DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 415 |
| AcsI | RAATTY | 2 cut(s) | 31, 275 |
| AfaI | GTAC | 2 cut(s) | 13, 464 |
| AgsI | TTSAA | 6 cut(s) | 23, 140, 145, 256, 451, 653 |
| AluBI | AGCT | 2 cut(s) | 290, 659 |
| AluI | AGCT | 2 cut(s) | 290, 659 |
| Alw26I | GTCTC | 1 cut(s) | 392 |
| Ama87I | CYCGRG | 1 cut(s) | 200 |
| ApeKI | GCWGC | 2 cut(s) | 222, 611 |
| ApoI | RAATTY | 2 cut(s) | 31, 275 |
| AseI | ATTAAT | 1 cut(s) | 405 |
| AsuHPI | GGTGA | 1 cut(s) | 448 |
| AvaI | CYCGRG | 1 cut(s) | 200 |
| BbsI | GAAGAC | 1 cut(s) | 212 |
| BbvI | GCAGC | 2 cut(s) | 209, 623 |
| BccI | CCATC | 1 cut(s) | 490 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 98, 132 |
| BciVI | GTATCC | 1 cut(s) | 171 |
| BcoDI | GTCTC | 1 cut(s) | 392 |
| BfaI | CTAG | 1 cut(s) | 381 |
| BfmI | CTRYAG | 2 cut(s) | 234, 248 |
| BfuI | GTATCC | 1 cut(s) | 171 |
| BisI | GCNGC | 2 cut(s) | 223, 612 |
| BlsI | GCNGC | 2 cut(s) | 224, 613 |
| BmeT110I | CYCGRG | 1 cut(s) | 200 |
| BmsI | GCATC | 1 cut(s) | 653 |
| BpiI | GAAGAC | 1 cut(s) | 212 |
| BpmI | CTGGAG | 1 cut(s) | 312 |
| BpuEI | CTTGAG | 1 cut(s) | 48 |
| Bse1I | ACTGG | 3 cut(s) | 444, 492, 639 |
| BseNI | ACTGG | 3 cut(s) | 444, 492, 639 |
| BseXI | GCAGC | 2 cut(s) | 209, 623 |
| BsgI | GTGCAG | 1 cut(s) | 462 |
| BsiHKCI | CYCGRG | 1 cut(s) | 200 |
| BslFI | GGGAC | 1 cut(s) | 305 |
| BsmAI | GTCTC | 1 cut(s) | 392 |
| BsmFI | GGGAC | 1 cut(s) | 305 |
| BsmI | GAATGC | 1 cut(s) | 201 |
| BsoBI | CYCGRG | 1 cut(s) | 200 |
| Bsp1407I | TGTACA | 1 cut(s) | 11 |
| Bsp143I | GATC | 1 cut(s) | 295 |
| BspMAI | CTGCAG | 1 cut(s) | 252 |
| BsrGI | TGTACA | 1 cut(s) | 11 |
| BsrI | ACTGG | 3 cut(s) | 444, 492, 639 |
| BssMI | GATC | 1 cut(s) | 295 |
| Bst4CI | ACNGT | 2 cut(s) | 230, 329 |
| BstAUI | TGTACA | 1 cut(s) | 11 |
| BstC8I | GCNNGC | 1 cut(s) | 477 |
| BstDEI | CTNAG | 1 cut(s) | 558 |
| BstKTI | GATC | 1 cut(s) | 298 |
| BstMAI | GTCTC | 1 cut(s) | 392 |
| BstMBI | GATC | 1 cut(s) | 295 |
| BstNSI | RCATGY | 1 cut(s) | 134 |
| BstSFI | CTRYAG | 2 cut(s) | 234, 248 |
| BstV1I | GCAGC | 2 cut(s) | 209, 623 |
| BstV2I | GAAGAC | 1 cut(s) | 212 |
| BsuI | GTATCC | 1 cut(s) | 171 |
| BtsIMutI | CAGTG | 1 cut(s) | 646 |
| Cac8I | GCNNGC | 1 cut(s) | 477 |
| Csp6I | GTAC | 2 cut(s) | 12, 463 |
| CviAII | CATG | 3 cut(s) | 9, 131, 594 |
| CviJI | RGCY | 3 cut(s) | 222, 290, 659 |
| CviKI_1 | RGCY | 3 cut(s) | 222, 290, 659 |
| CviQI | GTAC | 2 cut(s) | 12, 463 |
| DdeI | CTNAG | 1 cut(s) | 558 |
| DpnI | GATC | 1 cut(s) | 297 |
| DpnII | GATC | 1 cut(s) | 295 |
| Eco88I | CYCGRG | 1 cut(s) | 200 |
| FaeI | CATG | 3 cut(s) | 12, 134, 597 |
| FaqI | GGGAC | 1 cut(s) | 305 |
| FatI | CATG | 3 cut(s) | 8, 130, 593 |
| FblI | GTMKAC | 1 cut(s) | 415 |
| Fnu4HI | GCNGC | 2 cut(s) | 223, 612 |
| Fsp4HI | GCNGC | 2 cut(s) | 223, 612 |
| FspBI | CTAG | 1 cut(s) | 381 |
