
| EarI | CTCTTC | 1 cut(s) | 506 |
| Eco91I | GGTNACC | 1 cut(s) | 298 |
| EcoO65I | GGTNACC | 1 cut(s) | 298 |
| EcoRI | GAATTC | 1 cut(s) | 341 |
| FaeI | CATG | 4 cut(s) | 128, 335, 482, 610 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 287, 319 |
| FatI | CATG | 4 cut(s) | 124, 331, 478, 606 |
| FbaI | TGATCA | 2 cut(s) | 244, 609 |
| Fnu4HI | GCNGC | 2 cut(s) | 483, 633 |
| FokI | GGATG | 1 cut(s) | 410 |
| Fsp4HI | GCNGC | 2 cut(s) | 483, 633 |
| FspBI | CTAG | 1 cut(s) | 486 |
| GluI | GCNGC | 2 cut(s) | 483, 633 |
| GsuI | CTGGAG | 2 cut(s) | 431, 590 |
| HaeIII | GGCC | 2 cut(s) | 56, 97 |
| Hin1II | CATG | 4 cut(s) | 128, 335, 482, 610 |
| HinfI | GANTC | 5 cut(s) | 140, 272, 413, 462, 576 |
| HphI | GGTGA | 1 cut(s) | 457 |
| Hpy166II | GTNNAC | 1 cut(s) | 367 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 312 |
| Hpy188III | TCNNGA | 6 cut(s) | 35, 84, 338, 372, 569, 660 |
| Hpy8I | GTNNAC | 1 cut(s) | 367 |
| Hpy99I | CGWCG | 1 cut(s) | 62 |
| HpyAV | CCTTC | 2 cut(s) | 313, 388 |
| HpyCH4III | ACNGT | 1 cut(s) | 492 |
| HpyCH4IV | ACGT | 2 cut(s) | 15, 156 |
| HpyCH4V | TGCA | 4 cut(s) | 119, 162, 172, 606 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 125 |
| HpySE526I | ACGT | 2 cut(s) | 15, 156 |
| Hsp92II | CATG | 4 cut(s) | 128, 335, 482, 610 |
| Ksp22I | TGATCA | 2 cut(s) | 244, 609 |
| Kzo9I | GATC | 4 cut(s) | 244, 346, 609, 616 |
| LmnI | GCTCC | 2 cut(s) | 356, 571 |
| LpnPI | CCDG | 7 cut(s) | 38, 97, 206, 330, 395, 540, 554 |
| Lsp1109I | GCAGC | 2 cut(s) | 469, 644 |
| LweI | GCATC | 2 cut(s) | 106, 388 |
| MaeI | CTAG | 1 cut(s) | 486 |
| MaeII | ACGT | 2 cut(s) | 15, 156 |
| MaeIII | GTNAC | 2 cut(s) | 298, 577 |
| MalI | GATC | 4 cut(s) | 246, 348, 611, 618 |
| MboI | GATC | 4 cut(s) | 244, 346, 609, 616 |
| MboII | GAAGA | 4 cut(s) | 20, 149, 421, 523 |
| MhlI | GDGCHC | 2 cut(s) | 361, 534 |
| MluCI | AATT | 6 cut(s) | 120, 132, 281, 341, 625, 653 |
| MlyI | GAGTC | 2 cut(s) | 422, 585 |
| MnlI | CCTC | 5 cut(s) | 63, 87, 318, 438, 445 |
| MroXI | GAANNNNTTC | 1 cut(s) | 15 |
| MseI | TTAA | 6 cut(s) | 108, 285, 294, 387, 458, 551 |
| Mva1269I | GAATGC | 1 cut(s) | 322 |
| MvnI | CGCG | 1 cut(s) | 208 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 125 |
| NdeII | GATC | 4 cut(s) | 244, 346, 609, 616 |
| NlaIII | CATG | 4 cut(s) | 128, 335, 482, 610 |
| NmuCI | GTSAC | 1 cut(s) | 577 |
| PctI | GAATGC | 1 cut(s) | 322 |
| PdmI | GAANNNNTTC | 1 cut(s) | 15 |
| PfeI | GAWTC | 3 cut(s) | 140, 272, 462 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 90 |
| PkrI | GCNGC | 2 cut(s) | 484, 634 |
| PleI | GAGTC | 2 cut(s) | 421, 584 |
| PpsI | GAGTC | 2 cut(s) | 421, 584 |
| Psp1406I | AACGTT | 1 cut(s) | 15 |
| PspEI | GGTNACC | 1 cut(s) | 298 |
| RsaI | GTAC | 1 cut(s) | 403 |
| RsaNI | GTAC | 1 cut(s) | 402 |
| SaqAI | TTAA | 6 cut(s) | 108, 285, 294, 387, 458, 551 |
| SatI | GCNGC | 2 cut(s) | 483, 633 |
| Sau3AI | GATC | 4 cut(s) | 244, 346, 609, 616 |
| SchI | GAGTC | 2 cut(s) | 422, 585 |
| SduI | GDGCHC | 2 cut(s) | 361, 534 |
| SetI | ASST | 6 cut(s) | 18, 25, 159, 300, 305, 470 |
| SfaNI | GCATC | 2 cut(s) | 106, 388 |
| SmlI | CTYRAG | 2 cut(s) | 370, 442 |
| SmoI | CTYRAG | 2 cut(s) | 370, 442 |
| Sse9I | AATT | 6 cut(s) | 120, 132, 281, 341, 625, 653 |
| SspMI | CTAG | 1 cut(s) | 486 |
| TaaI | ACNGT | 1 cut(s) | 492 |
| TaiI | ACGT | 2 cut(s) | 18, 159 |
| TaqI | TCGA | 3 cut(s) | 227, 345, 615 |
| TasI | AATT | 6 cut(s) | 120, 132, 281, 341, 625, 653 |
| TfiI | GAWTC | 3 cut(s) | 140, 272, 462 |
| Tru1I | TTAA | 6 cut(s) | 108, 285, 294, 387, 458, 551 |
| Tru9I | TTAA | 6 cut(s) | 108, 285, 294, 387, 458, 551 |
| TscAI | CASTG | 1 cut(s) | 534 |
| TseFI | GTSAC | 1 cut(s) | 577 |
| TseI | GCWGC | 2 cut(s) | 482, 632 |
| Tsp45I | GTSAC | 1 cut(s) | 577 |
| TspDTI | ATGAA | 4 cut(s) | 113, 285, 320, 421 |
| TspGWI | ACGGA | 1 cut(s) | 251 |
| TspRI | CASTG | 1 cut(s) | 534 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 90 |
| XapI | RAATTY | 3 cut(s) | 281, 341, 653 |
| XmnI | GAANNNNTTC | 1 cut(s) | 15 |
| XspI | CTAG | 1 cut(s) | 486 |