DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 51 |
| AclI | AACGTT | 1 cut(s) | 183 |
| AclWI | GGATC | 4 cut(s) | 301, 342, 344, 357 |
| AfaI | GTAC | 2 cut(s) | 362, 403 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 161 |
| AflIII | ACRYGT | 1 cut(s) | 373 |
| AluBI | AGCT | 1 cut(s) | 134 |
| AluI | AGCT | 1 cut(s) | 134 |
| AlwI | GGATC | 4 cut(s) | 301, 342, 344, 357 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 337 |
| ApeKI | GCWGC | 1 cut(s) | 419 |
| AsuII | TTCGAA | 1 cut(s) | 129 |
| BamHI | GGATCC | 1 cut(s) | 349 |
| BbvI | GCAGC | 1 cut(s) | 406 |
| BccI | CCATC | 1 cut(s) | 389 |
| BisI | GCNGC | 1 cut(s) | 420 |
| BlsI | GCNGC | 1 cut(s) | 421 |
| BmiI | GGNNCC | 1 cut(s) | 351 |
| Bpu14I | TTCGAA | 1 cut(s) | 129 |
| BsaBI | GATNNNNATC | 1 cut(s) | 239 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 161 |
| Bse1I | ACTGG | 1 cut(s) | 155 |
| Bse8I | GATNNNNATC | 1 cut(s) | 239 |
| BseGI | GGATG | 1 cut(s) | 400 |
| BseJI | GATNNNNATC | 1 cut(s) | 239 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 161 |
| BseNI | ACTGG | 1 cut(s) | 155 |
| BseXI | GCAGC | 1 cut(s) | 406 |
| Bsh1236I | CGCG | 1 cut(s) | 51 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 161 |
| Bsp119I | TTCGAA | 1 cut(s) | 129 |
| Bsp1407I | TGTACA | 1 cut(s) | 360 |
| Bsp143I | GATC | 4 cut(s) | 21, 293, 334, 349 |
| BspFNI | CGCG | 1 cut(s) | 51 |
| BspLI | GGNNCC | 1 cut(s) | 351 |
| BspPI | GGATC | 4 cut(s) | 301, 342, 344, 357 |
| BspT104I | TTCGAA | 1 cut(s) | 129 |
| BsrGI | TGTACA | 1 cut(s) | 360 |
| BsrI | ACTGG | 1 cut(s) | 155 |
| BssMI | GATC | 4 cut(s) | 21, 293, 334, 349 |
| Bst4CI | ACNGT | 3 cut(s) | 112, 221, 324 |
| BstAUI | TGTACA | 1 cut(s) | 360 |
| BstBI | TTCGAA | 1 cut(s) | 129 |
| BstF5I | GGATG | 1 cut(s) | 400 |
| BstFNI | CGCG | 1 cut(s) | 51 |
| BstKTI | GATC | 4 cut(s) | 24, 296, 337, 352 |
| BstMBI | GATC | 4 cut(s) | 21, 293, 334, 349 |
| BstNSI | RCATGY | 2 cut(s) | 391, 413 |
| BstUI | CGCG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 1 cut(s) | 406 |
| BstX2I | RGATCY | 2 cut(s) | 334, 349 |
| BstYI | RGATCY | 2 cut(s) | 334, 349 |
| BtsCI | GGATG | 1 cut(s) | 400 |
| BtsIMutI | CAGTG | 1 cut(s) | 108 |
| CaiI | CAGNNNCTG | 1 cut(s) | 337 |
| Csp6I | GTAC | 2 cut(s) | 361, 402 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 141, 176 |
| CviAII | CATG | 3 cut(s) | 388, 410, 416 |
| CviJI | RGCY | 3 cut(s) | 134, 177, 367 |
| CviKI_1 | RGCY | 3 cut(s) | 134, 177, 367 |
| CviQI | GTAC | 2 cut(s) | 361, 402 |
| DpnI | GATC | 4 cut(s) | 23, 295, 336, 351 |
| DpnII | GATC | 4 cut(s) | 21, 293, 334, 349 |
| FaeI | CATG | 3 cut(s) | 391, 413, 419 |
| FaiI | YATR | 3 cut(s) | 389, 411, 417 |
| FatI | CATG | 3 cut(s) | 387, 409, 415 |
