DNA recombination
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 294 |
| AfaI | GTAC | 1 cut(s) | 118 |
| AflIII | ACRYGT | 1 cut(s) | 122 |
| AgsI | TTSAA | 1 cut(s) | 353 |
| ApoI | RAATTY | 1 cut(s) | 294 |
| BbsI | GAAGAC | 1 cut(s) | 135 |
| BccI | CCATC | 1 cut(s) | 89 |
| BfaI | CTAG | 1 cut(s) | 14 |
| BfmI | CTRYAG | 1 cut(s) | 417 |
| BmsI | GCATC | 1 cut(s) | 83 |
| BpiI | GAAGAC | 1 cut(s) | 135 |
| BpmI | CTGGAG | 1 cut(s) | 267 |
| BseGI | GGATG | 1 cut(s) | 135 |
| BsgI | GTGCAG | 1 cut(s) | 216 |
| BspHI | TCATGA | 1 cut(s) | 151 |
| BstF5I | GGATG | 1 cut(s) | 135 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstNSI | RCATGY | 1 cut(s) | 126 |
| BstSFI | CTRYAG | 1 cut(s) | 417 |
| BstV2I | GAAGAC | 1 cut(s) | 135 |
| BtsCI | GGATG | 1 cut(s) | 135 |
| BtsI | GCAGTG | 1 cut(s) | 228 |
| BtsIMutI | CAGTG | 1 cut(s) | 228 |
| CciI | TCATGA | 1 cut(s) | 151 |
| Csp6I | GTAC | 1 cut(s) | 117 |
| CviAII | CATG | 3 cut(s) | 37, 123, 152 |
| CviJI | RGCY | 3 cut(s) | 13, 80, 301 |
| CviKI_1 | RGCY | 3 cut(s) | 13, 80, 301 |
| CviQI | GTAC | 1 cut(s) | 117 |
| EcoRI | GAATTC | 1 cut(s) | 294 |
| FaeI | CATG | 3 cut(s) | 40, 126, 155 |
| FaiI | YATR | 7 cut(s) | 38, 86, 124, 153, 167, 261, 382 |
| FatI | CATG | 3 cut(s) | 36, 122, 151 |
| FokI | GGATG | 1 cut(s) | 122 |
| FspBI | CTAG | 1 cut(s) | 14 |
| GsuI | CTGGAG | 1 cut(s) | 267 |
| Hin1II | CATG | 3 cut(s) | 40, 126, 155 |
| HinfI | GANTC | 5 cut(s) | 33, 280, 353, 422, 434 |
| Hpy166II | GTNNAC | 1 cut(s) | 275 |
| Hpy188I | TCNGA | 3 cut(s) | 188, 361, 442 |
| Hpy188III | TCNNGA | 2 cut(s) | 139, 152 |
| Hpy8I | GTNNAC | 1 cut(s) | 275 |
| HpyAV | CCTTC | 2 cut(s) | 188, 336 |
| HpyCH4IV | ACGT | 1 cut(s) | 452 |
| HpyCH4V | TGCA | 4 cut(s) | 47, 233, 329, 431 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpySE526I | ACGT | 1 cut(s) | 452 |
| Hsp92II | CATG | 3 cut(s) | 40, 126, 155 |
| LpnPI | CCDG | 5 cut(s) | 99, 152, 189, 197, 297 |
| LweI | GCATC | 1 cut(s) | 83 |
| MaeI | CTAG | 1 cut(s) | 14 |
| MaeII | ACGT | 1 cut(s) | 452 |
| MaeIII | GTNAC | 1 cut(s) | 40 |
| MboII | GAAGA | 2 cut(s) | 140, 455 |
| MluCI | AATT | 1 cut(s) | 294 |
| MlyI | GAGTC | 2 cut(s) | 274, 428 |
| MnlI | CCTC | 3 cut(s) | 97, 143, 313 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NlaIII | CATG | 3 cut(s) | 40, 126, 155 |
| NspI | RCATGY | 1 cut(s) | 126 |
| PagI | TCATGA | 1 cut(s) | 151 |
| PciI | ACATGT | 1 cut(s) | 122 |
| PfeI | GAWTC | 3 cut(s) | 33, 353, 422 |
| PleI | GAGTC | 2 cut(s) | 274, 428 |
| PpsI | GAGTC | 2 cut(s) | 274, 428 |
| PscI | ACATGT | 1 cut(s) | 122 |
| RsaI | GTAC | 1 cut(s) | 118 |
| RsaNI | GTAC | 1 cut(s) | 117 |
| SchI | GAGTC | 2 cut(s) | 274, 428 |
| SetI | ASST | 2 cut(s) | 135, 455 |
| SfaNI | GCATC | 1 cut(s) | 83 |
| SfcI | CTRYAG | 1 cut(s) | 417 |
| Sse9I | AATT | 1 cut(s) | 294 |
| SspMI | CTAG | 1 cut(s) | 14 |
| TaiI | ACGT | 1 cut(s) | 455 |
| TaqI | TCGA | 1 cut(s) | 219 |
| TasI | AATT | 1 cut(s) | 294 |
| TfiI | GAWTC | 3 cut(s) | 33, 353, 422 |
| TscAI | CASTG | 1 cut(s) | 235 |
| TspDTI | ATGAA | 3 cut(s) | 25, 75, 84 |
| TspRI | CASTG | 1 cut(s) | 235 |
| XapI | RAATTY | 1 cut(s) | 294 |
| XceI | RCATGY | 1 cut(s) | 126 |
| XspI | CTAG | 1 cut(s) | 14 |