| GluI | GCNGC | 2 cut(s) | 223, 612 |
| GsuI | CTGGAG | 1 cut(s) | 312 |
| Hin1II | CATG | 3 cut(s) | 12, 134, 597 |
| HincII | GTYRAC | 1 cut(s) | 391 |
| HindII | GTYRAC | 1 cut(s) | 391 |
| HindIII | AAGCTT | 1 cut(s) | 657 |
| HinfI | GANTC | 2 cut(s) | 89, 256 |
| HphI | GGTGA | 1 cut(s) | 448 |
| Hpy166II | GTNNAC | 2 cut(s) | 391, 416 |
| Hpy188III | TCNNGA | 6 cut(s) | 41, 192, 202, 332, 349, 518 |
| Hpy8I | GTNNAC | 2 cut(s) | 391, 416 |
| HpyCH4III | ACNGT | 2 cut(s) | 230, 329 |
| HpyCH4V | TGCA | 7 cut(s) | 109, 225, 250, 479, 504, 597, 644 |
| HpyF3I | CTNAG | 1 cut(s) | 558 |
| Hsp92II | CATG | 3 cut(s) | 12, 134, 597 |
| Kzo9I | GATC | 1 cut(s) | 295 |
| LmnI | GCTCC | 1 cut(s) | 304 |
| Lsp1109I | GCAGC | 2 cut(s) | 209, 623 |
| LweI | GCATC | 1 cut(s) | 653 |
| MaeI | CTAG | 1 cut(s) | 381 |
| MaeIII | GTNAC | 2 cut(s) | 172, 358 |
| MalI | GATC | 1 cut(s) | 297 |
| MboI | GATC | 1 cut(s) | 295 |
| MboII | GAAGA | 2 cut(s) | 217, 469 |
| MfeI | CAATTG | 2 cut(s) | 140, 648 |
| MluCI | AATT | 7 cut(s) | 18, 31, 140, 275, 546, 602, 648 |
| MnlI | CCTC | 1 cut(s) | 429 |
| MseI | TTAA | 3 cut(s) | 405, 605, 661 |
| MunI | CAATTG | 2 cut(s) | 140, 648 |
| Mva1269I | GAATGC | 1 cut(s) | 201 |
| NdeII | GATC | 1 cut(s) | 295 |
| NlaIII | CATG | 3 cut(s) | 12, 134, 597 |
| NmuCI | GTSAC | 1 cut(s) | 358 |
| NspI | RCATGY | 1 cut(s) | 134 |
| PaeR7I | CTCGAG | 1 cut(s) | 200 |
| PctI | GAATGC | 1 cut(s) | 201 |
| PfeI | GAWTC | 2 cut(s) | 89, 256 |
| PkrI | GCNGC | 2 cut(s) | 224, 613 |
| PshBI | ATTAAT | 1 cut(s) | 405 |
| PstI | CTGCAG | 1 cut(s) | 252 |
| RsaI | GTAC | 2 cut(s) | 13, 464 |
| RsaNI | GTAC | 2 cut(s) | 12, 463 |
| SaqAI | TTAA | 3 cut(s) | 405, 605, 661 |
| SatI | GCNGC | 2 cut(s) | 223, 612 |
| Sau3AI | GATC | 1 cut(s) | 295 |
| SetI | ASST | 5 cut(s) | 187, 292, 390, 421, 661 |
| SfaNI | GCATC | 1 cut(s) | 653 |
| SfcI | CTRYAG | 2 cut(s) | 234, 248 |
| Sfr274I | CTCGAG | 1 cut(s) | 200 |
| SlaI | CTCGAG | 1 cut(s) | 200 |
| SmlI | CTYRAG | 2 cut(s) | 63, 200 |
| SmoI | CTYRAG | 2 cut(s) | 63, 200 |
| Sse9I | AATT | 7 cut(s) | 18, 31, 140, 275, 546, 602, 648 |
| SspMI | CTAG | 1 cut(s) | 381 |
| TaaI | ACNGT | 2 cut(s) | 230, 329 |
| TaqI | TCGA | 1 cut(s) | 201 |
| TasI | AATT | 7 cut(s) | 18, 31, 140, 275, 546, 602, 648 |
| TatI | WGTACW | 2 cut(s) | 11, 462 |
| TfiI | GAWTC | 2 cut(s) | 89, 256 |
| Tru1I | TTAA | 3 cut(s) | 405, 605, 661 |
| Tru9I | TTAA | 3 cut(s) | 405, 605, 661 |
| TscAI | CASTG | 1 cut(s) | 646 |
| TseFI | GTSAC | 1 cut(s) | 358 |
| TseI | GCWGC | 2 cut(s) | 222, 611 |
| Tsp45I | GTSAC | 1 cut(s) | 358 |
| TspDTI | ATGAA | 2 cut(s) | 423, 499 |
| TspRI | CASTG | 1 cut(s) | 646 |
| VspI | ATTAAT | 1 cut(s) | 405 |
| XapI | RAATTY | 2 cut(s) | 31, 275 |
| XceI | RCATGY | 1 cut(s) | 134 |
| XhoI | CTCGAG | 1 cut(s) | 200 |
| XmiI | GTMKAC | 1 cut(s) | 415 |
| XspI | CTAG | 1 cut(s) | 381 |