| Fnu4HI | GCNGC | 1 cut(s) | 420 |
| FokI | GGATG | 1 cut(s) | 407 |
| Fsp4HI | GCNGC | 1 cut(s) | 420 |
| GluI | GCNGC | 1 cut(s) | 420 |
| Hin1II | CATG | 3 cut(s) | 391, 413, 419 |
| HincII | GTYRAC | 1 cut(s) | 88 |
| HindII | GTYRAC | 1 cut(s) | 88 |
| HinfI | GANTC | 1 cut(s) | 192 |
| HpaI | GTTAAC | 1 cut(s) | 88 |
| Hpy166II | GTNNAC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 2 cut(s) | 197, 339 |
| Hpy188III | TCNNGA | 6 cut(s) | 73, 137, 248, 257, 332, 353 |
| Hpy8I | GTNNAC | 1 cut(s) | 88 |
| HpyCH4III | ACNGT | 3 cut(s) | 112, 221, 324 |
| HpyCH4IV | ACGT | 2 cut(s) | 183, 375 |
| HpyCH4V | TGCA | 1 cut(s) | 64 |
| HpySE526I | ACGT | 2 cut(s) | 183, 375 |
| Hsp92II | CATG | 3 cut(s) | 391, 413, 419 |
| KspAI | GTTAAC | 1 cut(s) | 88 |
| Kzo9I | GATC | 4 cut(s) | 21, 293, 334, 349 |
| LpnPI | CCDG | 7 cut(s) | 58, 104, 122, 168, 261, 317, 366 |
| Lsp1109I | GCAGC | 1 cut(s) | 406 |
| MaeII | ACGT | 2 cut(s) | 183, 375 |
| MaeIII | GTNAC | 1 cut(s) | 104 |
| MalI | GATC | 4 cut(s) | 23, 295, 336, 351 |
| MboI | GATC | 4 cut(s) | 21, 293, 334, 349 |
| MboII | GAAGA | 1 cut(s) | 92 |
| MfeI | CAATTG | 1 cut(s) | 302 |
| MflI | RGATCY | 2 cut(s) | 334, 349 |
| MluCI | AATT | 1 cut(s) | 302 |
| MmeI | TCCRAC | 1 cut(s) | 372 |
| MnlI | CCTC | 1 cut(s) | 4 |
| MseI | TTAA | 2 cut(s) | 87, 180 |
| MslI | CAYNNNNRTG | 1 cut(s) | 414 |
| MunI | CAATTG | 1 cut(s) | 302 |
| MvnI | CGCG | 1 cut(s) | 51 |
| NdeII | GATC | 4 cut(s) | 21, 293, 334, 349 |
| NlaIII | CATG | 3 cut(s) | 391, 413, 419 |
| NlaIV | GGNNCC | 1 cut(s) | 351 |
| NspI | RCATGY | 2 cut(s) | 391, 413 |
| NspV | TTCGAA | 1 cut(s) | 129 |
| PfeI | GAWTC | 1 cut(s) | 192 |
| PkrI | GCNGC | 1 cut(s) | 421 |
| Psp1406I | AACGTT | 1 cut(s) | 183 |
| PspN4I | GGNNCC | 1 cut(s) | 351 |
| PstNI | CAGNNNCTG | 1 cut(s) | 337 |
| PsuI | RGATCY | 2 cut(s) | 334, 349 |
| RsaI | GTAC | 2 cut(s) | 362, 403 |
| RsaNI | GTAC | 2 cut(s) | 361, 402 |
| RseI | CAYNNNNRTG | 1 cut(s) | 414 |
| SaqAI | TTAA | 2 cut(s) | 87, 180 |
| SatI | GCNGC | 1 cut(s) | 420 |
| Sau3AI | GATC | 4 cut(s) | 21, 293, 334, 349 |
| SetI | ASST | 5 cut(s) | 93, 122, 136, 186, 378 |
| SfuI | TTCGAA | 1 cut(s) | 129 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 414 |
| Sse9I | AATT | 1 cut(s) | 302 |
| TaaI | ACNGT | 3 cut(s) | 112, 221, 324 |
| TaiI | ACGT | 2 cut(s) | 186, 378 |
| TaqI | TCGA | 2 cut(s) | 129, 258 |
| TasI | AATT | 1 cut(s) | 302 |
| TatI | WGTACW | 1 cut(s) | 360 |
| TfiI | GAWTC | 1 cut(s) | 192 |
| Tru1I | TTAA | 2 cut(s) | 87, 180 |
| Tru9I | TTAA | 2 cut(s) | 87, 180 |
| TscAI | CASTG | 1 cut(s) | 115 |
| TseI | GCWGC | 1 cut(s) | 419 |
| TspDTI | ATGAA | 1 cut(s) | 229 |
| TspRI | CASTG | 1 cut(s) | 115 |
| XceI | RCATGY | 2 cut(s) | 391, 413 |