DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 230 |
| AgsI | TTSAA | 5 cut(s) | 29, 124, 157, 185, 230 |
| AluBI | AGCT | 2 cut(s) | 77, 148 |
| AluI | AGCT | 2 cut(s) | 77, 148 |
| AoxI | GGCC | 1 cut(s) | 70 |
| ApeKI | GCWGC | 1 cut(s) | 64 |
| ApoI | RAATTY | 1 cut(s) | 230 |
| AspS9I | GGNCC | 1 cut(s) | 259 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| AvaII | GGWCC | 1 cut(s) | 259 |
| BbvI | GCAGC | 1 cut(s) | 76 |
| BciVI | GTATCC | 1 cut(s) | 294 |
| BclI | TGATCA | 1 cut(s) | 133 |
| BfuI | GTATCC | 1 cut(s) | 294 |
| BisI | GCNGC | 1 cut(s) | 65 |
| BlsI | GCNGC | 1 cut(s) | 66 |
| Bme18I | GGWCC | 1 cut(s) | 259 |
| BmgT120I | GGNCC | 1 cut(s) | 259 |
| BmrI | ACTGGG | 1 cut(s) | 173 |
| BmsI | GCATC | 1 cut(s) | 51 |
| BmuI | ACTGGG | 1 cut(s) | 173 |
| BpuEI | CTTGAG | 1 cut(s) | 85 |
| Bse1I | ACTGG | 1 cut(s) | 179 |
| BseNI | ACTGG | 1 cut(s) | 179 |
| BseXI | GCAGC | 1 cut(s) | 76 |
| BshFI | GGCC | 1 cut(s) | 72 |
| BsnI | GGCC | 1 cut(s) | 72 |
| Bsp143I | GATC | 1 cut(s) | 133 |
| BspANI | GGCC | 1 cut(s) | 72 |
| BsrI | ACTGG | 1 cut(s) | 179 |
| BssMI | GATC | 1 cut(s) | 133 |
| BstKTI | GATC | 1 cut(s) | 136 |
| BstMBI | GATC | 1 cut(s) | 133 |
| BstNSI | RCATGY | 1 cut(s) | 20 |
| BstV1I | GCAGC | 1 cut(s) | 76 |
| BsuI | GTATCC | 1 cut(s) | 294 |
| BsuRI | GGCC | 1 cut(s) | 72 |
| BtsIMutI | CAGTG | 1 cut(s) | 241 |
| Cfr13I | GGNCC | 1 cut(s) | 259 |
| CviAII | CATG | 1 cut(s) | 17 |
| CviJI | RGCY | 3 cut(s) | 72, 77, 148 |
| CviKI_1 | RGCY | 3 cut(s) | 72, 77, 148 |
| DpnI | GATC | 1 cut(s) | 135 |
| DpnII | GATC | 1 cut(s) | 133 |
| DraI | TTTAAA | 1 cut(s) | 51 |
| Eco32I | GATATC | 1 cut(s) | 85 |
| Eco47I | GGWCC | 1 cut(s) | 259 |
| EcoRI | GAATTC | 1 cut(s) | 230 |
| EcoRV | GATATC | 1 cut(s) | 85 |
| FaeI | CATG | 1 cut(s) | 20 |
| FaiI | YATR | 6 cut(s) | 14, 18, 42, 81, 296, 298 |
| FatI | CATG | 1 cut(s) | 16 |
| FbaI | TGATCA | 1 cut(s) | 133 |
| Fnu4HI | GCNGC | 1 cut(s) | 65 |
| Fsp4HI | GCNGC | 1 cut(s) | 65 |
| GluI | GCNGC | 1 cut(s) | 65 |
| HaeIII | GGCC | 1 cut(s) | 72 |
| Hin1II | CATG | 1 cut(s) | 20 |
| HinfI | GANTC | 1 cut(s) | 113 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy166II | GTNNAC | 1 cut(s) | 174 |
| Hpy188I | TCNGA | 1 cut(s) | 273 |
| Hpy188III | TCNNGA | 2 cut(s) | 102, 227 |
| Hpy8I | GTNNAC | 1 cut(s) | 174 |
| HpyAV | CCTTC | 2 cut(s) | 98, 233 |
| HpyCH4V | TGCA | 1 cut(s) | 64 |
| Hsp92II | CATG | 1 cut(s) | 20 |
| Ksp22I | TGATCA | 1 cut(s) | 133 |
| Kzo9I | GATC | 1 cut(s) | 133 |
| LpnPI | CCDG | 1 cut(s) | 192 |
| Lsp1109I | GCAGC | 1 cut(s) | 76 |
| LweI | GCATC | 1 cut(s) | 51 |
| MalI | GATC | 1 cut(s) | 135 |
| MboI | GATC | 1 cut(s) | 133 |
| MboII | GAAGA | 3 cut(s) | 41, 119, 197 |
| MluCI | AATT | 1 cut(s) | 230 |
| MnlI | CCTC | 1 cut(s) | 45 |
| MseI | TTAA | 1 cut(s) | 50 |
| MspA1I | CMGCKG | 1 cut(s) | 148 |
| NdeII | GATC | 1 cut(s) | 133 |
| NlaIII | CATG | 1 cut(s) | 20 |
| NmeAIII | GCCGAG | 1 cut(s) | 98 |
| NspI | RCATGY | 1 cut(s) | 20 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 205 |
| PfeI | GAWTC | 1 cut(s) | 113 |
| PkrI | GCNGC | 1 cut(s) | 66 |
| PspPI | GGNCC | 1 cut(s) | 259 |
| PvuII | CAGCTG | 1 cut(s) | 148 |
| SaqAI | TTAA | 1 cut(s) | 50 |
| SatI | GCNGC | 1 cut(s) | 65 |
| Sau3AI | GATC | 1 cut(s) | 133 |
| Sau96I | GGNCC | 1 cut(s) | 259 |
| SetI | ASST | 4 cut(s) | 37, 79, 150, 225 |
| SfaNI | GCATC | 1 cut(s) | 51 |
| SgeI | CNNG | 9 cut(s) | 29, 70, 80, 86, 114, 191, 210, 219, 239 |
| SinI | GGWCC | 1 cut(s) | 259 |
| SmlI | CTYRAG | 1 cut(s) | 100 |
| SmoI | CTYRAG | 1 cut(s) | 100 |
| Sse9I | AATT | 1 cut(s) | 230 |
| TasI | AATT | 1 cut(s) | 230 |
| TfiI | GAWTC | 1 cut(s) | 113 |
| Tru1I | TTAA | 1 cut(s) | 50 |
| Tru9I | TTAA | 1 cut(s) | 50 |
| TscAI | CASTG | 1 cut(s) | 241 |
| TseI | GCWGC | 1 cut(s) | 64 |
| TspDTI | ATGAA | 1 cut(s) | 80 |
| TspRI | CASTG | 1 cut(s) | 241 |
| VpaK11BI | GGWCC | 1 cut(s) | 259 |
| XapI | RAATTY | 1 cut(s) | 230 |
| XceI | RCATGY | 1 cut(s) | 20 |